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Mobile biosafety level (BSL) 2 laboratories deployment: Strengthening the diagnostic facilities in Pakistan with emerging public health challenges and the way forward 移动生物安全级别(BSL) 2实验室部署:加强巴基斯坦的诊断设施,应对新出现的公共卫生挑战和前进方向
Q1 Social Sciences Pub Date : 2023-06-01 DOI: 10.1016/j.jobb.2023.05.002
Shamsul Arfin Qasmi , Aamer Ikram , Muhammad Tariq , Muhammad Tahir Khadim , Nabeel Ahmed Maqbool

Availability of mobile laboratories can facilitate rapid on-spot detection of pathogens, monitor its presence in certain populations and inform health authorities to take immediate remedial measures. Currently available biosafety and biosecurity guidelines and policies may not completely articulate the increased demand to manage mobile units in infectious disease outbreaks in remote parts of the country for rapid diagnosis, and also allows research and epidemiological study take place appropriately.

The main objective of this study is to evaluate the current limitations and develop and implement biosafety and biosecurity guidelines as well as the protocols for operations, security, and response plan of mobile biosafety level 2 laboratories and their deployment.

Keeping in view the sensitivity of it, a comprehensive plan was developed to address it in view of Global Health Security framework. Biosafety and biosecurity protocols were developed including Risk Assessment Tool (RAT) fitting the needs and strengthen the diagnostic and epidemiological capacity in the field covering remote parts of country to fill the gaps observed during the COVID-19 pandemic.

Currently the biosafety and biosecurity best practices guidelines and biosecurity policy and regulations are directed mostly towards static laboratories. A biosafety and biosecurity manual developed to adopt and meet the requirements for MBSL 2. For acute health infectious threats including the COVID-19 outbreak and other epidemics, rapid diagnosis can curb and mitigate the problem before it gets out of its boundaries creating significant health risks for the public and economy. The deployment of mobile laboratories will certainly help in curbing these catastrophes.

提供流动实验室可促进快速现场检测病原体,监测其在某些人群中的存在情况,并通知卫生当局立即采取补救措施。现有的生物安全和生物保障准则和政策可能无法完全阐明在该国偏远地区传染病暴发时管理流动单位以进行快速诊断的日益增长的需求,并且还允许适当地进行研究和流行病学研究。本研究的主要目的是评估目前的局限性,制定和实施生物安全和生物安保指南,以及移动生物安全二级实验室的操作、安全和响应计划和部署方案。考虑到这一问题的敏感性,根据全球卫生安全框架制定了一项综合计划来解决这一问题。制定了生物安全和生物安保方案,包括符合需求的风险评估工具(RAT),并加强了覆盖该国偏远地区的现场诊断和流行病学能力,以填补COVID-19大流行期间观察到的空白。目前,生物安全和生物安全最佳实践指南以及生物安全政策和法规主要针对静态实验室。制定生物安全和生物保安手册,以采用和满足MBSL 2的要求。对于包括COVID-19疫情和其他流行病在内的急性健康传染性威胁,快速诊断可以在问题超出其对公众和经济造成重大健康风险之前遏制和缓解问题。移动实验室的部署肯定有助于遏制这些灾难。
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引用次数: 0
Efficiency of surface inactivation disinfectants for bacteria studied in an aquaculture microbiology laboratory 水产养殖微生物实验室研究表面灭活消毒剂对细菌的灭活效果
Q1 Social Sciences Pub Date : 2023-06-01 DOI: 10.1016/j.jobb.2023.06.001
Manfred Weidmann

Routine microbial inactivation procedures used in microbiology laboratories must be verified. In this study, the efficacy of surface disinfection using 70% Isopropanol, 0.45% Presept, and 1% Virkon was tested against 24 bacterial strains commonly handled in aquaculture microbiology laboratories. Isopropanol was ineffective against Nocardia asteroides NCIMB 1290, while Virkon was not effective against Aeromonas eucrenophila NCIMB 74 or Pediococcus acidilacti R52037.

必须验证微生物实验室中使用的常规微生物灭活程序。本研究采用70%异丙醇、0.45% Presept和1% Virkon对水产养殖微生物实验室常用的24株细菌进行表面消毒效果试验。异丙醇对小行星诺卡菌NCIMB 1290无效,而Virkon对嗜嗜嗜绿气单胞菌NCIMB 74和嗜酸性Pediococcus R52037无效。
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引用次数: 0
Outbreak of an emerging zoonotic Nipah virus: An emerging concern 新出现的人畜共患尼帕病毒的爆发:一个新出现的关切
Q1 Social Sciences Pub Date : 2023-06-01 DOI: 10.1016/j.jobb.2023.04.002
Diptanu Paul , Aroop Mohanty , Abhishek Shah , Bijaya Kumar Padhi , Ranjit Sah

The Nipah virus (NiV) infection is one of the newly emerging deadly zoonotic diseases which carries a significant weightage of mortality among its victims. Due to the relatively recent history of its emergence and only a few known outbreaks, we cannot predict but foresee its potential to create havoc, which can be far more dreadful than the current ongoing COVID-19 pandemic. Here we have tried to depict the fatal potential of the virus and the increased propensity with which it can spread to rest of the world.

尼帕病毒感染是新出现的致命人畜共患疾病之一,在受害者死亡率中占很大比重。由于其出现的历史相对较近,并且只有几次已知的疫情,我们无法预测但可以预见其造成破坏的潜力,其可能比目前正在进行的COVID-19大流行可怕得多。在这里,我们试图描述这种病毒的致命潜力,以及它向世界其他地区传播的日益增加的倾向。
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引用次数: 2
Epidemiological and comparative genomic analyses of Multidrug-Resistant Acinetobacter baumannii collected between 2020 and 2022 in Liaocheng City, Shandong Province, China 山东省聊城市2020-2022年采集的耐多药鲍曼不动杆菌流行病学及比较基因组分析
Q1 Social Sciences Pub Date : 2023-06-01 DOI: 10.1016/j.jobb.2023.04.001
Fangyuan Cui , Li Liu , Xuefeng Miao , Haiying Qian , Shaocai Lu , Jinjing Tian , Guanhua Qiao , Baobin Shao , Qian Li , Ran Zhang , Shengnan Liang

The emergence and prevalence of multidrug-resistant Acinetobacter baumannii (MRAB) poses a huge challenge to clinical treatment. To investigate the genetic and epidemiologic characteristics of MRAB in Liaocheng, China, and to explore potential resistance mechanisms, 56 MRAB strains were collected from the clinical departments of seven hospitals in Liaocheng between 2020 and 2022. Molecular typing, antimicrobial resistance patterns, and epidemiological characteristics were determined by genome sequencing and comparative genome analysis. Sequence type (ST) 540 was the most prevalent ST of the 56 MRAB in Liaocheng, and most strains (92.86%) were grouped into CC92. Core genome multilocus sequence typing subdivided the strains according to the number of allelic differences and could distinguish different outbreaks caused by ST540 isolates in the hospitals. All the isolates harbored blaOXA-23 and blaADC-25, and at least 92.86% of the isolates were resistant to 10 antibiotics. The major MRAB epidemic clone detected in Liaocheng was ST540, which was different from the results reported in other regions in China. Furthermore, several inter-hospital transmissions of ST540 isolates were observed. The findings highlight the urgent need for effective nosocomial infection control measures and the continuous surveillance of ST540 MRAB in Liaocheng.

耐多药鲍曼不动杆菌(MRAB)的出现和流行给临床治疗带来了巨大的挑战。为了解聊城市地区MRAB的遗传和流行病学特征,探讨其耐药机制,于2020 - 2022年在聊城市7家医院临床科室采集了56株MRAB菌株。通过基因组测序和比较基因组分析确定分子分型、耐药模式和流行病学特征。序列型(ST) 540是聊城56株MRAB中最常见的ST,大部分菌株(92.86%)归为CC92。核心基因组多位点序列分型根据等位基因数量的差异对菌株进行细分,可以区分不同医院暴发的ST540分离株。所有分离株均携带blaOXA-23和blaADC-25,至少92.86%的分离株对10种抗生素耐药。聊城地区检测到的主要MRAB流行克隆为ST540,与国内其他地区报告的结果不同。此外,还观察到几例ST540分离株的医院间传播。研究结果表明,聊城市迫切需要采取有效的医院感染控制措施,并对ST540 MRAB进行持续监测。
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引用次数: 0
The potential epidemic threat of Ebola virus and the development of a preventive vaccine 埃博拉病毒的潜在流行威胁和预防性疫苗的开发
Q1 Social Sciences Pub Date : 2023-06-01 DOI: 10.1016/j.jobb.2023.05.001
Hong-Qing Zhang , Qiu-Yan Zhang , Zhi-Ming Yuan , Bo Zhang

Ebola virus (EBOV) is classified as a category A pathogen as it causes viral hemorrhagic fever, one of the most-deadly virus-related diseases. Since its discovery in 1976, EBOV has caused a number of global public health incidents, which have posed a serious threat to both humans and non-human primates. Thus, numerous preventive vaccine studies are underway, including research on inactivated vaccines, DNA vaccines, subunit vaccines, virus-like particles, Venezuelan equine encephalitis virus replicon particles, and several viral vector vaccines. The vesicular stomatitis virus-based vaccine Ervebo was recently approved by the Food and Drug Administration and the European Union, and several other vaccines have also been proven to confer potent protection in non-human primates against EBOV lethal challenge. This review provides a brief background of EBOV, with a focus on the epidemiology, available animal models, and advances in preventive approaches for EBOV infection.

埃博拉病毒(EBOV)被列为a类病原体,因为它会导致病毒性出血热,这是最致命的病毒相关疾病之一。自1976年发现埃博拉病毒以来,它已引起了若干全球性公共卫生事件,对人类和非人类灵长类动物构成严重威胁。因此,正在进行许多预防性疫苗研究,包括对灭活疫苗、DNA疫苗、亚单位疫苗、病毒样颗粒、委内瑞拉马脑炎病毒复制子颗粒和几种病毒载体疫苗的研究。基于水疱性口炎病毒的疫苗Ervebo最近获得了美国食品和药物管理局和欧盟的批准,其他几种疫苗也已被证明在非人类灵长类动物中对EBOV致命攻击具有有效保护作用。本文简要介绍了EBOV的背景,重点介绍了EBOV感染的流行病学、可用的动物模型以及预防方法的进展。
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引用次数: 0
Corrigendum to “Efficiency of surface inactivation disinfectants for bacteria studied in an aquaculture microbiology laboratory” [J. Biosaf. Biosecurity 5(2) (2023) 84–86] 《水产养殖微生物实验室对细菌表面灭活消毒剂效果的研究》的勘误表[J]。Biosaf。生物安全5(2)(2023)84-86]
Q1 Social Sciences Pub Date : 2023-06-01 DOI: 10.1016/j.jobb.2023.07.001
Manfred Weidmann
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引用次数: 0
Ethical framework on risk governance of synthetic biology 合成生物学风险治理的伦理框架
Q1 Social Sciences Pub Date : 2023-06-01 DOI: 10.1016/j.jobb.2023.03.002
Liao Bohua , Wang Yuexin , Ou Yakun , Zuo Kunlan , Liu Huan , Lei Ruipeng

Synthetic biology is an emerging multidisciplinary field that aims to design and construct new biological systems not found in nature. Whereas synthetic biology may yield tremendous benefits, it may also pose substantial risks to human health and the environment that must be addressed. In this paper, we examined the environmental risks associated with synthetic biology, including changes to or depletion of the environment, competition with native species, horizontal gene transfer, pathogenicity or toxicity, bioterrorism, and laboratory biosecurity. We highlight three approaches for assessing environmental risks in synthetic biology: solution-focused risk assessment, Bayesian networks, and network of networks for sustainable capacity building. An ethical governance framework is proposed to facilitate innovation while minimising risks. This framework emphasises the precautionary principle and balancing stakeholder interests prior to project development and commercialisation. Overall, we underscore the importance and urgency of assessing and managing the environmental risks of synthetic biology to ensure its safe and ethical development and application.

合成生物学是一个新兴的多学科领域,旨在设计和构建自然界中没有的新的生物系统。虽然合成生物学可能产生巨大的利益,但它也可能对人类健康和环境构成重大风险,必须加以解决。在本文中,我们研究了与合成生物学相关的环境风险,包括环境的变化或枯竭、与本地物种的竞争、水平基因转移、致病性或毒性、生物恐怖主义和实验室生物安全。我们强调了合成生物学中评估环境风险的三种方法:以解决方案为重点的风险评估、贝叶斯网络和可持续能力建设网络的网络。提出道德管治框架,以促进创新,同时将风险降至最低。该框架强调预防原则,并在项目开发和商业化之前平衡利益相关者的利益。总之,我们强调评估和管理合成生物学的环境风险的重要性和紧迫性,以确保其安全和合乎道德的发展和应用。
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引用次数: 2
Applications of the One Health concept: Current status in the Middle East “一个健康”概念的应用:中东的现状
Q1 Social Sciences Pub Date : 2023-03-01 DOI: 10.1016/j.jobb.2023.01.001
Laith AL-Eitan, Suhaib Sendyani, Malek Alnemri

Background

The One Health concept (OHC) seeks to improve the health of plants, animals, and humans because improving animal and plant health will increase the capacity for improving human health. Many risks such as plant and animal biotechnology applications have the potential to generate new diseases that can be transmitted to humans. In this way, the health of humans, animals, and plants is interrelated and depends on one another. However, it has been difficult to apply the OHC in some countries, such as those in the Middle East. The absence of financial support in the region is a major hindrance to applying this concept in the region. The application of the OHC requires the support of specialists who can advocate the government for support in launching OHC-related projects. Here, we discuss the OHC in the context of antimicrobial resistance, zoonotic diseases, and biosafety/biosecurity, which are important public health issues. Furthermore, we describe the current status of the OHC in the Middle East and recent research conducted related to this concept. There has been recent international solidarity in the application of the OHC to reduce risks that threaten the health of organisms. Several countries jointly launched the Global Health Security Agenda in 2014 with the aim of realizing a world that is free of infectious disease-related health risks. However, no previous review articles have examined the applications of the OHC in the Middle East region. This article discusses the OHC in terms of its needs and current applications in the Middle East.

Methodology

The following keywords were used in the search: “One Health,” “Middle East,” “medicinal plants,” “viruses,” “rabies,” “MERS,” and “antimicrobial resistance.” Related papers were obtained by searching for these keywords using available search engines, such as PubMed, Google Scholar, and Google search, as well as international organization websites.

Conclusion

The concept of One Health is relatively new and has not been applied in most countries, possibly because the value of this concept for improving human health is not well understood. The key principle defining this concept and its importance is the interdependency of plants, animals, and human health. By applying the OHC, humans can benefit from healthy plants and animals by enhancing their growing conditions, medications, and environments. This would in turn improve general human health by allowing the safe extraction of therapeutics and food resources.

同一个健康概念(OHC)寻求改善植物、动物和人类的健康,因为改善动物和植物健康将增加改善人类健康的能力。植物和动物生物技术应用等许多风险有可能产生可传播给人类的新疾病。通过这种方式,人类、动物和植物的健康是相互关联和依赖的。然而,在一些国家,例如中东国家,OHC的应用一直很困难。该区域缺乏财政支持是在该区域应用这一概念的主要障碍。OHC的应用需要专家的支持,专家可以倡导政府支持启动OHC相关项目。在此,我们讨论在抗菌素耐药性、人畜共患疾病和生物安全/生物安全的背景下的OHC,这是重要的公共卫生问题。此外,我们还描述了中东地区热含量的现状以及最近进行的与这一概念相关的研究。最近,国际社会在应用OHC减少威胁生物体健康的风险方面表现出团结一致的态度。2014年,一些国家联合发起了《全球卫生安全议程》,旨在实现一个没有传染病相关健康风险的世界。但是,以前没有一篇审查文章审查了OHC在中东区域的应用。本文就热盐在中东地区的需求和应用现状进行了探讨。方法使用以下关键词进行搜索:“同一个健康”、“中东”、“药用植物”、“病毒”、“狂犬病”、“中东呼吸综合征”和“抗菌素耐药性”。通过现有的PubMed、Google Scholar、Google search等搜索引擎以及国际组织网站对这些关键词进行检索,获得相关论文。结论“同一个健康”的概念相对较新,在大多数国家尚未得到应用,可能是因为人们对这一概念对改善人类健康的价值还没有很好地了解。定义这一概念及其重要性的关键原则是植物、动物和人类健康的相互依存关系。通过应用OHC,人类可以通过改善植物和动物的生长条件、药物和环境,从健康的植物和动物中受益。这将反过来通过允许安全提取治疗药物和食物资源来改善一般人类健康。
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引用次数: 5
Potential threat of human pathogenic orthopoxviruses to public health and control strategies 人致病性正痘病毒对公共卫生的潜在威胁及控制策略
Q1 Social Sciences Pub Date : 2023-03-01 DOI: 10.1016/j.jobb.2022.12.004
Yongli Zhang , Yuan Zhou , Rongjuan Pei , Xinwen Chen , Yun Wang

Orthopoxviruses (OPXVs) belong to a group of nucleo-cytoplasmic large DNA viruses. Human pathogenic OPXVs (hpOPXVs) include at least five viruses, among which smallpox virus and monkeypox virus are the most dangerous viral pathogens. Both viruses are classified as category-one human infectious pathogens in China. Although smallpox was globally eradicated in the 1980 s, it is still a top biosecurity threat owing to the possibility of either being leaked to the outside world from a laboratory or being weaponized by terrorists. Beginning in early May 2022, a sudden outbreak of monkeypox was concurrently reported in more than 100 disparate geographical areas, representing a public health emergency of international concern, as declared by the World Health Organization (WHO). In this review, we present the reasons for hpOPXVs such as monkeypox virus presenting a potential threat to public health. We then systematically review the historical and recent development of vaccines and drugs against smallpox and monkeypox. In the final section, we highlight the importance of viromics studies as an integral part of a forward defense strategy to eliminate the potential threat to public health from emerging or re-emerging hpOPXVs and their variants.

正痘病毒(OPXVs)是一类核胞质大DNA病毒。人致病性OPXVs (hpOPXVs)包括至少五种病毒,其中天花病毒和猴痘病毒是最危险的病毒病原体。这两种病毒在中国都被列为一类人类传染性病原体。虽然天花在20世纪80年代在全球范围内被根除,但由于可能从实验室泄露给外部世界或被恐怖分子武器化,它仍然是一个最大的生物安全威胁。从2022年5月初开始,在100多个不同的地理区域同时报告了猴痘的突然暴发,这是世界卫生组织(世卫组织)宣布的国际关注的突发公共卫生事件。在这篇综述中,我们介绍了猴痘病毒等hpopxv对公众健康构成潜在威胁的原因。然后,我们系统地回顾了天花和猴痘疫苗和药物的历史和最近的发展。在最后一节中,我们强调了病毒组学研究作为前沿防御策略的重要组成部分,以消除新出现或再出现的hpopxv及其变体对公众健康的潜在威胁。
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引用次数: 0
A simple and effective aerosol pathogen disinfection test for a flowing air disinfector 流动空气消毒器简单有效的气溶胶病原体消毒试验
Q1 Social Sciences Pub Date : 2023-03-01 DOI: 10.1016/j.jobb.2023.02.001
Xuling Liu , Zhiran Qin , Linqing Wang , Xiaoting Xie , Yifang Fu , Jianhai Yu , Zuxin Liang , Xiaoen He , Jingshu Li , Hong Dai , Jinxiu Yao , Qinghua Wu , Weiwei Xiao , Li Zhu , Chengsong Wan , Bao Zhang , Wei Zhao

Aerosol transmission is an important disease transmission route and has been especially pertinent to hospital and biosafety laboratories during the SARS-CoV-2 pandemic. The thermal resistance of airborne SARS-CoV-2 is lower than that of Bacillus subtilis spores, which are often used to test the effectiveness of SARS-CoV-2 and other pathogen disinfection methods. Herein, we propose a new method to test the disinfection ability of a flowing air disinfector (a digital electromagnetic induction air heater) using B. subtilis spores. The study provides an alternative air disinfection test method. The new test system combined an aerosol generator and a respiratory filter designed in-house and could effectively recover spores on the filter membrane at the air outlet after passing through the flowing air disinfector. The total number of bacterial spores used in the test was within the range of 5 × 105–5 × 106 colony-forming units (CFUs) specified in the technical standard for disinfection. The calculation was based on the calculation method in Air Disinfection Effect Appraisal Test in Technical Standard for Disinfection (2002 Edition). At an air speed of 3.5 m/s, we used a digital electromagnetic induction air heater to disinfect flowing air containing 4.100 × 106 CFUs of B. subtilis spores and determined that the minimum disinfection temperature was 350 °C for a killing rate of 99.99%. At 400 °C, additional experiments using higher spore concentrations (4.700 × 106 ± 1.871 × 105 CFU) and a higher airspeed (4 m/s) showed that the killing rate remained>99.99%. B. subtilis spores, as a biological indicator for testing the efficiency of dry-heat sterilization, were killed by the high temperatures used in this system. The proposed method used to test the flowing air disinfector is simple, stable, and effective. This study provides a reference for the development of test systems that can assess the disinfection ability of flowing air disinfectors.

在SARS-CoV-2大流行期间,气溶胶传播是一种重要的疾病传播途径,与医院和生物安全实验室尤其相关。空气传播的SARS-CoV-2的耐热性低于枯草芽孢杆菌孢子的耐热性,枯草芽孢杆菌孢子常被用来检验SARS-CoV-2和其他病原体消毒方法的有效性。在此,我们提出了一种使用枯草芽孢杆菌孢子测试流动空气消毒器(数字电磁感应空气加热器)消毒能力的新方法。本研究提供了一种可替代的空气消毒试验方法。新的测试系统结合了一个气溶胶发生器和一个自主设计的呼吸过滤器,在通过流动空气消毒器后,可以有效地回收出风口过滤膜上的孢子。试验使用的细菌孢子总数在消毒技术标准规定的5 × 105 ~ 5 × 106菌落形成单位(CFUs)范围内。计算方法参照2002年版《消毒技术标准》空气消毒效果评价试验中的计算方法。在3.5 m/s风速下,采用数字式电磁感应空气加热器对含有4.100 × 106 CFUs枯草芽孢杆菌孢子的流动空气进行消毒,最低消毒温度为350℃,杀菌率为99.99%。在400℃条件下,采用更高的孢子浓度(4.700 × 106±1.871 × 105 CFU)和更高的空速(4 m/s)进行实验,杀虫率保持在99.99%。枯草芽孢杆菌孢子作为检验干热灭菌效率的生物学指标,在该系统中被高温杀死。所提出的流动空气消毒器测试方法简单、稳定、有效。本研究为流动空气消毒器消毒能力评价测试系统的开发提供了参考。
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引用次数: 0
期刊
Journal of Biosafety and Biosecurity
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