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Inhibition of VEGF-A expression in hypoxia-exposed fetal retinal microvascular endothelial cells by exosomes derived from human umbilical cord mesenchymal stem cells 来自人脐带间充质干细胞的外泌体抑制缺氧暴露的胎儿视网膜微血管内皮细胞中VEGF-A的表达
4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.044177
JING LI, WANWAN FAN, LILI HAO, YONGSHENG LI, GUOCHENG YU, WEI SUN, XIANQIONG LUO, JINGXIANG ZHONG
: Objective: This study aimed to investigate the potential of human umbilical cord mesenchymal stem cell (hucMSC)-derived exosomes (hucMSC-Exos) in inhibiting hypoxia-induced cell hyper proliferation and overexpression of vascular endothelial growth factor A (VEGF-A) in immature human fetal retinal microvascular endothelial cells (hfRMECs). Methods: Exosomes were isolated from hucMSCs using cryogenic ultracentrifugation and characterized through various techniques, including transmission electron microscopy, nanoparticle tracking analysis, bicinchoninic acid assays, and western blotting. The hfRMECs were identi fi ed using von Willebrand factor (vWF) co-staining and divided into four groups: a control group cultured under normoxic condition, a hypoxic model group, a hypoxic group treated with low-concentration hucMSC-Exos (75 μ g/mL) and a hypoxic group treated with high-concentration hucMSC-Exos (100 μ g/mL). Cell viability and proliferation were assessed using Cell Counting Kit-8 (CCK-8) assay and EdU (5-ethynyl-2 ′ -deoxyuridine) assay respectively. Expression levels of VEGF-A were evaluated using RT-PCR, western blotting and immuno fl uorescence. Results: Hypoxia signi fi cantly increased hfRMECs ’ viability and proliferation by upregulating VEGF-A levels. The administration of hucMSC-Exos effectively reversed this response, with the high-concentration group exhibiting greater ef fi cacy compared to the low-concentration group. Conclusion: In conclusion, hucMSC-Exos can dose-dependently inhibit hypoxia-induced hyperproliferation and VEGF-A overexpression in immature fetal retinal microvascular endothelial cells.
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引用次数: 0
PSTCNN: Explainable COVID-19 diagnosis using PSO-guided self-tuning CNN. PSTCNN:使用 PSO 引导的自调整 CNN 进行可解释的 COVID-19 诊断。
IF 0.8 4区 生物学 Q4 BIOLOGY Pub Date : 2023-01-01 Epub Date: 2022-11-18 DOI: 10.32604/biocell.2021.0xxx
Wei Wang, Yanrong Pei, Shui-Hua Wang, Juan Manuel Gorrz, Yu-Dong Zhang

Since 2019, the coronavirus disease-19 (COVID-19) has been spreading rapidly worldwide, posing an unignorable threat to the global economy and human health. It is a disease caused by severe acute respiratory syndrome coronavirus 2, a single-stranded RNA virus of the genus Betacoronavirus. This virus is highly infectious and relies on its angiotensin-converting enzyme 2-receptor to enter cells. With the increase in the number of confirmed COVID-19 diagnoses, the difficulty of diagnosis due to the lack of global healthcare resources becomes increasingly apparent. Deep learning-based computer-aided diagnosis models with high generalisability can effectively alleviate this pressure. Hyperparameter tuning is essential in training such models and significantly impacts their final performance and training speed. However, traditional hyperparameter tuning methods are usually time-consuming and unstable. To solve this issue, we introduce Particle Swarm Optimisation to build a PSO-guided Self-Tuning Convolution Neural Network (PSTCNN), allowing the model to tune hyperparameters automatically. Therefore, the proposed approach can reduce human involvement. Also, the optimisation algorithm can select the combination of hyperparameters in a targeted manner, thus stably achieving a solution closer to the global optimum. Experimentally, the PSTCNN can obtain quite excellent results, with a sensitivity of 93.65%±1.86%, a specificity of 94.32%±2.07%, a precision of 94.30%±2.04%, an accuracy of 93.99%±1.78%, an F1-score of 93.97%±1.78%, Matthews Correlation Coefficient of 87.99%±3.56%, and Fowlkes-Mallows Index of 93.97%±1.78%. Our experiments demonstrate that compared to traditional methods, hyperparameter tuning of the model using an optimisation algorithm is faster and more effective.

自2019年以来,冠状病毒病-19(COVID-19)在全球范围内迅速蔓延,对全球经济和人类健康构成了不可忽视的威胁。它是由严重急性呼吸道综合征冠状病毒2引起的疾病,是一种Betacoronavirus属单链RNA病毒。这种病毒具有高度传染性,依靠血管紧张素转换酶 2 受体进入细胞。随着 COVID-19 确诊病例的增加,全球医疗资源匮乏导致的诊断困难日益凸显。基于深度学习的计算机辅助诊断模型具有高泛化能力,可以有效缓解这一压力。在训练此类模型时,超参数调整至关重要,会对其最终性能和训练速度产生重大影响。然而,传统的超参数调整方法通常耗时且不稳定。为了解决这个问题,我们引入了粒子群优化技术,建立了一个 PSO 引导的自调整卷积神经网络(PSTCNN),允许模型自动调整超参数。因此,建议的方法可以减少人工参与。同时,优化算法可以有针对性地选择超参数组合,从而稳定地获得更接近全局最优的解决方案。实验结果表明,PSTCNN 的灵敏度为 93.65%±1.86%,特异度为 94.32%±2.07%,精确度为 94.30%±2.04%,准确度为 93.99%±1.78%,F1 分数为 93.97%±1.78%,Matthews 相关系数为 87.99%±3.56%,Fowlkes-Mallows 指数为 93.97%±1.78%。我们的实验证明,与传统方法相比,使用优化算法对模型进行超参数调整更快、更有效。
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引用次数: 0
Comprehensive bioinformatics analysis of CYB561 expression in breast cancer: Link between prognosis and immune infiltration 乳腺癌CYB561表达的综合生物信息学分析:预后与免疫浸润的关系
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.027103
Xi Yang, Huixian Wu, Chao-Liang Xiong, Bo Zhao, Meilian Liu, J. Qin, Meihai Deng
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引用次数: 0
Effects of Tsukamurella tyrosinosolvens P9 on growth, physiology and antioxdant enzyme of peanut under drought stress and after re-watering 旱胁迫及复水处理对花生生长、生理及抗氧化酶的影响
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.027485
Changmei Long, Tingting Yang, Yujie Han, Lizhen Han
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引用次数: 0
TianmaGouteng yin attenuates ischemic stroke-induced brain injury by inhibiting the AGE/RAGE pathway 天麻骨藤饮通过抑制AGE/RAGE通路减轻缺血性脑损伤
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.028866
Luojun Zheng, Luan Weng, Diwen Shou
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引用次数: 0
Junctional adhesion molecule-A (JAM-A) in gynecological cancers: Current state of knowledge 连接粘附分子- a (JAM-A)在妇科癌症中的作用:目前的研究现状
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.025677
Kamila Czubak-Prowizor, M. Swiatkowska
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引用次数: 0
The effects of hormone-mediated PI3K/AKT signaling on spermatogenesis in Sertoli cells 激素介导的PI3K/AKT信号在支持细胞精子发生中的作用
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.030379
Yanshuang Zhao, Wanxiu Yang
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引用次数: 0
Hyperglycemia-induced myocardial fibrosis may be associated with pyroptosis and apoptosis of cardiomyoctes in diabetic mice 高血糖诱导的心肌纤维化可能与糖尿病小鼠心肌细胞的焦亡和凋亡有关
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.024944
Yao Lu, Qiuyue Wang, Caihui Zhang
Myocardial fibrosis is an important manifestation of diabetic cardiomyopathy. This study investigated the potential mechanism of diabetic myocardial fibrosis. Male C57BL/6J and db/db mice aged 8 weeks were randomly divided into the diabetic (DB) and control groups. At 20 weeks, the mouse heart was harvested and subjected to hematoxylin-eosin staining (HE) and Masson staining to investigate the degree of fibrosis. The expressions of transforming growth factor-beta 1 (TGF-β1), collagen-III, B-cell lymphoma-2 (Bcl2), Bcl2-associated X protein (Bax), cleaved gasdermin D (GSDMD), cysteinyl aspartate specific proteinase-1 (caspase-1), apoptosis-associated speck-like protein containing a CARD (ASC), and nucleotide-binding oligomerization domain (NOD)-like receptor 3 (NLRP3) were measured by western blotting. Immunohistochemistry and TdT-mediated dUTP nick end labeling (TUNEL) staining were performed to analyze the development of apoptosis and pyroptosis. A significant increase in body weight and blood glucose in the DB group was observed. Myocardial pathological injury, fibrosis, apoptosis, and pyroptosis were more obvious and serious in the DB group. The expression of anti-apoptotic Bcl2 significantly decreased, while the expression levels of pro-apoptotic Bax, caspase-3, and pyroptosis-related proteins, such as cleaved GSDMD, and caspase-1 in the DB group were significantly increased. Pyroptosis and apoptosis were probably the main mechanisms that caused myocardial fibrosis in mice with diabetes.
心肌纤维化是糖尿病性心肌病的重要表现。本研究探讨糖尿病心肌纤维化的潜在机制。8周龄雄性C57BL/6J和db/db小鼠随机分为糖尿病(db)组和对照组。20周时,采集小鼠心脏,进行苏木精-伊红染色(HE)和Masson染色,观察纤维化程度。western blotting检测转化生长因子-β1 (TGF-β1)、胶原- iii、b细胞淋巴瘤-2 (Bcl2)、Bcl2相关X蛋白(Bax)、裂解气皮蛋白D (GSDMD)、半胱氨酸天冬氨酸特异性蛋白酶-1 (caspase-1)、凋亡相关含CARD斑点样蛋白(ASC)、核苷酸结合寡聚结构域(NOD)样受体3 (NLRP3)的表达。采用免疫组织化学和tdt介导的dUTP缺口末端标记(TUNEL)染色分析细胞凋亡和焦亡的发生。观察到DB组体重和血糖显著增加。DB组心肌病理损伤、纤维化、凋亡、焦亡更为明显和严重。DB组抗凋亡Bcl2表达显著降低,促凋亡Bax、caspase-3及裂解型GSDMD、caspase-1等凋亡相关蛋白表达水平显著升高。焦亡和细胞凋亡可能是引起糖尿病小鼠心肌纤维化的主要机制。
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引用次数: 0
Abstracts from XXIV Annual Meeting of the Argentinean Society of Biology (SAB) 阿根廷生物学会(SAB)第24届年会摘要
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.s0124
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引用次数: 0
Control of tendon cell fate in the embryonic limb: A molecular perspective 胚胎肢体肌腱细胞命运的控制:分子视角
IF 1.2 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.32604/biocell.2023.024625
Jessica CRISTINA MAR蚇-LLERA, Carlos AMAURY JIM蒒EZ-C罵DENAS, JES赟 CHIMAL-MONROY
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引用次数: 0
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