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Alterations in neural circuit dynamics between the limbic network and prefrontal/default mode network in patients with generalized anxiety disorder 广泛性焦虑症患者边缘网络与前额叶/默认模式网络之间的神经回路动态变化
IF 3.4 2区 医学 Q2 NEUROIMAGING Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103640

Background

Widespread functional alterations have been implicated in patients with generalized anxiety disorder (GAD). However, most studies have primarily focused on static brain network features in patients with GAD. The current research focused on exploring the dynamics within functional brain networks among individuals diagnosed with GAD.

Methods

Seventy-five participants were divided into patients with GAD and healthy controls (HCs), and resting-state functional magnetic resonance imaging data were collected. The severity of symptoms was measured using the Hamilton Anxiety Scale and the Patient Health Questionnaire. Co-activation pattern (CAP) analysis, centered on the bed nucleus of the stria terminalis, was applied to explore network dynamics. The capability of these dynamic characteristics to distinguish between patients with GAD and HCs was evaluated using a support vector machine.

Results

Patients with GAD exhibited disruptions in the limbic-prefrontal and limbic-default-mode network circuits. Particularly noteworthy was the marked reduction in dynamic indicators such as occurrence, EntriesFromBaseline, ExitsToBaseline, in-degree, out-degree, and resilience. Moreover, these decreased dynamic features effectively distinguished the GAD group from the HC in this study.

Conclusions

The current findings revealed the underlying brain networks associated with compromised emotion regulation in individuals with GAD. The dynamic reduction in connectivity between the limbic-default mode network and limbic-prefrontal networks could potentially act as a biomarker and therapeutic target for GAD in the future.

背景广泛性焦虑症(GAD)患者普遍存在功能性改变。然而,大多数研究主要关注 GAD 患者的静态脑网络特征。方法将 75 名参与者分为 GAD 患者和健康对照组(HCs),并收集静息态功能磁共振成像数据。采用汉密尔顿焦虑量表和患者健康问卷测量症状的严重程度。共激活模式(CAP)分析以纹状体末端床核为中心,用于探索网络动态。结果GAD患者表现出边缘-前额叶和边缘-默认模式网络回路的中断。尤其值得注意的是,发生率、从基线进入量、从基线退出量、进入度、退出度和恢复力等动态指标明显减少。此外,在本研究中,这些减少的动态特征有效地区分了 GAD 组和 HC 组。边缘-默认模式网络和边缘-前额叶网络之间连接的动态减少有可能在未来成为 GAD 的生物标记物和治疗目标。
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引用次数: 0
Disbalanced recruitment of crossed and uncrossed cerebello-thalamic pathways during deep brain stimulation is predictive of delayed therapy escape in essential tremor 在深部脑刺激过程中,交叉和非交叉大脑小脑通路的不均衡招募可预测本质性震颤的延迟治疗效果
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103576
Bastian E.A. Sajonz , Marvin L. Frommer , Marco Reisert , Ganna Blazhenets , Nils Schröter , Alexander Rau , Thomas Prokop , Peter C. Reinacher , Michel Rijntjes , Horst Urbach , Philipp T. Meyer , Volker A. Coenen

Background

Thalamic deep brain stimulation (DBS) is an efficacious treatment for drug-resistant essential tremor (ET) and the dentato-rubro-thalamic tract (DRT) constitutes an important target structure. However, up to 40% of patients habituate and lose treatment efficacy over time, frequently accompanied by a stimulation-induced cerebellar syndrome. The phenomenon termed delayed therapy escape (DTE) is insufficiently understood. Our previous work showed that DTE clinically is pronounced on the non-dominant side and suggested that differential involvement of crossed versus uncrossed DRT (DRTx/DRTu) might play a role in DTE development.

Methods

We retrospectively enrolled right-handed patients under bilateral thalamic DBS >12 months for ET from a cross-sectional study. They were characterized with the Fahn-Tolosa-Marin Tremor Rating Scale (FTMTRS) and Scale for the Assessment and Rating of Ataxia (SARA) scores at different timepoints. Normative fiber tractographic evaluations of crossed and uncrossed cerebellothalamic pathways and volume of activated tissue (VAT) studies together with [18F]Fluorodeoxyglucose positron emission tomography were applied.

Results

A total of 29 patients met the inclusion criteria. Favoring DRTu over DRTx in the non-dominant VAT was associated with DTE (R2 = 0.4463, p < 0.01) and ataxia (R2 = 0.2319, p < 0.01). Moreover, increasing VAT size on the right (non-dominant) side was associated at trend level with more asymmetric glucose metabolism shifting towards the right (dominant) dentate nucleus.

Conclusion

Our results suggest that a disbalanced recruitment of DRTu in the non-dominant VAT induces detrimental stimulation effects on the dominant cerebellar outflow (together with contralateral stimulation) leading to DTE and thus hampering the overall treatment efficacy.

背景丘脑深部脑刺激(DBS)是治疗耐药性本质性震颤(ET)的有效方法,而齿状突触丘脑束(DRT)是重要的靶结构。然而,多达 40% 的患者会随着时间的推移而习惯性丧失疗效,并经常伴有刺激诱发的小脑综合征。人们对这种被称为 "延迟治疗逃避"(DTE)的现象认识不足。我们之前的研究表明,DTE 在临床上以非优势侧明显,并提示交叉与非交叉 DRT(DRTx/DRTu)的不同参与可能在 DTE 的发展中起作用。在不同的时间点,我们使用法恩-托洛萨-马林震颤评分量表(Fahn-Tolosa-Marin Tremor Rating Scale,FTMTRS)和共济失调评估与评分量表(Scale for the Assessment and Rating of Ataxia,SARA)对这些患者进行了特征描述。对交叉和未交叉的小脑通路进行了标准纤维束学评估,并结合[18F]氟脱氧葡萄糖正电子发射断层扫描对激活组织体积(VAT)进行了研究。非优势 VAT 中的 DRTu 优于 DRTx 与 DTE(R2 = 0.4463,p < 0.01)和共济失调(R2 = 0.2319,p < 0.01)相关。此外,右侧(非优势侧)VAT 的增大与葡萄糖代谢向右侧(优势侧)齿状核转移的不对称趋势相关。结论我们的研究结果表明,非优势侧 VAT 中 DRTu 的不平衡招募会对优势侧小脑外流产生有害的刺激作用(与对侧刺激一起),导致 DTE,从而阻碍整体治疗效果。
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引用次数: 0
A whole-brain neuromark resting-state fMRI analysis of first-episode and early psychosis: Evidence of aberrant cortical-subcortical-cerebellar functional circuitry 对首发和早期精神病的全脑神经标记静息态fMRI分析:皮层-皮层下-小脑功能回路异常的证据
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103584
Kyle M. Jensen , Vince D. Calhoun , Zening Fu , Kun Yang , Andreia V. Faria , Koko Ishizuka , Akira Sawa , Pablo Andrés-Camazón , Brian A. Coffman , Dylan Seebold , Jessica A. Turner , Dean F. Salisbury , Armin Iraji

Psychosis (including symptoms of delusions, hallucinations, and disorganized conduct/speech) is a main feature of schizophrenia and is frequently present in other major psychiatric illnesses. Studies in individuals with first-episode (FEP) and early psychosis (EP) have the potential to interpret aberrant connectivity associated with psychosis during a period with minimal influence from medication and other confounds. The current study uses a data-driven whole-brain approach to examine patterns of aberrant functional network connectivity (FNC) in a multi-site dataset comprising resting-state functional magnetic resonance images (rs-fMRI) from 117 individuals with FEP or EP and 130 individuals without a psychiatric disorder, as controls. Accounting for age, sex, race, head motion, and multiple imaging sites, differences in FNC were identified between psychosis and control participants in cortical (namely the inferior frontal gyrus, superior medial frontal gyrus, postcentral gyrus, supplementary motor area, posterior cingulate cortex, and superior and middle temporal gyri), subcortical (the caudate, thalamus, subthalamus, and hippocampus), and cerebellar regions. The prominent pattern of reduced cerebellar connectivity in psychosis is especially noteworthy, as most studies focus on cortical and subcortical regions, neglecting the cerebellum. The dysconnectivity reported here may indicate disruptions in cortical-subcortical-cerebellar circuitry involved in rudimentary cognitive functions which may serve as reliable correlates of psychosis.

精神病(包括妄想、幻觉和行为/言语混乱等症状)是精神分裂症的主要特征,也经常出现在其他主要精神病中。对首发(FEP)和早期精神病(EP)患者的研究有可能解释与精神病相关的异常连接,因为在此期间药物和其他混杂因素的影响最小。目前的研究采用数据驱动的全脑方法,在一个由117名FEP或EP患者和130名无精神障碍患者作为对照的静息态功能磁共振图像(rs-fMRI)组成的多站点数据集中,研究异常功能网络连接(FNC)的模式。考虑到年龄、性别、种族、头部运动和多个成像部位,结果发现精神病患者和对照组患者在皮质(即额叶下回、额叶上内侧回、中央后回、辅助运动区、扣带回后皮质、颞上回和颞中回)、皮质下(尾状核、丘脑、小丘脑下和海马)和小脑区域的 FNC 存在差异。特别值得注意的是,精神病患者的小脑连通性显著降低,因为大多数研究都侧重于皮层和皮层下区域,而忽略了小脑。这里报告的连接性障碍可能表明皮层-皮层下-小脑回路出现了紊乱,这些回路参与了基本的认知功能,可能是精神病的可靠相关因素。
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引用次数: 0
Behavioral and neuroanatomical correlates of facial emotion processing in post-stroke depression 中风后抑郁症患者面部情绪处理的行为和神经解剖相关性
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103586
Janusz L Koob , Maximilian Gorski , Sebastian Krick , Maike Mustin , Gereon R. Fink , Christian Grefkes , Anne K. Rehme

Background

Emotion processing deficits are known to accompany depressive symptoms and are often seen in stroke patients. Little is known about the influence of post-stroke depressive (PSD) symptoms and specific brain lesions on altered emotion processing abilities and how these phenomena develop over time. This potential relationship may impact post-stroke rehabilitation of neurological and psychosocial function. To address this scientific gap, we investigated the relationship between PSD symptoms and emotion processing abilities in a longitudinal study design from the first days post-stroke into the early chronic phase.

Methods

Twenty-six ischemic stroke patients performed an emotion processing task on videos with emotional faces ('happy,' 'sad,' 'anger,' 'fear,' and 'neutral') at different intensity levels (20%, 40%, 60%, 80%, 100%). Recognition accuracies and response times were measured, as well as scores of depressive symptoms (Montgomery-Åsberg Depression Rating Scale). Twenty-eight healthy participants matched in age and sex were included as a control group. Whole-brain support-vector regression lesion-symptom mapping (SVR-LSM) analyses were performed to investigate whether specific lesion locations were associated with the recognition accuracy of specific emotion categories.

Results

Stroke patients performed worse in overall recognition accuracy compared to controls, specifically in the recognition of happy, sad, and fearful faces. Notably, more depressed stroke patients showed an increased processing towards specific negative emotions, as they responded significantly faster to angry faces and recognized sad faces of low intensities significantly more accurately. These effects obtained for the first days after stroke partly persisted to follow-up assessment several months later. SVR-LSM analyses revealed that inferior and middle frontal regions (IFG/MFG) and insula and putamen were associated with emotion-recognition deficits in stroke. Specifically, recognizing happy facial expressions was influenced by lesions affecting the anterior insula, putamen, IFG, MFG, orbitofrontal cortex, and rolandic operculum. Lesions in the posterior insula, rolandic operculum, and MFG were also related to reduced recognition accuracy of fearful facial expressions, whereas recognition deficits of sad faces were associated with frontal pole, IFG, and MFG damage.

Conclusion

PSD symptoms facilitate processing negative emotional stimuli, specifically angry and sad facial expressions. The recognition accuracy of different emotional categories was linked to brain lesions in emotion-related processing circuits, including insula, basal ganglia, IFG, and MFG. In summary, our study provides support for psychosocial and neural factors underlying emotional processing after stroke, contributing to the pathophysiology of PSD.

背景众所周知,情绪处理障碍伴随着抑郁症状,而且经常见于中风患者。关于卒中后抑郁症(PSD)症状和特定脑损伤对情感处理能力改变的影响,以及这些现象如何随时间发展,人们知之甚少。这种潜在的关系可能会影响中风后神经和社会心理功能的康复。为了弥补这一科学空白,我们采用纵向研究设计调查了 PSD 症状与情绪处理能力之间的关系,研究范围从脑卒中后的最初几天到早期慢性期。方法26 名缺血性脑卒中患者在不同强度水平(20%、40%、60%、80%、100%)的情绪面孔("快乐"、"悲伤"、"愤怒"、"恐惧 "和 "中性")视频上进行情绪处理任务。对识别准确率和反应时间以及抑郁症状评分(蒙哥马利-奥斯伯格抑郁评分量表)进行了测量。对照组包括 28 名年龄和性别匹配的健康参与者。结果 与对照组相比,脑卒中患者的总体识别准确率较低,尤其是在识别快乐、悲伤和恐惧的面孔方面。值得注意的是,抑郁程度较高的中风患者对特定负面情绪的处理能力更强,因为他们对愤怒面孔的反应明显更快,对低强度悲伤面孔的识别也明显更准确。这些在中风后最初几天获得的效应部分持续到几个月后的随访评估中。SVR-LSM 分析表明,下额区和中额区(IFG/MFG)以及岛叶和丘脑与中风后的情绪识别障碍有关。具体来说,识别快乐的面部表情受到前脑岛、丘脑、IFG、MFG、眶额皮层和喙突的影响。后脑岛、杏仁核和MFG的病变也与恐惧面部表情识别准确率的降低有关,而悲伤面部表情的识别障碍则与额极、IFG和MFG的损伤有关。不同情绪类别的识别准确性与情绪相关处理回路的脑损伤有关,包括岛叶、基底节、IFG 和 MFG。总之,我们的研究为中风后情绪处理的社会心理和神经因素提供了支持,有助于 PSD 的病理生理学。
{"title":"Behavioral and neuroanatomical correlates of facial emotion processing in post-stroke depression","authors":"Janusz L Koob ,&nbsp;Maximilian Gorski ,&nbsp;Sebastian Krick ,&nbsp;Maike Mustin ,&nbsp;Gereon R. Fink ,&nbsp;Christian Grefkes ,&nbsp;Anne K. Rehme","doi":"10.1016/j.nicl.2024.103586","DOIUrl":"https://doi.org/10.1016/j.nicl.2024.103586","url":null,"abstract":"<div><h3>Background</h3><p>Emotion processing deficits are known to accompany depressive symptoms and are often seen in stroke patients. Little is known about the influence of post-stroke depressive (PSD) symptoms and specific brain lesions on altered emotion processing abilities and how these phenomena develop over time. This potential relationship may impact post-stroke rehabilitation of neurological and psychosocial function. To address this scientific gap, we investigated the relationship between PSD symptoms and emotion processing abilities in a longitudinal study design from the first days post-stroke into the early chronic phase.</p></div><div><h3>Methods</h3><p>Twenty-six ischemic stroke patients performed an emotion processing task on videos with emotional faces ('happy,' 'sad,' 'anger,' 'fear,' and 'neutral') at different intensity levels (20%, 40%, 60%, 80%, 100%). Recognition accuracies and response times were measured, as well as scores of depressive symptoms (Montgomery-Åsberg Depression Rating Scale). Twenty-eight healthy participants matched in age and sex were included as a control group. Whole-brain support-vector regression lesion-symptom mapping (SVR-LSM) analyses were performed to investigate whether specific lesion locations were associated with the recognition accuracy of specific emotion categories.</p></div><div><h3>Results</h3><p>Stroke patients performed worse in overall recognition accuracy compared to controls, specifically in the recognition of happy, sad, and fearful faces. Notably, more depressed stroke patients showed an increased processing towards specific negative emotions, as they responded significantly faster to angry faces and recognized sad faces of low intensities significantly more accurately. These effects obtained for the first days after stroke partly persisted to follow-up assessment several months later. SVR-LSM analyses revealed that inferior and middle frontal regions (IFG/MFG) and insula and putamen were associated with emotion-recognition deficits in stroke. Specifically, recognizing happy facial expressions was influenced by lesions affecting the anterior insula, putamen, IFG, MFG, orbitofrontal cortex, and rolandic operculum. Lesions in the posterior insula, rolandic operculum, and MFG were also related to reduced recognition accuracy of fearful facial expressions, whereas recognition deficits of sad faces were associated with frontal pole, IFG, and MFG damage.</p></div><div><h3>Conclusion</h3><p>PSD symptoms facilitate processing negative emotional stimuli, specifically angry and sad facial expressions. The recognition accuracy of different emotional categories was linked to brain lesions in emotion-related processing circuits, including insula, basal ganglia, IFG, and MFG. In summary, our study provides support for psychosocial and neural factors underlying emotional processing after stroke, contributing to the pathophysiology of PSD.</p></div>","PeriodicalId":54359,"journal":{"name":"Neuroimage-Clinical","volume":null,"pages":null},"PeriodicalIF":4.2,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2213158224000251/pdfft?md5=5fab11e03376cae3b4b6225fa025f266&pid=1-s2.0-S2213158224000251-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139999305","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Neurorestorative effects of cerebellar transcranial direct current stimulation on social prediction of adolescents and young adults with congenital cerebellar malformations 小脑经颅直流电刺激对患有先天性小脑畸形的青少年和年轻人的社交预测的神经恢复作用
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103582
Viola Oldrati , Niccolò Butti , Elisabetta Ferrari , Sandra Strazzer , Romina Romaniello , Renato Borgatti , Cosimo Urgesi , Alessandra Finisguerra

Background

Converging evidence points to impairments of the predictive function exerted by the cerebellum as one of the causes of the social cognition deficits observed in patients with cerebellar disorders.

Objective

We tested the neurorestorative effects of cerebellar transcranial direct current stimulation (ctDCS) on the use of contextual expectations to interpret actions occurring in ambiguous sensory sceneries in a sample of adolescents and young adults with congenital, non-progressive cerebellar malformation (CM).

Methods

We administered an action prediction task in which, in an implicit-learning phase, the probability of co-occurrence between actions and contextual elements was manipulated to form either strongly or moderately informative expectations. Subsequently, in a testing phase, we probed the use of these contextual expectations for predicting ambiguous (i.e., temporally occluded) actions. In a sham-controlled, within-subject design, participants received anodic or sham ctDCS during the task.

Results

Anodic ctDCS, compared to sham, improved patients’ ability to use contextual expectations to predict the unfolding of actions embedded in moderately, but not strongly, informative contexts.

Conclusions

These findings corroborate the role of the cerebellum in using previously learned contextual associations to predict social events and document the efficacy of ctDCS to boost social prediction in patients with congenital cerebellar malformation. The study encourages the further exploration of ctDCS as a neurorestorative tool for the neurorehabilitation of social cognition abilities in neurological, neuropsychiatric, and neurodevelopmental disorders featured by macro- or micro-structural alterations of the cerebellum.

小脑经颅直流电刺激(ctDCS)对使用上下文预期来解释发生在模棱两可的感官场景中的动作的神经恢复作用,我们对患有先天性非进行性小脑畸形(CM)的青少年进行了测试。方法我们进行了一项动作预测任务,在该任务的内隐学习阶段,操纵动作与上下文元素之间的共现概率,以形成强烈或中等信息量的预期。随后,在测试阶段,我们测试了这些语境预期在预测模糊(即时间上隐蔽)动作时的使用情况。这些发现证实了小脑在利用先前学习到的上下文关联预测社会事件中的作用,并证明了ctDCS对先天性小脑畸形患者提高社会预测能力的功效。这项研究鼓励人们进一步探索将ctDCS作为一种神经恢复工具,用于小脑宏观或微观结构改变的神经、神经精神和神经发育疾病患者社交认知能力的神经康复。
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引用次数: 0
LST-AI: A deep learning ensemble for accurate MS lesion segmentation LST-AI:用于准确分割多发性硬化症病灶的深度学习集合
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103611
Tun Wiltgen , Julian McGinnis , Sarah Schlaeger , Florian Kofler , CuiCi Voon , Achim Berthele , Daria Bischl , Lioba Grundl , Nikolaus Will , Marie Metz , David Schinz , Dominik Sepp , Philipp Prucker , Benita Schmitz-Koep , Claus Zimmer , Bjoern Menze , Daniel Rueckert , Bernhard Hemmer , Jan Kirschke , Mark Mühlau , Benedikt Wiestler

Automated segmentation of brain white matter lesions is crucial for both clinical assessment and scientific research in multiple sclerosis (MS). Over a decade ago, we introduced an engineered lesion segmentation tool, LST. While recent lesion segmentation approaches have leveraged artificial intelligence (AI), they often remain proprietary and difficult to adopt. As an open-source tool, we present LST-AI, an advanced deep learning-based extension of LST that consists of an ensemble of three 3D U-Nets.

LST-AI explicitly addresses the imbalance between white matter (WM) lesions and non-lesioned WM. It employs a composite loss function incorporating binary cross-entropy and Tversky loss to improve segmentation of the highly heterogeneous MS lesions. We train the network ensemble on 491 MS pairs of T1-weighted and FLAIR images, collected in-house from a 3T MRI scanner, and expert neuroradiologists manually segmented the utilized lesion maps for training. LST-AI also includes a lesion location annotation tool, labeling lesions as periventricular, infratentorial, and juxtacortical according to the 2017 McDonald criteria, and, additionally, as subcortical. We conduct evaluations on 103 test cases consisting of publicly available data using the Anima segmentation validation tools and compare LST-AI with several publicly available lesion segmentation models.

Our empirical analysis shows that LST-AI achieves superior performance compared to existing methods. Its Dice and F1 scores exceeded 0.62, outperforming LST, SAMSEG (Sequence Adaptive Multimodal SEGmentation), and the popular nnUNet framework, which all scored below 0.56. Notably, LST-AI demonstrated exceptional performance on the MSSEG-1 challenge dataset, an international WM lesion segmentation challenge, with a Dice score of 0.65 and an F1 score of 0.63—surpassing all other competing models at the time of the challenge. With increasing lesion volume, the lesion detection rate rapidly increased with a detection rate of >75% for lesions with a volume between 10 mm3 and 100 mm3. Given its higher segmentation performance, we recommend that research groups currently using LST transition to LST-AI. To facilitate broad adoption, we are releasing LST-AI as an open-source model, available as a command-line tool, dockerized container, or Python script, enabling diverse applications across multiple platforms.

脑白质病变的自动分割对于多发性硬化症(MS)的临床评估和科学研究都至关重要。十多年前,我们推出了一种工程病灶分割工具 LST。虽然最近的病灶分割方法利用了人工智能(AI),但它们往往仍然是专有的,难以采用。作为一款开源工具,我们推出了 LST-AI,它是 LST 基于深度学习的高级扩展,由三个三维 U-Nets 组成。LST-AI 明确解决了白质(WM)病变和非病变 WM 之间的不平衡问题,它采用了一种包含二元交叉熵和 Tversky 损失的复合损失函数,以改善高度异质性 MS 病变的分割。我们在内部 3T 磁共振成像扫描仪收集的 491 对 MS T1 加权和 FLAIR 图像上训练网络集合,并由神经放射学专家手动分割用于训练的病灶图。LST-AI 还包括病灶位置标注工具,可根据 2017 年 McDonald 标准将病灶标注为脑室周围、脑室下和并皮质,此外还可标注为皮质下。我们使用Anima分割验证工具对103个由公开数据组成的测试案例进行了评估,并将LST-AI与几种公开的病灶分割模型进行了比较。其 Dice 和 F1 分数超过 0.62,优于 LST、SAMSEG(序列自适应多模态 SEGmentation)和流行的 nnUNet 框架,它们的分数都低于 0.56。值得注意的是,LST-AI 在国际 WM 病灶分割挑战赛 MSSEG-1 数据集上表现优异,Dice 得分为 0.65,F1 得分为 0.63,超越了当时所有其他竞争模型。随着病变体积的增大,病变检测率迅速提高,体积在 10 立方毫米到 100 立方毫米之间的病变检测率达到 75%。鉴于其较高的分割性能,我们建议目前使用 LST 的研究小组过渡到 LST-AI。为便于广泛采用,我们将以开源模式发布 LST-AI,可作为命令行工具、docker 化容器或 Python 脚本使用,从而实现跨平台的多样化应用。
{"title":"LST-AI: A deep learning ensemble for accurate MS lesion segmentation","authors":"Tun Wiltgen ,&nbsp;Julian McGinnis ,&nbsp;Sarah Schlaeger ,&nbsp;Florian Kofler ,&nbsp;CuiCi Voon ,&nbsp;Achim Berthele ,&nbsp;Daria Bischl ,&nbsp;Lioba Grundl ,&nbsp;Nikolaus Will ,&nbsp;Marie Metz ,&nbsp;David Schinz ,&nbsp;Dominik Sepp ,&nbsp;Philipp Prucker ,&nbsp;Benita Schmitz-Koep ,&nbsp;Claus Zimmer ,&nbsp;Bjoern Menze ,&nbsp;Daniel Rueckert ,&nbsp;Bernhard Hemmer ,&nbsp;Jan Kirschke ,&nbsp;Mark Mühlau ,&nbsp;Benedikt Wiestler","doi":"10.1016/j.nicl.2024.103611","DOIUrl":"https://doi.org/10.1016/j.nicl.2024.103611","url":null,"abstract":"<div><p>Automated segmentation of brain white matter lesions is crucial for both clinical assessment and scientific research in multiple sclerosis (MS). Over a decade ago, we introduced an engineered lesion segmentation tool, LST. While recent lesion segmentation approaches have leveraged artificial intelligence (AI), they often remain proprietary and difficult to adopt. As an open-source tool, we present LST-AI, an advanced deep learning-based extension of LST that consists of an ensemble of three 3D U-Nets.</p><p>LST-AI explicitly addresses the imbalance between white matter (WM) lesions and non-lesioned WM. It employs a composite loss function incorporating binary cross-entropy and Tversky loss to improve segmentation of the highly heterogeneous MS lesions. We train the network ensemble on 491 MS pairs of T1-weighted and FLAIR images, collected in-house from a 3T MRI scanner, and expert neuroradiologists manually segmented the utilized lesion maps for training. LST-AI also includes a lesion location annotation tool, labeling lesions as periventricular, infratentorial, and juxtacortical according to the 2017 McDonald criteria, and, additionally, as subcortical. We conduct evaluations on 103 test cases consisting of publicly available data using the Anima segmentation validation tools and compare LST-AI with several publicly available lesion segmentation models.</p><p>Our empirical analysis shows that LST-AI achieves superior performance compared to existing methods. Its Dice and F1 scores exceeded 0.62, outperforming LST, SAMSEG (Sequence Adaptive Multimodal SEGmentation), and the popular nnUNet framework, which all scored below 0.56. Notably, LST-AI demonstrated exceptional performance on the MSSEG-1 challenge dataset, an international WM lesion segmentation challenge, with a Dice score of 0.65 and an F1 score of 0.63—surpassing all other competing models at the time of the challenge. With increasing lesion volume, the lesion detection rate rapidly increased with a detection rate of &gt;75% for lesions with a volume between 10 mm<sup>3</sup> and 100 mm<sup>3</sup>. Given its higher segmentation performance, we recommend that research groups currently using LST transition to LST-AI. To facilitate broad adoption, we are releasing LST-AI as an open-source model, available as a command-line tool, dockerized container, or Python script, enabling diverse applications across multiple platforms.</p></div>","PeriodicalId":54359,"journal":{"name":"Neuroimage-Clinical","volume":null,"pages":null},"PeriodicalIF":4.2,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2213158224000500/pdfft?md5=59c3f6172246e4c5339cc715768cc76a&pid=1-s2.0-S2213158224000500-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140825751","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative overview of multi-shell diffusion MRI models to characterize the microstructure of multiple sclerosis lesions and periplaques 描述多发性硬化病灶和斑块周围微观结构的多壳弥散核磁共振成像模型比较概述
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103593
Colin Vanden Bulcke , Anna Stölting , Dragan Maric , Benoît Macq , Martina Absinta , Pietro Maggi

In multiple sclerosis (MS), accurate in vivo characterization of the heterogeneous lesional and extra-lesional tissue pathology remains challenging. Marshalling several advanced imaging techniques — quantitative relaxation time (T1) mapping, a model-free average diffusion signal approach and four multi-shell diffusion models — this study investigates the performance of multi-shell diffusion models and characterizes the microstructural damage within (i) different MS lesion types — active, chronic active, and chronic inactive — (ii) their respective periplaque white matter (WM), and (iii) the surrounding normal-appearing white matter (NAWM). In 83 MS participants (56 relapsing-remitting, 27 progressive) and 23 age and sex-matched healthy controls (HC), we analysed a total of 317 paramagnetic rim lesions (PRL+), 232 non-paramagnetic rim lesions (PRL-), 38 contrast-enhancing lesions (CEL). Consistent with previous findings and histology, our analysis revealed the ability of advanced multi-shell diffusion models to characterize the unique microstructural patterns of CEL, and to elucidate their possible evolution into a resolving (chronic inactive) vs smoldering (chronic active) inflammatory stage. In addition, we showed that the microstructural damage extends well beyond the MRI-visible lesion edge, gradually fading out while moving outward from the lesion edge into the immediate WM periplaque and the NAWM, the latter still characterized by diffuse microstructural damage in MS vs HC. This study also emphasizes the critical role of selecting appropriate diffusion models to elucidate the complex pathological architecture of MS lesions and their periplaque. More specifically, multi-compartment diffusion models based on biophysically interpretable metrics such as neurite orientation dispersion and density (NODDI; mean auc=0.8002) emerge as the preferred choice for MS applications, while simpler models based on a representation of the diffusion signal, like diffusion tensor imaging (DTI; mean auc=0.6942), consistently underperformed, also when compared to T1 mapping (mean auc=0.73375).

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引用次数: 0
Structural connectivity of low-frequency subthalamic stimulation for improving stride length in Parkinson’s disease 低频丘脑下刺激改善帕金森病患者步长的结构连通性
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103591
Alexander Calvano , Urs Kleinholdermann , Amelie-Sophie Heun , Miriam H.A. Bopp , Christopher Nimsky , Lars Timmermann , David J. Pedrosa

Background

A reduction in stride length is considered a key characteristic of gait kinematics in Parkinson’s disease (PD) and has been identified as a predictor of falls. Although low-frequency stimulation (LFS) has been suggested as a method to improve gait characteristics, the underlying structural network is not well understood.

Objective

This study aims to investigate the structural correlates of changes in stride length during LFS (85 Hz).

Methods

Objective gait performance was retrospectively evaluated in 19 PD patients who underwent deep brain stimulation (DBS) at 85 Hz and 130 Hz. Individual DBS contacts and volumes of activated tissue (VAT) were computed using preoperative magnetic resonance imaging (MRI) and postoperative computed tomography (CT) scans. Structural connectivity profiles to predetermined cortical and mesencephalic areas were estimated using a normative connectome.

Results

LFS led to a significant improvement in stride length compared to 130 Hz stimulation. The intersection between VAT and the associative subregion of the subthalamic nucleus (STN) was associated with an improvement in stride length and had structural connections to the supplementary motor area, prefrontal cortex, and pedunculopontine nucleus. Conversely, we found that a lack of improvement was linked to stimulation volumes connected to cortico-diencephalic fibers bypassing the STN dorsolaterally. The robustness of the connectivity model was verified through leave-one-patient-out, 5-, and 10-fold cross cross-validation paradigms.

Conclusion

These findings offer new insights into the structural connectivity that underlies gait changes following LFS. Targeting the non-motor subregion of the STN with LFS on an individual level may present a potential therapeutic approach for PD patients with gait disorders.

步长缩短被认为是帕金森病(PD)步态运动学的一个关键特征,并被认为是跌倒的一个预测因素。虽然低频刺激(LFS)被认为是改善步态特征的一种方法,但其潜在的结构网络还不十分清楚。本研究旨在探讨低频刺激(85 Hz)时步长变化的结构相关性。对19名接受过85赫兹和130赫兹脑深部刺激(DBS)的帕金森病患者的客观步态表现进行了回顾性评估。使用术前磁共振成像(MRI)和术后计算机断层扫描(CT)计算了单个 DBS 接触点和激活组织体积(VAT)。使用标准连接组估算了与预定皮质和间脑区域的结构连接情况。与 130 Hz 刺激相比,LFS 能显著改善步长。VAT与丘脑下核(STN)联想亚区之间的交叉点与步长的改善有关,并与辅助运动区、前额叶皮层和足底核有结构连接。相反,我们发现缺乏改善与绕过 STN 的背侧皮质-间脑纤维的刺激量有关。连通性模型的稳健性通过 "排除一个病人"、5 倍和 10 倍交叉验证范式得到了验证。这些发现为研究 LFS 后步态变化的结构连通性提供了新的视角。在个体水平上以 LFS 靶向 STN 的非运动亚区,可能会为步态障碍的帕金森病患者提供一种潜在的治疗方法。
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引用次数: 0
Full kinetic modeling analysis of [18F]fluorocholine Positron Emission Tomography (PET) at initial diagnosis of high-grade glioma 初步诊断高级别胶质瘤时[18F]氟胆碱正电子发射断层扫描(PET)的全动力学模型分析
IF 4.2 2区 医学 Q1 Medicine Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103616
Sebastià Rubí , Pedro Bibilioni , Marina Villar , Marta Brell , Manuel Valiente , Margalida Galmés , María Toscano , Gabriel Matheu , José Luis Chinchilla , Jesús Molina , José Luis Valera , Ángel Ríos , Meritxell López , Cristina Peña

Purpose

The main objective was to characterize the tracer uptake kinetics of [18F]fluoromethylcholine ([18F]F-CHO) in high-grade gliomas (HGG) through a full PET kinetic modeling approach. Secondarily, we aimed to explore the relationship between the PET uptake measures and the HGG molecular features.

Materials and methods

Twenty-four patients with a suspected diagnosis of HGG were prospectively included. They underwent a dynamic brain [18F]F-CHO-PET/CT, from which a tumoral time-activity curve was extracted. The plasma input function was obtained through arterial blood sampling with metabolite correction. These data were fitted to 1- and 2-tissue-compartment models, the best of which was selected through the Akaike information criterion. We assessed the correlation between the kinetic parameters and the conventional static PET metrics (SUVmax, SUVmean and tumor-to-background ratio TBR). We explored the association between the [18F]F-CHO-PET quantitative parameters and relevant molecular biomarkers in HGG.

Results

Tumoral time-activity curves in all patients showed a rapid rise of [18F]F-CHO uptake followed by a plateau-like shape. Best fits were obtained with near-irreversible 2-tissue-compartment models. The perfusion-transport constant K1 and the net influx rate Ki showed strong correlation with SUVmax (r = 0.808–0.861), SUVmean (r = 0.794–0.851) and TBR (r = 0.643–0.784), p < 0.002. HGG was confirmed in 21 patients, of which those with methylation of the O-6-methylguanine-DNA methyltransferase (MGMT) gene promoter showed higher mean Ki (p = 0.020), K1 (p = 0.025) and TBR (p = 0.001) than the unmethylated ones.

Conclusion

[18F]F-CHO uptake kinetics in HGG is best explained by a 2-tissue-compartment model. The conventional static [18F]F-CHO-PET measures have been validated against the perfusion-transport constant (K1) and the net influx rate (Ki) derived from kinetic modeling. A relationship between [18F]F-CHO uptake rate and MGMT methylation is suggested but needs further confirmation.

目的主要目的是通过全 PET 动力学建模方法描述高级别胶质瘤(HGG)对[18F]氟甲基胆碱([18F]F-CHO)示踪剂的摄取动力学。材料与方法前瞻性地纳入了 24 例疑似诊断为 HGG 的患者。他们接受了动态脑[18F]F-CHO-PET/CT检查,并从中提取了肿瘤时间活动曲线。血浆输入函数通过动脉血采样和代谢物校正获得。这些数据被拟合到 1-组织间室模型和 2-组织间室模型中,并通过 Akaike 信息准则选出了最佳模型。我们评估了动力学参数与传统静态 PET 指标(SUVmax、SUVmean 和肿瘤与背景比值 TBR)之间的相关性。我们探讨了[18F]F-CHO-PET 定量参数与 HGG 中相关分子生物标记物之间的关联。结果所有患者的肿瘤时间-活动曲线均显示[18F]F-CHO 摄取量快速上升,随后呈高原状。近乎不可逆的 2 组织间室模型获得了最佳拟合。灌注-转运常数 K1 和净流入率 Ki 与 SUVmax(r = 0.808-0.861)、SUVmean(r = 0.794-0.851)和 TBR(r = 0.643-0.784)有很强的相关性,p < 0.002。21例患者确诊为HGG,其中O-6-甲基鸟嘌呤-DNA甲基转移酶(MGMT)基因启动子甲基化患者的平均Ki(p = 0.020)、K1(p = 0.025)和TBR(p = 0.001)均高于未甲基化患者。传统的静态[18F]F-CHO-PET测量方法已与动力学模型得出的灌注-传输常数(K1)和净流入率(Ki)进行了验证。表明[18F]F-CHO 摄取率与 MGMT 甲基化之间存在关系,但还需要进一步确认。
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引用次数: 0
Joint multi-site domain adaptation and multi-modality feature selection for the diagnosis of psychiatric disorders 联合多站点领域适应和多模态特征选择,用于诊断精神疾病。
IF 3.4 2区 医学 Q2 NEUROIMAGING Pub Date : 2024-01-01 DOI: 10.1016/j.nicl.2024.103663

Identifying biomarkers for computer-aided diagnosis (CAD) is crucial for early intervention of psychiatric disorders. Multi-site data have been utilized to increase the sample size and improve statistical power, while multi-modality classification offers significant advantages over traditional single-modality based approaches for diagnosing psychiatric disorders. However, inter-site heterogeneity and intra-modality heterogeneity present challenges to multi-site and multi-modality based classification. In this paper, brain functional and structural networks (BFNs/BSNs) from multiple sites were constructed to establish a joint multi-site multi-modality framework for psychiatric diagnosis. To do this we developed a hypergraph based multi-source domain adaptation (HMSDA) which allowed us to transform source domain subjects into a target domain. A local ordinal structure based multi-task feature selection (LOSMFS) approach was developed by integrating the transformed functional and structural connections (FCs/SCs). The effectiveness of our method was validated by evaluating diagnosis of both schizophrenia (SZ) and autism spectrum disorder (ASD). The proposed method obtained accuracies of 92.2 %±2.22 % and 84.8 %±2.68 % for the diagnosis of SZ and ASD, respectively. We also compared with 6 DA, 10 multi-modality feature selection, and 8 multi-site and multi-modality methods. Results showed the proposed HMSDA+LOSMFS effectively integrated multi-site and multi-modality data to enhance psychiatric diagnosis and identify disorder-specific diagnostic brain connections.

为计算机辅助诊断(CAD)确定生物标志物对于早期干预精神疾病至关重要。与传统的基于单一模态的精神疾病诊断方法相比,多模态分类具有显著优势。然而,部位间异质性和模态内异质性给基于多部位和多模态的分类带来了挑战。在本文中,我们构建了来自多个部位的大脑功能和结构网络(BFNs/BSNs),以建立一个用于精神疾病诊断的多部位多模态联合框架。为此,我们开发了基于超图的多源域适配(HMSDA),它允许我们将源域受试者转换为目标域。通过整合转换后的功能和结构连接(FCs/SCs),我们开发了一种基于局部顺序结构的多任务特征选择(LOSMFS)方法。通过评估精神分裂症(SZ)和自闭症谱系障碍(ASD)的诊断,验证了我们方法的有效性。所提出的方法对 SZ 和 ASD 的诊断准确率分别为 92.2 %±2.22 % 和 84.8 %±2.68 %。我们还将该方法与 6 种 DA 方法、10 种多模态特征选择方法以及 8 种多站点和多模态方法进行了比较。结果表明,所提出的HMSDA+LOSMFS有效地整合了多站点和多模态数据,从而提高了精神疾病的诊断水平,并识别了特定疾病诊断的脑连接。
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引用次数: 0
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