Yellow rust disease caused by Puccinia striiformis f. sp. tritici is one of the major threats to wheat production in Ethiopia. In this paper, the impact of yellow rust on the physical qualities of bread wheat was studied. For this purpose, combinations of four bread wheat varieties (Digalu, Hidase, Danda'a, and Honkolo) and two fungicides (Nativo SC 300 and Tilt® 250E.C.) were tested at two different hotspot areas (Albazar and Alicho) in the Silte Zone, Southern Ethiopia, under natural epidemics of the disease during the 2018 growing season. A randomized complete block design in factorial arrangement with three replications was used to set up the experiment. A significant (p < .01) increase in hectoliters weight and wet gluten content were observed due to the application of Nativo SC 300; however, grain protein content did not respond significantly (p > .01) at both locations. Wheat varieties with high yellow rust severity exhibited maximum values of area under the disease progress curve and physical quality loss percentage (%). The highly susceptible wheat variety Digalu exhibited the highest values of hectoliter weight losses (%), and the actual losses ranged from 5.5% to 29.5%. Except for grain protein content, there was a significant negative correlation between the values of terminal rust severity, average coefficient infection, and area under the disease progress curve and that of hectoliters weight and wet gluten content, with correlation coefficients ranging from −0.85** to −0.33**. It is possible to improve the physiochemical properties of bread wheat through the application of foliar fungicides by selecting the appropriate genotypes that have an acceptable level of resistance to yellow rust.
{"title":"Impact of managing yellow rust (Puccinia striiformis f.sp. tritici) by the use of fungicide sprays and resistant varieties on the physiochemical qualities of bread wheat","authors":"Metiku Kebede, Elfinesh Shikur, Fikre Handaro","doi":"10.1002/fes3.526","DOIUrl":"https://doi.org/10.1002/fes3.526","url":null,"abstract":"<p>Yellow rust disease caused by <i>Puccinia striiformis</i> f. sp. <i>tritici</i> is one of the major threats to wheat production in Ethiopia. In this paper, the impact of yellow rust on the physical qualities of bread wheat was studied. For this purpose, combinations of four bread wheat varieties (Digalu, Hidase, Danda'a, and Honkolo) and two fungicides (Nativo SC 300 and Tilt® 250E.C.) were tested at two different hotspot areas (Albazar and Alicho) in the Silte Zone, Southern Ethiopia, under natural epidemics of the disease during the 2018 growing season. A randomized complete block design in factorial arrangement with three replications was used to set up the experiment. A significant (<i>p</i> < .01) increase in hectoliters weight and wet gluten content were observed due to the application of Nativo SC 300; however, grain protein content did not respond significantly (<i>p</i> > .01) at both locations. Wheat varieties with high yellow rust severity exhibited maximum values of area under the disease progress curve and physical quality loss percentage (%). The highly susceptible wheat variety Digalu exhibited the highest values of hectoliter weight losses (%), and the actual losses ranged from 5.5% to 29.5%. Except for grain protein content, there was a significant negative correlation between the values of terminal rust severity, average coefficient infection, and area under the disease progress curve and that of hectoliters weight and wet gluten content, with correlation coefficients ranging from −0.85** to −0.33**. It is possible to improve the physiochemical properties of bread wheat through the application of foliar fungicides by selecting the appropriate genotypes that have an acceptable level of resistance to yellow rust.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.526","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139676557","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maltase Mutanda, Vincent Chaplot, Hussein Shimelis, Kwame W. Shamuyarira, Sandiswa Figlan
<p>Field assessments of crop water use efficiency (WUE) are resource-consuming since they require simultaneous assessment of the total amount of water assimilated by crops for biomass and/or grain production. Alternative methods exist, such as estimating the carbon isotopic ratio (<sup>13</sup>C/<sup>12</sup>C) of the crop's leaf, aboveground biomass, or grain samples. There is limited information on the determinants of the accuracy of carbon isotopes in estimating water use efficiency between crop types and environments. Therefore, this study aimed to evaluate the extent to which the estimation of the <sup>13</sup>C/<sup>12</sup>C ratio in crop parts constitutes an accurate proxy of WUE, globally. Data on observed WUE (WUE<sub>obs</sub>) were collated involving 518 experiments conducted worldwide on major cereals and legumes and compared with WUE estimates (WUE<sub>est</sub>) from carbon isotopes. The mean WUE<sub>obs</sub> among all experiments was 3.4 g L<sup>−1</sup> and the mean absolute error (MAE) was 0.5 g L<sup>−1</sup> or 14.7% of WUE<sub>obs</sub>, corresponding to accurate predictions at <i>p</i> < 0.05. However, the percentage mean absolute error of observed water use efficiency (%MAE) estimated from grains was 3.6 ± 11.5%, which was lower than the %MAE from aboveground biomass collected at harvest (3 ± 22.8%). In addition, the %MAE increased from 1.1 ± 5.1% for soybean, 1.6 ± 7.2% for maize, 1.2 ± 8.6% for rice, 1.8 ± 12.1% for groundnut, 2.1 ± 14.3% for cowpea, 2.3 ± 16.2% for bush bean, 1.8 ± 19.9% for wheat, 2.2 ± 21.4% for barley to 6.3 ± 39.3% for oat, with only the latter corresponding to significant errors. WUE<sub>est</sub> were, in all cases, unbiased but slightly overestimated from 0.8% (maize) to 15.4% (oat). The accuracy in estimating WUE significantly decreased with the increase in soil clay content, with sand, showing a positive correlation of 0.3 with %MAE, but negatively correlated with the silt content (<i>r</i> = −0.4). Furthermore, a multivariate analysis pointed out a tendency for prediction errors and bias to increase with the decrease in WUE<sub>obs</sub> and air temperature. Using carbon isotopes for estimating crop WUE thus appeared reliable for all crops and world environments, provided grain samples are considered. The technique tended to perform better under high WUE conditions, such as those generally found in maize and soybean cropping systems. The identified factors that affect the accuracy of using carbon isotopes in measuring WUE provide valuable insights for water resource management and sustainable crop production. These findings contribute to the ongoing discourse on water conservation strategies in agriculture, offering a basis for decision-making in crop improvement programs. Implementing the recommended practices from this study can potentially improve yield gains and promote resilient and sustainable agricultural systems in the changing environmental circumstances. Further research should in
{"title":"Determinants of the accuracy of using carbon isotopes in estimating water use efficiency of selected cereal and legume crops: A global perspective","authors":"Maltase Mutanda, Vincent Chaplot, Hussein Shimelis, Kwame W. Shamuyarira, Sandiswa Figlan","doi":"10.1002/fes3.522","DOIUrl":"https://doi.org/10.1002/fes3.522","url":null,"abstract":"<p>Field assessments of crop water use efficiency (WUE) are resource-consuming since they require simultaneous assessment of the total amount of water assimilated by crops for biomass and/or grain production. Alternative methods exist, such as estimating the carbon isotopic ratio (<sup>13</sup>C/<sup>12</sup>C) of the crop's leaf, aboveground biomass, or grain samples. There is limited information on the determinants of the accuracy of carbon isotopes in estimating water use efficiency between crop types and environments. Therefore, this study aimed to evaluate the extent to which the estimation of the <sup>13</sup>C/<sup>12</sup>C ratio in crop parts constitutes an accurate proxy of WUE, globally. Data on observed WUE (WUE<sub>obs</sub>) were collated involving 518 experiments conducted worldwide on major cereals and legumes and compared with WUE estimates (WUE<sub>est</sub>) from carbon isotopes. The mean WUE<sub>obs</sub> among all experiments was 3.4 g L<sup>−1</sup> and the mean absolute error (MAE) was 0.5 g L<sup>−1</sup> or 14.7% of WUE<sub>obs</sub>, corresponding to accurate predictions at <i>p</i> < 0.05. However, the percentage mean absolute error of observed water use efficiency (%MAE) estimated from grains was 3.6 ± 11.5%, which was lower than the %MAE from aboveground biomass collected at harvest (3 ± 22.8%). In addition, the %MAE increased from 1.1 ± 5.1% for soybean, 1.6 ± 7.2% for maize, 1.2 ± 8.6% for rice, 1.8 ± 12.1% for groundnut, 2.1 ± 14.3% for cowpea, 2.3 ± 16.2% for bush bean, 1.8 ± 19.9% for wheat, 2.2 ± 21.4% for barley to 6.3 ± 39.3% for oat, with only the latter corresponding to significant errors. WUE<sub>est</sub> were, in all cases, unbiased but slightly overestimated from 0.8% (maize) to 15.4% (oat). The accuracy in estimating WUE significantly decreased with the increase in soil clay content, with sand, showing a positive correlation of 0.3 with %MAE, but negatively correlated with the silt content (<i>r</i> = −0.4). Furthermore, a multivariate analysis pointed out a tendency for prediction errors and bias to increase with the decrease in WUE<sub>obs</sub> and air temperature. Using carbon isotopes for estimating crop WUE thus appeared reliable for all crops and world environments, provided grain samples are considered. The technique tended to perform better under high WUE conditions, such as those generally found in maize and soybean cropping systems. The identified factors that affect the accuracy of using carbon isotopes in measuring WUE provide valuable insights for water resource management and sustainable crop production. These findings contribute to the ongoing discourse on water conservation strategies in agriculture, offering a basis for decision-making in crop improvement programs. Implementing the recommended practices from this study can potentially improve yield gains and promote resilient and sustainable agricultural systems in the changing environmental circumstances. Further research should in","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2024-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.522","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139550297","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Agroforestry in Nepal is a multifaceted and sustainable approach that harmonizes agricultural, environmental, and socioeconomic goals. This study conducted a comprehensive review of agroforestry systems in Nepal, emphasizing their impact on food security, rural livelihoods, and environmental sustainability. By bridging research gaps and highlighting environmental advantages, it provides valuable insights for evidence-based policymaking, making it a significant resource for Nepal and beyond. The study employed a comprehensive desktop review methodology using a PRISMA Flow Diagram for data collection and utilized academic databases to include literature related to agroforestry practices, their impacts, and associated socioeconomic and environmental aspects. Agroforestry systems in Nepal offer a comprehensive approach to sustainable agriculture, economic empowerment, and environmental conservation while enhancing resilience to climate change. While these systems provide multiple benefits, including enhanced soil quality and increased carbon sequestration, they also face challenges related to technical knowledge and market access. To fully harness the potential of agroforestry and address food (SDG 2), and energy security, and land degradation, bridging the gap between researchers and farmers, promoting information dissemination, and establishing support mechanisms are essential. Aligning with government strategies and international initiatives can pave the way for a more sustainable and prosperous future for Nepal's rural communities and environment.
{"title":"Agroforestry systems in Nepal: Enhancing food security and rural livelihoods – a comprehensive review","authors":"Manisha Ghimire, Ashish Khanal, Deepa Bhatt, DhirajDatta Dahal, Suja Giri","doi":"10.1002/fes3.524","DOIUrl":"10.1002/fes3.524","url":null,"abstract":"<p>Agroforestry in Nepal is a multifaceted and sustainable approach that harmonizes agricultural, environmental, and socioeconomic goals. This study conducted a comprehensive review of agroforestry systems in Nepal, emphasizing their impact on food security, rural livelihoods, and environmental sustainability. By bridging research gaps and highlighting environmental advantages, it provides valuable insights for evidence-based policymaking, making it a significant resource for Nepal and beyond. The study employed a comprehensive desktop review methodology using a PRISMA Flow Diagram for data collection and utilized academic databases to include literature related to agroforestry practices, their impacts, and associated socioeconomic and environmental aspects. Agroforestry systems in Nepal offer a comprehensive approach to sustainable agriculture, economic empowerment, and environmental conservation while enhancing resilience to climate change. While these systems provide multiple benefits, including enhanced soil quality and increased carbon sequestration, they also face challenges related to technical knowledge and market access. To fully harness the potential of agroforestry and address food (SDG 2), and energy security, and land degradation, bridging the gap between researchers and farmers, promoting information dissemination, and establishing support mechanisms are essential. Aligning with government strategies and international initiatives can pave the way for a more sustainable and prosperous future for Nepal's rural communities and environment.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2024-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.524","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139635356","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Kieron Moller, A. Pouyan Nejadhashemi, Muhammad Talha, Mervis Chikafa, Rasu Eeswaran, Nilson Vieira Junior, Ana Julia Paula Carcedo, Ignacio Ciampitti, Jean-Claude Bizimana, Amadiane Diallo, P. V. Vara Prasad
In Senegal, agriculture is an important sector underpinning the socioeconomic fabric of the populace. Notably, the agricultural production in this region exhibits heightened sensitivity to climatic perturbations, particularly droughts and heat waves. This study aims to determine the resilience of different agronomic interventions for farmers practicing mixed farming that produce both crops (i.e., groundnut (Arachis hypogaea L.) and pearl millet (Pennisetum glaucum (L.) R. Br.)) and raise animals in the Groundnut Basin in Senegal, which holds historical and socioeconomic significance. To understand the current situation regarding demographics, economics, consumption behavior, and farm operations for smallholder farmers, data were comprehensively collected from government and nongovernment organizations (NGO) reports, scientific papers, organization databases, and surveys. Additionally, the Agricultural Production Systems sIMulator (APSIM) was used to understand how combinations of three planting dates, three plant densities, and six urea nitrogen (N) fertilizer rates affected the yield of pearl millet, which were used as the alternative scenarios to the baseline in the farm modeling and analyses. All the collected and generated data were used as inputs into the Farm Simulation Model (FARMSIM) to generate economic, nutritional, and risk data associated with mixed farming systems. The generated data were then used to determine the resilience of the alternative scenarios against the baseline. Initially, a multi-objective optimization was employed to meet nutritional needs while maintaining a healthy diet at the lowest cost. Then, the scenarios that met the population's nutritional requirements were evaluated based on four economic indicators: net cash farm income (NCFI), ending cash reserves (EC), net present value (NPV), and internal rate of return (IRR). Lastly, those that passed the economic feasibility test were ranked based on risk criteria certainty equivalent (CE) and risk premium (RP). The analyses found N fertilizer rates of 0, 20, and 100 kg N ha−1 were generally economically not feasible. Additionally, medium (early-July to late-August) and late (late-July to mid-September) planting dates generally performed better than early (early-June to late-July) planting dates, while plant densities of 3.3 and 6.6 pL m−2 performed better than 1.1. The robust resilience approach introduced in this study is easily transferable to other regions.
{"title":"Unveiling the resilience of smallholder farmers in Senegal amidst extreme climate conditions","authors":"Kieron Moller, A. Pouyan Nejadhashemi, Muhammad Talha, Mervis Chikafa, Rasu Eeswaran, Nilson Vieira Junior, Ana Julia Paula Carcedo, Ignacio Ciampitti, Jean-Claude Bizimana, Amadiane Diallo, P. V. Vara Prasad","doi":"10.1002/fes3.523","DOIUrl":"https://doi.org/10.1002/fes3.523","url":null,"abstract":"<p>In Senegal, agriculture is an important sector underpinning the socioeconomic fabric of the populace. Notably, the agricultural production in this region exhibits heightened sensitivity to climatic perturbations, particularly droughts and heat waves. This study aims to determine the resilience of different agronomic interventions for farmers practicing mixed farming that produce both crops (i.e., groundnut (<i>Arachis hypogaea</i> L.) and pearl millet (<i>Pennisetum glaucum</i> (L.) R. Br.)) and raise animals in the Groundnut Basin in Senegal, which holds historical and socioeconomic significance. To understand the current situation regarding demographics, economics, consumption behavior, and farm operations for smallholder farmers, data were comprehensively collected from government and nongovernment organizations (NGO) reports, scientific papers, organization databases, and surveys. Additionally, the Agricultural Production Systems sIMulator (APSIM) was used to understand how combinations of three planting dates, three plant densities, and six urea nitrogen (N) fertilizer rates affected the yield of pearl millet, which were used as the alternative scenarios to the baseline in the farm modeling and analyses. All the collected and generated data were used as inputs into the Farm Simulation Model (FARMSIM) to generate economic, nutritional, and risk data associated with mixed farming systems. The generated data were then used to determine the resilience of the alternative scenarios against the baseline. Initially, a multi-objective optimization was employed to meet nutritional needs while maintaining a healthy diet at the lowest cost. Then, the scenarios that met the population's nutritional requirements were evaluated based on four economic indicators: net cash farm income (NCFI), ending cash reserves (EC), net present value (NPV), and internal rate of return (IRR). Lastly, those that passed the economic feasibility test were ranked based on risk criteria certainty equivalent (CE) and risk premium (RP). The analyses found N fertilizer rates of 0, 20, and 100 kg N ha<sup>−1</sup> were generally economically not feasible. Additionally, medium (early-July to late-August) and late (late-July to mid-September) planting dates generally performed better than early (early-June to late-July) planting dates, while plant densities of 3.3 and 6.6 pL m<sup>−2</sup> performed better than 1.1. The robust resilience approach introduced in this study is easily transferable to other regions.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2024-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.523","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139550533","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Kangkang Zhang, Zaid Khan, Mohammad Nauman Khan, Tao Luo, Lijun Luo, Junguo Bi, Liyong Hu
Rapeseed meal, a nutritious organic fertilizer (OF), contributes to improving soil environment and crop productivity. However, there are also problems, namely slow fertilizer efficiency and low nutrient utilization during the growing season. This 2-year field trial was conducted to explore the effect of biochar addition on improving the nutrient availability of OF through a comparative study of various biochar application rates under rice-rapeseed rotation conditions. The findings revealed that, compared to the individual application of chemical fertilizers (CF), OF alone decreased rice yield (2%/2%) and rapeseed yield (6%/10%) in 2019/2020. Compared with OF, combining biochar (15 t ha−1) with OF (OF + B15) significantly increased rice yield (17%/10%) and rapeseed yield (25%/20%) in the first/second year. Additionally, OF + B15 still increased rice yield (14%/7%) and rapeseed yield (12%/13%) for two consecutive years compared to CF. The co-application of biochar and OF had positive impacts on soil physicochemical properties and enzymes. Compared to OF, OF + B15 elevated soil organic carbon (SOC) by 57%–81%, soil catalase 19%, invertase 14%–20%, urease 17%–19%, and phosphatase 13%–17% during rice season, and similarly increased SOC by 77%–90%, soil catalase 14%–16%, invertase 14%–20%, urease 18%–24%, and phosphatase 16%–17% in rapeseed season. Biochar addition improved soil conditions and enzymatic activities, and the available nutrient supply of OF. Also, the co-application of biochar and rapeseed meal surpassed the effect of chemical fertilizer alone on the growth and yield of crops. Therefore, biochar coupling with organic fertilizer is an effective fertilization strategy based on resource recycling, which promotes both crop yield and sustainable agriculture.
菜籽粕是一种营养丰富的有机肥料(OF),有助于改善土壤环境和提高作物产量。但同时也存在一些问题,即肥效慢、生长季节养分利用率低。本田间试验为期两年,通过对水稻-油菜籽轮作条件下各种生物炭施用量的比较研究,探讨了添加生物炭对提高有机肥养分利用率的影响。研究结果表明,与单独施用化肥(CF)相比,2019/2020 年单独施用 OF 会降低水稻产量(2%/2%)和油菜籽产量(6%/10%)。与单独施用化肥相比,将生物炭(15 吨/公顷-1)与单独施用化肥相结合(OF + B15)可显著提高第一年/第二年的水稻产量(17%/10%)和油菜籽产量(25%/20%)。此外,与 CF 相比,OF + B15 仍可连续两年提高水稻产量(14%/7%)和油菜籽产量(12%/13%)。生物炭和 OF 的共同施用对土壤理化性质和酶产生了积极影响。与 OF 相比,OF + B15 在水稻季提高了土壤有机碳(SOC)57%-81%、土壤过氧化氢酶 19%、转化酶 14%-20%、脲酶 17%-19%、磷酸酶 13%-17%;在油菜季同样提高了土壤有机碳 77%-90%、土壤过氧化氢酶 14%-16%、转化酶 14%-20%、脲酶 18%-24%、磷酸酶 16%-17%。添加生物炭改善了土壤条件和酶活性,增加了 OF 的养分供应。同时,生物炭和菜籽粕的共同施用对作物生长和产量的影响超过了单独施用化肥。因此,生物炭与有机肥耦合是一种基于资源循环利用的有效施肥策略,既能提高作物产量,又能促进农业可持续发展。
{"title":"The application of biochar improves the nutrient supply efficiency of organic fertilizer, sustains soil quality and promotes sustainable crop production","authors":"Kangkang Zhang, Zaid Khan, Mohammad Nauman Khan, Tao Luo, Lijun Luo, Junguo Bi, Liyong Hu","doi":"10.1002/fes3.520","DOIUrl":"https://doi.org/10.1002/fes3.520","url":null,"abstract":"<p>Rapeseed meal, a nutritious organic fertilizer (OF), contributes to improving soil environment and crop productivity. However, there are also problems, namely slow fertilizer efficiency and low nutrient utilization during the growing season. This 2-year field trial was conducted to explore the effect of biochar addition on improving the nutrient availability of OF through a comparative study of various biochar application rates under rice-rapeseed rotation conditions. The findings revealed that, compared to the individual application of chemical fertilizers (CF), OF alone decreased rice yield (2%/2%) and rapeseed yield (6%/10%) in 2019/2020. Compared with OF, combining biochar (15 t ha<sup>−1</sup>) with OF (OF + B15) significantly increased rice yield (17%/10%) and rapeseed yield (25%/20%) in the first/second year. Additionally, OF + B15 still increased rice yield (14%/7%) and rapeseed yield (12%/13%) for two consecutive years compared to CF. The co-application of biochar and OF had positive impacts on soil physicochemical properties and enzymes. Compared to OF, OF + B15 elevated soil organic carbon (SOC) by 57%–81%, soil catalase 19%, invertase 14%–20%, urease 17%–19%, and phosphatase 13%–17% during rice season, and similarly increased SOC by 77%–90%, soil catalase 14%–16%, invertase 14%–20%, urease 18%–24%, and phosphatase 16%–17% in rapeseed season. Biochar addition improved soil conditions and enzymatic activities, and the available nutrient supply of OF. Also, the co-application of biochar and rapeseed meal surpassed the effect of chemical fertilizer alone on the growth and yield of crops. Therefore, biochar coupling with organic fertilizer is an effective fertilization strategy based on resource recycling, which promotes both crop yield and sustainable agriculture.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2024-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.520","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139473968","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lateral roots, including adventitious roots, are the main component of rapeseed roots with support, absorb, and synthesis functions and their morphological parameters directly affecting the plant's aboveground growth and yield. Root biomass, as a material base for lateral root growth, can be used as a link between plant phenotypes and their physiological processes, as well as to enhance root 3D growth model mechanisms and accuracy. To quantify the relationships between lateral root morphological indices and the corresponding organ biomass for rapeseed, we used two cultivars, NY 22 (conventional) and NZ 1818 (hybrid), and conducted cultivar and fertilizing cylindrical tube experiments during the 2016–2019, with two fertilizer levels, no fertilizer, and 180 kg N ha−1 fertilizer. The lateral root biomass and morphological parameters were determined during the whole growth period. The biomass-based lateral root morphological parameter models were developed by analyzing the quantitative relationship between the lateral root morphological indices and their corresponding biomass, and the descriptive models were verified with independent experimental data. The results showed that the correlation (r) of simulated and observed values for the lateral root morphological parameters are all greater than 0.9 with significant levels at p < 0.001. The absolute values of the average absolute difference (da) of simulated and observed values for the lateral root length (LLR), lateral root average diameter (ADLR), lateral root surface area (SALR), and lateral root volume (VLR) are −30.408 cm, −0.003 mm, 12.902 cm2, and 0.039 cm3, respectively. The RMSE values are 175.183 cm, 0.010 mm, 59.710 cm2, and 1.513 cm3, respectively. The ratio of da to the average observed values (dap) for the LLR and VLR are all less than 5%, and the ADLR and SALR are all <6%. The models developed in this paper have good performance and reliability for predicting lateral root morphological parameters of rapeseed. The study provides a mechanistic method for linking the rapeseed growth model with the morphological model using corresponding organic biomass and laying a good foundation for establishing a 3D morphological model for rapeseed root system based on biomass.
侧根(包括不定根)是油菜根系的主要组成部分,具有支撑、吸收和合成功能,其形态参数直接影响植株的地上部生长和产量。根系生物量作为侧根生长的物质基础,可作为植物表型与其生理过程之间的联系,也可用于增强根系三维生长模型的机制和准确性。为了量化油菜侧根形态指标与相应器官生物量之间的关系,我们选用 NY 22(常规)和 NZ 1818(杂交)两个栽培品种,在 2016-2019 年期间进行了栽培品种和施肥圆筒管试验,施肥水平有两种,分别为不施肥和 180 kg N ha-1 肥料。测定了整个生长期的侧根生物量和形态参数。通过分析侧根形态指标与其相应生物量之间的定量关系,建立了基于生物量的侧根形态参数模型,并用独立的实验数据对描述性模型进行了验证。结果表明,侧根形态参数的模拟值与观测值的相关性(r)均大于 0.9,显著水平为 p <0.001。侧根长度(LLR)、侧根平均直径(ADLR)、侧根表面积(SALR)和侧根体积(VLR)的模拟值与观测值的平均绝对差值(da)分别为-30.408 cm、-0.003 mm、12.902 cm2 和 0.039 cm3。RMSE 值分别为 175.183 厘米、0.010 毫米、59.710 平方厘米和 1.513 立方厘米。LLR 和 VLR 的 da 与平均观测值之比(dap)均小于 5%,ADLR 和 SALR 均为 <6%。本文建立的模型在预测油菜侧根形态参数方面具有良好的性能和可靠性。该研究提供了利用相应有机生物量将油菜生长模型与形态模型联系起来的机理方法,为建立基于生物量的油菜根系三维形态模型奠定了良好的基础。
{"title":"Biomass-based lateral root morphological parameter models for rapeseed (Brassica napus L.)","authors":"Wei-xin Zhang, Qian Wu, Chuan-liang Sun, Dao-kuo Ge, Jing Cao, Wan-jie Liang, Ying-jun Yin, Hong Li, Hong-xin Cao, Wen-yu Zhang, Bai-ming Li, Yu-kai Xin","doi":"10.1002/fes3.519","DOIUrl":"https://doi.org/10.1002/fes3.519","url":null,"abstract":"<p>Lateral roots, including adventitious roots, are the main component of rapeseed roots with support, absorb, and synthesis functions and their morphological parameters directly affecting the plant's aboveground growth and yield. Root biomass, as a material base for lateral root growth, can be used as a link between plant phenotypes and their physiological processes, as well as to enhance root 3D growth model mechanisms and accuracy. To quantify the relationships between lateral root morphological indices and the corresponding organ biomass for rapeseed, we used two cultivars, NY 22 (conventional) and NZ 1818 (hybrid), and conducted cultivar and fertilizing cylindrical tube experiments during the 2016–2019, with two fertilizer levels, no fertilizer, and 180 kg N ha<sup>−1</sup> fertilizer. The lateral root biomass and morphological parameters were determined during the whole growth period. The biomass-based lateral root morphological parameter models were developed by analyzing the quantitative relationship between the lateral root morphological indices and their corresponding biomass, and the descriptive models were verified with independent experimental data. The results showed that the correlation (<i>r</i>) of simulated and observed values for the lateral root morphological parameters are all greater than 0.9 with significant levels at <i>p</i> < 0.001. The absolute values of the average absolute difference (<i>d</i><sub><i>a</i></sub>) of simulated and observed values for the lateral root length (L<sub>LR</sub>), lateral root average diameter (AD<sub>LR</sub>), lateral root surface area (SA<sub>LR</sub>), and lateral root volume (V<sub>LR</sub>) are −30.408 cm, −0.003 mm, 12.902 cm<sup>2</sup>, and 0.039 cm<sup>3</sup>, respectively. The <i>RMSE</i> values are 175.183 cm, 0.010 mm, 59.710 cm<sup>2</sup>, and 1.513 cm<sup>3</sup>, respectively. The ratio of <i>d</i><sub><i>a</i></sub> to the average observed values (<i>d</i><sub><i>ap</i></sub>) for the L<sub>LR</sub> and V<sub>LR</sub> are all less than 5%, and the AD<sub>LR</sub> and SA<sub>LR</sub> are all <6%. The models developed in this paper have good performance and reliability for predicting lateral root morphological parameters of rapeseed. The study provides a mechanistic method for linking the rapeseed growth model with the morphological model using corresponding organic biomass and laying a good foundation for establishing a 3D morphological model for rapeseed root system based on biomass.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2023-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.519","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139101144","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Keyan Ma, Dengpan Li, Xingcai Qi, Qiao Li, Yi Wu, Juanjuan Song, Yue Zhang, Hai Yang, Taotao Li, Youji Ma
The Longnan goat (LN) is a local breed discovered during the third census of China's livestock and poultry genetic resources. In order to thoroughly comprehend the population traits, this research examined a total of 70 animals from three different goat populations, namely the LN goat, Nanjiang Brown goat (NJ), and Boer goat (Boer). Specific-Locus Amplified Fragment Sequencing was employed to analyze genetic diversity, population structure, and selective sweep patterns. Additionally, individual DNA fingerprints were generated to provide detailed genetic profiles for each subject. A total of 643,868 single nucleotide polymorphisms (SNPs) were detected, with a majority located in intergenic and intronic regions. Genetic diversity analysis uncovered lower diversity within the LN population compared to the other two populations. The analysis of population structure unveiled significant genetic distance between LN and both NJ and Boer populations, with distinct clustering patterns observed. Moreover, genetic differentiation coefficients (FST) of 0.1019 and 0.0854 were determined between LN and Boer, as well as LN and NJ, respectively, indicating substantial genetic differentiation. Selective sweep analysis, combining FST and π ratio, identified several genes associated with growth and development, reproduction, hair color, and immunity that may serve as valuable candidates for marker-assisted breeding. Furthermore, identification of 47,541 runs of homozygosity (ROHs) revealed non-uniform distribution across chromosomes, with the highest frequency on chromosome 1 and the lowest on chromosome 27. Correlations between different inbreeding coefficients varied, with the highest observed between FHOM and FGRM, and the lowest between FROH >1.5Mb and FROH <500kb. A total of 46 candidate genes were annotated within high-frequency ROH islands, primarily associated with biological processes such as reproduction, growth and development, and immunity. Finally, a DNA fingerprint, consisting of 371 highly polymorphic SNPs, was generated and presented in the form of a two-dimensional code for convenient access. Based on the population structure analysis, LN goats have been found to have a distant genetic distance and a higher degree of differentiation from both the Boer and NJ populations. Evaluation of genetic diversity parameters and ROH analysis indicates that the LN population exhibits lower genetic diversity and shows signs of inbreeding. Our findings offer theoretical support for the identification of genetic resources within this population.
{"title":"Population structure, runs of homozygosity analysis and construction of single nucleotide polymorphism fingerprinting database of Longnan goat population","authors":"Keyan Ma, Dengpan Li, Xingcai Qi, Qiao Li, Yi Wu, Juanjuan Song, Yue Zhang, Hai Yang, Taotao Li, Youji Ma","doi":"10.1002/fes3.517","DOIUrl":"10.1002/fes3.517","url":null,"abstract":"<p>The Longnan goat (LN) is a local breed discovered during the third census of China's livestock and poultry genetic resources. In order to thoroughly comprehend the population traits, this research examined a total of 70 animals from three different goat populations, namely the LN goat, Nanjiang Brown goat (NJ), and Boer goat (Boer). Specific-Locus Amplified Fragment Sequencing was employed to analyze genetic diversity, population structure, and selective sweep patterns. Additionally, individual DNA fingerprints were generated to provide detailed genetic profiles for each subject. A total of 643,868 single nucleotide polymorphisms (SNPs) were detected, with a majority located in intergenic and intronic regions. Genetic diversity analysis uncovered lower diversity within the LN population compared to the other two populations. The analysis of population structure unveiled significant genetic distance between LN and both NJ and Boer populations, with distinct clustering patterns observed. Moreover, genetic differentiation coefficients (<i>F</i><sub>ST</sub>) of 0.1019 and 0.0854 were determined between LN and Boer, as well as LN and NJ, respectively, indicating substantial genetic differentiation. Selective sweep analysis, combining <i>F</i><sub>ST</sub> and π ratio, identified several genes associated with growth and development, reproduction, hair color, and immunity that may serve as valuable candidates for marker-assisted breeding. Furthermore, identification of 47,541 runs of homozygosity (ROHs) revealed non-uniform distribution across chromosomes, with the highest frequency on chromosome 1 and the lowest on chromosome 27. Correlations between different inbreeding coefficients varied, with the highest observed between <i>F</i><sub>HOM</sub> and <i>F</i><sub>GRM</sub>, and the lowest between <i>F</i><sub>ROH >1.5Mb</sub> and <i>F</i><sub>ROH <500kb</sub>. A total of 46 candidate genes were annotated within high-frequency ROH islands, primarily associated with biological processes such as reproduction, growth and development, and immunity. Finally, a DNA fingerprint, consisting of 371 highly polymorphic SNPs, was generated and presented in the form of a two-dimensional code for convenient access. Based on the population structure analysis, LN goats have been found to have a distant genetic distance and a higher degree of differentiation from both the Boer and NJ populations. Evaluation of genetic diversity parameters and ROH analysis indicates that the LN population exhibits lower genetic diversity and shows signs of inbreeding. Our findings offer theoretical support for the identification of genetic resources within this population.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2023-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.517","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138589755","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shanice Van Haeften, Caitlin Dudley, Yichen Kang, Daniel Smith, Ramakrishnan M. Nair, Colin A. Douglas, Andries Potgieter, Hannah Robinson, Lee T. Hickey, Millicent R. Smith
The cover image is based on the Review Article Building a better Mungbean: Breeding for reproductive resilience in a changing climate by Shanice Van Haeften et al., https://doi.org/10.1002/fes3.467. Image Credit: Megan Pope