Pub Date : 2025-01-08DOI: 10.1016/j.ejmp.2025.104895
Roberto Sghedoni, Daniela Origgi, Noemi Cucurachi, Giuseppe Castiglioni Minischetti, Davide Alio, Giovanni Savini, Francesca Botta, Simona Marzi, Marco Aiello, Tiziana Rancati, Davide Cusumano, Letterio Salvatore Politi, Vittorio Didonna, Raffaella Massafra, Antonella Petrillo, Antonio Esposito, Sara Imparato, Luca Anemoni, Chandra Bortolotto, Lorenzo Preda, Luca Boldrini
{"title":"Stability of radiomic features in magnetic resonance imaging of the female pelvis: A multicentre phantom study.","authors":"Roberto Sghedoni, Daniela Origgi, Noemi Cucurachi, Giuseppe Castiglioni Minischetti, Davide Alio, Giovanni Savini, Francesca Botta, Simona Marzi, Marco Aiello, Tiziana Rancati, Davide Cusumano, Letterio Salvatore Politi, Vittorio Didonna, Raffaella Massafra, Antonella Petrillo, Antonio Esposito, Sara Imparato, Luca Anemoni, Chandra Bortolotto, Lorenzo Preda, Luca Boldrini","doi":"10.1016/j.ejmp.2025.104895","DOIUrl":"https://doi.org/10.1016/j.ejmp.2025.104895","url":null,"abstract":"","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"130 ","pages":"104895"},"PeriodicalIF":3.3,"publicationDate":"2025-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142967469","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1016/j.ejmp.2024.104883
M Rovituso, C F Groenendijk, E van der Wal, W van Burik, A Ibrahimi, H Rituerto Prieto, J M C Brown, U Weber, Y Simeonov, M Fontana, D Lathouwers, M van Vulpen, M Hoogeman
HollandPTC is an independent outpatient center for proton therapy, scientific research, and education. Patients with different types of cancer are treated with Intensity Modulated Proton Therapy (IMPT). Additionally, the HollandPTC R&D consortium conducts scientific research into the added value and improvements of proton therapy. To this end, HollandPTC created clinical and pre-clinical research facilities including a versatile R&D proton beamline for various types of biologically and technologically oriented research. In this work, we present the characterization of the R&D proton beamline of HollandPTC. Its pencil beam mimics the one used for clinical IMPT, with energy ranging from 70 up to 240 MeV, which has been characterized in terms of shape, size, and intensity. For experiments that need a uniform field in depth and lateral directions, a dual ring passive scattering system has been designed, built, and characterized. With this system, field sizes between 2 × 2 cm2 and 20 × 20 cm2 with 98 % uniformity are produced with dose rates ranging from 0.5 Gy/min up to 9 Gy/min. The unique and customized support of the dual ring system allows switching between a pencil beam and a large field in a very simple and fast way, making the HollandPTC R&D proton beam able to support a wide range of different applications.
{"title":"Characterisation of the HollandPTC R&D proton beamline for physics and radiobiology studies.","authors":"M Rovituso, C F Groenendijk, E van der Wal, W van Burik, A Ibrahimi, H Rituerto Prieto, J M C Brown, U Weber, Y Simeonov, M Fontana, D Lathouwers, M van Vulpen, M Hoogeman","doi":"10.1016/j.ejmp.2024.104883","DOIUrl":"https://doi.org/10.1016/j.ejmp.2024.104883","url":null,"abstract":"<p><p>HollandPTC is an independent outpatient center for proton therapy, scientific research, and education. Patients with different types of cancer are treated with Intensity Modulated Proton Therapy (IMPT). Additionally, the HollandPTC R&D consortium conducts scientific research into the added value and improvements of proton therapy. To this end, HollandPTC created clinical and pre-clinical research facilities including a versatile R&D proton beamline for various types of biologically and technologically oriented research. In this work, we present the characterization of the R&D proton beamline of HollandPTC. Its pencil beam mimics the one used for clinical IMPT, with energy ranging from 70 up to 240 MeV, which has been characterized in terms of shape, size, and intensity. For experiments that need a uniform field in depth and lateral directions, a dual ring passive scattering system has been designed, built, and characterized. With this system, field sizes between 2 × 2 cm<sup>2</sup> and 20 × 20 cm<sup>2</sup> with 98 % uniformity are produced with dose rates ranging from 0.5 Gy/min up to 9 Gy/min. The unique and customized support of the dual ring system allows switching between a pencil beam and a large field in a very simple and fast way, making the HollandPTC R&D proton beam able to support a wide range of different applications.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"130 ","pages":"104883"},"PeriodicalIF":3.3,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142959200","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-07DOI: 10.1016/j.ejmp.2025.104896
Michalis Mazonakis, Eleftherios Tzanis, Stefanos Kachris, Efrossyni Lyraraki, John Damilakis
Purpose: To investigate the performance of a machine learning-based segmentation method for treatment planning of gastric cancer.
Materials and methods: Eighteen patients planned to be irradiated for gastric cancer were studied. The target and the surrounding organs-at-risk (OARs) were manually delineated on CT scans. A machine learning algorithm was used for automatically segmenting the lungs, kidneys, liver, spleen and spinal cord. Two radiation oncologists evaluated these contours and performed the required editing. The accuracy of the auto-segmented contours relative to manual outlines was evaluated by calculating the dice similarity coefficient (DSC), Jaccard score (JS), sensitivity and precision. VMAT plans were initially created on manual contours (MCPlans) and, then, on edited and unedited auto-segmented contours (ACedPlans). Dose parameters of the OARs and target volume derived from the different treatment plans were statistically compared.
Results: The 24.6 % of the auto-segmented contours were acceptable and 40.5 % needed changes related to stylistic deviations. Minor editing was applied in 34.1 % of these contours. The mean values of the DSC, JS, sensitivity and precision associated with the comparison of the manual outlines and the contour set including edited and unedited auto-segmented contours were 0.91-0.97, 0.84-0.94, 0.92-0.97 and 0.91-0.97, respectively. No significant differences were found for fifteen out of eighteen examined dosimetric parameters derived from MCPlans and ACedPlans (p > 0.05). These parameters from the MCPlans agreed well with those from ACedPlans based on the Bland-Altman test.
Conclusions: The qualitative, quantitative and dosimetric analysis highlighted the clinical acceptability of a machine learning-based segmentation method for radiotherapy of gastric cancer.
{"title":"A qualitative, quantitative and dosimetric evaluation of a machine learning-based automatic segmentation method in treatment planning for gastric cancer.","authors":"Michalis Mazonakis, Eleftherios Tzanis, Stefanos Kachris, Efrossyni Lyraraki, John Damilakis","doi":"10.1016/j.ejmp.2025.104896","DOIUrl":"https://doi.org/10.1016/j.ejmp.2025.104896","url":null,"abstract":"<p><strong>Purpose: </strong>To investigate the performance of a machine learning-based segmentation method for treatment planning of gastric cancer.</p><p><strong>Materials and methods: </strong>Eighteen patients planned to be irradiated for gastric cancer were studied. The target and the surrounding organs-at-risk (OARs) were manually delineated on CT scans. A machine learning algorithm was used for automatically segmenting the lungs, kidneys, liver, spleen and spinal cord. Two radiation oncologists evaluated these contours and performed the required editing. The accuracy of the auto-segmented contours relative to manual outlines was evaluated by calculating the dice similarity coefficient (DSC), Jaccard score (JS), sensitivity and precision. VMAT plans were initially created on manual contours (MCPlans) and, then, on edited and unedited auto-segmented contours (AC<sub>ed</sub>Plans). Dose parameters of the OARs and target volume derived from the different treatment plans were statistically compared.</p><p><strong>Results: </strong>The 24.6 % of the auto-segmented contours were acceptable and 40.5 % needed changes related to stylistic deviations. Minor editing was applied in 34.1 % of these contours. The mean values of the DSC, JS, sensitivity and precision associated with the comparison of the manual outlines and the contour set including edited and unedited auto-segmented contours were 0.91-0.97, 0.84-0.94, 0.92-0.97 and 0.91-0.97, respectively. No significant differences were found for fifteen out of eighteen examined dosimetric parameters derived from MCPlans and AC<sub>ed</sub>Plans (p > 0.05). These parameters from the MCPlans agreed well with those from AC<sub>ed</sub>Plans based on the Bland-Altman test.</p><p><strong>Conclusions: </strong>The qualitative, quantitative and dosimetric analysis highlighted the clinical acceptability of a machine learning-based segmentation method for radiotherapy of gastric cancer.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"130 ","pages":"104896"},"PeriodicalIF":3.3,"publicationDate":"2025-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142959194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-03DOI: 10.1016/j.ejmp.2024.104888
Antonio Minopoli, Silvio Pardi, Gianfranco Paternò, Mariagabriella Pugliese, Paolo Cardarelli, Antonio Sarno
Purpose: This work aims at investigating, via in-silico evaluations, the noise properties of an innovative scanning geometry in cone-beam CT (CBCT): eCT. This scanning geometry substitutes each of the projections in CBCT with a series of collimated projections acquired over an oscillating scanning trajectory. The analysis focused on the impact of the number of the projections per period (PP) on the noise characteristics.
Methods: In-silico eCT scanner was simulated with a GPU based Monte Carlo software. We employed two homogeneous PMMA phantoms with a diameter of 12 cm and 16 cm whose tomographic images were reconstructed via an in-house developed software. Noise properties of the reconstructed volumes were evaluated in terms of coefficient of variation (COV), non-uniformity index , noise power spectrum (NPS), and null-cone over the 3D NPS.
Results: The beam narrowing at higher PP led to a significant reduction of cupping artifacts, with a non-uniformity index reducing of about 33% going from conventional CBCT to PP = 10. Oscillating scan orbits almost fully recovered missing data in conventional CBCT, with a narrowing of the null-cone in 3D NPS to below 2.5% for PP ≥ 5 compared to 11.0% in conventional CBCT at 6.5 cm from the orbit plane CONCLUSIONS: The work characterizes the noise in reconstructed 3D images in eCT, with particular focus on the NPS. The impact of the beam collimation on cupping artifacts reduction is outlined. Similarly, the missing data outlined by the null-cone is considerably narrowed in comparison to conventional CBCT, especially for portions of the FOV far from the middle-reconstructed plane.
{"title":"Noise power properties of a cone-beam CT scanner with unconventional scanning geometry.","authors":"Antonio Minopoli, Silvio Pardi, Gianfranco Paternò, Mariagabriella Pugliese, Paolo Cardarelli, Antonio Sarno","doi":"10.1016/j.ejmp.2024.104888","DOIUrl":"https://doi.org/10.1016/j.ejmp.2024.104888","url":null,"abstract":"<p><strong>Purpose: </strong>This work aims at investigating, via in-silico evaluations, the noise properties of an innovative scanning geometry in cone-beam CT (CBCT): eCT. This scanning geometry substitutes each of the projections in CBCT with a series of collimated projections acquired over an oscillating scanning trajectory. The analysis focused on the impact of the number of the projections per period (PP) on the noise characteristics.</p><p><strong>Methods: </strong>In-silico eCT scanner was simulated with a GPU based Monte Carlo software. We employed two homogeneous PMMA phantoms with a diameter of 12 cm and 16 cm whose tomographic images were reconstructed via an in-house developed software. Noise properties of the reconstructed volumes were evaluated in terms of coefficient of variation (COV), non-uniformity index , noise power spectrum (NPS), and null-cone over the 3D NPS.</p><p><strong>Results: </strong>The beam narrowing at higher PP led to a significant reduction of cupping artifacts, with a non-uniformity index reducing of about 33% going from conventional CBCT to PP = 10. Oscillating scan orbits almost fully recovered missing data in conventional CBCT, with a narrowing of the null-cone in 3D NPS to below 2.5% for PP ≥ 5 compared to 11.0% in conventional CBCT at 6.5 cm from the orbit plane CONCLUSIONS: The work characterizes the noise in reconstructed 3D images in eCT, with particular focus on the NPS. The impact of the beam collimation on cupping artifacts reduction is outlined. Similarly, the missing data outlined by the null-cone is considerably narrowed in comparison to conventional CBCT, especially for portions of the FOV far from the middle-reconstructed plane.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"130 ","pages":"104888"},"PeriodicalIF":3.3,"publicationDate":"2025-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142928756","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-12-17DOI: 10.1016/j.ejmp.2024.104867
Lucas Buvinic, Sophia Galvez, Maria Pia Valenzuela, Sebastian Salgado Maldonado, Andrea Russomando
Purpose: It is possible to combine theoretical models with Monte Carlo simulations to investigate the relationship between radiation-induced initial DNA damage and cell survival. Several combinations of models have been proposed in recent years, sparking interest in comparing their predictions in view of future clinical applications.
Methods: Two in silico methods for calculating cell survival fractions were optimized for proton irradiation of the Chinese hamster V79 cell line, for LET values ranging from 3.40 and 100 keV/μm. These methods, based on different Monte Carlo codes and theoretical models, were benchmarked against published V79 cell survival data to identify the sources of discrepancies.
Results: The predictive capacities of the methods were evaluated for several proton LET values using an external dataset. After recalibrating model parameters, multiple methods were assessed. This approach helped identify sources of variation, the main one being the simulated number of DSBs, which differed by a factor up to 3 between the two Monte Carlo codes. In this process a new method was defined, that, in all but one case, allows for a reduction in prediction error of up to 56%. Additionally, a freely available GUI for computing cell survival was refined, to facilitate further comparison of diverse theoretical models.
Conclusion: The systematic comparison of two predictive chains, characterized by distinct applicability ranges and features, was conducted. Optimization and analysis of various combinations were undertaken to elucidate differences. Addressing and minimizing such discrepancies will be crucial for further enhancing the reliability of predictive models of cell survival, aiming for biologically informed treatment planning.
{"title":"Comparison of in vitro cell survival predictions using Monte Carlo methods for proton irradiation.","authors":"Lucas Buvinic, Sophia Galvez, Maria Pia Valenzuela, Sebastian Salgado Maldonado, Andrea Russomando","doi":"10.1016/j.ejmp.2024.104867","DOIUrl":"10.1016/j.ejmp.2024.104867","url":null,"abstract":"<p><strong>Purpose: </strong>It is possible to combine theoretical models with Monte Carlo simulations to investigate the relationship between radiation-induced initial DNA damage and cell survival. Several combinations of models have been proposed in recent years, sparking interest in comparing their predictions in view of future clinical applications.</p><p><strong>Methods: </strong>Two in silico methods for calculating cell survival fractions were optimized for proton irradiation of the Chinese hamster V79 cell line, for LET values ranging from 3.40 and 100 keV/μm. These methods, based on different Monte Carlo codes and theoretical models, were benchmarked against published V79 cell survival data to identify the sources of discrepancies.</p><p><strong>Results: </strong>The predictive capacities of the methods were evaluated for several proton LET values using an external dataset. After recalibrating model parameters, multiple methods were assessed. This approach helped identify sources of variation, the main one being the simulated number of DSBs, which differed by a factor up to 3 between the two Monte Carlo codes. In this process a new method was defined, that, in all but one case, allows for a reduction in prediction error of up to 56%. Additionally, a freely available GUI for computing cell survival was refined, to facilitate further comparison of diverse theoretical models.</p><p><strong>Conclusion: </strong>The systematic comparison of two predictive chains, characterized by distinct applicability ranges and features, was conducted. Optimization and analysis of various combinations were undertaken to elucidate differences. Addressing and minimizing such discrepancies will be crucial for further enhancing the reliability of predictive models of cell survival, aiming for biologically informed treatment planning.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"129 ","pages":"104867"},"PeriodicalIF":3.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142856960","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-12-25DOI: 10.1016/j.ejmp.2024.104881
Mehdi Astaraki, Wille Häger, Marta Lazzeroni, Iuliana Toma-Dasu
Purpose: We investigate the feasibility of using a biophysically guided approach for delineating the Clinical Target Volume (CTV) in Glioblastoma Multiforme (GBM) by evaluating its impact on the treatment outcomes, specifically Overall Survival (OS) time.
Methods: An established reaction-diffusion model was employed to simulate the spatiotemporal evolution of cancerous regions in T1-MRI images of GBM patients. The effects of the parameters of this model on the simulated tumor borders were quantified and the optimal values were used to estimate the distribution of infiltrative cells (CTVmodel). Radiomics and deep learning models were examined to predict the OS time by analyzing the GTV, clinical CTV, and CTVmodel.
Results: The study involves 126 subjects for model development and 62 independent subjects for testing. Evaluation of the proposed approach demonstrates comparable predictive power for OS time that is achieved with the clinically defined CTV. Specifically, for the binary survival prediction, short vs. long time, the proposed CTVmodelresulted in improvements of prognostic power, in terms of AUROC, both for the validation (0.77 from 0.75) and the testing (0.73 from 0.71) set. Quantitative comparisons for three-class prediction and survival regression models exhibited a similar trend of comparable performance.
Conclusion: The findings highlight the potential of biophysical modeling for estimating and incorporating the spread of infiltrating cells into CTV delineation. Further clinical investigations are required to validate the clinical efficacy.
{"title":"Radiomics and deep learning models for glioblastoma treatment outcome prediction based on tumor invasion modeling.","authors":"Mehdi Astaraki, Wille Häger, Marta Lazzeroni, Iuliana Toma-Dasu","doi":"10.1016/j.ejmp.2024.104881","DOIUrl":"10.1016/j.ejmp.2024.104881","url":null,"abstract":"<p><strong>Purpose: </strong>We investigate the feasibility of using a biophysically guided approach for delineating the Clinical Target Volume (CTV) in Glioblastoma Multiforme (GBM) by evaluating its impact on the treatment outcomes, specifically Overall Survival (OS) time.</p><p><strong>Methods: </strong>An established reaction-diffusion model was employed to simulate the spatiotemporal evolution of cancerous regions in T1-MRI images of GBM patients. The effects of the parameters of this model on the simulated tumor borders were quantified and the optimal values were used to estimate the distribution of infiltrative cells (CTVmodel). Radiomics and deep learning models were examined to predict the OS time by analyzing the GTV, clinical CTV, and CTVmodel.</p><p><strong>Results: </strong>The study involves 126 subjects for model development and 62 independent subjects for testing. Evaluation of the proposed approach demonstrates comparable predictive power for OS time that is achieved with the clinically defined CTV. Specifically, for the binary survival prediction, short vs. long time, the proposed CTVmodelresulted in improvements of prognostic power, in terms of AUROC, both for the validation (0.77 from 0.75) and the testing (0.73 from 0.71) set. Quantitative comparisons for three-class prediction and survival regression models exhibited a similar trend of comparable performance.</p><p><strong>Conclusion: </strong>The findings highlight the potential of biophysical modeling for estimating and incorporating the spread of infiltrating cells into CTV delineation. Further clinical investigations are required to validate the clinical efficacy.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"129 ","pages":"104881"},"PeriodicalIF":3.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142900584","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-12-05DOI: 10.1016/j.ejmp.2024.104868
Bisma B Patrianesha, Steffie M B Peters, Deni Hardiansyah, Rien Ritawidya, Bastiaan M Privé, James Nagarajah, Mark W Konijnenberg, Gerhard Glatting
Purpose: This study aimed to determine the effect of model selection on simplified dosimetry for the kidneys using Bayesian fitting (BF) and single-time-point (STP) imaging.
Methods: Kidney biokinetics data of [177Lu]Lu-PSMA-617 from mHSPC were collected using SPECT/CT after injection of (3.1 ± 0.1) GBq at time points T1(2.3 ± 0.5), T2(23.8 ± 2.0), T3(47.7 ± 2.2), T4(71.8 ± 2.2), and T5(167.4 ± 1.9) h post-injection. Eleven functions with various parameterizations and a combination of shared and individual parameters were used for model selection. Model averaging of functions with an Akaike weight of >10 % was used to calculate the reference TIAC (TIACREF). STP BF method (STP-BF) was performed to determine the STP TIACs (TIACSTP-BF). The STP-BF performance was assessed by calculating the root-mean-square error (RMSE) of relative deviation between TIACSTP-BF and TIACREF. In addition, the STP-BF performance was compared to the Hänscheid Method.
Results: The function [Formula: see text] with shared parameter λ2 was selected as the best function (Akaike weight of 57.91 %). STP-BF using the best function resulted in RMSEs of 20.3 %, 9.1 %, 8.4 %, 13.6 %, and 19.3 % at T1, T2, T3, T4, and T5, respectively. The RMSEs of STP-Hänscheid were 22.4 %, 14.6 %, and 21.9 % at T2, T3, and T4, respectively.
Conclusion: A model selection was presented to determine the fit function for calculating TIACs in STP-BF. This study shows that the STP dosimetry using BF and model selection performed better than the frequently used STP Hänscheid method.
{"title":"Single-time-point dosimetry using model selection and the Bayesian fitting method: A proof of concept.","authors":"Bisma B Patrianesha, Steffie M B Peters, Deni Hardiansyah, Rien Ritawidya, Bastiaan M Privé, James Nagarajah, Mark W Konijnenberg, Gerhard Glatting","doi":"10.1016/j.ejmp.2024.104868","DOIUrl":"10.1016/j.ejmp.2024.104868","url":null,"abstract":"<p><strong>Purpose: </strong>This study aimed to determine the effect of model selection on simplified dosimetry for the kidneys using Bayesian fitting (BF) and single-time-point (STP) imaging.</p><p><strong>Methods: </strong>Kidney biokinetics data of [<sup>177</sup>Lu]Lu-PSMA-617 from mHSPC were collected using SPECT/CT after injection of (3.1 ± 0.1) GBq at time points T1(2.3 ± 0.5), T2(23.8 ± 2.0), T3(47.7 ± 2.2), T4(71.8 ± 2.2), and T5(167.4 ± 1.9) h post-injection. Eleven functions with various parameterizations and a combination of shared and individual parameters were used for model selection. Model averaging of functions with an Akaike weight of >10 % was used to calculate the reference TIAC (TIAC<sub>REF</sub>). STP BF method (STP-BF) was performed to determine the STP TIACs (TIAC<sub>STP-BF</sub>). The STP-BF performance was assessed by calculating the root-mean-square error (RMSE) of relative deviation between TIAC<sub>STP-BF</sub> and TIAC<sub>REF</sub>. In addition, the STP-BF performance was compared to the Hänscheid Method.</p><p><strong>Results: </strong>The function [Formula: see text] with shared parameter λ<sub>2</sub> was selected as the best function (Akaike weight of 57.91 %). STP-BF using the best function resulted in RMSEs of 20.3 %, 9.1 %, 8.4 %, 13.6 %, and 19.3 % at T1, T2, T3, T4, and T5, respectively. The RMSEs of STP-Hänscheid were 22.4 %, 14.6 %, and 21.9 % at T2, T3, and T4, respectively.</p><p><strong>Conclusion: </strong>A model selection was presented to determine the fit function for calculating TIACs in STP-BF. This study shows that the STP dosimetry using BF and model selection performed better than the frequently used STP Hänscheid method.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"129 ","pages":"104868"},"PeriodicalIF":3.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142793126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-12-11DOI: 10.1016/j.ejmp.2024.104872
Cristina Oancea, Katerina Sykorova, Jan Jakubek, Jiri Pivec, Felix Riemer, Steven Worm, Alexandra Bourgouin
Background: FLASH radiotherapy necessitates the development of advanced Quality Assurance methods and detectors for accurate monitoring of the radiation field. This study introduces enhanced time-resolution detection systems and methods used to measure the delivered number of pulses, investigate temporal structure of individual pulses and dose-per-pulse (DPP) based on secondary radiation particles produced in the experimental room.
Methods: A 20 MeV electron beam generated from a linear accelerator (LINAC) was delivered to a water phantom. Ultra-high dose-per-pulse electron beams were used with a dose-per-pulse ranging from ̴ 1 Gy to over 7 Gy. The pulse lengths ranged from 1.18 µs to 2.88 µs at a pulse rate frequency of 5 Hz. A semiconductor pixel detector Timepix3 was used to track single secondary particles. Measurements were performed in the air, while the detector was positioned out-of-field at a lateral distance of 200 cm parallel with the LINAC exit window. The dose deposited was measured along with the pulse length and the nanostructure of the pulse.
Results: The time of arrival (ToA) of single particles was measured with a resolution of 1.56 ns, while the deposited energy was measured with a resolution of several keV based on the Time over Threshold (ToT) value. The pulse count measured by the Timepix3 detector corresponded with the delivered values, which were measured using an in-flange integrating current transformer (ICT). A linear response (R2 = 0.999) was established between the delivered beam current and the measured dose at the detector position (orders of nGy). The difference between the average measured and delivered pulse length was ∼0.003(30) μs.
Conclusion: This simple non-invasive method exhibits no limitations on the delivered DPP within the range used during this investigation.
{"title":"Dosimetric and temporal beam characterization of individual pulses in FLASH radiotherapy using Timepix3 pixelated detector placed out-of-field.","authors":"Cristina Oancea, Katerina Sykorova, Jan Jakubek, Jiri Pivec, Felix Riemer, Steven Worm, Alexandra Bourgouin","doi":"10.1016/j.ejmp.2024.104872","DOIUrl":"10.1016/j.ejmp.2024.104872","url":null,"abstract":"<p><strong>Background: </strong>FLASH radiotherapy necessitates the development of advanced Quality Assurance methods and detectors for accurate monitoring of the radiation field. This study introduces enhanced time-resolution detection systems and methods used to measure the delivered number of pulses, investigate temporal structure of individual pulses and dose-per-pulse (DPP) based on secondary radiation particles produced in the experimental room.</p><p><strong>Methods: </strong>A 20 MeV electron beam generated from a linear accelerator (LINAC) was delivered to a water phantom. Ultra-high dose-per-pulse electron beams were used with a dose-per-pulse ranging from ̴ 1 Gy to over 7 Gy. The pulse lengths ranged from 1.18 µs to 2.88 µs at a pulse rate frequency of 5 Hz. A semiconductor pixel detector Timepix3 was used to track single secondary particles. Measurements were performed in the air, while the detector was positioned out-of-field at a lateral distance of 200 cm parallel with the LINAC exit window. The dose deposited was measured along with the pulse length and the nanostructure of the pulse.</p><p><strong>Results: </strong>The time of arrival (ToA) of single particles was measured with a resolution of 1.56 ns, while the deposited energy was measured with a resolution of several keV based on the Time over Threshold (ToT) value. The pulse count measured by the Timepix3 detector corresponded with the delivered values, which were measured using an in-flange integrating current transformer (ICT). A linear response (R<sup>2</sup> = 0.999) was established between the delivered beam current and the measured dose at the detector position (orders of nGy). The difference between the average measured and delivered pulse length was ∼0.003(30) μs.</p><p><strong>Conclusion: </strong>This simple non-invasive method exhibits no limitations on the delivered DPP within the range used during this investigation.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"129 ","pages":"104872"},"PeriodicalIF":3.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142820134","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-12-16DOI: 10.1016/j.ejmp.2024.104877
Shidi Miao, Qi Dong, Le Liu, Qifan Xuan, Yunfei An, Hongzhuo Qi, Qiujun Wang, Zengyao Liu, Ruitao Wang
Background: Recent studies in the field of lung cancer have emphasized the important role of body composition, particularly fatty tissue, as a prognostic factor. However, there is still a lack of practice in combining fatty tissue to discriminate benign and malignant pulmonary nodules.
Purpose: This study proposes a deep learning (DL) approach to explore the potential predictive value of dual imaging markers, including intrathoracic fat (ITF), in patients with pulmonary nodules.
Methods: We enrolled 1321 patients with pulmonary nodules from three centers. Image feature extraction was performed on computed tomography (CT) images of pulmonary nodules and ITF by DL, multimodal information was used to discriminate benign and malignant in patients with pulmonary nodules.
Results: Here, the areas under the receiver operating characteristic curve (AUC) of the model for ITF combined with pulmonary nodules were 0.910(95 % confidence interval [CI]: 0.870-0.950, P = 0.016), 0.922(95 % CI: 0.883-0.960, P = 0.037) and 0.899(95 % CI: 0.849-0.949, P = 0.033) in the internal test cohort, external test cohort1 and external test cohort2, respectively, which were significantly better than the model for pulmonary nodules. Intrathoracic fat index (ITFI) emerged as an independent influencing factor for benign and malignant in patients with pulmonary nodules, correlating with a 9.4 % decrease in the risk of malignancy for each additional unit.
Conclusion: This study demonstrates the potential auxiliary predictive value of ITF as a noninvasive imaging biomarker in assessing pulmonary nodules.
背景:最近在肺癌领域的研究强调了身体成分,特别是脂肪组织作为预后因素的重要作用。然而,结合脂肪组织鉴别肺结节良恶性的实践尚缺乏。目的:本研究提出了一种深度学习(DL)方法,探讨包括胸内脂肪(ITF)在内的双重影像学标志物在肺结节患者中的潜在预测价值。方法:我们从三个中心招募了1321例肺结节患者。通过DL对肺结节和ITF的CT图像进行图像特征提取,利用多模态信息鉴别肺结节的良恶性。结果:ITF合并肺结节模型的受试者工作特征曲线下面积(AUC)在内测队列、外测队列1和外测队列2中分别为0.910(95%可信区间[CI]: 0.870 ~ 0.950, P = 0.016)、0.922(95% CI: 0.883 ~ 0.960, P = 0.037)和0.899(95% CI: 0.849 ~ 0.949, P = 0.033),均显著优于肺结节模型。胸内脂肪指数(ITFI)是肺结节患者良性和恶性的独立影响因素,每增加一个单位,恶性风险降低9.4%。结论:本研究证明了ITF作为一种无创成像生物标志物在评估肺结节中的潜在辅助预测价值。
{"title":"Dual biomarkers CT-based deep learning model incorporating intrathoracic fat for discriminating benign and malignant pulmonary nodules in multi-center cohorts.","authors":"Shidi Miao, Qi Dong, Le Liu, Qifan Xuan, Yunfei An, Hongzhuo Qi, Qiujun Wang, Zengyao Liu, Ruitao Wang","doi":"10.1016/j.ejmp.2024.104877","DOIUrl":"10.1016/j.ejmp.2024.104877","url":null,"abstract":"<p><strong>Background: </strong>Recent studies in the field of lung cancer have emphasized the important role of body composition, particularly fatty tissue, as a prognostic factor. However, there is still a lack of practice in combining fatty tissue to discriminate benign and malignant pulmonary nodules.</p><p><strong>Purpose: </strong>This study proposes a deep learning (DL) approach to explore the potential predictive value of dual imaging markers, including intrathoracic fat (ITF), in patients with pulmonary nodules.</p><p><strong>Methods: </strong>We enrolled 1321 patients with pulmonary nodules from three centers. Image feature extraction was performed on computed tomography (CT) images of pulmonary nodules and ITF by DL, multimodal information was used to discriminate benign and malignant in patients with pulmonary nodules.</p><p><strong>Results: </strong>Here, the areas under the receiver operating characteristic curve (AUC) of the model for ITF combined with pulmonary nodules were 0.910(95 % confidence interval [CI]: 0.870-0.950, P = 0.016), 0.922(95 % CI: 0.883-0.960, P = 0.037) and 0.899(95 % CI: 0.849-0.949, P = 0.033) in the internal test cohort, external test cohort1 and external test cohort2, respectively, which were significantly better than the model for pulmonary nodules. Intrathoracic fat index (ITFI) emerged as an independent influencing factor for benign and malignant in patients with pulmonary nodules, correlating with a 9.4 % decrease in the risk of malignancy for each additional unit.</p><p><strong>Conclusion: </strong>This study demonstrates the potential auxiliary predictive value of ITF as a noninvasive imaging biomarker in assessing pulmonary nodules.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"129 ","pages":"104877"},"PeriodicalIF":3.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142848531","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-01-01Epub Date: 2024-12-12DOI: 10.1016/j.ejmp.2024.104871
Laura Ballisat, Chiara De Sio, Lana Beck, Anna L Chambers, Mark S Dillingham, Susanna Guatelli, Dousatsu Sakata, Yuyao Shi, Jinyan Duan, Jaap Velthuis, Anatoly Rosenfeld
Purpose: Understanding cell cycle variations in radiosensitivity is important for α-particle therapies. Differences are due to both repair response mechanisms and the quantity of initial radiation-induced DNA strand breaks. Genome compaction within the nucleus has been shown to impact the yield of strand breaks. Compaction changes during the cell cycle are therefore likely to contribute to radiosensitivity differences. Simulation allows the strand break yield to be calculated independently of repair mechanisms which would be challenging experimentally.
Methods: Using Geant4 the impact of genome compaction changes on strand break induction due to α-particles was simulated. Genome compaction is considered to be described by three metrics: global base pair density, chromatin fibre packing fraction and chromosome condensation. Nuclei in the G1, S, G2 and M phases from two cancer cell lines and one normal cell line are simulated. Repair mechanisms are not considered to study only the impact of genome compaction changes.
Results: The three compaction metrics have differing effects on the strand break yield. For all cell lines the strand break yield is greatest in G2 cells and least in G1 cells. More strand breaks are induced in the two cancer cell lines than in the normal cell line.
Conclusions: Compaction of the genome affects the initial yield of strand breaks. Some radiosensitivity differences between cell lines can be attributed to genome compaction changes between the phases of the cell cycle. This study provides a basis for further analysis of how repair deficiencies impact radiation-induced lethality in normal and malignant cells.
目的:了解辐射敏感性的细胞周期变化对于α粒子疗法非常重要。造成差异的原因既包括修复反应机制,也包括最初辐射诱导的 DNA 断裂链数量。细胞核内的基因组压实度已被证明会影响断链的数量。因此,细胞周期中的压实变化很可能是造成辐射敏感性差异的原因。通过模拟,可以计算出独立于修复机制的链断裂率,而这在实验中是具有挑战性的:方法:利用 Geant4 模拟了基因组压实变化对 α 粒子导致的链断裂诱导的影响。基因组压实由三个指标描述:全局碱基对密度、染色质纤维堆积分数和染色体缩合。模拟了两个癌细胞系和一个正常细胞系在 G1、S、G2 和 M 期的细胞核。不考虑修复机制,只研究基因组压实变化的影响:结果:三种压实度量对断裂率的影响各不相同。在所有细胞系中,G2 细胞的断链率最高,G1 细胞的断链率最低。与正常细胞系相比,两种癌症细胞系诱发的断链更多:结论:基因组的压实会影响最初的断链量。细胞系之间的一些辐射敏感性差异可归因于细胞周期不同阶段的基因组压实变化。这项研究为进一步分析修复缺陷如何影响辐射诱导的正常细胞和恶性细胞致死率提供了基础。
{"title":"Simulation of cell cycle effects on DNA strand break induction due to α-particles.","authors":"Laura Ballisat, Chiara De Sio, Lana Beck, Anna L Chambers, Mark S Dillingham, Susanna Guatelli, Dousatsu Sakata, Yuyao Shi, Jinyan Duan, Jaap Velthuis, Anatoly Rosenfeld","doi":"10.1016/j.ejmp.2024.104871","DOIUrl":"10.1016/j.ejmp.2024.104871","url":null,"abstract":"<p><strong>Purpose: </strong>Understanding cell cycle variations in radiosensitivity is important for α-particle therapies. Differences are due to both repair response mechanisms and the quantity of initial radiation-induced DNA strand breaks. Genome compaction within the nucleus has been shown to impact the yield of strand breaks. Compaction changes during the cell cycle are therefore likely to contribute to radiosensitivity differences. Simulation allows the strand break yield to be calculated independently of repair mechanisms which would be challenging experimentally.</p><p><strong>Methods: </strong>Using Geant4 the impact of genome compaction changes on strand break induction due to α-particles was simulated. Genome compaction is considered to be described by three metrics: global base pair density, chromatin fibre packing fraction and chromosome condensation. Nuclei in the G1, S, G2 and M phases from two cancer cell lines and one normal cell line are simulated. Repair mechanisms are not considered to study only the impact of genome compaction changes.</p><p><strong>Results: </strong>The three compaction metrics have differing effects on the strand break yield. For all cell lines the strand break yield is greatest in G2 cells and least in G1 cells. More strand breaks are induced in the two cancer cell lines than in the normal cell line.</p><p><strong>Conclusions: </strong>Compaction of the genome affects the initial yield of strand breaks. Some radiosensitivity differences between cell lines can be attributed to genome compaction changes between the phases of the cell cycle. This study provides a basis for further analysis of how repair deficiencies impact radiation-induced lethality in normal and malignant cells.</p>","PeriodicalId":56092,"journal":{"name":"Physica Medica-European Journal of Medical Physics","volume":"129 ","pages":"104871"},"PeriodicalIF":3.3,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142820150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}