Pub Date : 2025-10-01Epub Date: 2025-12-09DOI: 10.1177/00368504251406566
Shao-Lun Lee, Mei-Hua Hsu, Yi-Fan Wang, Max Yue-Feng Wang
ObjectiveThis study develops a predictive model to help fire departments improve resource allocation by estimating the likelihood of fire escalation.MethodsWe analyzed 47,382 fire incidents from a city in Taiwan, applying an XGBoost model trained on building characteristics, temporal factors, and geographic information system-derived spatial features. The model was validated using 5-fold cross-validation, temporal holdouts, and geographic tests.ResultsThe model achieved 85.6% accuracy and an AUC of 0.83. Fires were more likely to escalate in older buildings, at night, and on weekends, with building structure, use, and number of floors identified as the strongest predictors. A retrospective simulation suggested that model-informed dispatch could reduce property damage by 25%, firefighter injuries by 21%, and response times by 18%.ImplicationsThese findings demonstrate the potential of predictive analytics to enhance real-time firefighting efficiency and public safety. While promising, the framework requires validation in other cities and with more granular severity scales to ensure broader applicability.
{"title":"Machine learning-based forecasting of urban fire impact in city environments.","authors":"Shao-Lun Lee, Mei-Hua Hsu, Yi-Fan Wang, Max Yue-Feng Wang","doi":"10.1177/00368504251406566","DOIUrl":"10.1177/00368504251406566","url":null,"abstract":"<p><p>ObjectiveThis study develops a predictive model to help fire departments improve resource allocation by estimating the likelihood of fire escalation.MethodsWe analyzed 47,382 fire incidents from a city in Taiwan, applying an XGBoost model trained on building characteristics, temporal factors, and geographic information system-derived spatial features. The model was validated using 5-fold cross-validation, temporal holdouts, and geographic tests.ResultsThe model achieved 85.6% accuracy and an AUC of 0.83. Fires were more likely to escalate in older buildings, at night, and on weekends, with building structure, use, and number of floors identified as the strongest predictors. A retrospective simulation suggested that model-informed dispatch could reduce property damage by 25%, firefighter injuries by 21%, and response times by 18%.ImplicationsThese findings demonstrate the potential of predictive analytics to enhance real-time firefighting efficiency and public safety. While promising, the framework requires validation in other cities and with more granular severity scales to ensure broader applicability.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251406566"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12690061/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145710469","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-01Epub Date: 2025-11-28DOI: 10.1177/00368504251398881
Dmitry A Sychev, Anastasiia A Buianova, Sherzod P Abdullaev, Karin B Mirzaev, Vera A Belova, Anna O Shmitko, Valery V Cheranev, Oleg N Suchalko, Lyudmila V Fedina, Svetlana V Batyukina, Natalia A Shatalova, Pavel O Bochkov, Sergey V Glagolev, Denis V Rebrikov, Dmitriy O Korostin
BackgroundDirect oral anticoagulants (DOACs) are first-line medications for stroke prevention in non-valvular atrial fibrillation (AF). However, variability in drug response poses risks of hemorrhagic or thromboembolic events.ObjectivesAlthough genetic influences on DOACs safety are increasingly recognized, robust evidence directly linking specific polymorphisms to bleeding risk remains limited.DesignMulti-center observational case-control study including exome-wide association analysis of 196 non-valvular AF patients treated with rivaroxaban or apixaban, comprising 97 with bleeding complications and 99 without.MethodsDOAC plasma concentrations, urinary 6-β-hydroxycortisol and cortisol levels were measured for CYP3A4 phenotyping. Sequencing was performed on the DNBSEQ G-400 platform. Single-nucleotide variant (SNV) associations with bleeding risk were assessed using logistic regression with additive, dominant, and recessive genetic models. Polygenic risk scores (PRSs) were calculated to evaluate cumulative genetic effects.ResultsNo SNVs reached Bonferroni-corrected significance under any model. PRSs showed weak predictive ability for bleeding with apixaban. For rivaroxaban, regression indicated that ln Css min/D + 1 index increased with PRS, age, and 6-β-hydroxycortisol/cortisol ratio, but decreased with higher 6-β-hydroxycortisol and coronary heart disease presence. No statistically significant differences were found for the PharmGKB Level 3 variants rs1045642 (rivaroxaban) and rs2231142 (apixaban). Trends toward statistical significance were observed for the rs2472304-G variant in rivaroxaban users, rs6977165-C in apixaban users, and for the CYP3A4*1/*36 diplotype.ConclusionResidual equilibrium concentration of DOACs, including dose-adjusted, did not independently predict bleeding risk in non-valvular AF patients. Variants rs2472304 and rs6977165 may warrant further investigation as potential contributors to bleeding risk.
{"title":"Exome-wide association study of bleeding events in patients receiving direct oral anticoagulants.","authors":"Dmitry A Sychev, Anastasiia A Buianova, Sherzod P Abdullaev, Karin B Mirzaev, Vera A Belova, Anna O Shmitko, Valery V Cheranev, Oleg N Suchalko, Lyudmila V Fedina, Svetlana V Batyukina, Natalia A Shatalova, Pavel O Bochkov, Sergey V Glagolev, Denis V Rebrikov, Dmitriy O Korostin","doi":"10.1177/00368504251398881","DOIUrl":"10.1177/00368504251398881","url":null,"abstract":"<p><p>BackgroundDirect oral anticoagulants (DOACs) are first-line medications for stroke prevention in non-valvular atrial fibrillation (AF). However, variability in drug response poses risks of hemorrhagic or thromboembolic events.ObjectivesAlthough genetic influences on DOACs safety are increasingly recognized, robust evidence directly linking specific polymorphisms to bleeding risk remains limited.DesignMulti-center observational case-control study including exome-wide association analysis of 196 non-valvular AF patients treated with rivaroxaban or apixaban, comprising 97 with bleeding complications and 99 without.MethodsDOAC plasma concentrations, urinary 6-β-hydroxycortisol and cortisol levels were measured for CYP3A4 phenotyping. Sequencing was performed on the DNBSEQ G-400 platform. Single-nucleotide variant (SNV) associations with bleeding risk were assessed using logistic regression with additive, dominant, and recessive genetic models. Polygenic risk scores (PRSs) were calculated to evaluate cumulative genetic effects.ResultsNo SNVs reached Bonferroni-corrected significance under any model. PRSs showed weak predictive ability for bleeding with apixaban. For rivaroxaban, regression indicated that ln C<sub>ss min</sub>/D + 1 index increased with PRS, age, and 6-β-hydroxycortisol/cortisol ratio, but decreased with higher 6-β-hydroxycortisol and coronary heart disease presence. No statistically significant differences were found for the PharmGKB Level 3 variants rs1045642 (rivaroxaban) and rs2231142 (apixaban). Trends toward statistical significance were observed for the rs2472304-G variant in rivaroxaban users, rs6977165-C in apixaban users, and for the <i>CYP3A4*1/*36</i> diplotype.ConclusionResidual equilibrium concentration of DOACs, including dose-adjusted, did not independently predict bleeding risk in non-valvular AF patients. Variants rs2472304 and rs6977165 may warrant further investigation as potential contributors to bleeding risk.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251398881"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12663078/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145643261","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ObjectiveInflammatory markers, such as the neutrophil-to-lymphocyte Ratio (NLR), systemic immune-inflammation index (SII), systemic inflammation response index (SIRI), and panimmune-inflammatory value (PIV), have previously been identified as prognostic factors in head and neck cancer (HNC). Notably, time-dependent receiver operating characteristic (ROC) curves have rarely been used to assess the prognostic role of inflammatory markers in head and neck cancer. This study aimed to evaluate the significance of the NLR, SII, SIRI, and PIV in this context.MethodsThis retrospective cohort study was conducted at Far Eastern Memorial Hospital, a tertiary medical center between July 2022 and January 2025, and 153 patients with HNC were enrolled in this study. Inflammatory markers were compared by tumor status, nodal involvement, and stage. Time-dependent ROC analysis was used to determine the area under the curve (AUC) and optimal cutoff values for overall survival (OS) and disease-specific survival (DSS) with Cox regression.ResultsThe NLR, SII, SIRI, and PIV were significantly associated with tumor status and stage (p < 0.05). The optimal cutoff values were 2.9, 630, 1.6, and 400, with corresponding time-dependent AUCs of 0.73, 0.71, 0.64, and 0.62, with corresponding sensitivities of 81.7%, 81.2%, 55.9%, and 60.8%, and specificities of 64.1%, 54.9%, 68.5%, and 60.4%., respectively. Higher NLR, SII, SIRI, and PIV values were associated with poor OS and DSS.ConclusionsThe NLR, SII, SIRI, and PIV are associated with tumor status and poor survival outcomes (OS and DSS) and may provide additional stratification and risk-based management in patients with HNC.
{"title":"Prognostic significance of the neutrophil-to-lymphocyte ratio (NLR), systemic immune-inflammation index (SII), systemic inflammation response index (SIRI) and panimmune-inflammation value (PIV) in head and neck squamous cell carcinoma (HNSCC): A retrospective cohort study.","authors":"Ping-Yi Lin, Yu-Hsin Lin, Ming-Hsun Wen, Ping-Chia Cheng, Po-Hsuan Wu, Wu-Chia Lo, Chih-Ming Chang, Li-Jen Liao","doi":"10.1177/00368504251408872","DOIUrl":"10.1177/00368504251408872","url":null,"abstract":"<p><p>ObjectiveInflammatory markers, such as the neutrophil-to-lymphocyte Ratio (NLR), systemic immune-inflammation index (SII), systemic inflammation response index (SIRI), and panimmune-inflammatory value (PIV), have previously been identified as prognostic factors in head and neck cancer (HNC). Notably, time-dependent receiver operating characteristic (ROC) curves have rarely been used to assess the prognostic role of inflammatory markers in head and neck cancer. This study aimed to evaluate the significance of the NLR, SII, SIRI, and PIV in this context.MethodsThis retrospective cohort study was conducted at Far Eastern Memorial Hospital, a tertiary medical center between July 2022 and January 2025, and 153 patients with HNC were enrolled in this study. Inflammatory markers were compared by tumor status, nodal involvement, and stage. Time-dependent ROC analysis was used to determine the area under the curve (AUC) and optimal cutoff values for overall survival (OS) and disease-specific survival (DSS) with Cox regression.ResultsThe NLR, SII, SIRI, and PIV were significantly associated with tumor status and stage (p < 0.05). The optimal cutoff values were 2.9, 630, 1.6, and 400, with corresponding time-dependent AUCs of 0.73, 0.71, 0.64, and 0.62, with corresponding sensitivities of 81.7%, 81.2%, 55.9%, and 60.8%, and specificities of 64.1%, 54.9%, 68.5%, and 60.4%., respectively. Higher NLR, SII, SIRI, and PIV values were associated with poor OS and DSS.ConclusionsThe NLR, SII, SIRI, and PIV are associated with tumor status and poor survival outcomes (OS and DSS) and may provide additional stratification and risk-based management in patients with HNC.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251408872"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12715109/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145776529","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-01Epub Date: 2025-10-21DOI: 10.1177/00368504251375876
Shaohua Guo, Sutao Hu, Hui Chen, Kang-Yin Chen
Objective: Emerging evidence suggests a potential link between cholesterol metabolism and bleeding. We aimed to examine the causal effect of low-density lipoprotein cholesterol (LDL-C) or lipid-lowering drugs on bleeding outcomes. Methods: Two-sample Mendelian randomization (MR) analyses and two types of drug target MR were conducted to evaluate the associations of LDL-C levels with risks for three bleeding outcomes including intracerebral hemorrhage (ICH), gastrointestinal bleeding (GIBleeding), and hemorrhage from respiratory passages (HRP). Furthermore, the association between LDL-C and bleeding outcomes was re-evaluated in a retrospective cohort study involving patients with coronary artery disease (CAD). Results: MR analyses suggest that LDL-C levels are not associated with bleeding outcomes, including ICH, GIbleeding, and HRP. SMR also found no causal relationship between the use of lipid-lowering drugs (HMGCR inhibitors, PCSK9 inhibitors, and NPC1L1 inhibitor) and bleeding outcomes (ICH, GIbleeding, and HRP). Alleles at or near the HMGCR gene (mimicking the effect of statins) reducing LDL-C level expression levels are intended to elevate the risk of ICH (odds ratio (OR) 1.0018, 95% confidence interval (CI) 1.0001-1.0035, P = 0.043), independent of their lipid-lowering effect. In the CAD cohort with a 2-year follow up, LDL-C levels measured within the last 3 months of follow up were significantly associated with an increased risk of BARC criteria 3 to 5 grade bleeding (P < 0.001) and showed a trend toward an increased risk of ICH (P = 0.051). Conclusions: These findings suggest a potential causal relationship between LDL-C levels and bleeding outcomes, particularly in patients using HMGCR inhibitors.
目的:越来越多的证据表明胆固醇代谢与出血之间存在潜在联系。我们的目的是检查低密度脂蛋白胆固醇(LDL-C)或降脂药物对出血结局的因果关系。方法:采用双样本孟德尔随机化(MR)分析和两种药物靶MR,评估LDL-C水平与脑出血(ICH)、胃肠道出血(GIBleeding)和呼吸道出血(HRP)三种出血结局风险的关系。此外,在一项涉及冠状动脉疾病(CAD)患者的回顾性队列研究中,LDL-C与出血结局之间的关系被重新评估。结果:MR分析表明LDL-C水平与出血结局无关,包括脑出血、胃肠道出血和HRP。SMR还发现,使用降脂药物(HMGCR抑制剂、PCSK9抑制剂和NPC1L1抑制剂)和出血结局(ICH、gi出血和HRP)之间没有因果关系。HMGCR基因或其附近的等位基因(模仿他汀类药物的作用)降低LDL-C水平表达水平,旨在提高ICH的风险(优势比(or) 1.0018, 95%置信区间(CI) 1.0001-1.0035, P = 0.043),与降脂作用无关。在随访2年的CAD队列中,在随访的最后3个月内测量的LDL-C水平与BARC标准3至5级出血的风险增加显著相关(P)结论:这些发现表明LDL-C水平与出血结局之间存在潜在的因果关系,特别是在使用HMGCR抑制剂的患者中。
{"title":"Lipid, lipid-lowering drugs, and bleedings: A Mendelian randomization and retrospective study.","authors":"Shaohua Guo, Sutao Hu, Hui Chen, Kang-Yin Chen","doi":"10.1177/00368504251375876","DOIUrl":"10.1177/00368504251375876","url":null,"abstract":"<p><p><b>Objective:</b> Emerging evidence suggests a potential link between cholesterol metabolism and bleeding. We aimed to examine the causal effect of low-density lipoprotein cholesterol (LDL-C) or lipid-lowering drugs on bleeding outcomes. <b>Methods:</b> Two-sample Mendelian randomization (MR) analyses and two types of drug target MR were conducted to evaluate the associations of LDL-C levels with risks for three bleeding outcomes including intracerebral hemorrhage (ICH), gastrointestinal bleeding (GIBleeding), and hemorrhage from respiratory passages (HRP). Furthermore, the association between LDL-C and bleeding outcomes was re-evaluated in a retrospective cohort study involving patients with coronary artery disease (CAD). <b>Results:</b> MR analyses suggest that LDL-C levels are not associated with bleeding outcomes, including ICH, GIbleeding, and HRP. SMR also found no causal relationship between the use of lipid-lowering drugs (HMGCR inhibitors, PCSK9 inhibitors, and NPC1L1 inhibitor) and bleeding outcomes (ICH, GIbleeding, and HRP). Alleles at or near the HMGCR gene (mimicking the effect of statins) reducing LDL-C level expression levels are intended to elevate the risk of ICH (odds ratio (OR) 1.0018, 95% confidence interval (CI) 1.0001-1.0035, P = 0.043), independent of their lipid-lowering effect. In the CAD cohort with a 2-year follow up, LDL-C levels measured within the last 3 months of follow up were significantly associated with an increased risk of BARC criteria 3 to 5 grade bleeding (P < 0.001) and showed a trend toward an increased risk of ICH (P = 0.051). <b>Conclusions:</b> These findings suggest a potential causal relationship between LDL-C levels and bleeding outcomes, particularly in patients using HMGCR inhibitors.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251375876"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12553848/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145338323","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-01DOI: 10.1177/00368504251382003
Alaa M Al-Ma'abreh, Ethar M Al-Essa, Dareen A Hmedat, Gada Edris, Fida' F Odeh, Mariam Hamed
This work utilized Casuarina equisetifolia fruit-based activated carbon (CEAC) to investigate the simultaneous removal of paracetamol (PA), caffeine (CAF), and acetylsalicylic acid (AS) from aqueous solutions. The efficacy of adsorbent removal was investigated using adsorption factors such as pH, CEAC amount, initial pharmaceutical concentration, and adsorption period. Fourier-transform infrared spectroscopy, scanning electron microscopy, and UV-visible analysis confirmed the simultaneous adsorption of the pharmaceutical mixture onto the CEAC surface. The results showed a slight effect of pH on the simultaneous adsorption efficiencies with a CEAC dose of 110 mg. The ideal initial concentration for the pharmaceutical mixture was determined to be 15 mg L-1. The perfect contact duration for the simultaneous removal of the three pharmaceuticals was found to be 30 min. Kinetic tests demonstrated that the pharmaceutical mixture adsorbs using a pseudo-second-order process. The Freundlich isotherm model describes the equilibrium data. The maximum adsorption capabilities were PA (84.15.23 mg g-1), CAF (79.16 mg g-1), and AS (61.32 mg g-1). A thermodynamic study reveals that these adsorption processes are endothermic and spontaneous. Finally, regeneration experiments confirm the reusability of CEAC.
{"title":"Green remediation: <i>Casuarina equisetifolia</i> fruit-based activated carbon for pharmaceutical removal.","authors":"Alaa M Al-Ma'abreh, Ethar M Al-Essa, Dareen A Hmedat, Gada Edris, Fida' F Odeh, Mariam Hamed","doi":"10.1177/00368504251382003","DOIUrl":"10.1177/00368504251382003","url":null,"abstract":"<p><p>This work utilized <i>Casuarina equisetifolia</i> fruit-based activated carbon (CEAC) to investigate the simultaneous removal of paracetamol (PA), caffeine (CAF), and acetylsalicylic acid (AS) from aqueous solutions. The efficacy of adsorbent removal was investigated using adsorption factors such as pH, CEAC amount, initial pharmaceutical concentration, and adsorption period. Fourier-transform infrared spectroscopy, scanning electron microscopy, and UV-visible analysis confirmed the simultaneous adsorption of the pharmaceutical mixture onto the CEAC surface. The results showed a slight effect of pH on the simultaneous adsorption efficiencies with a CEAC dose of 110 mg. The ideal initial concentration for the pharmaceutical mixture was determined to be 15 mg L<sup>-1</sup>. The perfect contact duration for the simultaneous removal of the three pharmaceuticals was found to be 30 min. Kinetic tests demonstrated that the pharmaceutical mixture adsorbs using a pseudo-second-order process. The Freundlich isotherm model describes the equilibrium data. The maximum adsorption capabilities were PA (84.15.23 mg g<sup>-1</sup>), CAF (79.16 mg g<sup>-1</sup>), and AS (61.32 mg g<sup>-1</sup>). A thermodynamic study reveals that these adsorption processes are endothermic and spontaneous. Finally, regeneration experiments confirm the reusability of CEAC.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251382003"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12489232/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145208505","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ObjectiveThe study investigated the role of the quorum sensing (QS) regulator BpsR4 in the physiology and virulence of Burkholderia pseudomallei strain K96243.MethodsA B. pseudomallei bpsR4 knockout mutant (ΔbpsR4) was constructed, and its gene expression profile was compared with that of the wild-type (WT) K96243 strain using RNA sequencing. In vitro assays were conducted to assess growth rates, stress responses, antibiotic sensitivity, motility, and biofilm formation. Ex vivo pathogenicity was evaluated using a human skin fibroblast infection model, and in vivo virulence was assessed in the Galleria mellonella model.ResultsbpsR4 deletion led to significant transcriptional reprogramming, including the downregulation of genes involved in iron acquisition, sulfur metabolism, oxidative stress response, and redox homeostasis and upregulation of genes linked to motility, chemotaxis, and membrane transport. ΔbpsR4 exhibited reduced tolerance to oxidative and heat stress and impaired biofilm formation but no significant change in motility. Additionally, ΔbpsR4 displayed decreased susceptibility to meropenem. In both in vitro and invertebrate infection models, the mutant demonstrated lower virulence than the WT strain.ConclusionThis study highlighted the involvement of BpsR4 in stress response, antimicrobial susceptibility, and virulence in B. pseudomallei. Targeting QS pathways, particularly BpsR4 signaling, might represent a promising strategy to develop anti-virulence therapies that enhance antibiotic efficacy and improve clinical outcomes in melioidosis.
目的研究群体感应(quorum sensing, QS)调节剂BpsR4在假马勒伯克氏菌K96243的生理和毒力中的作用。方法构建sa B. pseudomallei bpsR4基因敲除突变体(ΔbpsR4),采用RNA测序方法与野生型(WT) K96243进行基因表达谱比较。进行体外试验以评估生长速率、应激反应、抗生素敏感性、运动性和生物膜形成。体外致病性采用人皮肤成纤维细胞感染模型进行评估,体内毒力采用大花廊菌模型进行评估。结果bpsr4缺失导致显著的转录重编程,包括参与铁获取、硫代谢、氧化应激反应和氧化还原稳态的基因下调,以及与运动、趋化性和膜运输相关的基因上调。ΔbpsR4对氧化和热应激的耐受性降低,生物膜形成受损,但运动性没有显著变化。此外,ΔbpsR4对美罗培南的易感性降低。在体外和无脊椎动物感染模型中,突变株的毒力都低于WT菌株。结论BpsR4基因参与假芽孢杆菌的应激反应、药敏和毒力。靶向QS通路,特别是BpsR4信号通路,可能是开发抗毒治疗的一种有希望的策略,可以提高抗生素的疗效,改善类鼻疽的临床结果。
{"title":"Transcriptomic profile of BpsR4 and its roles in stress response, antibiotic susceptibility, biofilm formation, and pathogenesis in <i>Burkholderia pseudomallei</i>.","authors":"Amporn Rungruengkitkun, Phan Khoi Nguyen, Witawat Tunyong, Thida Kong-Ngoen, Sumate Ampawong, Thaniya Sricharunrat, Nitaya Indrawattana, Narisara Chantratita, Pornpan Pumirat","doi":"10.1177/00368504251394544","DOIUrl":"10.1177/00368504251394544","url":null,"abstract":"<p><p>ObjectiveThe study investigated the role of the quorum sensing (QS) regulator BpsR4 in the physiology and virulence of <i>Burkholderia pseudomallei</i> strain K96243.MethodsA <i>B. pseudomallei bpsR4</i> knockout mutant (Δ<i>bpsR4</i>) was constructed, and its gene expression profile was compared with that of the wild-type (WT) K96243 strain using RNA sequencing. <i>In vitro</i> assays were conducted to assess growth rates, stress responses, antibiotic sensitivity, motility, and biofilm formation. <i>Ex vivo</i> pathogenicity was evaluated using a human skin fibroblast infection model, and <i>in vivo</i> virulence was assessed in the <i>Galleria mellonella</i> model.Results<i>bpsR4</i> deletion led to significant transcriptional reprogramming, including the downregulation of genes involved in iron acquisition, sulfur metabolism, oxidative stress response, and redox homeostasis and upregulation of genes linked to motility, chemotaxis, and membrane transport. Δ<i>bpsR4</i> exhibited reduced tolerance to oxidative and heat stress and impaired biofilm formation but no significant change in motility. Additionally, Δ<i>bpsR4</i> displayed decreased susceptibility to meropenem. In both <i>in vitro</i> and invertebrate infection models, the mutant demonstrated lower virulence than the WT strain.ConclusionThis study highlighted the involvement of BpsR4 in stress response, antimicrobial susceptibility, and virulence in <i>B. pseudomallei</i>. Targeting QS pathways, particularly BpsR4 signaling, might represent a promising strategy to develop anti-virulence therapies that enhance antibiotic efficacy and improve clinical outcomes in melioidosis.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251394544"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12663075/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145643209","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
ObjectiveCriteria to differentiate pediatric knee joint effusion remained inexpedient. This study aimed to establish a prediction rule to distinguish infection from other inflammatory arthritis in children presenting with knee pain.MethodsAn ambi-directional cohort was conducted at the university hospital from 1999 to 2021 by including children aged ≤ 15 years with knee pain/swelling, complete physical examination, knee imaging, laboratory, and/or synovial fluid analysis. Contaminated synovial fluid culture and incomplete medical records were excluded. Diagnosis of septic knee (positive joint fluid culture or synovial white blood cell counts > 50,000 cells/mm3) or other inflammatory joints were retrieved. Baseline characteristics, physical examination, and laboratory investigations were analyzed. The probability of septic arthritis was calculated based on numbers of predictors from the final model.ResultsFrom 48 patients (average age 7.0 ± 4.0 years, and 24 (50%) unilateral involvement), the incidence of septic knee was 9 patients (18.8%), and 39 patients with other inflammatory arthritis. Multivariate logistic regression identified three predictors: unable to bear weight, ballottement, and erythrocyte sedimentation rate (ESR) ≥ 75 mm/h (adjusted odds ratio (OR) 36.2, 19.4, and 31.9, respectively, the model chi-square p < 0.0001, with area under receiver operating characteristic curve = 0.9188). Estimated probability of having septic knee according to 1, 2, and 3 predictors was 27.3% (95% confidence interval (CI) 13.3-45.5%), 61.5% (95% CI 31.6-86.1%), and 100% (95% CI 15.8-100%), respectively. The optimal cutoff value from sum of estimated ORs was ≥ 51.29 (at least 2 predictors) with sensitivity 88.89%, specificity 87.18%.ConclusionsThe clinical predictive factors of septic knee in children may be practically determined by unable to bear weight, ballottement, and ESR at least 75 mm/h. The probability of septic knee increases, especially for positive 2-3 factors. Further large studies would benefit for external validating this prediction rule.
{"title":"Clinical predictive factors for septic arthritis of the knee in children: A cohort study.","authors":"Kantapon Khoployklang, Thira Woratanarat, Soamarat Vilaiyuk, Chanika Angsanuntsukh, Patarawan Woratanarat","doi":"10.1177/00368504251407178","DOIUrl":"10.1177/00368504251407178","url":null,"abstract":"<p><p>ObjectiveCriteria to differentiate pediatric knee joint effusion remained inexpedient. This study aimed to establish a prediction rule to distinguish infection from other inflammatory arthritis in children presenting with knee pain.MethodsAn ambi-directional cohort was conducted at the university hospital from 1999 to 2021 by including children aged ≤ 15 years with knee pain/swelling, complete physical examination, knee imaging, laboratory, and/or synovial fluid analysis. Contaminated synovial fluid culture and incomplete medical records were excluded. Diagnosis of septic knee (positive joint fluid culture or synovial white blood cell counts > 50,000 cells/mm<sup>3</sup>) or other inflammatory joints were retrieved. Baseline characteristics, physical examination, and laboratory investigations were analyzed. The probability of septic arthritis was calculated based on numbers of predictors from the final model.ResultsFrom 48 patients (average age 7.0 ± 4.0 years, and 24 (50%) unilateral involvement), the incidence of septic knee was 9 patients (18.8%), and 39 patients with other inflammatory arthritis. Multivariate logistic regression identified three predictors: unable to bear weight, ballottement, and erythrocyte sedimentation rate (ESR) ≥ 75 mm/h (adjusted odds ratio (OR) 36.2, 19.4, and 31.9, respectively, the model chi-square <i>p</i> < 0.0001, with area under receiver operating characteristic curve = 0.9188). Estimated probability of having septic knee according to 1, 2, and 3 predictors was 27.3% (95% confidence interval (CI) 13.3-45.5%), 61.5% (95% CI 31.6-86.1%), and 100% (95% CI 15.8-100%), respectively. The optimal cutoff value from sum of estimated ORs was ≥ 51.29 (at least 2 predictors) with sensitivity 88.89%, specificity 87.18%.ConclusionsThe clinical predictive factors of septic knee in children may be practically determined by unable to bear weight, ballottement, and ESR at least 75 mm/h. The probability of septic knee increases, especially for positive 2-3 factors. Further large studies would benefit for external validating this prediction rule.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251407178"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12722679/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145811984","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-01Epub Date: 2025-12-01DOI: 10.1177/00368504251403216
Hsien-Chie Cheng, Ching-Feng Yu
To address the critical challenge of thermo-mechanical stress in large-area thin-film transistor fan-out panel-level packaging (TFT-FOPLP), this study employs a finite-element modeling to investigate stress distribution from the panel to the device scale. A hierarchical sub-modeling methodology was used, starting with a homogenized global model to identify high-stress regions, followed by two levels of sub-models to resolve stresses in a single TFT cell under simulated thermal cool-down from fabrication temperatures. Results identified the highest stress concentrations at the corners of dies near the panel edge. At the device level, the analysis revealed that the critical gate insulator is subjected to a tensile stress of approximately 44.5 MPa and a strain of about 0.1%, a level sufficient to potentially alter electrical performance. Furthermore, other brittle dielectric layers, such as the passivation layer, were predicted to experience significantly higher stresses (approximately 407 MPa), indicating a primary risk of mechanical fracture. The study affirms the mechanical feasibility of the TFT-FOPLP concept but underscores the need for careful stress mitigation in vulnerable regions. The presented modeling framework provides a powerful tool for design-for-reliability by enabling the early prediction of high-stress zones, thereby reducing reliance on physical prototyping. Future work should focus on correlating these simulations with experimental electrical data to establish quantitative design rules for this promising technology.
{"title":"A hierarchical sub-modeling approach for the thermo-mechanical analysis of a TFT-FOPLP.","authors":"Hsien-Chie Cheng, Ching-Feng Yu","doi":"10.1177/00368504251403216","DOIUrl":"10.1177/00368504251403216","url":null,"abstract":"<p><p>To address the critical challenge of thermo-mechanical stress in large-area thin-film transistor fan-out panel-level packaging (TFT-FOPLP), this study employs a finite-element modeling to investigate stress distribution from the panel to the device scale. A hierarchical sub-modeling methodology was used, starting with a homogenized global model to identify high-stress regions, followed by two levels of sub-models to resolve stresses in a single TFT cell under simulated thermal cool-down from fabrication temperatures. Results identified the highest stress concentrations at the corners of dies near the panel edge. At the device level, the analysis revealed that the critical gate insulator is subjected to a tensile stress of approximately 44.5 MPa and a strain of about 0.1%, a level sufficient to potentially alter electrical performance. Furthermore, other brittle dielectric layers, such as the passivation layer, were predicted to experience significantly higher stresses (approximately 407 MPa), indicating a primary risk of mechanical fracture. The study affirms the mechanical feasibility of the TFT-FOPLP concept but underscores the need for careful stress mitigation in vulnerable regions. The presented modeling framework provides a powerful tool for design-for-reliability by enabling the early prediction of high-stress zones, thereby reducing reliance on physical prototyping. Future work should focus on correlating these simulations with experimental electrical data to establish quantitative design rules for this promising technology.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251403216"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12669554/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145656562","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-01Epub Date: 2025-11-19DOI: 10.1177/00368504251399549
Chen Bing-Xu, Xu Yi-Fei, Wang Zhi-Jun, Qiu Yuan-Gang, Chen Shen-Jie, Huang Shu-Wei, Zhu Min, Yang Bing-Sheng
In recent years, the application of aspirin for coronary artery disease has become increasingly common, and aspirin-related enteropathy has gradually garnered more attention. It has increasingly been recognized that the related enteropathy after the long-term use of NSAIDs may have potentially fatal side effects. However, it remains controversial how to select alternative medications for these patients with coronary heart disease, particularly for those who have recently undergone stent implantation. Our case presented with recurrent chest pain and coronary angiography revealed he had severe stenosis in the left anterior descending artery, nearly 90% at the opening, 80% at the middle segments, and a total occlusion at the distal segment, accompanied by a TIMI blood flow grade of 2. However, after five years of taking aspirin, the patient often felt fatigued and was found have megaloblastic anemia and thrombocytopenia. We attempted to prescribe indobufen as an alternative to aspirin for antiplatelet therapy. Fortunately, after several months of follow-up, the patient's symptoms were alleviated, and his hemoglobin and platelet levels returned to normal. Indobufen might be a potential alternative medication for these patients in clinical practice in the future.
{"title":"Acute coronary syndrome with thrombocytopenia and megaloblastic anemia: A case report.","authors":"Chen Bing-Xu, Xu Yi-Fei, Wang Zhi-Jun, Qiu Yuan-Gang, Chen Shen-Jie, Huang Shu-Wei, Zhu Min, Yang Bing-Sheng","doi":"10.1177/00368504251399549","DOIUrl":"10.1177/00368504251399549","url":null,"abstract":"<p><p>In recent years, the application of aspirin for coronary artery disease has become increasingly common, and aspirin-related enteropathy has gradually garnered more attention. It has increasingly been recognized that the related enteropathy after the long-term use of NSAIDs may have potentially fatal side effects. However, it remains controversial how to select alternative medications for these patients with coronary heart disease, particularly for those who have recently undergone stent implantation. Our case presented with recurrent chest pain and coronary angiography revealed he had severe stenosis in the left anterior descending artery, nearly 90% at the opening, 80% at the middle segments, and a total occlusion at the distal segment, accompanied by a TIMI blood flow grade of 2. However, after five years of taking aspirin, the patient often felt fatigued and was found have megaloblastic anemia and thrombocytopenia. We attempted to prescribe indobufen as an alternative to aspirin for antiplatelet therapy. Fortunately, after several months of follow-up, the patient's symptoms were alleviated, and his hemoglobin and platelet levels returned to normal. Indobufen might be a potential alternative medication for these patients in clinical practice in the future.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251399549"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12638649/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145558413","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-10-01Epub Date: 2025-12-23DOI: 10.1177/00368504251407127
Manuel E Taborda-Martínez, Adriana Rodríguez-Forero, Mitchell Bacho, Fabián Espitia-Almeida, Ericsson Coy-Barrera, Yeray A Rodríguez-Núñez
ObjectiveMarine organisms such as sea cucumbers represent valuable sources of specialized metabolites with promising applications, making them relevant targets for exploring metabolite distribution and subsequent in-depth characterization. This study aimed to chemically and biologically characterize the parent methanolic extract and its derived fractions, obtained through sequential liquid-liquid partitioning, from the sea cucumber Isostichopus sp. aff. badionotus collected from the Colombian Caribbean Sea.MethodsThe extract and fractions were analyzed using ultra-high-performance liquid chromatography coupled with mass spectrometry and the Global Natural Products Social-based molecular networking platform, enabling dereplication and identification of metabolites. Additionally, the extract and fractions were evaluated against eight Gram-positive and Gram-negative bacterial strains using broth microdilution assays.ResultsThe dichloromethane fractions exhibited the highest antibacterial activity against both Gram-positive and Gram-negative bacteria. For the first time, chemical characterization allowed the identification of a series of metabolites present in the extract and fractions.ConclusionThis study provides the first report on antibacterial activity in I. sp. aff. badionotus, demonstrating that medium-polarity compounds in the dichloromethane fraction exhibited moderate bacterial inhibition, particularly against Gram-positive strains.
海参等海洋生物是特殊代谢物的宝贵来源,具有广阔的应用前景,是探索代谢物分布和随后深入表征的相关靶点。本研究旨在对产自哥伦比亚加勒比海的海参Isostichopus sp. af . badionotus的亲本甲醇提取物及其衍生组分进行化学和生物学表征。方法采用超高效液相色谱-质谱联用技术和基于Global Natural Products social的分子网络平台对提取物和馏分进行分析,实现代谢物的分离和鉴定。此外,采用肉汤微量稀释法对提取液和馏分进行革兰氏阳性和革兰氏阴性菌株的对照试验。结果二氯甲烷组分对革兰氏阳性菌和革兰氏阴性菌的抑菌活性均最高。第一次,化学表征允许鉴定一系列代谢物存在于提取物和馏分。结论本研究首次报道了对臭草的抑菌活性,表明二氯甲烷组分中的中极性化合物具有中等抑菌活性,尤其是对革兰氏阳性菌的抑菌活性。
{"title":"Metabolite profiling-based characterization and antibacterial activity of sea cucumber <i>Isostichopus</i> sp. <i>aff. badionotus</i> from the Colombian Caribbean Sea.","authors":"Manuel E Taborda-Martínez, Adriana Rodríguez-Forero, Mitchell Bacho, Fabián Espitia-Almeida, Ericsson Coy-Barrera, Yeray A Rodríguez-Núñez","doi":"10.1177/00368504251407127","DOIUrl":"10.1177/00368504251407127","url":null,"abstract":"<p><p>ObjectiveMarine organisms such as sea cucumbers represent valuable sources of specialized metabolites with promising applications, making them relevant targets for exploring metabolite distribution and subsequent in-depth characterization. This study aimed to chemically and biologically characterize the parent methanolic extract and its derived fractions, obtained through sequential liquid-liquid partitioning, from the sea cucumber <i>Isostichopus</i> sp. <i>aff</i>. <i>badionotus</i> collected from the Colombian Caribbean Sea.MethodsThe extract and fractions were analyzed using ultra-high-performance liquid chromatography coupled with mass spectrometry and the Global Natural Products Social-based molecular networking platform, enabling dereplication and identification of metabolites. Additionally, the extract and fractions were evaluated against eight Gram-positive and Gram-negative bacterial strains using broth microdilution assays.ResultsThe dichloromethane fractions exhibited the highest antibacterial activity against both Gram-positive and Gram-negative bacteria. For the first time, chemical characterization allowed the identification of a series of metabolites present in the extract and fractions.ConclusionThis study provides the first report on antibacterial activity in <i>I.</i> sp. <i>aff</i>. <i>badionotus</i>, demonstrating that medium-polarity compounds in the dichloromethane fraction exhibited moderate bacterial inhibition, particularly against Gram-positive strains.</p>","PeriodicalId":56061,"journal":{"name":"Science Progress","volume":"108 4","pages":"368504251407127"},"PeriodicalIF":2.9,"publicationDate":"2025-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12743769/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145811975","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}