Pub Date : 2026-01-06DOI: 10.1080/26896583.2025.2611653
James O Ibibama, Godswill J Udom, Rehoboth Uwaga, Unique Chukwu, Margaret Azaatse, Chinwe Leonard-Alika, Omunakwe Onu, Samuel Saka, Chiara Frazzoli, Orish Ebere Orisakwe
Therapeutic drug failure poses a significant global health burden, particularly in developing regions with high environmental toxicant exposure. While traditionally attributed to factors such as substandard drugs, genetic polymorphisms, and non-compliance, emerging evidence implicates heavy metals as under-recognized modulators of drug efficacy. This systematic review assessed how heavy metals potentially interfere with the pharmacokinetics and pharmacodynamics of drugs. Following PRISMA guidelines, peer-reviewed articles published between 1999 and 2024 were retrieved from PubMed, ScienceDirect, Web of Science, Scopus and Google Scholar. Studies investigating in vivo, in vitro or clinical evidence of heavy metal interference with therapeutic drug action were eligible. Out of 139 studies identified, 20 studies met the inclusion criteria. Cadmium, lead and mercury were the most implicated metals. Approximately 60% of studies demonstrated that oxidative stress could induce loss of therapeutic drug efficacy, while 40% showed enzyme inhibition (notably CYP3A4 and CYP2C9) or transporter impairment. Experimental models linked these effects to anti-hypertensives, antidiabetics, and drugs used in the management of metabolic disorders. Environmental heavy metal exposures may hinder therapeutic responses through oxidative and metabolic disruption. Integrating environmental exposure assessment into global pharmacovigilance and clinical pharmacology could enhance drug response predictability and treatment success.
治疗性药物失效造成了重大的全球健康负担,特别是在环境毒物暴露程度高的发展中区域。虽然传统上归因于诸如不合格药物、遗传多态性和不依从性等因素,但新出现的证据表明,重金属是药物疗效的未被充分认识的调节剂。本系统综述评估了重金属如何潜在地干扰药物的药代动力学和药效学。按照PRISMA的指导方针,1999年至2024年间发表的同行评议文章从PubMed、ScienceDirect、Web of Science、Scopus和谷歌Scholar中检索。研究重金属干扰治疗药物作用的体内、体外或临床证据均符合条件。在139项研究中,有20项研究符合纳入标准。镉、铅和汞是最受影响的金属。大约60%的研究表明氧化应激可导致治疗药物疗效的丧失,而40%的研究显示酶抑制(特别是CYP3A4和CYP2C9)或转运蛋白损伤。实验模型将这些作用与抗高血压、抗糖尿病和用于代谢紊乱管理的药物联系起来。环境重金属暴露可能通过氧化和代谢破坏阻碍治疗反应。将环境暴露评估纳入全球药物警戒和临床药理学可以提高药物反应的可预测性和治疗成功率。
{"title":"Environmental determinants of therapeutic drug failure: a systematic review of heavy metal-induced inefficacy.","authors":"James O Ibibama, Godswill J Udom, Rehoboth Uwaga, Unique Chukwu, Margaret Azaatse, Chinwe Leonard-Alika, Omunakwe Onu, Samuel Saka, Chiara Frazzoli, Orish Ebere Orisakwe","doi":"10.1080/26896583.2025.2611653","DOIUrl":"https://doi.org/10.1080/26896583.2025.2611653","url":null,"abstract":"<p><p>Therapeutic drug failure poses a significant global health burden, particularly in developing regions with high environmental toxicant exposure. While traditionally attributed to factors such as substandard drugs, genetic polymorphisms, and non-compliance, emerging evidence implicates heavy metals as under-recognized modulators of drug efficacy. This systematic review assessed how heavy metals potentially interfere with the pharmacokinetics and pharmacodynamics of drugs. Following PRISMA guidelines, peer-reviewed articles published between 1999 and 2024 were retrieved from PubMed, ScienceDirect, Web of Science, Scopus and Google Scholar. Studies investigating <i>in vivo, in vitro</i> or clinical evidence of heavy metal interference with therapeutic drug action were eligible. Out of 139 studies identified, 20 studies met the inclusion criteria. Cadmium, lead and mercury were the most implicated metals. Approximately 60% of studies demonstrated that oxidative stress could induce loss of therapeutic drug efficacy, while 40% showed enzyme inhibition (notably CYP3A4 and CYP2C9) or transporter impairment. Experimental models linked these effects to anti-hypertensives, antidiabetics, and drugs used in the management of metabolic disorders. Environmental heavy metal exposures may hinder therapeutic responses through oxidative and metabolic disruption. Integrating environmental exposure assessment into global pharmacovigilance and clinical pharmacology could enhance drug response predictability and treatment success.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"1-23"},"PeriodicalIF":2.3,"publicationDate":"2026-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145913790","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nanoplastics (1-1000 nm) (NPs) represent a novel and insidious class of emerging contaminants with the potential to profoundly disrupt gut microbial ecology and accelerate the spread of antibiotic resistance two critical and converging threats to global health. While prior studies have examined the toxicokinetics of NPs and their general microbial interactions, this review provides the first comprehensive synthesis specifically focused on the nexus between NPs, gut dysbiosis, and the propagation of antibiotic resistance genes (ARGs). This review highlights how NPs alter gut microbiota composition, suppressing beneficial microbes while fostering opportunistic pathogens and how such imbalances may contribute to human health issues. Importantly, emerging evidence also suggests that NPs may serve as unrecognized vectors for horizontal gene transfer (HGT), enabling the rapid dissemination of ARGs via conjugation, transformation, transduction, and extracellular vesicles within the gastrointestinal tract. In addition, this review also identifies urgent methodological gaps in detecting NPs in biological matrices and the environment, as well as assessing their mechanistic impacts, calling for innovation in analytical approaches. By presenting an interdisciplinary perspective that bridges nanotoxicology, microbiome science, and antimicrobial resistance, this article sheds light on an underexplored yet urgent frontier in environmental health, offering novel insights to guide future research, risk assessment, and policy development.
{"title":"Uncovering the nexus of human health hazards of nanoplastics, gut-dysbiosis and antibiotic-resistance.","authors":"Prashant Sharma, Sakshi Dagariya, Shubham Sharma, Manish Singh","doi":"10.1080/26896583.2025.2578871","DOIUrl":"https://doi.org/10.1080/26896583.2025.2578871","url":null,"abstract":"<p><p>Nanoplastics (1-1000 nm) (NPs) represent a novel and insidious class of emerging contaminants with the potential to profoundly disrupt gut microbial ecology and accelerate the spread of antibiotic resistance two critical and converging threats to global health. While prior studies have examined the toxicokinetics of NPs and their general microbial interactions, this review provides the first comprehensive synthesis specifically focused on the nexus between NPs, gut dysbiosis, and the propagation of antibiotic resistance genes (ARGs). This review highlights how NPs alter gut microbiota composition, suppressing beneficial microbes while fostering opportunistic pathogens and how such imbalances may contribute to human health issues. Importantly, emerging evidence also suggests that NPs may serve as unrecognized vectors for horizontal gene transfer (HGT), enabling the rapid dissemination of ARGs <i>via</i> conjugation, transformation, transduction, and extracellular vesicles within the gastrointestinal tract. In addition, this review also identifies urgent methodological gaps in detecting NPs in biological matrices and the environment, as well as assessing their mechanistic impacts, calling for innovation in analytical approaches. By presenting an interdisciplinary perspective that bridges nanotoxicology, microbiome science, and antimicrobial resistance, this article sheds light on an underexplored yet urgent frontier in environmental health, offering novel insights to guide future research, risk assessment, and policy development.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"1-60"},"PeriodicalIF":2.3,"publicationDate":"2025-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145566330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-06-21DOI: 10.1080/26896583.2024.2366737
Si Chen, Zhen Ren, Lei Guo
Since usnic acid was first isolated in 1844 as a prominent secondary lichen metabolite, it has been used for various purposes worldwide. Usnic acid has been claimed to possess numerous therapeutic properties, including antimicrobial, anti-inflammatory, antiviral, anti-proliferative, and antipyretic activities. Approximately two decades ago, crude extracts of usnic acid or pure usnic acid were marketed in the United States as dietary supplements for aiding in weight loss as a "fat-burner" and gained popularity in the bodybuilding community; however, hepatotoxicity was documented for some usnic acid containing products. The US Food and Drug Administration (FDA) received numerous reports of liver toxicity associated with the use of dietary supplements containing usnic acid, leading the FDA to issue a warning letter in 2001 on a product, LipoKinetix. The FDA also sent a recommendation letter to the manufacturer of LipoKinetix, resulting in the withdrawal of LipoKinetix from the market. These events triggered investigations into the hepatotoxicity of usnic acid and its mechanisms. In 2008, we published a review article titled "Usnic Acid and Usnea Barbata Toxicity". This review is an updated version of our previous review article and incorporates additional data published since 2008. The purpose of this review is to provide a comprehensive summary of the understanding of the liver toxicity associated with usnic acid, with a particular focus on the current understanding of the putative mechanisms of usnic acid-related hepatotoxicity.
{"title":"Hepatotoxicity of usnic acid and underlying mechanisms.","authors":"Si Chen, Zhen Ren, Lei Guo","doi":"10.1080/26896583.2024.2366737","DOIUrl":"10.1080/26896583.2024.2366737","url":null,"abstract":"<p><p>Since usnic acid was first isolated in 1844 as a prominent secondary lichen metabolite, it has been used for various purposes worldwide. Usnic acid has been claimed to possess numerous therapeutic properties, including antimicrobial, anti-inflammatory, antiviral, anti-proliferative, and antipyretic activities. Approximately two decades ago, crude extracts of usnic acid or pure usnic acid were marketed in the United States as dietary supplements for aiding in weight loss as a \"fat-burner\" and gained popularity in the bodybuilding community; however, hepatotoxicity was documented for some usnic acid containing products. The US Food and Drug Administration (FDA) received numerous reports of liver toxicity associated with the use of dietary supplements containing usnic acid, leading the FDA to issue a warning letter in 2001 on a product, LipoKinetix. The FDA also sent a recommendation letter to the manufacturer of LipoKinetix, resulting in the withdrawal of LipoKinetix from the market. These events triggered investigations into the hepatotoxicity of usnic acid and its mechanisms. In 2008, we published a review article titled \"Usnic Acid and Usnea Barbata Toxicity\". This review is an updated version of our previous review article and incorporates additional data published since 2008. The purpose of this review is to provide a comprehensive summary of the understanding of the liver toxicity associated with usnic acid, with a particular focus on the current understanding of the putative mechanisms of usnic acid-related hepatotoxicity.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"1-22"},"PeriodicalIF":2.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12366448/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141433348","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2025-07-17DOI: 10.1080/26896583.2025.2530275
Radosław Makowski, Wioletta Rogula-Kozłowska, Andrzej Polanczyk
This review aims to critically assess the carcinogenic and mutagenic risks associated with firefighting, with a focus on cancer incidence, cancer mortality and other chronic health outcomes. Firefighting is widely recognized as a high-risk occupation due to repeated exposure to hazardous substances, including polycyclic aromatic hydrocarbons (PAHs) and other combustion by-products. An extensive review of empirical studies, meta-analyses, and institutional reports was conducted, considering not only direct fireground exposure but also risks arising from contaminated personal protective equipment (PPE) and indoor air pollution within fire stations. The findings establish a consistent link between firefighting and elevated risks of multiple cancers and chronic diseases. The complexity of modern -firefighting -environments, amplified by evolving materials, under--ventilated fires, and inadequate decontamination practices, further intensifies these risks. The review highlights the urgent need for advanced protective gear, standardized decontamination protocols, routine health surveillance, and policy reforms. It underscores the importance of multidisciplinary collaboration in developing effective strategies to safeguard the health of firefighters, who play a vital role in ensuring public safety.
{"title":"Assessing carcinogenic and mutagenic hazards in firefighting: a comprehensive review.","authors":"Radosław Makowski, Wioletta Rogula-Kozłowska, Andrzej Polanczyk","doi":"10.1080/26896583.2025.2530275","DOIUrl":"10.1080/26896583.2025.2530275","url":null,"abstract":"<p><p>This review aims to critically assess the carcinogenic and mutagenic risks associated with firefighting, with a focus on cancer incidence, cancer mortality and other chronic health outcomes. Firefighting is widely recognized as a high-risk occupation due to repeated exposure to hazardous substances, including polycyclic aromatic hydrocarbons (PAHs) and other combustion by-products. An extensive review of empirical studies, meta-analyses, and institutional reports was conducted, considering not only direct fireground exposure but also risks arising from contaminated personal protective equipment (PPE) and indoor air pollution within fire stations. The findings establish a consistent link between firefighting and elevated risks of multiple cancers and chronic diseases. The complexity of modern -firefighting -environments, amplified by evolving materials, under--ventilated fires, and inadequate decontamination practices, further intensifies these risks. The review highlights the urgent need for advanced protective gear, standardized decontamination protocols, routine health surveillance, and policy reforms. It underscores the importance of multidisciplinary collaboration in developing effective strategies to safeguard the health of firefighters, who play a vital role in ensuring public safety.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"411-440"},"PeriodicalIF":2.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144661065","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2025-01-17DOI: 10.1080/26896583.2024.2445957
Dipali Wankhade, Chitra Dhawale, Mrunal Meshram
As the 16th most common cancer globally, oral cancer yearly accounts for some 355,000 new cases. This study underlines that an early diagnosis can improve the prognosis and cut down on mortality. It discloses a multifaceted approach to the detection of oral cancer, including clinical examination, biopsies, imaging techniques, and the incorporation of artificial intelligence and deep learning methods. This study is distinctive in that it provides a thorough analysis of the most recent AI-based methods for detecting oral cancer, including deep learning models and machine learning algorithms that use convolutional neural networks. By improving the precision and effectiveness of cancer cell detection, these models eventually make early diagnosis and therapy possible. This study also discusses the importance of techniques in image pre-processing and segmentation in improving image quality and feature extraction, an essential component of accurate diagnosis. These techniques have shown promising results, with classification accuracies reaching up to 97.66% in some models. Integrating the conventional methods with the cutting-edge AI technologies, this study seeks to advance early diagnosis of oral cancer, thus enhancing patient outcomes and cutting down on the burden this disease is imposing on healthcare systems.
{"title":"Advanced deep learning algorithms in oral cancer detection: Techniques and applications.","authors":"Dipali Wankhade, Chitra Dhawale, Mrunal Meshram","doi":"10.1080/26896583.2024.2445957","DOIUrl":"10.1080/26896583.2024.2445957","url":null,"abstract":"<p><p>As the 16<sup>th</sup> most common cancer globally, oral cancer yearly accounts for some 355,000 new cases. This study underlines that an early diagnosis can improve the prognosis and cut down on mortality. It discloses a multifaceted approach to the detection of oral cancer, including clinical examination, biopsies, imaging techniques, and the incorporation of artificial intelligence and deep learning methods. This study is distinctive in that it provides a thorough analysis of the most recent AI-based methods for detecting oral cancer, including deep learning models and machine learning algorithms that use convolutional neural networks. By improving the precision and effectiveness of cancer cell detection, these models eventually make early diagnosis and therapy possible. This study also discusses the importance of techniques in image pre-processing and segmentation in improving image quality and feature extraction, an essential component of accurate diagnosis. These techniques have shown promising results, with classification accuracies reaching up to 97.66% in some models. Integrating the conventional methods with the cutting-edge AI technologies, this study seeks to advance early diagnosis of oral cancer, thus enhancing patient outcomes and cutting down on the burden this disease is imposing on healthcare systems.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"133-158"},"PeriodicalIF":1.2,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143016123","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-12-22DOI: 10.1080/26896583.2024.2436804
Johnbosco C Egbueri, Johnson C Agbasi, Mohamed ElKashouty, Mohd Yawar Ali Khan, Sani I Abba, Nazia Khan
Nitrate contamination in drinking water poses significant health risks, particularly in rapidly urbanizing areas of developing countries. This study presents an integrated computational and graphical approach to evaluate the geochemistry and health risks of nitrate-contaminated water for six age groups in Southeast, Nigeria. The research employed a detailed methodology combining water nutrient pollution index (WNPI), nitrate pollution index (NPI), water pollution index (WPI), geochemical plotting techniques, stoichiometry, and health risk computations. Water samples from several locations were analyzed for physicochemical parameters and nitrate concentrations. Results revealed predominantly acidic conditions and varying levels of nitrate contamination. Geochemical analysis indicated that silicate weathering and ion exchange processes were the primary influences on water chemistry. The WPI identified 14.29% of samples as "extremely polluted" (WPI > 1), while the WNPI classified 7.14% of samples as "moderately polluted" (WNPI > 1). However, the NPI categorized the samples as safe, indicating low nitrate inputs from anthropogenic sources. Health risk assessments indicated low-moderate risks, with the highest total hazard index of 0.839 for the 6-12 months age group; thus, higher vulnerability for infants. Oral exposure was found to be the dominant pathway, contributing over 99.90% to the total risk. This research provides crucial insights for achieving the Sustainable Development Goals (SDGs) related to water quality and public health protection. The integrated approach offers a robust framework for water resource management and interventions in risk-prone areas. Future research should focus on expanding the spatial coverage, incorporating sensitivity analyses, and exploring advanced technologies for real-time monitoring and predictive modeling of water quality.
{"title":"An integrated computational and graphical approach for evaluating the geochemistry and health risks of nitrate-contaminated water for six age groups.","authors":"Johnbosco C Egbueri, Johnson C Agbasi, Mohamed ElKashouty, Mohd Yawar Ali Khan, Sani I Abba, Nazia Khan","doi":"10.1080/26896583.2024.2436804","DOIUrl":"10.1080/26896583.2024.2436804","url":null,"abstract":"<p><p>Nitrate contamination in drinking water poses significant health risks, particularly in rapidly urbanizing areas of developing countries. This study presents an integrated computational and graphical approach to evaluate the geochemistry and health risks of nitrate-contaminated water for six age groups in Southeast, Nigeria. The research employed a detailed methodology combining water nutrient pollution index (WNPI), nitrate pollution index (NPI), water pollution index (WPI), geochemical plotting techniques, stoichiometry, and health risk computations. Water samples from several locations were analyzed for physicochemical parameters and nitrate concentrations. Results revealed predominantly acidic conditions and varying levels of nitrate contamination. Geochemical analysis indicated that silicate weathering and ion exchange processes were the primary influences on water chemistry. The WPI identified 14.29% of samples as \"extremely polluted\" (WPI > 1), while the WNPI classified 7.14% of samples as \"moderately polluted\" (WNPI > 1). However, the NPI categorized the samples as safe, indicating low nitrate inputs from anthropogenic sources. Health risk assessments indicated low-moderate risks, with the highest total hazard index of 0.839 for the 6-12 months age group; thus, higher vulnerability for infants. Oral exposure was found to be the dominant pathway, contributing over 99.90% to the total risk. This research provides crucial insights for achieving the Sustainable Development Goals (SDGs) related to water quality and public health protection. The integrated approach offers a robust framework for water resource management and interventions in risk-prone areas. Future research should focus on expanding the spatial coverage, incorporating sensitivity analyses, and exploring advanced technologies for real-time monitoring and predictive modeling of water quality.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"82-115"},"PeriodicalIF":1.2,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142878661","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-09-03DOI: 10.1080/26896583.2024.2396731
Wenjing Guo, Jie Liu, Fan Dong, Huixiao Hong
The escalating apprehension surrounding the carcinogenic potential of chemicals emphasizes the imperative need for efficient methods of assessing carcinogenicity. Conventional experimental approaches such as in vitro and in vivo assays, albeit effective, suffer from being costly and time-consuming. In response to this challenge, new alternative methodologies, notably machine learning and deep learning techniques, have attracted attention for their potential in developing carcinogenicity prediction models. This article reviews the progress in predicting carcinogenicity using various machine learning and deep learning algorithms. A comparative analysis on these developed models reveals that support vector machine, random forest, and ensemble learning are commonly preferred for their robustness and effectiveness in predicting chemical carcinogenicity. Conversely, models based on deep learning algorithms, such as feedforward neural network, convolutional neural network, graph convolutional neural network, capsule neural network, and hybrid neural networks, exhibit promising capabilities but are limited by the size of available carcinogenicity datasets. This review provides a comprehensive analysis of current machine learning and deep learning models for carcinogenicity prediction, underscoring the importance of high-quality and large datasets. These observations are anticipated to catalyze future advancements in developing effective and generalizable machine learning and deep learning models for predicting chemical carcinogenicity.
{"title":"Unlocking the potential of AI: Machine learning and deep learning models for predicting carcinogenicity of chemicals.","authors":"Wenjing Guo, Jie Liu, Fan Dong, Huixiao Hong","doi":"10.1080/26896583.2024.2396731","DOIUrl":"10.1080/26896583.2024.2396731","url":null,"abstract":"<p><p>The escalating apprehension surrounding the carcinogenic potential of chemicals emphasizes the imperative need for efficient methods of assessing carcinogenicity. Conventional experimental approaches such as in vitro and in vivo assays, albeit effective, suffer from being costly and time-consuming. In response to this challenge, new alternative methodologies, notably machine learning and deep learning techniques, have attracted attention for their potential in developing carcinogenicity prediction models. This article reviews the progress in predicting carcinogenicity using various machine learning and deep learning algorithms. A comparative analysis on these developed models reveals that support vector machine, random forest, and ensemble learning are commonly preferred for their robustness and effectiveness in predicting chemical carcinogenicity. Conversely, models based on deep learning algorithms, such as feedforward neural network, convolutional neural network, graph convolutional neural network, capsule neural network, and hybrid neural networks, exhibit promising capabilities but are limited by the size of available carcinogenicity datasets. This review provides a comprehensive analysis of current machine learning and deep learning models for carcinogenicity prediction, underscoring the importance of high-quality and large datasets. These observations are anticipated to catalyze future advancements in developing effective and generalizable machine learning and deep learning models for predicting chemical carcinogenicity.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"23-50"},"PeriodicalIF":2.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12442503/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142127290","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Early exposure to bisphenol A (BPA) is associated with increased asthma prevalence. To examine the effects of the most widely used BPA substitute, bisphenol S (BPS), on the development of childhood asthma, we conducted the study using the mouse model of early exposure. To simulate the burden from the human chronic exposure, we used a short-term exposure with 10 µg/ml BPS in the drinking water of female BALB/c mice (F0) from one week before pregnancy until the weaning of F1 pups. The pups were sensitized with low doses of ovalbumin (OVA) injection on postnatal day 4 and inhalation of OVA two weeks later. Twenty-four hours after the last inhalation, allergen-specific IgE and IgG1 levels, airway inflammation, and hyperresponsiveness were assessed. Non-OVA-sensitized females were mated with non-exposed male mice for the next generation at eight weeks of age. The resulting pups were sensitized, and the asthma phenotype was examined up to F4. Pups exposed to BPS displayed an asthma phenotype in response to their sensitization. We observed enhanced asthma phenotype in the F1-F4 derived from BPS-exposed F0 females compared to those derived from non-exposed females. Maternal exposure to BPS caused the multigenerational effects on the development of experimental asthma.
{"title":"Transgenerational effects of bisphenol S exposure on the development of experimental asthma.","authors":"Terumi Midoro-Horiuti, Yoko Murakami, Kazuyo Kuzume, Rachel M Toler, Kangling Zhang","doi":"10.1080/26896583.2025.2507408","DOIUrl":"10.1080/26896583.2025.2507408","url":null,"abstract":"<p><p>Early exposure to bisphenol A (BPA) is associated with increased asthma prevalence. To examine the effects of the most widely used BPA substitute, bisphenol S (BPS), on the development of childhood asthma, we conducted the study using the mouse model of early exposure. To simulate the burden from the human chronic exposure, we used a short-term exposure with 10 µg/ml BPS in the drinking water of female BALB/c mice (F0) from one week before pregnancy until the weaning of F1 pups. The pups were sensitized with low doses of ovalbumin (OVA) injection on postnatal day 4 and inhalation of OVA two weeks later. Twenty-four hours after the last inhalation, allergen-specific IgE and IgG1 levels, airway inflammation, and hyperresponsiveness were assessed. Non-OVA-sensitized females were mated with non-exposed male mice for the next generation at eight weeks of age. The resulting pups were sensitized, and the asthma phenotype was examined up to F4. Pups exposed to BPS displayed an asthma phenotype in response to their sensitization. We observed enhanced asthma phenotype in the F1-F4 derived from BPS-exposed F0 females compared to those derived from non-exposed females. Maternal exposure to BPS caused the multigenerational effects on the development of experimental asthma.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"228-242"},"PeriodicalIF":2.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12303729/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144163422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2025-11-20DOI: 10.1080/26896583.2025.2578111
Sara J Zaat, Mathilda Monaghan, Maaike van Gerwen
Environmental contaminants potentially associated with thyroid cancer are found in Superfund sites, areas the United States Environmental Protection Agency (EPA) has listed for cleanup. This study investigated the association between thyroid cancer incidence rates and Superfund density for sites containing certain contaminants that have been found to be potentially associated with thyroid cancer. Public data on thyroid cancer incidence rates (2015-2019; U.S. Centers for Disease Control and Prevention) and Superfund sites (1980-2014; EPA) were used. Multiple linear regressions were conducted to account for potential confounders, including income, race, and ethnicity. The results showed significant, positive correlations between thyroid cancer incidence rates and log Superfund density in counties with at least one Superfund site for total incidence (B = 0.897, SE = 0.169, p < 0.001), female incidence (B = 1.363, SE = 0.169, p < 0.001), and male incidence (B = 0.438, SE = 0.169, p = 0.010). On sensitivity tests of all counties, including those with zero sites, only female thyroid cancer incidence rate was positively, significantly associated with log Superfund density (B = 0.264, SE = 0.053, p < 0.001). Future studies may assess thyroid cancer incidence, Superfund sites, and covariates at the individual and community levels.
在美国环境保护署(EPA)列出的清理区域中,发现了可能与甲状腺癌有关的环境污染物。本研究调查了甲状腺癌发病率与含有某些已被发现与甲状腺癌有潜在关联的污染物的场所的超级基金密度之间的关系。使用甲状腺癌发病率的公共数据(2015-2019;美国疾病控制和预防中心)和超级基金网站(1980-2014;EPA)。进行了多重线性回归,以解释潜在的混杂因素,包括收入、种族和民族。结果显示,在总发病率至少有一个超级基金站点的县,甲状腺癌发病率与对数超级基金密度呈显著正相关(B = 0.897, SE = 0.169, p B = 1.363, SE = 0.169, p B = 0.438, SE = 0.169, p = 0.010)。在所有县(包括没有站点的县)的敏感性试验中,只有女性甲状腺癌发病率与log Superfund密度呈正相关(B = 0.264, SE = 0.053, p
{"title":"An ecological study of Superfund contaminants and thyroid cancer incidence in the United States.","authors":"Sara J Zaat, Mathilda Monaghan, Maaike van Gerwen","doi":"10.1080/26896583.2025.2578111","DOIUrl":"10.1080/26896583.2025.2578111","url":null,"abstract":"<p><p>Environmental contaminants potentially associated with thyroid cancer are found in Superfund sites, areas the United States Environmental Protection Agency (EPA) has listed for cleanup. This study investigated the association between thyroid cancer incidence rates and Superfund density for sites containing certain contaminants that have been found to be potentially associated with thyroid cancer. Public data on thyroid cancer incidence rates (2015-2019; U.S. Centers for Disease Control and Prevention) and Superfund sites (1980-2014; EPA) were used. Multiple linear regressions were conducted to account for potential confounders, including income, race, and ethnicity. The results showed significant, positive correlations between thyroid cancer incidence rates and log Superfund density in counties with at least one Superfund site for total incidence (<i>B</i> = 0.897, SE = 0.169, <i>p</i> < 0.001), female incidence (<i>B</i> = 1.363, SE = 0.169, <i>p</i> < 0.001), and male incidence (<i>B</i> = 0.438, SE = 0.169, <i>p</i> = 0.010). On sensitivity tests of all counties, including those with zero sites, only female thyroid cancer incidence rate was positively, significantly associated with log Superfund density (<i>B</i> = 0.264, SE = 0.053, <i>p</i> < 0.001). Future studies may assess thyroid cancer incidence, Superfund sites, and covariates at the individual and community levels.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"356-373"},"PeriodicalIF":2.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145566359","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-11-15DOI: 10.1080/26896583.2024.2424091
Xiaobo He, Qingsu Xia, Matthew S Bryant, Peter P Fu
Pyrrolizidine alkaloids (PAs) form a family of toxic and carcinogenic phytochemicals found in plants worldwide. The metabolism of toxic PAs, both in vivo and in vitro, generates four (±)-6,7-dihydro-7-hydroxy-1-hydroxymethyl-5H-pyrrolizine (DHP)-derived DNA adducts, namely, DHP-dG-3, DHP-dG-4, DHP-dA-3, and DHP-dA-4, as documented in previous research. We have proposed that these DHP-DNA adducts play a pivotal role in the induction of liver tumor by PAs in rats and mice, serving as potential common biological biomarkers for PA exposure and carcinogenesis. In this study, we found that the metabolism of PAs and PA N-oxides by human liver microsomes, in the presence of calf thymus DNA, results in the formation of DNA adducts. This process serves as a convenient and biologically significant platform for investigating the structure-carcinogenicity relationships of PAs.
吡咯里西啶生物碱(Pyrrolizidine alkaloids,PAs)是一种有毒的致癌植物化学物质,存在于世界各地的植物中。有毒 PAs 在体内和体外代谢过程中会产生四种 (±)-6,7- 二氢-7-羟基-1-羟甲基-5H-吡咯烷(DHP)衍生的 DNA 加合物,即 DHP-dG-3、DHP-dG-4、DHP-dA-3 和 DHP-dA-4。我们提出,这些 DHP-DNA 加合物在 PA 诱导大鼠和小鼠肝脏肿瘤的过程中起着关键作用,是 PA 暴露和致癌的潜在共同生物标志物。在这项研究中,我们发现在小牛胸腺 DNA 存在的情况下,人肝脏微粒体对 PAs 和 PA N-oxides 的代谢会形成 DNA 加合物。这一过程为研究 PA 的结构-致癌性关系提供了一个方便且具有生物学意义的平台。
{"title":"An efficient enzymatic system for studying structure-carcinogenicity relationships: metabolism of pyrrolizidine alkaloids by human liver microsomes in the presence of calf thymus DNA, resulting in the formation of DNA adducts.","authors":"Xiaobo He, Qingsu Xia, Matthew S Bryant, Peter P Fu","doi":"10.1080/26896583.2024.2424091","DOIUrl":"10.1080/26896583.2024.2424091","url":null,"abstract":"<p><p>Pyrrolizidine alkaloids (PAs) form a family of toxic and carcinogenic phytochemicals found in plants worldwide. The metabolism of toxic PAs, both <i>in vivo</i> and <i>in vitro</i>, generates four (±)-6,7-dihydro-7-hydroxy-1-hydroxymethyl-5<i>H</i>-pyrrolizine (DHP)-derived DNA adducts, namely, DHP-dG-3, DHP-dG-4, DHP-dA-3, and DHP-dA-4, as documented in previous research. We have proposed that these DHP-DNA adducts play a pivotal role in the induction of liver tumor by PAs in rats and mice, serving as potential common biological biomarkers for PA exposure and carcinogenesis. In this study, we found that the metabolism of PAs and PA <i>N</i>-oxides by human liver microsomes, in the presence of calf thymus DNA, results in the formation of DNA adducts. This process serves as a convenient and biologically significant platform for investigating the structure-carcinogenicity relationships of PAs.</p>","PeriodicalId":53200,"journal":{"name":"Journal of Environmental Science and Health Part C-Toxicology and Carcinogenesis","volume":" ","pages":"117-132"},"PeriodicalIF":1.2,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142640419","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}