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Impact of managing yellow rust (Puccinia striiformis f.sp. tritici) by the use of fungicide sprays and resistant varieties on the physiochemical qualities of bread wheat 通过喷洒杀真菌剂和使用抗病品种来控制黄锈病(条纹赤霉病 f.sp. tritici)对面包小麦理化品质的影响
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-02-01 DOI: 10.1002/fes3.526
Metiku Kebede, Elfinesh Shikur, Fikre Handaro

Yellow rust disease caused by Puccinia striiformis f. sp. tritici is one of the major threats to wheat production in Ethiopia. In this paper, the impact of yellow rust on the physical qualities of bread wheat was studied. For this purpose, combinations of four bread wheat varieties (Digalu, Hidase, Danda'a, and Honkolo) and two fungicides (Nativo SC 300 and Tilt® 250E.C.) were tested at two different hotspot areas (Albazar and Alicho) in the Silte Zone, Southern Ethiopia, under natural epidemics of the disease during the 2018 growing season. A randomized complete block design in factorial arrangement with three replications was used to set up the experiment. A significant (p < .01) increase in hectoliters weight and wet gluten content were observed due to the application of Nativo SC 300; however, grain protein content did not respond significantly (p > .01) at both locations. Wheat varieties with high yellow rust severity exhibited maximum values of area under the disease progress curve and physical quality loss percentage (%). The highly susceptible wheat variety Digalu exhibited the highest values of hectoliter weight losses (%), and the actual losses ranged from 5.5% to 29.5%. Except for grain protein content, there was a significant negative correlation between the values of terminal rust severity, average coefficient infection, and area under the disease progress curve and that of hectoliters weight and wet gluten content, with correlation coefficients ranging from −0.85** to −0.33**. It is possible to improve the physiochemical properties of bread wheat through the application of foliar fungicides by selecting the appropriate genotypes that have an acceptable level of resistance to yellow rust.

由条锈病菌(Puccinia striiformis f. sp. tritici)引起的黄锈病是埃塞俄比亚小麦生产的主要威胁之一。本文研究了黄锈病对面包小麦物理品质的影响。为此,在埃塞俄比亚南部锡尔特区的两个不同热点地区(Albazar 和 Alicho)测试了四个面包小麦品种(Digalu、Hidase、Danda'a 和 Honkolo)和两种杀菌剂(Nativo SC 300 和 Tilt® 250E.C.)的组合,在 2018 年生长季节,在该病自然流行的情况下进行了测试。试验采用了三次重复的随机完全区组设计。施用 Nativo SC 300 后,百粒重和湿面筋含量均有明显增加(p <.01);但两地的谷物蛋白质含量均无明显反应(p >.01)。黄锈病严重程度高的小麦品种表现出最大的病害进程曲线下面积值和物理品质损失百分比(%)。高感病小麦品种 Digalu 的百分之一百升重损失率(%)最高,实际损失率为 5.5% 至 29.5%。除谷物蛋白质含量外,顶端锈病严重程度、平均感染系数、病程曲线下面积的数值与百升重和湿面筋含量之间存在显著负相关,相关系数在-0.85**至-0.33**之间。通过施用叶面杀真菌剂,可以选择对黄锈病具有可接受抗性的适当基因型,从而改善面包小麦的理化特性。
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引用次数: 0
Determinants of the accuracy of using carbon isotopes in estimating water use efficiency of selected cereal and legume crops: A global perspective 利用碳同位素估算某些谷物和豆类作物水分利用效率的准确性的决定因素:全球视角
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-01-24 DOI: 10.1002/fes3.522
Maltase Mutanda, Vincent Chaplot, Hussein Shimelis, Kwame W. Shamuyarira, Sandiswa Figlan
<p>Field assessments of crop water use efficiency (WUE) are resource-consuming since they require simultaneous assessment of the total amount of water assimilated by crops for biomass and/or grain production. Alternative methods exist, such as estimating the carbon isotopic ratio (<sup>13</sup>C/<sup>12</sup>C) of the crop's leaf, aboveground biomass, or grain samples. There is limited information on the determinants of the accuracy of carbon isotopes in estimating water use efficiency between crop types and environments. Therefore, this study aimed to evaluate the extent to which the estimation of the <sup>13</sup>C/<sup>12</sup>C ratio in crop parts constitutes an accurate proxy of WUE, globally. Data on observed WUE (WUE<sub>obs</sub>) were collated involving 518 experiments conducted worldwide on major cereals and legumes and compared with WUE estimates (WUE<sub>est</sub>) from carbon isotopes. The mean WUE<sub>obs</sub> among all experiments was 3.4 g L<sup>−1</sup> and the mean absolute error (MAE) was 0.5 g L<sup>−1</sup> or 14.7% of WUE<sub>obs</sub>, corresponding to accurate predictions at <i>p</i> < 0.05. However, the percentage mean absolute error of observed water use efficiency (%MAE) estimated from grains was 3.6 ± 11.5%, which was lower than the %MAE from aboveground biomass collected at harvest (3 ± 22.8%). In addition, the %MAE increased from 1.1 ± 5.1% for soybean, 1.6 ± 7.2% for maize, 1.2 ± 8.6% for rice, 1.8 ± 12.1% for groundnut, 2.1 ± 14.3% for cowpea, 2.3 ± 16.2% for bush bean, 1.8 ± 19.9% for wheat, 2.2 ± 21.4% for barley to 6.3 ± 39.3% for oat, with only the latter corresponding to significant errors. WUE<sub>est</sub> were, in all cases, unbiased but slightly overestimated from 0.8% (maize) to 15.4% (oat). The accuracy in estimating WUE significantly decreased with the increase in soil clay content, with sand, showing a positive correlation of 0.3 with %MAE, but negatively correlated with the silt content (<i>r</i> = −0.4). Furthermore, a multivariate analysis pointed out a tendency for prediction errors and bias to increase with the decrease in WUE<sub>obs</sub> and air temperature. Using carbon isotopes for estimating crop WUE thus appeared reliable for all crops and world environments, provided grain samples are considered. The technique tended to perform better under high WUE conditions, such as those generally found in maize and soybean cropping systems. The identified factors that affect the accuracy of using carbon isotopes in measuring WUE provide valuable insights for water resource management and sustainable crop production. These findings contribute to the ongoing discourse on water conservation strategies in agriculture, offering a basis for decision-making in crop improvement programs. Implementing the recommended practices from this study can potentially improve yield gains and promote resilient and sustainable agricultural systems in the changing environmental circumstances. Further research should in
作物水分利用效率(WUE)的实地评估需要同时评估作物为生产生物量和/或谷物而吸收的水分总量,因此非常耗费资源。目前有一些替代方法,如估算作物叶片、地上生物量或谷物样本的碳同位素比值(13C/12C)。关于碳同位素在估算不同作物类型和环境的水分利用效率方面的准确性的决定因素,目前的信息还很有限。因此,本研究旨在评估在全球范围内,作物各部分 13C/12C 比率的估算在多大程度上可以准确替代水分利用效率。本研究整理了全球 518 个主要谷物和豆科植物试验中观察到的水分利用效率(WUEobs)数据,并与碳同位素得出的水分利用效率估计值(WUEest)进行了比较。所有实验的平均 WUEobs 为 3.4 g L-1,平均绝对误差(MAE)为 0.5 g L-1 或 WUEobs 的 14.7%,相当于在 p < 0.05 时的准确预测。然而,从谷粒估算的观测水分利用效率的平均绝对误差(%MAE)为 3.6 ± 11.5%,低于收获时采集的地上生物量的平均绝对误差(%MAE)(3 ± 22.8%)。此外,MAE%从大豆(1.1 ± 5.1%)、玉米(1.6 ± 7.2%)、水稻(1.2 ± 8.6%)、落花生(1.8 ± 12.1%)、豇豆(2.1 ± 14.3%)、灌木豆(2.3 ± 16.2%)、小麦(1.8 ± 19.9%)、大麦(2.2 ± 21.4%)到燕麦(6.3 ± 39.3%),只有后者存在显著误差。在所有情况下,WUEest 都没有偏差,但略微高估了 0.8%(玉米)至 15.4%(燕麦)。随着土壤粘土含量的增加,估算 WUE 的准确性明显降低,沙土与 %MAE 呈 0.3 的正相关,但与淤泥含量呈负相关(r = -0.4)。此外,多变量分析表明,随着 WUEobs 和气温的降低,预测误差和偏差有增加的趋势。因此,只要考虑到谷物样本,使用碳同位素估算作物WUE似乎对所有作物和世界环境都是可靠的。在高 WUE 条件下,如玉米和大豆种植系统中的高 WUE 条件下,该技术往往表现更佳。所发现的影响使用碳同位素测量WUE准确性的因素为水资源管理和可持续作物生产提供了宝贵的见解。这些发现有助于当前有关农业节水战略的讨论,为作物改良计划的决策提供依据。在不断变化的环境条件下,实施本研究推荐的做法有可能提高产量,促进农业系统的恢复能力和可持续发展。进一步的研究应探讨在干旱和凉爽环境下使用地上生物量同位素技术准确性低的机理。
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引用次数: 0
Agroforestry systems in Nepal: Enhancing food security and rural livelihoods – a comprehensive review 尼泊尔的农林系统:加强粮食安全和农村生计--全面审查
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-01-24 DOI: 10.1002/fes3.524
Manisha Ghimire, Ashish Khanal, Deepa Bhatt, DhirajDatta Dahal, Suja Giri

Agroforestry in Nepal is a multifaceted and sustainable approach that harmonizes agricultural, environmental, and socioeconomic goals. This study conducted a comprehensive review of agroforestry systems in Nepal, emphasizing their impact on food security, rural livelihoods, and environmental sustainability. By bridging research gaps and highlighting environmental advantages, it provides valuable insights for evidence-based policymaking, making it a significant resource for Nepal and beyond. The study employed a comprehensive desktop review methodology using a PRISMA Flow Diagram for data collection and utilized academic databases to include literature related to agroforestry practices, their impacts, and associated socioeconomic and environmental aspects. Agroforestry systems in Nepal offer a comprehensive approach to sustainable agriculture, economic empowerment, and environmental conservation while enhancing resilience to climate change. While these systems provide multiple benefits, including enhanced soil quality and increased carbon sequestration, they also face challenges related to technical knowledge and market access. To fully harness the potential of agroforestry and address food (SDG 2), and energy security, and land degradation, bridging the gap between researchers and farmers, promoting information dissemination, and establishing support mechanisms are essential. Aligning with government strategies and international initiatives can pave the way for a more sustainable and prosperous future for Nepal's rural communities and environment.

尼泊尔的农林业是一种协调农业、环境和社会经济目标的多方面可持续方法。本研究全面回顾了尼泊尔的农林系统,强调了其对粮食安全、农村生计和环境可持续性的影响。通过弥合研究差距和强调环境优势,该研究为循证决策提供了宝贵的见解,使其成为尼泊尔及其他地区的重要资源。本研究采用了全面的桌面审查方法,使用 PRISMA 流程图进行数据收集,并利用学术数据库收录了与农林业实践、其影响以及相关的社会经济和环境方面有关的文献。尼泊尔的农林业系统为可持续农业、经济赋权和环境保护提供了一种综合方法,同时增强了对气候变化的适应能力。虽然这些系统提供了多种益处,包括提高土壤质量和增加碳固存,但它们也面临着与技术知识和市场准入有关的挑战。要充分利用农林业的潜力,解决粮食(可持续发展目标 2)、能源安全和土地退化问题,就必须缩小研究人员与农民之间的差距,促进信息传播,并建立支持机制。与政府战略和国际倡议保持一致,可以为尼泊尔农村社区和环境实现更加可持续和繁荣的未来铺平道路。
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引用次数: 0
Unveiling the resilience of smallholder farmers in Senegal amidst extreme climate conditions 揭示塞内加尔小农在极端气候条件下的恢复能力
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-01-23 DOI: 10.1002/fes3.523
Kieron Moller, A. Pouyan Nejadhashemi, Muhammad Talha, Mervis Chikafa, Rasu Eeswaran, Nilson Vieira Junior, Ana Julia Paula Carcedo, Ignacio Ciampitti, Jean-Claude Bizimana, Amadiane Diallo, P. V. Vara Prasad

In Senegal, agriculture is an important sector underpinning the socioeconomic fabric of the populace. Notably, the agricultural production in this region exhibits heightened sensitivity to climatic perturbations, particularly droughts and heat waves. This study aims to determine the resilience of different agronomic interventions for farmers practicing mixed farming that produce both crops (i.e., groundnut (Arachis hypogaea L.) and pearl millet (Pennisetum glaucum (L.) R. Br.)) and raise animals in the Groundnut Basin in Senegal, which holds historical and socioeconomic significance. To understand the current situation regarding demographics, economics, consumption behavior, and farm operations for smallholder farmers, data were comprehensively collected from government and nongovernment organizations (NGO) reports, scientific papers, organization databases, and surveys. Additionally, the Agricultural Production Systems sIMulator (APSIM) was used to understand how combinations of three planting dates, three plant densities, and six urea nitrogen (N) fertilizer rates affected the yield of pearl millet, which were used as the alternative scenarios to the baseline in the farm modeling and analyses. All the collected and generated data were used as inputs into the Farm Simulation Model (FARMSIM) to generate economic, nutritional, and risk data associated with mixed farming systems. The generated data were then used to determine the resilience of the alternative scenarios against the baseline. Initially, a multi-objective optimization was employed to meet nutritional needs while maintaining a healthy diet at the lowest cost. Then, the scenarios that met the population's nutritional requirements were evaluated based on four economic indicators: net cash farm income (NCFI), ending cash reserves (EC), net present value (NPV), and internal rate of return (IRR). Lastly, those that passed the economic feasibility test were ranked based on risk criteria certainty equivalent (CE) and risk premium (RP). The analyses found N fertilizer rates of 0, 20, and 100 kg N ha−1 were generally economically not feasible. Additionally, medium (early-July to late-August) and late (late-July to mid-September) planting dates generally performed better than early (early-June to late-July) planting dates, while plant densities of 3.3 and 6.6 pL m−2 performed better than 1.1. The robust resilience approach introduced in this study is easily transferable to other regions.

在塞内加尔,农业是支撑民众社会经济结构的重要部门。值得注意的是,该地区的农业生产对气候扰动(尤其是干旱和热浪)表现出高度敏感性。本研究旨在确定塞内加尔落花生盆地(具有重要的历史和社会经济意义)从事混合耕作的农民对不同农艺干预措施的适应能力,这些混合耕作既生产作物(即落花生(Arachis hypogaea L.)和珍珠粟(Pennisetum glaucum (L.) R. Br.),又饲养牲畜。为了解小农的人口、经济、消费行为和农场经营现状,我们从政府和非政府组织报告、科学论文、组织数据库和调查中全面收集了数据。此外,还利用农业生产系统模拟器(APSIM)了解三个播种日期、三种植物密度和六种尿素氮(N)施肥量的组合如何影响珍珠粟的产量,并将其作为农场建模和分析中基线的替代方案。所有收集和生成的数据都被用作农场模拟模型(FARMSIM)的输入,以生成与混合耕作系统相关的经济、营养和风险数据。然后,利用生成的数据确定替代方案相对于基线的复原力。最初,采用了多目标优化方法,以满足营养需求,同时以最低成本维持健康饮食。然后,根据以下四项经济指标对满足人口营养需求的方案进行评估:农场现金净收入(NCFI)、期末现金储备(EC)、净现值(NPV)和内部收益率(IRR)。最后,根据风险标准确定性当量(CE)和风险溢价(RP)对通过经济可行性测试的项目进行排序。分析发现,氮肥施用量为 0、20 和 100 千克/公顷时,经济上普遍不可行。此外,中等(7 月上旬至 8 月下旬)和晚期(7 月下旬至 9 月中旬)播种期的表现一般优于早期(6 月上旬至 7 月下旬)播种期,而 3.3 pL m-2 和 6.6 pL m-2 的植株密度的表现优于 1.1 pL m-2 的植株密度。本研究采用的稳健恢复力方法很容易推广到其他地区。
{"title":"Unveiling the resilience of smallholder farmers in Senegal amidst extreme climate conditions","authors":"Kieron Moller,&nbsp;A. Pouyan Nejadhashemi,&nbsp;Muhammad Talha,&nbsp;Mervis Chikafa,&nbsp;Rasu Eeswaran,&nbsp;Nilson Vieira Junior,&nbsp;Ana Julia Paula Carcedo,&nbsp;Ignacio Ciampitti,&nbsp;Jean-Claude Bizimana,&nbsp;Amadiane Diallo,&nbsp;P. V. Vara Prasad","doi":"10.1002/fes3.523","DOIUrl":"https://doi.org/10.1002/fes3.523","url":null,"abstract":"<p>In Senegal, agriculture is an important sector underpinning the socioeconomic fabric of the populace. Notably, the agricultural production in this region exhibits heightened sensitivity to climatic perturbations, particularly droughts and heat waves. This study aims to determine the resilience of different agronomic interventions for farmers practicing mixed farming that produce both crops (i.e., groundnut (<i>Arachis hypogaea</i> L.) and pearl millet (<i>Pennisetum glaucum</i> (L.) R. Br.)) and raise animals in the Groundnut Basin in Senegal, which holds historical and socioeconomic significance. To understand the current situation regarding demographics, economics, consumption behavior, and farm operations for smallholder farmers, data were comprehensively collected from government and nongovernment organizations (NGO) reports, scientific papers, organization databases, and surveys. Additionally, the Agricultural Production Systems sIMulator (APSIM) was used to understand how combinations of three planting dates, three plant densities, and six urea nitrogen (N) fertilizer rates affected the yield of pearl millet, which were used as the alternative scenarios to the baseline in the farm modeling and analyses. All the collected and generated data were used as inputs into the Farm Simulation Model (FARMSIM) to generate economic, nutritional, and risk data associated with mixed farming systems. The generated data were then used to determine the resilience of the alternative scenarios against the baseline. Initially, a multi-objective optimization was employed to meet nutritional needs while maintaining a healthy diet at the lowest cost. Then, the scenarios that met the population's nutritional requirements were evaluated based on four economic indicators: net cash farm income (NCFI), ending cash reserves (EC), net present value (NPV), and internal rate of return (IRR). Lastly, those that passed the economic feasibility test were ranked based on risk criteria certainty equivalent (CE) and risk premium (RP). The analyses found N fertilizer rates of 0, 20, and 100 kg N ha<sup>−1</sup> were generally economically not feasible. Additionally, medium (early-July to late-August) and late (late-July to mid-September) planting dates generally performed better than early (early-June to late-July) planting dates, while plant densities of 3.3 and 6.6 pL m<sup>−2</sup> performed better than 1.1. The robust resilience approach introduced in this study is easily transferable to other regions.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"13 1","pages":""},"PeriodicalIF":5.0,"publicationDate":"2024-01-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.523","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139550533","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The application of biochar improves the nutrient supply efficiency of organic fertilizer, sustains soil quality and promotes sustainable crop production 施用生物炭能提高有机肥的养分供应效率,保持土壤质量,促进作物的可持续生产
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-01-16 DOI: 10.1002/fes3.520
Kangkang Zhang, Zaid Khan, Mohammad Nauman Khan, Tao Luo, Lijun Luo, Junguo Bi, Liyong Hu

Rapeseed meal, a nutritious organic fertilizer (OF), contributes to improving soil environment and crop productivity. However, there are also problems, namely slow fertilizer efficiency and low nutrient utilization during the growing season. This 2-year field trial was conducted to explore the effect of biochar addition on improving the nutrient availability of OF through a comparative study of various biochar application rates under rice-rapeseed rotation conditions. The findings revealed that, compared to the individual application of chemical fertilizers (CF), OF alone decreased rice yield (2%/2%) and rapeseed yield (6%/10%) in 2019/2020. Compared with OF, combining biochar (15 t ha−1) with OF (OF + B15) significantly increased rice yield (17%/10%) and rapeseed yield (25%/20%) in the first/second year. Additionally, OF + B15 still increased rice yield (14%/7%) and rapeseed yield (12%/13%) for two consecutive years compared to CF. The co-application of biochar and OF had positive impacts on soil physicochemical properties and enzymes. Compared to OF, OF + B15 elevated soil organic carbon (SOC) by 57%–81%, soil catalase 19%, invertase 14%–20%, urease 17%–19%, and phosphatase 13%–17% during rice season, and similarly increased SOC by 77%–90%, soil catalase 14%–16%, invertase 14%–20%, urease 18%–24%, and phosphatase 16%–17% in rapeseed season. Biochar addition improved soil conditions and enzymatic activities, and the available nutrient supply of OF. Also, the co-application of biochar and rapeseed meal surpassed the effect of chemical fertilizer alone on the growth and yield of crops. Therefore, biochar coupling with organic fertilizer is an effective fertilization strategy based on resource recycling, which promotes both crop yield and sustainable agriculture.

菜籽粕是一种营养丰富的有机肥料(OF),有助于改善土壤环境和提高作物产量。但同时也存在一些问题,即肥效慢、生长季节养分利用率低。本田间试验为期两年,通过对水稻-油菜籽轮作条件下各种生物炭施用量的比较研究,探讨了添加生物炭对提高有机肥养分利用率的影响。研究结果表明,与单独施用化肥(CF)相比,2019/2020 年单独施用 OF 会降低水稻产量(2%/2%)和油菜籽产量(6%/10%)。与单独施用化肥相比,将生物炭(15 吨/公顷-1)与单独施用化肥相结合(OF + B15)可显著提高第一年/第二年的水稻产量(17%/10%)和油菜籽产量(25%/20%)。此外,与 CF 相比,OF + B15 仍可连续两年提高水稻产量(14%/7%)和油菜籽产量(12%/13%)。生物炭和 OF 的共同施用对土壤理化性质和酶产生了积极影响。与 OF 相比,OF + B15 在水稻季提高了土壤有机碳(SOC)57%-81%、土壤过氧化氢酶 19%、转化酶 14%-20%、脲酶 17%-19%、磷酸酶 13%-17%;在油菜季同样提高了土壤有机碳 77%-90%、土壤过氧化氢酶 14%-16%、转化酶 14%-20%、脲酶 18%-24%、磷酸酶 16%-17%。添加生物炭改善了土壤条件和酶活性,增加了 OF 的养分供应。同时,生物炭和菜籽粕的共同施用对作物生长和产量的影响超过了单独施用化肥。因此,生物炭与有机肥耦合是一种基于资源循环利用的有效施肥策略,既能提高作物产量,又能促进农业可持续发展。
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引用次数: 0
Biomass-based lateral root morphological parameter models for rapeseed (Brassica napus L.) 基于生物量的油菜(Brassica napus L.)侧根形态参数模型
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2023-12-30 DOI: 10.1002/fes3.519
Wei-xin Zhang, Qian Wu, Chuan-liang Sun, Dao-kuo Ge, Jing Cao, Wan-jie Liang, Ying-jun Yin, Hong Li, Hong-xin Cao, Wen-yu Zhang, Bai-ming Li, Yu-kai Xin

Lateral roots, including adventitious roots, are the main component of rapeseed roots with support, absorb, and synthesis functions and their morphological parameters directly affecting the plant's aboveground growth and yield. Root biomass, as a material base for lateral root growth, can be used as a link between plant phenotypes and their physiological processes, as well as to enhance root 3D growth model mechanisms and accuracy. To quantify the relationships between lateral root morphological indices and the corresponding organ biomass for rapeseed, we used two cultivars, NY 22 (conventional) and NZ 1818 (hybrid), and conducted cultivar and fertilizing cylindrical tube experiments during the 2016–2019, with two fertilizer levels, no fertilizer, and 180 kg N ha−1 fertilizer. The lateral root biomass and morphological parameters were determined during the whole growth period. The biomass-based lateral root morphological parameter models were developed by analyzing the quantitative relationship between the lateral root morphological indices and their corresponding biomass, and the descriptive models were verified with independent experimental data. The results showed that the correlation (r) of simulated and observed values for the lateral root morphological parameters are all greater than 0.9 with significant levels at p < 0.001. The absolute values of the average absolute difference (da) of simulated and observed values for the lateral root length (LLR), lateral root average diameter (ADLR), lateral root surface area (SALR), and lateral root volume (VLR) are −30.408 cm, −0.003 mm, 12.902 cm2, and 0.039 cm3, respectively. The RMSE values are 175.183 cm, 0.010 mm, 59.710 cm2, and 1.513 cm3, respectively. The ratio of da to the average observed values (dap) for the LLR and VLR are all less than 5%, and the ADLR and SALR are all <6%. The models developed in this paper have good performance and reliability for predicting lateral root morphological parameters of rapeseed. The study provides a mechanistic method for linking the rapeseed growth model with the morphological model using corresponding organic biomass and laying a good foundation for establishing a 3D morphological model for rapeseed root system based on biomass.

侧根(包括不定根)是油菜根系的主要组成部分,具有支撑、吸收和合成功能,其形态参数直接影响植株的地上部生长和产量。根系生物量作为侧根生长的物质基础,可作为植物表型与其生理过程之间的联系,也可用于增强根系三维生长模型的机制和准确性。为了量化油菜侧根形态指标与相应器官生物量之间的关系,我们选用 NY 22(常规)和 NZ 1818(杂交)两个栽培品种,在 2016-2019 年期间进行了栽培品种和施肥圆筒管试验,施肥水平有两种,分别为不施肥和 180 kg N ha-1 肥料。测定了整个生长期的侧根生物量和形态参数。通过分析侧根形态指标与其相应生物量之间的定量关系,建立了基于生物量的侧根形态参数模型,并用独立的实验数据对描述性模型进行了验证。结果表明,侧根形态参数的模拟值与观测值的相关性(r)均大于 0.9,显著水平为 p <0.001。侧根长度(LLR)、侧根平均直径(ADLR)、侧根表面积(SALR)和侧根体积(VLR)的模拟值与观测值的平均绝对差值(da)分别为-30.408 cm、-0.003 mm、12.902 cm2 和 0.039 cm3。RMSE 值分别为 175.183 厘米、0.010 毫米、59.710 平方厘米和 1.513 立方厘米。LLR 和 VLR 的 da 与平均观测值之比(dap)均小于 5%,ADLR 和 SALR 均为 <6%。本文建立的模型在预测油菜侧根形态参数方面具有良好的性能和可靠性。该研究提供了利用相应有机生物量将油菜生长模型与形态模型联系起来的机理方法,为建立基于生物量的油菜根系三维形态模型奠定了良好的基础。
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引用次数: 0
Population structure, runs of homozygosity analysis and construction of single nucleotide polymorphism fingerprinting database of Longnan goat population 陇南山羊种群结构、同源性分析和单核苷酸多态性指纹数据库的构建
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2023-12-08 DOI: 10.1002/fes3.517
Keyan Ma, Dengpan Li, Xingcai Qi, Qiao Li, Yi Wu, Juanjuan Song, Yue Zhang, Hai Yang, Taotao Li, Youji Ma

The Longnan goat (LN) is a local breed discovered during the third census of China's livestock and poultry genetic resources. In order to thoroughly comprehend the population traits, this research examined a total of 70 animals from three different goat populations, namely the LN goat, Nanjiang Brown goat (NJ), and Boer goat (Boer). Specific-Locus Amplified Fragment Sequencing was employed to analyze genetic diversity, population structure, and selective sweep patterns. Additionally, individual DNA fingerprints were generated to provide detailed genetic profiles for each subject. A total of 643,868 single nucleotide polymorphisms (SNPs) were detected, with a majority located in intergenic and intronic regions. Genetic diversity analysis uncovered lower diversity within the LN population compared to the other two populations. The analysis of population structure unveiled significant genetic distance between LN and both NJ and Boer populations, with distinct clustering patterns observed. Moreover, genetic differentiation coefficients (FST) of 0.1019 and 0.0854 were determined between LN and Boer, as well as LN and NJ, respectively, indicating substantial genetic differentiation. Selective sweep analysis, combining FST and π ratio, identified several genes associated with growth and development, reproduction, hair color, and immunity that may serve as valuable candidates for marker-assisted breeding. Furthermore, identification of 47,541 runs of homozygosity (ROHs) revealed non-uniform distribution across chromosomes, with the highest frequency on chromosome 1 and the lowest on chromosome 27. Correlations between different inbreeding coefficients varied, with the highest observed between FHOM and FGRM, and the lowest between FROH >1.5Mb and FROH <500kb. A total of 46 candidate genes were annotated within high-frequency ROH islands, primarily associated with biological processes such as reproduction, growth and development, and immunity. Finally, a DNA fingerprint, consisting of 371 highly polymorphic SNPs, was generated and presented in the form of a two-dimensional code for convenient access. Based on the population structure analysis, LN goats have been found to have a distant genetic distance and a higher degree of differentiation from both the Boer and NJ populations. Evaluation of genetic diversity parameters and ROH analysis indicates that the LN population exhibits lower genetic diversity and shows signs of inbreeding. Our findings offer theoretical support for the identification of genetic resources within this population.

陇南山羊(LN)是第三次中国畜禽遗传资源普查中发现的地方品种。为了深入了解种群特征,本研究对LN山羊、南江褐山羊(NJ)和波尔山羊(Boer) 3个不同山羊种群共70只动物进行了研究。特异位点扩增片段测序用于分析遗传多样性、群体结构和选择性扫描模式。此外,还生成了个体DNA指纹,以提供每个受试者的详细基因图谱。共检测到643,868个单核苷酸多态性(snp),其中大部分位于基因间区和内含子区。遗传多样性分析表明,与其他两个群体相比,LN群体的多样性较低。群体结构分析表明,LN与NJ、Boer群体遗传距离显著,聚类模式明显。LN与Boer、LN与NJ的遗传分化系数(FST)分别为0.1019和0.0854,表明LN与NJ之间存在较大的遗传分化。选择性扫描分析,结合FST和π比,确定了几个与生长发育、繁殖、毛发颜色和免疫相关的基因,可能作为标记辅助育种的有价值的候选基因。此外,47,541对纯合性(ROHs)的鉴定显示染色体间的分布不均匀,1号染色体上的频率最高,27号染色体上的频率最低。不同近交系数之间的相关性存在差异,FHOM和FGRM之间的相关性最高,FROH >1.5Mb和FROH <500kb之间的相关性最低。在高频ROH岛中总共注释了46个候选基因,主要与生殖、生长发育和免疫等生物过程相关。最后,生成了一个由371个高度多态性snp组成的DNA指纹,并以二维代码的形式呈现,以方便访问。通过种群结构分析,发现LN山羊与Boer和NJ种群的遗传距离较远,分化程度较高。遗传多样性参数评价和ROH分析表明,LN群体遗传多样性较低,有近交的迹象。我们的研究结果为该种群的遗传资源鉴定提供了理论支持。
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引用次数: 0
Featured Cover 特色介绍
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2023-11-27 DOI: 10.1002/fes3.516
Shanice Van Haeften, Caitlin Dudley, Yichen Kang, Daniel Smith, Ramakrishnan M. Nair, Colin A. Douglas, Andries Potgieter, Hannah Robinson, Lee T. Hickey, Millicent R. Smith

The cover image is based on the Review Article Building a better Mungbean: Breeding for reproductive resilience in a changing climate by Shanice Van Haeften et al., https://doi.org/10.1002/fes3.467. Image Credit: Megan Pope

封面图片基于评论文章《构建更好的绿豆:气候变化中的生殖弹性育种》,作者:Shanice Van Haeften等人,https://doi.org/10.1002/fes3.467。图片来源:Megan Pope
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引用次数: 0
Environmental stress in crops: Effects and responses during reproduction 作物的环境胁迫:繁殖过程中的影响和反应
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2023-11-27 DOI: 10.1002/fes3.515
Showkat Ahmad Ganie, Christine H. Foyer
<p>Environmental stresses experienced during reproductive development cause drastic yield reductions in crop plants. Much of the literature has, however, focused on the stress responses of plant vegetative tissues. Although stresses experienced during the vegetative stage of plant development can affect crop yields, the reproductive stage is the most stress-sensitive phase of the crop growth cycle, which directly determines crop productivity. In particular, the efficient operation of photosynthesis and assimilate partitioning during the early reproductive stages plays a crucial role in dry matter accumulation and reproductive organ formation. Several morpho-physiological traits that improve plant vegetative growth have been used to enhance crop stress tolerance. However, vegetative traits do not necessarily improve stress tolerance at the reproductive stage, nor do they ensure higher grain yields during the terminal stage of plant growth under stress conditions. In addition, there is a poor correlation between stress tolerance at the seedling/vegetative stage and that observed at the reproductive stage, suggesting that separate sets of genes are involved in the stress tolerance during reproduction.</p><p>The identification of the reproductive stage-specific target traits and dissection of physiological and molecular responses of crop reproductive tissues to environmental stresses (either applied individually or in combination) are critical steps towards improving the grain yield under unfavorable environmental conditions. This information is essential for the development of stress-tolerant crop cultivars and global food security. Additionally, exploiting the natural molecular genetic variations in crop species for reproductive stage stress tolerance is of paramount importance for assisting plant breeders in their efforts to identify stress tolerant and high-yielding cultivars.</p><p>This Special Issue encompasses reviews and research articles that contribute towards and further our current understanding of plant reproductive stage stress tolerance. The comprehensive review articles contained in this Special Issue offer a synthesis of current knowledge, together with critical analysis of the current literature. They provide novel and wide-ranging insights into the topic. The research articles provide new information concerning the genetic and physiological mechanisms underlying plant reproductive fitness and productivity under various environmental conditions.</p><p>The review by Jeger (<span>2023</span>) provides a comprehensive and unifying description of term ‘tolerance’, which is defined as the ability of the host plant to mitigate the effects of infection on reproductive and survival fitness. This tolerance is robust, regardless of the pathogen load. This compelling review highlights the need for more intensive studies of disease tolerance at the reproductive stage. Jeger (<span>2023</span>) argues that it is important to define the interacti
在生殖发育过程中所经历的环境胁迫导致作物产量急剧下降。然而,大部分文献都集中在植物营养组织的应激反应上。虽然在植物发育的营养阶段所经历的胁迫会影响作物的产量,但生殖阶段是作物生长周期中对胁迫最敏感的阶段,直接决定了作物的产量。特别是在生殖早期,光合作用和同化物质的有效分配对干物质积累和生殖器官的形成起着至关重要的作用。一些促进植物营养生长的形态生理性状已被用于提高作物的抗逆性。然而,营养性状并不一定能提高生殖阶段的抗逆性,也不能保证逆境条件下植物生长末期的高产。此外,幼苗/营养期的抗逆性与生殖期的抗逆性之间的相关性较差,这表明生殖期的抗逆性是由不同的基因组成的。鉴定生殖阶段特异性目标性状和分析作物生殖组织对环境胁迫(单独或联合)的生理和分子反应是在不利环境条件下提高粮食产量的关键步骤。这一信息对于开发耐胁迫作物品种和全球粮食安全至关重要。此外,利用作物物种的自然分子遗传变异进行生殖期抗逆性研究,对于帮助植物育种家鉴定抗逆性和高产品种具有重要意义。这期特刊包含了对植物生殖期抗逆性的当前理解做出贡献的综述和研究文章。本特刊中包含的综合评论文章提供了当前知识的综合,以及对当前文献的批判性分析。他们为这个主题提供了新颖而广泛的见解。这些研究成果为揭示不同环境条件下植物生殖适应性和生产力的遗传生理机制提供了新的信息。Jeger(2023)的综述对“耐受性”一词进行了全面而统一的描述,其定义为寄主植物减轻感染对生殖和生存适应性影响的能力。无论病原体负荷如何,这种耐受性都很强。这一令人信服的综述强调需要对生殖阶段的疾病耐受性进行更深入的研究。Jeger(2023)认为,更清楚地定义生物和非生物胁迫的相互作用和宿主反应是很重要的。同样,本文也考虑了病毒感染是否可以降低不同非生物胁迫的严重程度,并提供了非生物胁迫耐受性在降低植物对病原体易感性中的作用。最后,Jeger(2023)强调需要对耐受性进行更多的实地研究,并使用数学模型来制定疾病管理策略。Van Haeften et al.,(2023)的综述文章从生理学角度对各种非生物胁迫对绿豆生殖生长和生产力的影响进行了专家评估。Van Haeften等人(2023)考虑了赋予适应性和生殖适应性的性状,强调需要更多地应用新的生物技术工具,这将加速未来气候智能型绿豆作物的发展。此外,Van Haeften等人(2023)认为,可用基因型数量的限制,以及缺乏实地研究和详细的实验信息,构成了实现绿豆生殖弹性的主要障碍。热胁迫通过损害花粉发育和种子结实率对许多作物的生殖发育产生不利影响。Smith等人(2023)提供了大量关于热胁迫对高粱(sorghum bicolor (L.))花药发育早期和后期的有害影响的新数据。Moench),导致粮食产量下降。本研究报道的花粉活力分析表明,孕穗期比花粉母细胞发育阶段更容易受到热胁迫持续时间的影响。这些发现暗示了生长素在生殖期两个阶段对根茎分蘖形成的热诱导作用。这些影响可能保护遭受热胁迫的作物的粮食产量。遗传多样性是全球粮食安全的支柱。 它提供了一种植物物种能够适应各种环境压力的可能性。Shokat等人(2023)的综述全面概述了在广泛的面包小麦(Triticum aestivum L.)基因型群体中发现的遗传变异和育种前性状的潜力,以提高花期干旱和热胁迫的耐受性。他们探索了与生态生理学、抗氧化和碳水化合物代谢、渗透保护和内源植物激素水平相关的一系列生理参数的潜力,以及新基因,以预测经历干旱和热胁迫的植物的生殖阶段特定产量相关性状。Shokat等人(2023)提出,可以有效利用多种小麦遗传资源的可用性,以及已确定的育种前性状,培育对不利环境条件具有高抗逆性的小麦品种。除了遗传资源外,基因组资源对作物改良也至关重要。基因组技术的进步使新的基因组资源得以产生,这些资源可用于作物改良计划,以确保未来的全球粮食安全。Pruthi等(2023)已经确定了水稻开花期耐盐性相关的几个数量性状位点(qtl)和候选基因。这些基因与水稻幼苗期耐盐基因不同,这表明水稻在这些发育阶段具有不同的遗传控制途径。这一发现需要不同qtl /基因的叠加,以进一步提高两个发育阶段的耐盐性。值得注意的是,Pruthi等人(2023)也发现了一些在苗期和开花期都具有更高耐盐性的渗入系。应用最先进的方法,如全基因组测序、转录组学和代谢组学,将有助于更深入地了解这些水稻品系在这两个阶段的耐盐机制。总而言之,包括本期特刊的综述和研究文章提供了有关环境胁迫对作物生殖适宜性影响的新的有用信息。他们提供了丰富的有价值的专家见解,生殖阶段特定的目标性状,生理和分子反应的压力,以及基因组资源,自然遗传变异的作物物种及其野生近缘。这些信息对于通过标记辅助选择、高通量表型、基因组编辑和基因组选择等技术加速作物遗传改良的植物育种策略具有宝贵的价值。本期特刊提供了丰富的有用信息,这些信息将有助于开发在繁殖阶段更能抵御压力的作物品种,从而保障作物产量。没有资助者。作者明确表示,本文不存在任何利益冲突。
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引用次数: 0
The effects of heat stress on male reproduction and tillering in Sorghum bicolor 热胁迫对双色高粱雄性繁殖和分蘖的影响
IF 5 2区 农林科学 Q2 FOOD SCIENCE & TECHNOLOGY Pub Date : 2023-11-16 DOI: 10.1002/fes3.510
Ashley Smith, Benjamin R. Gentile, Zhanguo Xin, Dazhong Zhao

Due to global climate change, heat stress is increasingly harming the growth, development, overall biomass, and grain yield of numerous crops. Heat stress impairs pollen development and thus reduces seed set in Sorghum bicolor (L.) Moench; however, the effects of heat stress on anther development at specific stages and tiller formation remain incompletely understood. Here we report that exposure to heat stress [42°C/32°C (day/night)] at pollen mother cell (PMC) and booting stages profoundly disrupts tapetum and pollen development, resulting in a significant decrease in grain yield in sorghum. Sorghum plants subjected to 9 days or less of heat stress at the PMC stage exhibited normal pollen viability, but 12 days of heat stress caused almost complete loss of grain yield and the formation of nonviable pollen grains. Similarly, sorghum plants that were heat-stressed for 3 days at the booting stage produced few seeds. Further analysis revealed that aberrant tapetum and pollen development contributed to the sterility of pollen in these heat-stressed plants. Notably, in addition to inhibiting plant height, a 12-day heat stress at the PMC stage promoted the formation of basal tillers, whereas a 3-day heat stress at the booting stage stimulated the formation of apical tillers, which helped salvage seed yield under heat stress conditions. Moreover, the application of exogenous auxin promoted the formation of apical tillers and leaf numbers per apical tiller. Collectively, our findings suggest that sorghum is susceptible to heat stress during both early and late anther development, and auxin might be involved in governing the formation of apical tillers.

由于全球气候变化,热胁迫对许多作物的生长发育、总体生物量和粮食产量的危害越来越大。热胁迫损害了高粱花粉发育,从而降低了双色高粱的结实率。Moench;然而,热胁迫对特定阶段花药发育和分蘖形成的影响尚不完全清楚。在花粉母细胞(PMC)和孕穗期暴露于42°C/32°C(昼/夜)的热胁迫下,会严重破坏绒毡层和花粉的发育,导致高粱籽粒产量显著下降。在PMC期经受9天或更短时间热胁迫的高粱植株花粉活力正常,但12天的热胁迫几乎使籽粒产量完全丧失,形成无活力的花粉粒。同样,高粱植株在孕穗期被热胁迫3天,产生的种子很少。进一步分析表明,异常绒毡层和花粉发育导致了这些热胁迫植物花粉的不育性。值得注意的是,除抑制株高外,在孕穗期12天的热胁迫促进了基分蘖的形成,而在孕穗期3天的热胁迫促进了顶分蘖的形成,这有助于在热胁迫条件下挽救种子产量。此外,外源生长素的施用促进了根尖分蘖的形成和每个根尖分蘖的叶数。总的来说,我们的研究结果表明,高粱在花药发育的早期和后期都容易受到热胁迫,生长素可能参与控制顶分蘖的形成。
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引用次数: 2
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Food and Energy Security
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