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Multimodal Imaging Unveils the Impact of Nanotopography on Cellular Metabolic Activities
Pub Date : 2024-11-18 DOI: 10.1021/cbmi.4c0005110.1021/cbmi.4c00051
Zhi Li, Einollah Sarikhani, Sirasit Prayotamornkul, Dhivya Pushpa Meganathan, Zeinab Jahed* and Lingyan Shi*, 

Nanoscale surface topography is an effective approach in modulating cell-material interactions, significantly impacting cellular and nuclear morphologies, as well as their functionality. However, the adaptive changes in cellular metabolism induced by the mechanical and geometrical microenvironment of the nanotopography remain poorly understood. In this study, we investigated the metabolic activities in cells cultured on engineered nanopillar substrates by using a label-free multimodal optical imaging platform. This multimodal imaging platform, integrating two photon fluorescence (TPF) and stimulated Raman scattering (SRS) microscopy, allowed us to directly visualize and quantify metabolic activities of cells in 3D at the subcellular scale. We discovered that the nanopillar structure significantly reduced the cell spreading area and circularity compared to flat surfaces. Nanopillar-induced mechanical cues significantly modulate cellular metabolic activities with variations in nanopillar geometry further influencing these metabolic processes. Cells cultured on nanopillars exhibited reduced oxidative stress, decreased protein and lipid synthesis, and lower lipid unsaturation in comparison to those on flat substrates. Hierarchical clustering also revealed that pitch differences in the nanopillar had a more significant impact on cell metabolic activity than diameter variations. These insights improve our understanding of how engineered nanotopographies can be used to control cellular metabolism, offering possibilities for designing advanced cell culture platforms which can modulate cell behaviors and mimic natural cellular environment and optimize cell-based applications. By leveraging the unique metabolic effects of nanopillar arrays, one can develop more effective strategies for directing the fate of cells, enhancing the performance of cell-based therapies, and creating regenerative medicine applications.

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引用次数: 0
The Evolution of Sub-diffraction Chemical Imaging from Nanoscale to AI 亚衍射化学成像技术从纳米级到人工智能的发展历程
Pub Date : 2024-10-29 DOI: 10.1021/cbmi.4c0007910.1021/cbmi.4c00079
Ji-Xin Cheng*, Tai-Yen Chen* and Peng Chen*, 
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引用次数: 0
The Evolution of Sub-diffraction Chemical Imaging from Nanoscale to AI.
Pub Date : 2024-10-29 eCollection Date: 2024-11-25 DOI: 10.1021/cbmi.4c00079
Ji-Xin Cheng, Tai-Yen Chen, Peng Chen
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引用次数: 0
Suppressing ROS Production of AIE Nanoprobes by Simple Matrices Optimization for CNS Cell Observation and Minimized Influence of Cytoskeleton Morphology.
Pub Date : 2024-10-15 eCollection Date: 2024-11-25 DOI: 10.1021/cbmi.4c00061
Xiaotong Chen, Yajing Jiang, Jiaxin Liu, Yu Tian, Yifan Deng, Xiaoqiong Li, Wenbo Wu, Ruoyu Zhang, Yulin Deng

The visualization of the central nervous system (CNS) has proposed stringent criteria for fluorescent probes, as the inevitable production of reactive oxygen species (ROS) or heat generated from most photoluminescent probes upon excitation can disturb the normal status of relatively delicate CNS cells. In this work, a red-emitting fluorogen with aggregation-induced emission (AIE) characteristics, known as DTF, was chosen as the model fluorogen to investigate whether the side effects of ROS and heat could be suppressed through easy-to-operate processes. Specifically, DTF was encapsulated with different amphiphilic matrices to yield AIE nanoprobes, and their photoluminescent properties, ROS production, and photothermal conversion rates were examined. BSA@DTF NPs possessed 1.3-fold brightness compared to that of DSPE-PEG@DTF NPs and F127@DTF NPs but its ROS generation efficiency is markedly decreased to only 2.4% of that produced by F127@DTF NPs. Meanwhile, BSA@DTF NPs showed a negligible photothermal effect. These features make BSA@DTF NPs favorable for long-term live cell imaging, particularly for fluorescent imaging of CNS cells. BSA@DTF NPs were able to sustain the normal state of HT-22 neuronal cells with continuous illumination for at least 25 min, and they also preserved the cytoskeleton of microglia BV-2 cells as the untreated control group. This work represents a successful but easy-to-operate process to suppress the ROS generation of red-emissive AIEgen, and it highlights the importance of minimizing the ROS generation of the fluorescent probes, particularly in the application of long-term imaging of CNS cells.

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引用次数: 0
Suppressing ROS Production of AIE Nanoprobes by Simple Matrices Optimization for CNS Cell Observation and Minimized Influence of Cytoskeleton Morphology 通过优化简单基质抑制 AIE 纳米探针产生 ROS,以观察中枢神经系统细胞并最大限度地减少细胞骨架形态的影响
Pub Date : 2024-10-15 DOI: 10.1021/cbmi.4c0006110.1021/cbmi.4c00061
Xiaotong Chen, Yajing Jiang, Jiaxin Liu, Yu Tian, Yifan Deng, Xiaoqiong Li*, Wenbo Wu*, Ruoyu Zhang* and Yulin Deng*, 

The visualization of the central nervous system (CNS) has proposed stringent criteria for fluorescent probes, as the inevitable production of reactive oxygen species (ROS) or heat generated from most photoluminescent probes upon excitation can disturb the normal status of relatively delicate CNS cells. In this work, a red-emitting fluorogen with aggregation-induced emission (AIE) characteristics, known as DTF, was chosen as the model fluorogen to investigate whether the side effects of ROS and heat could be suppressed through easy-to-operate processes. Specifically, DTF was encapsulated with different amphiphilic matrices to yield AIE nanoprobes, and their photoluminescent properties, ROS production, and photothermal conversion rates were examined. BSA@DTF NPs possessed 1.3-fold brightness compared to that of DSPE-PEG@DTF NPs and F127@DTF NPs but its ROS generation efficiency is markedly decreased to only 2.4% of that produced by F127@DTF NPs. Meanwhile, BSA@DTF NPs showed a negligible photothermal effect. These features make BSA@DTF NPs favorable for long-term live cell imaging, particularly for fluorescent imaging of CNS cells. BSA@DTF NPs were able to sustain the normal state of HT-22 neuronal cells with continuous illumination for at least 25 min, and they also preserved the cytoskeleton of microglia BV-2 cells as the untreated control group. This work represents a successful but easy-to-operate process to suppress the ROS generation of red-emissive AIEgen, and it highlights the importance of minimizing the ROS generation of the fluorescent probes, particularly in the application of long-term imaging of CNS cells.

中枢神经系统(CNS)的可视化对荧光探针提出了严格的标准,因为大多数光致发光探针在激发时不可避免地会产生活性氧(ROS)或热量,从而干扰相对脆弱的中枢神经系统细胞的正常状态。在这项工作中,我们选择了一种具有聚集诱导发射(AIE)特性的红色发光荧光原(即 DTF)作为模型荧光原,以研究是否可以通过易于操作的过程来抑制 ROS 和热量的副作用。具体而言,用不同的两亲基质包覆 DTF 以产生 AIE 纳米探针,并考察了它们的光致发光特性、ROS 生成和光热转换率。与DSPE-PEG@DTF NPs和F127@DTF NPs相比,BSA@DTF NPs具有1.3倍的亮度,但其ROS生成效率明显降低,仅为F127@DTF NPs的2.4%。同时,BSA@DTF NPs 的光热效应可以忽略不计。这些特点使得BSA@DTF NPs有利于长期活细胞成像,特别是中枢神经系统细胞的荧光成像。BSA@DTF NPs 能够在持续光照下维持 HT-22 神经元细胞的正常状态至少 25 分钟,而且与未经处理的对照组一样,它们还能保持小胶质细胞 BV-2 的细胞骨架。这项工作代表了一种成功但易于操作的抑制红色致敏 AIEgen 产生 ROS 的方法,它强调了尽量减少荧光探针产生 ROS 的重要性,尤其是在中枢神经系统细胞的长期成像应用中。
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引用次数: 0
Advances in Super-resolution Stimulated Raman Scattering Microscopy.
Pub Date : 2024-10-04 eCollection Date: 2024-11-25 DOI: 10.1021/cbmi.4c00057
William J Tipping, Karen Faulds, Duncan Graham

Super-resolution optical imaging overcomes the diffraction limit in light microscopy to enable the visualization of previously invisible molecular details within a sample. The realization of super-resolution imaging based on stimulated Raman scattering (SRS) microscopy represents a recent area of fruitful development that has been used to visualize cellular structures in three dimensions, with multiple spectroscopic colors at the nanometer scale. Several fundamental approaches to achieving super-resolution SRS imaging have been reported, including optical engineering strategies, expansion microscopy, deconvolution image analysis, and photoswitchable SRS reporters as methods to break the diffraction limit. These approaches have enabled the visualization of biological structures, cellular interactions, and dynamics with unprecedented detail. In this Perspective, an overview of the current strategies and capabilities for achieving super-resolution SRS imaging will be highlighted together with an outlook on potential directions of this rapidly evolving field.

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引用次数: 0
Advances in Super-resolution Stimulated Raman Scattering Microscopy 超分辨率受激拉曼散射显微镜的研究进展
Pub Date : 2024-10-04 DOI: 10.1021/cbmi.4c0005710.1021/cbmi.4c00057
William J. Tipping*, Karen Faulds and Duncan Graham*, 

Super-resolution optical imaging overcomes the diffraction limit in light microscopy to enable the visualization of previously invisible molecular details within a sample. The realization of super-resolution imaging based on stimulated Raman scattering (SRS) microscopy represents a recent area of fruitful development that has been used to visualize cellular structures in three dimensions, with multiple spectroscopic colors at the nanometer scale. Several fundamental approaches to achieving super-resolution SRS imaging have been reported, including optical engineering strategies, expansion microscopy, deconvolution image analysis, and photoswitchable SRS reporters as methods to break the diffraction limit. These approaches have enabled the visualization of biological structures, cellular interactions, and dynamics with unprecedented detail. In this Perspective, an overview of the current strategies and capabilities for achieving super-resolution SRS imaging will be highlighted together with an outlook on potential directions of this rapidly evolving field.

超分辨率光学成像克服了光学显微镜的衍射极限,使以前看不到的样品内部分子细节变得可视化。基于受激拉曼散射(SRS)显微镜的超分辨率成像技术的实现代表了最近一个富有成果的发展领域,该技术已被用于在纳米尺度上以多种光谱颜色对细胞结构进行三维可视化。实现超分辨 SRS 成像的几种基本方法已有报道,包括光学工程策略、扩展显微镜、解卷积图像分析以及作为打破衍射极限方法的光开关 SRS 报告器。这些方法使生物结构、细胞相互作用和动态的可视化变得前所未有的详细。本视角将概述实现超分辨率 SRS 成像的当前策略和能力,并展望这一快速发展领域的潜在发展方向。
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引用次数: 0
Monitoring Macrophage Polarization with Gene Expression Reporters and Bioluminescence Phasor Analysis.
Pub Date : 2024-10-03 eCollection Date: 2024-11-25 DOI: 10.1021/cbmi.4c00049
Giulia Tedeschi, Mariana X Navarro, Lorenzo Scipioni, Tanvi K Sondhi, Jennifer A Prescher, Michelle A Digman

Macrophages exhibit a spectrum of behaviors upon activation and are generally classified as one of two types: inflammatory (M1) or anti-inflammatory (M2). Tracking these phenotypes in living cells can provide insight into immune function but remains a challenging pursuit. Existing methods are mostly limited to static readouts or are difficult to employ for multiplexed imaging in complex 3D environments while maintaining cellular resolution. We aimed to fill this void using bioluminescent technologies. Here we report genetically engineered luciferase reporters for the long-term monitoring of macrophage polarization via spectral phasor analysis. M1- and M2-specific promoters were used to drive the expression of bioluminescent enzymes in macrophage cell lines. The readouts were multiplexed and discernible in both 2D and 3D formats with single-cell resolution in living samples. Collectively, this work expands the toolbox of methods for monitoring macrophage polarization and provides a blueprint for monitoring other multifaceted networks in heterogeneous environments.

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引用次数: 0
Monitoring Macrophage Polarization with Gene Expression Reporters and Bioluminescence Phasor Analysis 利用基因表达报告和生物发光相位分析监测巨噬细胞极化
Pub Date : 2024-10-03 DOI: 10.1021/cbmi.4c0004910.1021/cbmi.4c00049
Giulia Tedeschi, Mariana X. Navarro, Lorenzo Scipioni, Tanvi K. Sondhi, Jennifer A. Prescher* and Michelle A. Digman*, 

Macrophages exhibit a spectrum of behaviors upon activation and are generally classified as one of two types: inflammatory (M1) or anti-inflammatory (M2). Tracking these phenotypes in living cells can provide insight into immune function but remains a challenging pursuit. Existing methods are mostly limited to static readouts or are difficult to employ for multiplexed imaging in complex 3D environments while maintaining cellular resolution. We aimed to fill this void using bioluminescent technologies. Here we report genetically engineered luciferase reporters for the long-term monitoring of macrophage polarization via spectral phasor analysis. M1- and M2-specific promoters were used to drive the expression of bioluminescent enzymes in macrophage cell lines. The readouts were multiplexed and discernible in both 2D and 3D formats with single-cell resolution in living samples. Collectively, this work expands the toolbox of methods for monitoring macrophage polarization and provides a blueprint for monitoring other multifaceted networks in heterogeneous environments.

巨噬细胞在活化后会表现出一系列行为,一般分为两种类型:炎症(M1)或抗炎(M2)。在活细胞中跟踪这些表型可深入了解免疫功能,但这仍是一项具有挑战性的工作。现有的方法大多局限于静态读数,或者难以在复杂的三维环境中进行多重成像,同时保持细胞分辨率。我们的目标是利用生物发光技术填补这一空白。在此,我们报告了基因工程荧光素酶报告器,用于通过光谱相位分析长期监测巨噬细胞极化。我们使用 M1 和 M2 特异性启动子来驱动巨噬细胞系中生物发光酶的表达。在活体样本中,读出的结果是多路复用的,并可在二维和三维格式中以单细胞分辨率辨别。总之,这项工作扩展了监测巨噬细胞极化的方法工具箱,并为监测异质环境中的其他多层面网络提供了蓝图。
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引用次数: 0
Fluorescent Water-Soluble Polycationic Chitosan Polymers as Markers for Biological 3D Imaging 作为生物三维成像标记的荧光水溶性聚阳离子壳聚糖聚合物
Pub Date : 2024-09-10 DOI: 10.1021/cbmi.4c0002810.1021/cbmi.4c00028
Srishti Vajpayee, Tiziana Picascia, Fabio Casciano, Elisabetta Viale, Luca Ronda, Stefano Bettati, Daniela Milani, Norbert Gretz and Rossana Perciaccante*, 

Over the last decades, various tissue-clearing techniques have broken the ground for the optical imaging of whole organs and whole-organisms, providing complete representative data sets of three-dimensional biological structures. Along with advancements in this field, the development of fluorescent markers for staining vessels and capillaries has offered insights into the complexity of vascular networks and their impact on disease progression. Here we describe the use of a modified water-soluble chitosan linked to cyanine dyes in combination with ethyl cinnamate-based optical tissue clearing for the 3D visualization of tissue vasculature in depth. The water-soluble fluorescent Chitosans have proven to be an optimal candidate for labeling both vessels and capillaries ex vivo thanks to their increased water solubility, high photostability, and optical properties in the near-infrared window. In addition, the nontoxicity of these markers broadens their applicability to in vitro and in vivo biological applications. Despite the availability of other fluorescent molecules for vascular staining, the present study, for the first time, demonstrates the potential of fluorescent chitosans to depict vessels at the capillary level and opens avenues for advancing the diagnostic field by reducing the complexity and costs of the currently available procedures.

在过去几十年中,各种组织清除技术为整个器官和整个生物体的光学成像开辟了道路,提供了三维生物结构的完整代表性数据集。在这一领域取得进步的同时,用于染色血管和毛细血管的荧光标记的发展也让人们深入了解了血管网络的复杂性及其对疾病进展的影响。在此,我们介绍了一种与氰基染料相连的改性水溶性壳聚糖与肉桂酸乙酯光学组织清除技术相结合,用于组织血管的三维深度可视化。事实证明,水溶性荧光壳聚糖具有更高的水溶性、高光稳定性和近红外窗口的光学特性,是标记体内血管和毛细血管的最佳选择。此外,这些标记物的无毒性也拓宽了它们在体外和体内生物应用中的适用性。尽管目前已有其他用于血管染色的荧光分子,但本研究首次证明了荧光壳聚糖在毛细血管层面描绘血管的潜力,并通过降低现有程序的复杂性和成本,为推动诊断领域的发展开辟了道路。
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引用次数: 0
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Chemical & Biomedical Imaging
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