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Fluorescent Water-Soluble Polycationic Chitosan Polymers as Markers for Biological 3D Imaging. 作为生物三维成像标记的荧光水溶性多阳离子壳聚糖聚合物。
Pub Date : 2024-09-10 eCollection Date: 2024-10-28 DOI: 10.1021/cbmi.4c00028
Srishti Vajpayee, Tiziana Picascia, Fabio Casciano, Elisabetta Viale, Luca Ronda, Stefano Bettati, Daniela Milani, Norbert Gretz, Rossana Perciaccante

Over the last decades, various tissue-clearing techniques have broken the ground for the optical imaging of whole organs and whole-organisms, providing complete representative data sets of three-dimensional biological structures. Along with advancements in this field, the development of fluorescent markers for staining vessels and capillaries has offered insights into the complexity of vascular networks and their impact on disease progression. Here we describe the use of a modified water-soluble chitosan linked to cyanine dyes in combination with ethyl cinnamate-based optical tissue clearing for the 3D visualization of tissue vasculature in depth. The water-soluble fluorescent Chitosans have proven to be an optimal candidate for labeling both vessels and capillaries ex vivo thanks to their increased water solubility, high photostability, and optical properties in the near-infrared window. In addition, the nontoxicity of these markers broadens their applicability to in vitro and in vivo biological applications. Despite the availability of other fluorescent molecules for vascular staining, the present study, for the first time, demonstrates the potential of fluorescent chitosans to depict vessels at the capillary level and opens avenues for advancing the diagnostic field by reducing the complexity and costs of the currently available procedures.

在过去几十年中,各种组织清除技术为整个器官和整个生物体的光学成像开辟了道路,提供了三维生物结构的完整代表性数据集。在这一领域取得进步的同时,用于染色血管和毛细血管的荧光标记的发展也让人们深入了解了血管网络的复杂性及其对疾病进展的影响。在这里,我们介绍了一种与青色染料相连的改性水溶性壳聚糖与肉桂酸乙酯光学组织清除技术相结合,用于组织血管的三维深度可视化。事实证明,水溶性荧光壳聚糖具有更高的水溶性、高光稳定性和近红外窗口的光学特性,是标记体内血管和毛细血管的最佳选择。此外,这些标记物的无毒性也拓宽了它们在体外和体内生物应用中的适用性。尽管目前已有其他用于血管染色的荧光分子,但本研究首次证明了荧光壳聚糖在毛细血管层面描绘血管的潜力,并通过降低现有程序的复杂性和成本,为推动诊断领域的发展开辟了道路。
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引用次数: 0
Peptide PET Imaging: A Review of Recent Developments and a Look at the Future of Radiometal-Labeled Peptides in Medicine. 多肽 PET 成像:多肽正电子发射计算机断层成像:最新发展综述及放射性同位素标记多肽在医学中的未来展望》(Peptide PET Imaging: A Review of Recent Developments and a Look at the Future of Radiometal-Labeled Peptides in Medicine.
Pub Date : 2024-08-23 eCollection Date: 2024-09-23 DOI: 10.1021/cbmi.4c00030
Majed Shabsigh, Lee A Solomon

The development of peptide-based, radiometal-labeled PET imaging agents has seen an increase in attention due to the favorable properties the peptide backbone exhibits. These include high selectivity and affinity to proteins and cells directly linked to various types of cancers. In addition, rapid clearance from circulation and low toxicity allow for unique approaches to engineering a viable peptide-based imaging agent. Utilizing peptides as the backbone allows for various modifications to improve metabolic stability, target cell affinity, and image quality and imaging capabilities and reduce toxicity. Select radiolabeled peptides have already been FDA approved, with many more in late-stage trials. This review summarizes the current state of the radiometal-labeled PET peptide imaging field as well as explores methods used by researchers to modify peptides, concluding with a look at the future of peptide-based therapy and diagnostics.

由于多肽骨架所具有的有利特性,基于多肽的放射性金属标记 PET 成像剂的开发越来越受到关注。这些特性包括对与各类癌症直接相关的蛋白质和细胞具有高选择性和亲和性。此外,肽在血液循环中的快速清除和低毒性使我们能够采用独特的方法来设计一种可行的肽基成像剂。利用肽作为骨架可以进行各种修饰,以提高代谢稳定性、靶细胞亲和力、图像质量和成像能力,并降低毒性。部分放射性标记肽已获得 FDA 批准,还有更多肽处于后期试验阶段。本综述总结了放射性同位素标记 PET 肽成像领域的现状,并探讨了研究人员用来修饰肽的方法,最后展望了基于肽的治疗和诊断的未来。
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引用次数: 0
Peptide PET Imaging: A Review of Recent Developments and a Look at the Future of Radiometal-Labeled Peptides in Medicine 多肽 PET 成像:近期发展回顾与放射性同位素标记肽在医学中的未来展望
Pub Date : 2024-08-22 DOI: 10.1021/cbmi.4c0003010.1021/cbmi.4c00030
Majed Shabsigh,  and , Lee A. Solomon*, 

The development of peptide-based, radiometal-labeled PET imaging agents has seen an increase in attention due to the favorable properties the peptide backbone exhibits. These include high selectivity and affinity to proteins and cells directly linked to various types of cancers. In addition, rapid clearance from circulation and low toxicity allow for unique approaches to engineering a viable peptide-based imaging agent. Utilizing peptides as the backbone allows for various modifications to improve metabolic stability, target cell affinity, and image quality and imaging capabilities and reduce toxicity. Select radiolabeled peptides have already been FDA approved, with many more in late-stage trials. This review summarizes the current state of the radiometal-labeled PET peptide imaging field as well as explores methods used by researchers to modify peptides, concluding with a look at the future of peptide-based therapy and diagnostics.

由于多肽骨架所具有的良好特性,以多肽为基础的放射性金属标记 PET 成像剂的开发越来越受到关注。这些特性包括对与各类癌症直接相关的蛋白质和细胞具有高选择性和亲和性。此外,肽在血液循环中的快速清除和低毒性使我们可以采用独特的方法来设计一种可行的肽基成像剂。利用肽作为骨架可以进行各种修饰,以提高代谢稳定性、靶细胞亲和力、成像质量和成像能力,并降低毒性。部分放射性标记肽已获得 FDA 批准,还有更多肽处于后期试验阶段。本综述总结了放射性同位素标记 PET 肽成像领域的现状,并探讨了研究人员用来修饰肽的方法,最后展望了基于肽的治疗和诊断的未来。
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引用次数: 0
DNA-FRET Constructs Enable Multiplexed Fluorescence Detection at the Single-Molecule Level DNA-FRET 构建可实现单分子水平的多重荧光检测
Pub Date : 2024-08-08 DOI: 10.1021/cbmi.4c0005410.1021/cbmi.4c00054
Juan Wang,  and , Hanyang Yu*, 
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引用次数: 0
Milk Exosome-Glow Nanosystem for Cancer Cellular and Tissue Bioimaging. 用于癌症细胞和组织生物成像的牛奶外泌体-光纳米系统。
Pub Date : 2024-08-07 eCollection Date: 2024-10-28 DOI: 10.1021/cbmi.4c00040
Nycol M Cotto, Neeraj Chauhan, Benilde Adriano, Deepak S Chauhan, Marco Cabrera, Subhash C Chauhan, Murali M Yallapu

Milk-derived exosomes are widely used for diagnosis, delivery, imaging, and theranostic applications. Near-Infrared (NIR) based fluorescence bioimaging is an attractive and safer technique that is used for clinical applications. However, almost all NIR imaging agents tend to have poor photostability, short half-life, nonspecific protein binding, and concentration-dependent aggregation(s). Therefore, there is an unmet clinical need to develop newer and safer modalities to package and deliver NIR imaging agents. Bovine milk exosomes are natural, biocompatible, safe, and efficient nanocarriers that facilitate the delivery of micro- and macromolecules. Herein, we developed an exosome-based NIR dye loaded nanoimaging formulation that offers improved solubility and photostability of NIR dye. Following the acetic acid based extracellular vesicle (EV) treatment method, we extracted the bovine milk exosomes from a variety of pasteurized grade milk. The EVs were screened for their physicochemical properties such as particle size and concentration and zeta potential. The stability of these exosomes was also determined under different conditions, including storage temperatures, pH, and salt concentrations. Next, indocyanine green, a model NIR dye was loaded into these exosomes (Exo-Glow) via a sonication method and further assessed for their improved fluorescence intensity and photostability using an IVIS imaging system. Initial screening suggested that size of the selected bovine milk exosomes was ∼100-135 nm with an average particle concentration of 5.8 × 102 particles/mL. Exo-Glow further demonstrated higher fluorescence intensity in cancer cells and tissues when compared to free dye. These results showed that Exo-Glow has the potential to serve as a safer NIR imaging tool for cancer cells/tissues.

源自牛奶的外泌体被广泛用于诊断、递送、成像和治疗应用。基于近红外(NIR)的荧光生物成像是一种有吸引力且更安全的技术,可用于临床应用。然而,几乎所有的近红外成像剂都存在光稳定性差、半衰期短、非特异性蛋白质结合和浓度依赖性聚集等问题。因此,开发更新、更安全的近红外成像剂包装和递送方式的临床需求尚未得到满足。牛乳外泌体是一种天然、生物相容性好、安全且高效的纳米载体,可促进微分子和大分子的递送。在此,我们开发了一种基于外泌体的近红外染料纳米成像制剂,该制剂具有更好的近红外染料溶解性和光稳定性。我们采用基于醋酸的细胞外囊泡(EV)处理方法,从各种巴氏杀菌级牛奶中提取了牛乳外泌体。我们筛选了这些外泌体的理化性质,如粒径、浓度和 zeta 电位。我们还测定了这些外泌体在不同条件下的稳定性,包括储存温度、pH 值和盐浓度。接着,通过超声法将吲哚菁绿这种近红外染料模型载入这些外泌体(Exo-Glow),并使用 IVIS 成像系统进一步评估它们的荧光强度和光稳定性。初步筛选表明,所选牛乳外泌体的大小为 100-135 nm,平均颗粒浓度为 5.8 × 102 颗粒/毫升。与游离染料相比,Exo-Glow 在癌细胞和组织中的荧光强度更高。这些结果表明,Exo-Glow 有潜力成为癌细胞/组织更安全的近红外成像工具。
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引用次数: 0
Milk Exosome-Glow Nanosystem for Cancer Cellular and Tissue Bioimaging 用于癌症细胞和组织生物成像的牛奶外泌体-光纳米系统
Pub Date : 2024-08-07 DOI: 10.1021/cbmi.4c0004010.1021/cbmi.4c00040
Nycol M. Cotto, Neeraj Chauhan, Benilde Adriano, Deepak S. Chauhan, Marco Cabrera, Subhash C. Chauhan and Murali M. Yallapu*, 

Milk-derived exosomes are widely used for diagnosis, delivery, imaging, and theranostic applications. Near-Infrared (NIR) based fluorescence bioimaging is an attractive and safer technique that is used for clinical applications. However, almost all NIR imaging agents tend to have poor photostability, short half-life, nonspecific protein binding, and concentration-dependent aggregation(s). Therefore, there is an unmet clinical need to develop newer and safer modalities to package and deliver NIR imaging agents. Bovine milk exosomes are natural, biocompatible, safe, and efficient nanocarriers that facilitate the delivery of micro- and macromolecules. Herein, we developed an exosome-based NIR dye loaded nanoimaging formulation that offers improved solubility and photostability of NIR dye. Following the acetic acid based extracellular vesicle (EV) treatment method, we extracted the bovine milk exosomes from a variety of pasteurized grade milk. The EVs were screened for their physicochemical properties such as particle size and concentration and zeta potential. The stability of these exosomes was also determined under different conditions, including storage temperatures, pH, and salt concentrations. Next, indocyanine green, a model NIR dye was loaded into these exosomes (Exo-Glow) via a sonication method and further assessed for their improved fluorescence intensity and photostability using an IVIS imaging system. Initial screening suggested that size of the selected bovine milk exosomes was ∼100–135 nm with an average particle concentration of 5.8 × 102 particles/mL. Exo-Glow further demonstrated higher fluorescence intensity in cancer cells and tissues when compared to free dye. These results showed that Exo-Glow has the potential to serve as a safer NIR imaging tool for cancer cells/tissues.

源自牛奶的外泌体被广泛用于诊断、递送、成像和治疗应用。基于近红外(NIR)的荧光生物成像是一种有吸引力且更安全的技术,可用于临床应用。然而,几乎所有的近红外成像剂都存在光稳定性差、半衰期短、非特异性蛋白质结合和浓度依赖性聚集等问题。因此,开发更新、更安全的近红外成像剂包装和递送方式的临床需求尚未得到满足。牛乳外泌体是一种天然、生物相容性好、安全且高效的纳米载体,可促进微分子和大分子的递送。在此,我们开发了一种基于外泌体的近红外染料纳米成像制剂,该制剂具有更好的近红外染料溶解性和光稳定性。我们采用基于醋酸的细胞外囊泡(EV)处理方法,从各种巴氏杀菌级牛奶中提取了牛乳外泌体。我们筛选了这些外泌体的理化性质,如粒径、浓度和 zeta 电位。我们还测定了这些外泌体在不同条件下的稳定性,包括储存温度、pH 值和盐浓度。接着,通过超声法将吲哚菁绿这种近红外染料模型载入这些外泌体(Exo-Glow),并使用 IVIS 成像系统进一步评估它们的荧光强度和光稳定性。初步筛选表明,所选牛乳外泌体的大小为 100-135 nm,平均颗粒浓度为 5.8 × 102 颗粒/毫升。与游离染料相比,Exo-Glow 在癌细胞和组织中的荧光强度更高。这些结果表明,Exo-Glow 有潜力成为癌细胞/组织更安全的近红外成像工具。
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引用次数: 0
Cervical Cancer Tissue Analysis Using Photothermal Midinfrared Spectroscopic Imaging. 利用光热中红外光谱成像分析宫颈癌组织
Pub Date : 2024-07-31 eCollection Date: 2024-09-23 DOI: 10.1021/cbmi.4c00031
Reza Reihanisaransari, Chalapathi Charan Gajjela, Xinyu Wu, Ragib Ishrak, Yanping Zhong, David Mayerich, Sebastian Berisha, Rohith Reddy

Hyperspectral photothermal mid-infrared spectroscopic imaging (HP-MIRSI) is an emerging technology with promising applications in cervical cancer diagnosis and quantitative, label-free histopathology. This study pioneers the application of HP-MIRSI to the evaluation of clinical cervical cancer tissues, achieving excellent tissue type segmentation accuracy of over 95%. This achievement stems from an integrated approach of optimized data acquisition, computational data reconstruction, and the application of machine learning algorithms. The results are statistically robust, drawing from tissue samples of 98 cervical cancer patients and incorporating over 40 million data points. Traditional cervical cancer diagnosis methods entail biopsy, staining, and visual evaluation by a pathologist. This process is qualitative, subject to variations in staining and subjective interpretations, and requires extensive tissue processing, making it costly and time-consuming. In contrast, our proposed alternative can produce images comparable to those from histological analyses without the need for staining or complex sample preparation. This label-free, quantitative method utilizes biochemical data from HP-MIRSI and employs machine-learning algorithms for the rapid and precise segmentation of cervical tissue subtypes. This approach can potentially transform histopathological analysis by offering a more accurate and label-free alternative to conventional diagnostic processes.

高光谱光热中红外光谱成像(HP-MIRSI)是一项新兴技术,在宫颈癌诊断和定量无标记组织病理学方面具有广阔的应用前景。本研究开创性地将 HP-MIRSI 应用于临床宫颈癌组织评估,实现了超过 95% 的出色组织类型分割准确率。这一成就源于优化数据采集、计算数据重建和应用机器学习算法的综合方法。这些结果在统计上是稳健的,它们来自 98 名宫颈癌患者的组织样本,包含 4000 多万个数据点。传统的宫颈癌诊断方法需要病理学家进行活检、染色和目测评估。这一过程是定性的,受染色变化和主观解释的影响,并且需要大量的组织处理,因此成本高、耗时长。相比之下,我们提出的替代方法可以生成与组织学分析相当的图像,而无需染色或复杂的样本制备。这种无标记的定量方法利用 HP-MIRSI 的生化数据,并采用机器学习算法来快速、精确地分割宫颈组织亚型。这种方法为传统诊断过程提供了一种更准确、无标记的替代方法,从而有可能改变组织病理学分析。
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引用次数: 0
Cervical Cancer Tissue Analysis Using Photothermal Midinfrared Spectroscopic Imaging 利用光热中红外光谱成像分析宫颈癌组织
Pub Date : 2024-07-31 DOI: 10.1021/cbmi.4c0003110.1021/cbmi.4c00031
Reza Reihanisaransari, Chalapathi Charan Gajjela, Xinyu Wu, Ragib Ishrak, Yanping Zhong, David Mayerich, Sebastian Berisha and Rohith Reddy*, 

Hyperspectral photothermal mid-infrared spectroscopic imaging (HP-MIRSI) is an emerging technology with promising applications in cervical cancer diagnosis and quantitative, label-free histopathology. This study pioneers the application of HP-MIRSI to the evaluation of clinical cervical cancer tissues, achieving excellent tissue type segmentation accuracy of over 95%. This achievement stems from an integrated approach of optimized data acquisition, computational data reconstruction, and the application of machine learning algorithms. The results are statistically robust, drawing from tissue samples of 98 cervical cancer patients and incorporating over 40 million data points. Traditional cervical cancer diagnosis methods entail biopsy, staining, and visual evaluation by a pathologist. This process is qualitative, subject to variations in staining and subjective interpretations, and requires extensive tissue processing, making it costly and time-consuming. In contrast, our proposed alternative can produce images comparable to those from histological analyses without the need for staining or complex sample preparation. This label-free, quantitative method utilizes biochemical data from HP-MIRSI and employs machine-learning algorithms for the rapid and precise segmentation of cervical tissue subtypes. This approach can potentially transform histopathological analysis by offering a more accurate and label-free alternative to conventional diagnostic processes.

高光谱光热中红外光谱成像(HP-MIRSI)是一项新兴技术,在宫颈癌诊断和定量无标记组织病理学方面具有广阔的应用前景。本研究开创性地将 HP-MIRSI 应用于临床宫颈癌组织评估,实现了超过 95% 的出色组织类型分割准确率。这一成就源于优化数据采集、计算数据重建和应用机器学习算法的综合方法。这些结果在统计上是稳健的,它们来自 98 名宫颈癌患者的组织样本,包含 4000 多万个数据点。传统的宫颈癌诊断方法需要病理学家进行活检、染色和目测评估。这一过程是定性的,受染色变化和主观解释的影响,并且需要大量的组织处理,因此成本高、耗时长。相比之下,我们提出的替代方法可以生成与组织学分析相当的图像,而无需染色或复杂的样本制备。这种无标记的定量方法利用 HP-MIRSI 的生化数据,并采用机器学习算法来快速、精确地分割宫颈组织亚型。这种方法为传统诊断过程提供了一种更准确、无标记的替代方法,从而有可能改变组织病理学分析。
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引用次数: 0
Cross-Correlation Increases Sampling in Diffusion-Based Super-Resolution Optical Fluctuation Imaging. 交叉相关提高基于扩散的超分辨率光学波动成像的采样率
Pub Date : 2024-07-30 eCollection Date: 2024-09-23 DOI: 10.1021/cbmi.4c00032
Jeanpun Antarasen, Benjamin Wellnitz, Stephanie N Kramer, Surajit Chatterjee, Lydia Kisley

Correlation signal processing of optical three-dimensional (x, y, t) data can produce super-resolution images. The second-order cross-correlation function XC 2 has been documented to produce super-resolution imaging with static and blinking emitters but not for diffusing emitters. Here, we both analytically and numerically demonstrate cross-correlation analysis for diffusing particles. We then expand our fluorescence correlation spectroscopy super-resolution optical fluctuation imaging (fcsSOFI) analysis to use cross-correlation as a postprocessing computational technique to extract both dynamic and structural information on particle diffusion in nanoscale structures simultaneously. Cross-correlation maintains the same super-resolution as auto-correlation while also increasing the sampling rates to reduce aliasing for spatial information in both simulated and experimental data. Our work demonstrates how fcsSOFI with cross-correlation can be a powerful signal-processing tool to resolve the nanoscale dynamics and structure in samples relevant to biological and soft materials.

光学三维(x、y、t)数据的相关信号处理可产生超分辨率图像。根据文献记载,二阶交叉相关函数 XC 2 可对静态和闪烁发射体产生超分辨率成像,但对扩散发射体却无法产生超分辨率成像。在这里,我们用分析和数值方法证明了扩散粒子的交叉相关分析。然后,我们扩展了荧光相关光谱超分辨率光学波动成像(fcsSOFI)分析,将交叉相关作为一种后处理计算技术,同时提取纳米级结构中粒子扩散的动态和结构信息。交叉相关保持了与自相关相同的超分辨率,同时还提高了采样率,以减少模拟和实验数据中空间信息的混叠。我们的工作展示了带有交叉相关的 fcsSOFI 如何成为一种强大的信号处理工具,用于解析与生物和软材料相关的样品中的纳米级动态和结构。
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引用次数: 0
Cross-Correlation Increases Sampling in Diffusion-Based Super-Resolution Optical Fluctuation Imaging 交叉相关提高了基于扩散的超分辨率光学波动成像的采样率
Pub Date : 2024-07-30 DOI: 10.1021/cbmi.4c0003210.1021/cbmi.4c00032
Jeanpun Antarasen, Benjamin Wellnitz, Stephanie N. Kramer, Surajit Chatterjee and Lydia Kisley*, 

Correlation signal processing of optical three-dimensional (x, y, t) data can produce super-resolution images. The second-order cross-correlation function XC2 has been documented to produce super-resolution imaging with static and blinking emitters but not for diffusing emitters. Here, we both analytically and numerically demonstrate cross-correlation analysis for diffusing particles. We then expand our fluorescence correlation spectroscopy super-resolution optical fluctuation imaging (fcsSOFI) analysis to use cross-correlation as a postprocessing computational technique to extract both dynamic and structural information on particle diffusion in nanoscale structures simultaneously. Cross-correlation maintains the same super-resolution as auto-correlation while also increasing the sampling rates to reduce aliasing for spatial information in both simulated and experimental data. Our work demonstrates how fcsSOFI with cross-correlation can be a powerful signal-processing tool to resolve the nanoscale dynamics and structure in samples relevant to biological and soft materials.

光学三维(x、y、t)数据的相关信号处理可产生超分辨率图像。根据文献记载,二阶交叉相关函数 XC2 可以对静态和闪烁的发射体产生超分辨率成像,但对于扩散发射体却不能。在这里,我们用分析和数值方法证明了扩散粒子的交叉相关分析。然后,我们扩展了荧光相关光谱超分辨率光学波动成像(fcsSOFI)分析,将交叉相关作为一种后处理计算技术,同时提取纳米级结构中粒子扩散的动态和结构信息。交叉相关保持了与自相关相同的超分辨率,同时还提高了采样率,以减少模拟和实验数据中空间信息的混叠。我们的工作展示了带有交叉相关的 fcsSOFI 如何成为一种强大的信号处理工具,用于解析与生物和软材料相关的样品中的纳米级动态和结构。
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引用次数: 0
期刊
Chemical & Biomedical Imaging
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