Muhammad Zeeshan Mola Bakhsh, Ahmad Ali, Xiaoyu Zhang, Jing Zhang, Meirong Zhong, Bin Yi
Hybrid fixation is an emerging breeding tool that eliminates the need to purchase costly hybrid seeds on an annual basis. However, this technique is limited to Arabidopsis, rice, and soybean with a severe issue of seed setting. Seed setting rate is affected due to targeting of cell division-related genes and an increase in ploidy in each successive generation. These types of issues can be sorted out by identifying self-haploid indication lines. Egg cell-specific endopeptidases (ECS) play a role during gamete fusion/fertilization by avoiding polytuby and along with gamete fusion work as a haploid inducer in many crops. Here, we knock out BnECS1, BnECS2, and both together in Brassica napus (B. napus) by using the clustered regularly interspaced short palindromic repeats (CRISPR-Cas9) gene editing system. Mutant population causes maternal/self-haploid induction in B. napus. Self-haploid induction will play a significant role in hybrid fixation, allowing hybrid plants to maintain their ploidy level without requiring additional hybridization with other haploid induction lines. Hence, our study provides a baseline for the development of hybrid fix plants in B. napus without an increase of ploidy in each successive generation.
{"title":"Maternal Haploid Induction Through Egg Cell-Specific Endopeptidases in Brassica napus: A Step Forward Towards Hybrid Fixation","authors":"Muhammad Zeeshan Mola Bakhsh, Ahmad Ali, Xiaoyu Zhang, Jing Zhang, Meirong Zhong, Bin Yi","doi":"10.1002/fes3.70182","DOIUrl":"10.1002/fes3.70182","url":null,"abstract":"<p>Hybrid fixation is an emerging breeding tool that eliminates the need to purchase costly hybrid seeds on an annual basis. However, this technique is limited to Arabidopsis, rice, and soybean with a severe issue of seed setting. Seed setting rate is affected due to targeting of cell division-related genes and an increase in ploidy in each successive generation. These types of issues can be sorted out by identifying self-haploid indication lines. Egg cell-specific endopeptidases (<i>ECS</i>) play a role during gamete fusion/fertilization by avoiding polytuby and along with gamete fusion work as a haploid inducer in many crops. Here, we knock out Bn<i>ECS1</i>, <i>BnECS2</i>, and both together in <i>Brassica napus</i> (<i>B. napus</i>) by using the clustered regularly interspaced short palindromic repeats (CRISPR-Cas9) gene editing system. Mutant population causes maternal/self-haploid induction in <i>B. napus</i>. Self-haploid induction will play a significant role in hybrid fixation, allowing hybrid plants to maintain their ploidy level without requiring additional hybridization with other haploid induction lines. Hence, our study provides a baseline for the development of hybrid fix plants in <i>B. napus</i> without an increase of ploidy in each successive generation.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70182","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145969667","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Plants are often attacked by multiple herbivores. Most studies on plant–herbivore interactions focus on pairwise comparisons, examining one or two herbivores attacking a single species, or a single herbivore attacking multiple species. Although sequential herbivory is prevalent, there has been limited investigation on plant and herbivore response to sequential attacks, especially in soybean (Glycine max, L.). To examine this, we imposed sequential and intermittent herbivory with two herbivores—fall armyworm, Spodoptera frugiperda (FAW), and soybean looper, Chrysodeixis includens (SL)—on two soybean varieties, “Magellan” and “Black Hawk”. A comprehensive evaluation of plant growth, physiology, and fitness traits, alongside herbivore growth and development, was conducted. No significant effects of the sequential attacks were observed on soybean growth traits. However, after the first attack, physiological traits were upregulated but remained unchanged post sequential herbivory. FAW exhibited higher mass gain compared to SL during the first herbivory. In sequential attacks, FAW that fed on SL-primed plants gained more mass, whereas both herbivores that fed on FAW-primed plants gained the least. The frass weight and the number of frass pellets collected from FAW were also higher in both the first and sequential attacks compared to SL. However, yield and fitness were unaffected by sequential herbivory by either FAW or SL. Taken together, these findings suggest that FAW, although a minor but polyphagous pest, was able to feed more and induce higher defenses compared to SL, a major pest of the crop with limited host range. More importantly, we show that sequential and intermittent herbivory has differential effects on host and herbivore traits, but not on yield, suggesting tolerance—an area that should be explored further.
{"title":"Intermittent Sequential Herbivory Affects Herbivore Growth Traits but Not Plant Fitness in Soybean","authors":"Insha Shafi, Manish Gautam, Rupesh Kariyat","doi":"10.1002/fes3.70188","DOIUrl":"https://doi.org/10.1002/fes3.70188","url":null,"abstract":"<p>Plants are often attacked by multiple herbivores. Most studies on plant–herbivore interactions focus on pairwise comparisons, examining one or two herbivores attacking a single species, or a single herbivore attacking multiple species. Although sequential herbivory is prevalent, there has been limited investigation on plant and herbivore response to sequential attacks, especially in soybean (<i>Glycine max</i>, L.). To examine this, we imposed sequential and intermittent herbivory with two herbivores—fall armyworm, <i>Spodoptera frugiperda</i> (FAW), and soybean looper, <i>Chrysodeixis includens</i> (SL)—on two soybean varieties, “Magellan” and “Black Hawk”. A comprehensive evaluation of plant growth, physiology, and fitness traits, alongside herbivore growth and development, was conducted. No significant effects of the sequential attacks were observed on soybean growth traits. However, after the first attack, physiological traits were upregulated but remained unchanged post sequential herbivory. FAW exhibited higher mass gain compared to SL during the first herbivory. In sequential attacks, FAW that fed on SL-primed plants gained more mass, whereas both herbivores that fed on FAW-primed plants gained the least. The frass weight and the number of frass pellets collected from FAW were also higher in both the first and sequential attacks compared to SL. However, yield and fitness were unaffected by sequential herbivory by either FAW or SL. Taken together, these findings suggest that FAW, although a minor but polyphagous pest, was able to feed more and induce higher defenses compared to SL, a major pest of the crop with limited host range. More importantly, we show that sequential and intermittent herbivory has differential effects on host and herbivore traits, but not on yield, suggesting tolerance—an area that should be explored further.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70188","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145986781","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rice blast is the most significant disease affecting rice production, causing substantial yield loss and quality degradation. Previous studies have focused primarily on the genetic basis of pathogen resistance in rice. Recent studies have revealed the immune response mechanisms induced by pathogen-associated molecular patterns in the pathogen-host system, as well as the immune responses induced by effector proteins of the pathogen. This review summarizes recent advancements in the mechanisms by which rice blast effectors alter host cell structures or functions and interfere with rice immunity, and the molecular mechanisms through which rice blast resistance genes regulate rice resistance. This article explores the urgent problems that need to be solved in the field of molecular breeding research on rice resistance to rice blast and proposes a research concept for systematically mining the rice antagonistic genes corresponding to the virulence genes of the rice blast fungus, constructing new rice varieties with precise disease resistance, and thereby effectively reducing the harmful effects of rice blast on rice production.
{"title":"Rice Blast Pathogenesis and Resistance: Effector Strategies and Host Defense Mechanisms","authors":"Lu Gan, Qihang Gui, Meimei Yang, Qian Xiang, Bing Yang, Panpan Yuan, Hongyu Chen, Shan He, Minjie Li, Zhengwu Zhao","doi":"10.1002/fes3.70190","DOIUrl":"10.1002/fes3.70190","url":null,"abstract":"<p>Rice blast is the most significant disease affecting rice production, causing substantial yield loss and quality degradation. Previous studies have focused primarily on the genetic basis of pathogen resistance in rice. Recent studies have revealed the immune response mechanisms induced by pathogen-associated molecular patterns in the pathogen-host system, as well as the immune responses induced by effector proteins of the pathogen. This review summarizes recent advancements in the mechanisms by which rice blast effectors alter host cell structures or functions and interfere with rice immunity, and the molecular mechanisms through which rice blast resistance genes regulate rice resistance. This article explores the urgent problems that need to be solved in the field of molecular breeding research on rice resistance to rice blast and proposes a research concept for systematically mining the rice antagonistic genes corresponding to the virulence genes of the rice blast fungus, constructing new rice varieties with precise disease resistance, and thereby effectively reducing the harmful effects of rice blast on rice production.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70190","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145963965","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shilong Xi, Xiaohui Wang, Ziyi Qiu, Yang Luo, Kejun Lin
The acceleration of urbanization and its resultant expansion of urban sprawl (US) have significantly reshaped agricultural supply chain resilience (ASCR). In this study, we focused on the effects of US and the induction of imbalances in resource allocation. To accomplish this goal, we analyzed the data using a Geographically Weighted Random Forest (GWRF) with SHAP values, a moderated effects model, and Bayesian Kernel Machine Regression (BKMR). These analyses enabled us to evaluate how US undermines ASCR via resource misallocation (RM), with an emphasis on the nonlinear dynamics and spatial heterogeneity of RM. Our results indicate that an apparent nonlinear threshold effect exists between US and ASCR. When US remains below a critical threshold value of 0.33, moderate expansion enhances supply chain resilience. However, once this limit is surpassed, the negative impact of US intensifies exponentially. In addition, we found evidence of spatial disparities, with eastern coastal regions exhibiting more pronounced vulnerabilities, while specific megacity clusters displayed a positive response. RM functions as an amplifier, under conditions where capital distortion (CD) and land distortion (LAD) substantially magnify the marginal adverse effects of US at lower levels. In contrast, labor distortion (LD) demonstrates relatively stable effects, though these effects were spatially differentiated. Collectively, these distortions operate through a cyclical mechanism of “market inefficiency—spatial crowding—labor mismatch,” the net effect of which systematically erodes resilience. Compared with previous studies that mainly focus on linear mean effects or single-factor misallocations, in this study we employed a combined GWRF–SHAP and BKMR framework to systematically reveal the threshold-dependent spatially heterogeneous effects of US and the nonlinear amplification mechanisms of multidimensional RM. With this approach, quantifiable evidence for enhancing agricultural supply chain resilience management in developing countries can be achieved. Accordingly, policy recommendations are proposed to underscore the urgency of establishing urban growth boundary controls and corrective mechanisms for land misallocation to sever the amplification loop of this process.
{"title":"Urban Sprawl Undermines Agricultural Supply Chain Resilience: Amplifying Role of Resource Misallocation and Its Threshold Effects","authors":"Shilong Xi, Xiaohui Wang, Ziyi Qiu, Yang Luo, Kejun Lin","doi":"10.1002/fes3.70184","DOIUrl":"10.1002/fes3.70184","url":null,"abstract":"<p>The acceleration of urbanization and its resultant expansion of urban sprawl (US) have significantly reshaped agricultural supply chain resilience (ASCR). In this study, we focused on the effects of US and the induction of imbalances in resource allocation. To accomplish this goal, we analyzed the data using a Geographically Weighted Random Forest (GWRF) with SHAP values, a moderated effects model, and Bayesian Kernel Machine Regression (BKMR). These analyses enabled us to evaluate how US undermines ASCR via resource misallocation (RM), with an emphasis on the nonlinear dynamics and spatial heterogeneity of RM. Our results indicate that an apparent nonlinear threshold effect exists between US and ASCR. When US remains below a critical threshold value of 0.33, moderate expansion enhances supply chain resilience. However, once this limit is surpassed, the negative impact of US intensifies exponentially. In addition, we found evidence of spatial disparities, with eastern coastal regions exhibiting more pronounced vulnerabilities, while specific megacity clusters displayed a positive response. RM functions as an amplifier, under conditions where capital distortion (CD) and land distortion (LAD) substantially magnify the marginal adverse effects of US at lower levels. In contrast, labor distortion (LD) demonstrates relatively stable effects, though these effects were spatially differentiated. Collectively, these distortions operate through a cyclical mechanism of “market inefficiency<b>—</b>spatial crowding<b>—</b>labor mismatch,” the net effect of which systematically erodes resilience. Compared with previous studies that mainly focus on linear mean effects or single-factor misallocations, in this study we employed a combined GWRF–SHAP and BKMR framework to systematically reveal the threshold-dependent spatially heterogeneous effects of US and the nonlinear amplification mechanisms of multidimensional RM. With this approach, quantifiable evidence for enhancing agricultural supply chain resilience management in developing countries can be achieved. Accordingly, policy recommendations are proposed to underscore the urgency of establishing urban growth boundary controls and corrective mechanisms for land misallocation to sever the amplification loop of this process.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70184","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145904926","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maqbool Ahamd, Yun Wang, Zhechuan Liu, Rukhsar Shaheen, Junhui Liu, Wenqi Zhao, Muhammad Burhan Khan Tareen, Yang Li, Ameet Kumar, Fei Wang
This study aims to balance yield and quality by selecting varieties and optimizing agronomic management practices. In 2023, field trials evaluated 35 new rice varieties for yield and grain quality. In 2024, four varieties with varying yield and quality performance underwent a split-plot design for further investigation with two sowing dates (S1: 14th May and S2: 29th May) and two nitrogen (N) rates (N1: 120 and N2: 180 kg N ha−1). In 2023, the grain yield of these varieties ranged from 7.3 to 10.2 t ha−1, with chalkiness degree 3.7%–29.0%. The selected variety Cheng Liang You (CLY607) in 2024 reached a peak yield of 9.3 t ha−1 with early sowing on 14th May and 180 kg N ha−1. The increased yield was attributed to higher N uptake, improved grain filling percentage, increased biomass, and a higher harvest index. Delayed sowing resulted in lower daily radiation but maintained heat stress in a hot year of 2024, which reduced leaf area index (LAI) and biomass, lowered grain filling percentage and head rice rate, but increased chalkiness. Early sowing with a low N rate improved eating quality due to the reduced protein content and stabilized amylose levels, yet led to increased chalkiness. It also altered protein composition to more glutelin and less prolamin. On the contrary, a high N rate increased total protein content in grain but negatively affected rice taste quality. In conclusion, CLY607 showed high-temperature tolerance for yield and quality; delaying sowing did not relieve the detrimental impact of high temperatures on crop yield and quality in extreme heat years; a high N rate increased resilience to high temperature by boosting yield and reducing chalkiness, but lowered eating quality.
本研究旨在通过选择品种和优化农艺管理措施来平衡产量和质量。2023年,田间试验评估了35个水稻新品种的产量和籽粒品质。2024年,选取4个产量和品质表现各异的品种,采用2个播期(S1: 5月14日和S2: 5月29日)和2个施氮量(N1: 120和N2: 180 kg N ha - 1)的分畦设计进行进一步调查。2023年,这些品种的籽粒产量在7.3 ~ 10.2 t ha−1之间,垩白度为3.7% ~ 29.0%。所选品种成亮优(CLY607)在2024年5月14日提前播种,施氮量180 kg hm - 1,产量最高可达9.3 t hm - 1。提高产量的主要原因是氮素吸收增加、灌浆率提高、生物量增加和收获指数提高。2024年高温年,延迟播种降低了日辐射,但保持了热胁迫,导致叶面积指数和生物量下降,籽粒灌浆率和抽穗率降低,但白垩度增加。低施氮量的早播提高了籽粒的食性,降低了籽粒的蛋白质含量,稳定了籽粒的直链淀粉含量,但导致籽粒垩白度增加。它还改变了蛋白质组成,增加了谷蛋白,减少了蛋白。相反,高施氮量提高了籽粒总蛋白质含量,但对稻米口感品质有负面影响。综上所述,CLY607具有良好的耐高温产量和耐高温品质;在极端高温年份,推迟播种并不能缓解高温对作物产量和品质的不利影响;高施氮量通过提高产量和降低垩白度提高了对高温的抗逆性,但降低了食性。
{"title":"Interaction Between Sowing Date and Nitrogen Fertilization: Agronomic and Physiological Mechanisms Driving High Yield and Superior Grain Quality in Rice","authors":"Maqbool Ahamd, Yun Wang, Zhechuan Liu, Rukhsar Shaheen, Junhui Liu, Wenqi Zhao, Muhammad Burhan Khan Tareen, Yang Li, Ameet Kumar, Fei Wang","doi":"10.1002/fes3.70187","DOIUrl":"https://doi.org/10.1002/fes3.70187","url":null,"abstract":"<p>This study aims to balance yield and quality by selecting varieties and optimizing agronomic management practices. In 2023, field trials evaluated 35 new rice varieties for yield and grain quality. In 2024, four varieties with varying yield and quality performance underwent a split-plot design for further investigation with two sowing dates (S1: 14th May and S2: 29th May) and two nitrogen (N) rates (N1: 120 and N2: 180 kg N ha<sup>−1</sup>). In 2023, the grain yield of these varieties ranged from 7.3 to 10.2 t ha<sup>−1</sup>, with chalkiness degree 3.7%–29.0%. The selected variety Cheng Liang You (CLY607) in 2024 reached a peak yield of 9.3 t ha<sup>−1</sup> with early sowing on 14th May and 180 kg N ha<sup>−1</sup>. The increased yield was attributed to higher N uptake, improved grain filling percentage, increased biomass, and a higher harvest index. Delayed sowing resulted in lower daily radiation but maintained heat stress in a hot year of 2024, which reduced leaf area index (LAI) and biomass, lowered grain filling percentage and head rice rate, but increased chalkiness. Early sowing with a low N rate improved eating quality due to the reduced protein content and stabilized amylose levels, yet led to increased chalkiness. It also altered protein composition to more glutelin and less prolamin. On the contrary, a high N rate increased total protein content in grain but negatively affected rice taste quality. In conclusion, CLY607 showed high-temperature tolerance for yield and quality; delaying sowing did not relieve the detrimental impact of high temperatures on crop yield and quality in extreme heat years; a high N rate increased resilience to high temperature by boosting yield and reducing chalkiness, but lowered eating quality.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2025-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70187","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145905271","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Maqbool Ahamd, Yun Wang, Zhechuan Liu, Rukhsar Shaheen, Junhui Liu, Wenqi Zhao, Muhammad Burhan Khan Tareen, Yang Li, Ameet Kumar, Fei Wang
This study aims to balance yield and quality by selecting varieties and optimizing agronomic management practices. In 2023, field trials evaluated 35 new rice varieties for yield and grain quality. In 2024, four varieties with varying yield and quality performance underwent a split-plot design for further investigation with two sowing dates (S1: 14th May and S2: 29th May) and two nitrogen (N) rates (N1: 120 and N2: 180 kg N ha−1). In 2023, the grain yield of these varieties ranged from 7.3 to 10.2 t ha−1, with chalkiness degree 3.7%–29.0%. The selected variety Cheng Liang You (CLY607) in 2024 reached a peak yield of 9.3 t ha−1 with early sowing on 14th May and 180 kg N ha−1. The increased yield was attributed to higher N uptake, improved grain filling percentage, increased biomass, and a higher harvest index. Delayed sowing resulted in lower daily radiation but maintained heat stress in a hot year of 2024, which reduced leaf area index (LAI) and biomass, lowered grain filling percentage and head rice rate, but increased chalkiness. Early sowing with a low N rate improved eating quality due to the reduced protein content and stabilized amylose levels, yet led to increased chalkiness. It also altered protein composition to more glutelin and less prolamin. On the contrary, a high N rate increased total protein content in grain but negatively affected rice taste quality. In conclusion, CLY607 showed high-temperature tolerance for yield and quality; delaying sowing did not relieve the detrimental impact of high temperatures on crop yield and quality in extreme heat years; a high N rate increased resilience to high temperature by boosting yield and reducing chalkiness, but lowered eating quality.
本研究旨在通过选择品种和优化农艺管理措施来平衡产量和质量。2023年,田间试验评估了35个水稻新品种的产量和籽粒品质。2024年,选取4个产量和品质表现各异的品种,采用2个播期(S1: 5月14日和S2: 5月29日)和2个施氮量(N1: 120和N2: 180 kg N ha - 1)的分畦设计进行进一步调查。2023年,这些品种的籽粒产量在7.3 ~ 10.2 t ha−1之间,垩白度为3.7% ~ 29.0%。所选品种成亮优(CLY607)在2024年5月14日提前播种,施氮量180 kg hm - 1,产量最高可达9.3 t hm - 1。提高产量的主要原因是氮素吸收增加、灌浆率提高、生物量增加和收获指数提高。2024年高温年,延迟播种降低了日辐射,但保持了热胁迫,导致叶面积指数和生物量下降,籽粒灌浆率和抽穗率降低,但白垩度增加。低施氮量的早播提高了籽粒的食性,降低了籽粒的蛋白质含量,稳定了籽粒的直链淀粉含量,但导致籽粒垩白度增加。它还改变了蛋白质组成,增加了谷蛋白,减少了蛋白。相反,高施氮量提高了籽粒总蛋白质含量,但对稻米口感品质有负面影响。综上所述,CLY607具有良好的耐高温产量和耐高温品质;在极端高温年份,推迟播种并不能缓解高温对作物产量和品质的不利影响;高施氮量通过提高产量和降低垩白度提高了对高温的抗逆性,但降低了食性。
{"title":"Interaction Between Sowing Date and Nitrogen Fertilization: Agronomic and Physiological Mechanisms Driving High Yield and Superior Grain Quality in Rice","authors":"Maqbool Ahamd, Yun Wang, Zhechuan Liu, Rukhsar Shaheen, Junhui Liu, Wenqi Zhao, Muhammad Burhan Khan Tareen, Yang Li, Ameet Kumar, Fei Wang","doi":"10.1002/fes3.70187","DOIUrl":"https://doi.org/10.1002/fes3.70187","url":null,"abstract":"<p>This study aims to balance yield and quality by selecting varieties and optimizing agronomic management practices. In 2023, field trials evaluated 35 new rice varieties for yield and grain quality. In 2024, four varieties with varying yield and quality performance underwent a split-plot design for further investigation with two sowing dates (S1: 14th May and S2: 29th May) and two nitrogen (N) rates (N1: 120 and N2: 180 kg N ha<sup>−1</sup>). In 2023, the grain yield of these varieties ranged from 7.3 to 10.2 t ha<sup>−1</sup>, with chalkiness degree 3.7%–29.0%. The selected variety Cheng Liang You (CLY607) in 2024 reached a peak yield of 9.3 t ha<sup>−1</sup> with early sowing on 14th May and 180 kg N ha<sup>−1</sup>. The increased yield was attributed to higher N uptake, improved grain filling percentage, increased biomass, and a higher harvest index. Delayed sowing resulted in lower daily radiation but maintained heat stress in a hot year of 2024, which reduced leaf area index (LAI) and biomass, lowered grain filling percentage and head rice rate, but increased chalkiness. Early sowing with a low N rate improved eating quality due to the reduced protein content and stabilized amylose levels, yet led to increased chalkiness. It also altered protein composition to more glutelin and less prolamin. On the contrary, a high N rate increased total protein content in grain but negatively affected rice taste quality. In conclusion, CLY607 showed high-temperature tolerance for yield and quality; delaying sowing did not relieve the detrimental impact of high temperatures on crop yield and quality in extreme heat years; a high N rate increased resilience to high temperature by boosting yield and reducing chalkiness, but lowered eating quality.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2025-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70187","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145905270","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ahmed O. Warsame, Yahye A. Isse, Abdirizak Mohamed Sh. Abdi
Over the past three decades, Somalia has experienced recurrent civil conflic and prolonged droughts. These crises have displaced farming communities, weakened traditional seed systems and disrupted local crop diversity. Cowpea (Vigna unguiculata (L.) Walp) is Somalia's most important food crop after maize and sorghum, where it provides households with affordable protein and supports the sustainability of low-input farming systems. This study aimed to assess the current status of cowpea production, identify breeding priorities across three agroecological zones in southern Somalia, and establish a core germplasm collection for future breeding programs. Farmer surveys were conducted in Baidoa, Afgoie and Jowhar, involving interviews with 150 farmers using a semi-structured questionnaire. Over 60% of farmers cultivated cowpea for both household consumption and market sale. While cowpea was predominantly grown as an intercrop, nearly 45% of farmers in Afgoie produced it as a sole crop. Regional differences in varietal preferences were evident: more farmers in Afgoie preferred erect, uniformly maturing cultivars with dark-red seeds, while other regions showed more diverse preferences. Production constraints also varied by region, with drought being the primary limitation in Baidoa, and pests and diseases the major challenges in Afgoie and Jowhar. A germplasm collection representing Somalia's cowpea diversity from pre- and post-civil war periods was established, supplemented by global diversity and accessions with desirable agronomic traits. These genetic resources, together with farmer insights, provide a foundation for targeted breeding to improve cowpea productivity and support future food security in Somalia.
{"title":"Production Status, Breeding Priorities and Genetic Resources of Cowpea in Post-Civil War Somalia","authors":"Ahmed O. Warsame, Yahye A. Isse, Abdirizak Mohamed Sh. Abdi","doi":"10.1002/fes3.70181","DOIUrl":"https://doi.org/10.1002/fes3.70181","url":null,"abstract":"<p>Over the past three decades, Somalia has experienced recurrent civil conflic and prolonged droughts. These crises have displaced farming communities, weakened traditional seed systems and disrupted local crop diversity. Cowpea (<i>Vigna unguiculata</i> (L.) Walp) is Somalia's most important food crop after maize and sorghum, where it provides households with affordable protein and supports the sustainability of low-input farming systems. This study aimed to assess the current status of cowpea production, identify breeding priorities across three agroecological zones in southern Somalia, and establish a core germplasm collection for future breeding programs. Farmer surveys were conducted in Baidoa, Afgoie and Jowhar, involving interviews with 150 farmers using a semi-structured questionnaire. Over 60% of farmers cultivated cowpea for both household consumption and market sale. While cowpea was predominantly grown as an intercrop, nearly 45% of farmers in Afgoie produced it as a sole crop. Regional differences in varietal preferences were evident: more farmers in Afgoie preferred erect, uniformly maturing cultivars with dark-red seeds, while other regions showed more diverse preferences. Production constraints also varied by region, with drought being the primary limitation in Baidoa, and pests and diseases the major challenges in Afgoie and Jowhar. A germplasm collection representing Somalia's cowpea diversity from pre- and post-civil war periods was established, supplemented by global diversity and accessions with desirable agronomic traits. These genetic resources, together with farmer insights, provide a foundation for targeted breeding to improve cowpea productivity and support future food security in Somalia.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2025-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70181","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145887550","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ahmed O. Warsame, Yahye A. Isse, Abdirizak Mohamed Sh. Abdi
Over the past three decades, Somalia has experienced recurrent civil conflic and prolonged droughts. These crises have displaced farming communities, weakened traditional seed systems and disrupted local crop diversity. Cowpea (Vigna unguiculata (L.) Walp) is Somalia's most important food crop after maize and sorghum, where it provides households with affordable protein and supports the sustainability of low-input farming systems. This study aimed to assess the current status of cowpea production, identify breeding priorities across three agroecological zones in southern Somalia, and establish a core germplasm collection for future breeding programs. Farmer surveys were conducted in Baidoa, Afgoie and Jowhar, involving interviews with 150 farmers using a semi-structured questionnaire. Over 60% of farmers cultivated cowpea for both household consumption and market sale. While cowpea was predominantly grown as an intercrop, nearly 45% of farmers in Afgoie produced it as a sole crop. Regional differences in varietal preferences were evident: more farmers in Afgoie preferred erect, uniformly maturing cultivars with dark-red seeds, while other regions showed more diverse preferences. Production constraints also varied by region, with drought being the primary limitation in Baidoa, and pests and diseases the major challenges in Afgoie and Jowhar. A germplasm collection representing Somalia's cowpea diversity from pre- and post-civil war periods was established, supplemented by global diversity and accessions with desirable agronomic traits. These genetic resources, together with farmer insights, provide a foundation for targeted breeding to improve cowpea productivity and support future food security in Somalia.
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High nitrogen (N) application usually increases protein content to impair rice cooking and eating quality. Mitigating this deterioration under high N conditions remains to be explored. Alternate wetting and moderate drying irrigation (AWMD) can interact with N fertilizer to improve rice quality. To investigate the effects of AWMD on rice protein content and cooking and eating quality, Nanjing 9108 (NJ9108), a superior-tasting japonica variety, was planted. With 150 kg N hm−2 applied as the base-tiller fertilizer, four panicle-stage N rates (0, 70, 140, and 210 kg hm−2, denoted as 0, 70, 140, and 210 N, respectively) were tested. Two irrigation regimes of conventional irrigation (CI) and AWMD were implemented during the grain-filling stage. The results showed that increasing panicle N fertilizer enhanced the contents of protein and total amino acids (TAAs) in milled rice, as well as the activities and gene expressions of the key enzymes involved in protein synthesis. Compared with CI, AWMD increased the contents of protein and TAAs and enzymatic activity and gene expressions under 0 and 70 N treatments, but it reduced these parameters at high panicle N rates (140 and 210 N). Principal component analysis indicated that expression levels of OsAAT and OsAlaAT1 genes and TAAs content can be key parameters for evaluating protein synthetic capacity in rice grains. Correlation analysis revealed that the measured parameters related to protein synthesis had a significant negative correlation with rice cooking and eating quality. These results suggest that the AWMD regime can alleviate the decline in rice cooking and eating quality by reducing protein content at high panicle N fertilizer levels. The taste quality of superior taste japonica rice can be improved by adopting the AWMD regime under high panicle N fertilizer conditions.
高施氮通常会增加大米的蛋白质含量,从而影响大米的蒸煮和食用品质。在高氮条件下减轻这种恶化仍有待探索。干湿交替灌溉(AWMD)可与氮肥相互作用,提高稻米品质。以优质粳稻品种南京9108 (NJ9108)为试验材料,研究AWMD对水稻蛋白质含量及蒸煮食味品质的影响。施150kg N hm - 2作为基分蘖肥,试验了4种穗期施氮量(0、70、140和210 kg hm - 2,分别记为0、70、140和210 N)。灌浆期采用常规灌水和AWMD两种灌溉方式。结果表明,增加穗部施氮量可提高精米蛋白质和总氨基酸(TAAs)含量,促进蛋白质合成关键酶的活性和基因表达。与CI相比,AWMD在0和70 N处理下提高了蛋白质和TAAs含量、酶活性和基因表达量,但在高施氮量(140和210 N)处理下降低了这些参数。主成分分析表明,OsAAT和OsAlaAT1基因的表达水平和TAAs含量可作为评价水稻籽粒蛋白质合成能力的关键参数。相关分析表明,测定的蛋白质合成相关参数与大米蒸煮和食用品质呈显著负相关。综上所述,在高穗氮肥水平下,AWMD可以通过降低蛋白质含量来缓解稻米蒸煮品质和食味品质的下降。在高穗氮肥条件下,采用AWMD制度可以改善优质粳稻的食味品质。
{"title":"Improving Rice Cooking and Eating Quality: Alternate Wetting and Moderate Drying Irrigation Reduces Protein Content Under High Nitrogen","authors":"Yunji Xu, Yu Huang, Xuelian Weng, Indrila Dey Traye, Kele Li, Weiyang Zhang, Kuanyu Zhu, Hao Zhang, Zhiqin Wang, Jianchang Yang","doi":"10.1002/fes3.70179","DOIUrl":"https://doi.org/10.1002/fes3.70179","url":null,"abstract":"<p>High nitrogen (N) application usually increases protein content to impair rice cooking and eating quality. Mitigating this deterioration under high N conditions remains to be explored. Alternate wetting and moderate drying irrigation (AWMD) can interact with N fertilizer to improve rice quality. To investigate the effects of AWMD on rice protein content and cooking and eating quality, Nanjing 9108 (NJ9108), a superior-tasting <i>japonica</i> variety, was planted. With 150 kg N hm<sup>−2</sup> applied as the base-tiller fertilizer, four panicle-stage N rates (0, 70, 140, and 210 kg hm<sup>−2</sup>, denoted as 0, 70, 140, and 210 N, respectively) were tested. Two irrigation regimes of conventional irrigation (CI) and AWMD were implemented during the grain-filling stage. The results showed that increasing panicle N fertilizer enhanced the contents of protein and total amino acids (TAAs) in milled rice, as well as the activities and gene expressions of the key enzymes involved in protein synthesis. Compared with CI, AWMD increased the contents of protein and TAAs and enzymatic activity and gene expressions under 0 and 70 N treatments, but it reduced these parameters at high panicle N rates (140 and 210 N). Principal component analysis indicated that expression levels of OsAAT and OsAlaAT1 genes and TAAs content can be key parameters for evaluating protein synthetic capacity in rice grains. Correlation analysis revealed that the measured parameters related to protein synthesis had a significant negative correlation with rice cooking and eating quality. These results suggest that the AWMD regime can alleviate the decline in rice cooking and eating quality by reducing protein content at high panicle N fertilizer levels. The taste quality of superior taste <i>japonica</i> rice can be improved by adopting the AWMD regime under high panicle N fertilizer conditions.</p>","PeriodicalId":54283,"journal":{"name":"Food and Energy Security","volume":"15 1","pages":""},"PeriodicalIF":4.5,"publicationDate":"2025-12-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/fes3.70179","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145887566","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
High nitrogen (N) application usually increases protein content to impair rice cooking and eating quality. Mitigating this deterioration under high N conditions remains to be explored. Alternate wetting and moderate drying irrigation (AWMD) can interact with N fertilizer to improve rice quality. To investigate the effects of AWMD on rice protein content and cooking and eating quality, Nanjing 9108 (NJ9108), a superior-tasting japonica variety, was planted. With 150 kg N hm−2 applied as the base-tiller fertilizer, four panicle-stage N rates (0, 70, 140, and 210 kg hm−2, denoted as 0, 70, 140, and 210 N, respectively) were tested. Two irrigation regimes of conventional irrigation (CI) and AWMD were implemented during the grain-filling stage. The results showed that increasing panicle N fertilizer enhanced the contents of protein and total amino acids (TAAs) in milled rice, as well as the activities and gene expressions of the key enzymes involved in protein synthesis. Compared with CI, AWMD increased the contents of protein and TAAs and enzymatic activity and gene expressions under 0 and 70 N treatments, but it reduced these parameters at high panicle N rates (140 and 210 N). Principal component analysis indicated that expression levels of OsAAT and OsAlaAT1 genes and TAAs content can be key parameters for evaluating protein synthetic capacity in rice grains. Correlation analysis revealed that the measured parameters related to protein synthesis had a significant negative correlation with rice cooking and eating quality. These results suggest that the AWMD regime can alleviate the decline in rice cooking and eating quality by reducing protein content at high panicle N fertilizer levels. The taste quality of superior taste japonica rice can be improved by adopting the AWMD regime under high panicle N fertilizer conditions.
高施氮通常会增加大米的蛋白质含量,从而影响大米的蒸煮和食用品质。在高氮条件下减轻这种恶化仍有待探索。干湿交替灌溉(AWMD)可与氮肥相互作用,提高稻米品质。以优质粳稻品种南京9108 (NJ9108)为试验材料,研究AWMD对水稻蛋白质含量及蒸煮食味品质的影响。施150kg N hm - 2作为基分蘖肥,试验了4种穗期施氮量(0、70、140和210 kg hm - 2,分别记为0、70、140和210 N)。灌浆期采用常规灌水和AWMD两种灌溉方式。结果表明,增加穗部施氮量可提高精米蛋白质和总氨基酸(TAAs)含量,促进蛋白质合成关键酶的活性和基因表达。与CI相比,AWMD在0和70 N处理下提高了蛋白质和TAAs含量、酶活性和基因表达量,但在高施氮量(140和210 N)处理下降低了这些参数。主成分分析表明,OsAAT和OsAlaAT1基因的表达水平和TAAs含量可作为评价水稻籽粒蛋白质合成能力的关键参数。相关分析表明,测定的蛋白质合成相关参数与大米蒸煮和食用品质呈显著负相关。综上所述,在高穗氮肥水平下,AWMD可以通过降低蛋白质含量来缓解稻米蒸煮品质和食味品质的下降。在高穗氮肥条件下,采用AWMD制度可以改善优质粳稻的食味品质。
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