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Higher-Order Behaviours in Bio-Inspired Materials 生物启发材料的高阶行为
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-04-16 DOI: 10.1002/syst.202400014
Dr. Aina Rebasa-Vallverdu, Dr. Manuel Antuch, Beatrice Rosetti, Dr. Nicoletta Braidotti, Prof. Pierangelo Gobbo

Bio-inspired approaches in materials science and systems chemistry are yielding a variety of stimuli-responsive and dynamic materials that are gradually changing our everyday life. However, the ability to chemically program these materials to exhibit macroscopic higher-order behaviours such as self-assembly, contractility, swarming, taxis, chemical communication, or predator-prey dynamics remains an ongoing challenge. While still in its infancy, the successful fabrication of bio-inspired materials displaying higher-order behaviours not only will help bridging the gap between living and non-living matter, but it will also contribute to the development of advanced materials for potential applications ranging from tissue engineering and biotechnology, to soft robotics and regenerative medicine. Our Mini-Review will systematically discuss the higher-order behaviours developed thus far in bio-inspired systems, namely (i) polymer networks (ii) microbots, (iii) protocells, and (iv) prototissues. For each system it will provide key examples and highlight how the emergent behaviour could be chemically programmed.

材料科学和系统化学中的生物启发方法正在产生各种刺激响应型动态材料,它们正在逐渐改变我们的日常生活。然而,如何对这些材料进行化学编程,使其表现出宏观的高阶行为,如自组装、收缩性、蜂群、滑行、化学通讯或捕食者-猎物动力学,仍然是一个持续的挑战。虽然生物启发材料的制造仍处于起步阶段,但成功制造出具有高阶行为的生物启发材料不仅有助于缩小生命物质与非生命物质之间的差距,还有助于开发先进材料,使其具有从组织工程和生物技术到软机器人和再生医学等各种潜在应用。我们的微型综述将系统地讨论迄今为止在生物启发系统中开发的高阶行为,即 (i) 聚合物网络 (ii) 微型机器人 (iii) 原型细胞 (iv) 原型组织。它将为每种系统提供关键实例,并重点介绍如何通过化学方法对出现的行为进行编程。
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引用次数: 0
Cysteine-Based Dynamic Self-Assembly and Their Importance in the Origins of Life 基于半胱氨酸的动态自组装及其在生命起源中的重要性
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-04-12 DOI: 10.1002/syst.202400022
Soumen Kuila, Jayanta Nanda

The knowledge regarding the origins of life from inanimate materials is still elusive. It was proposed that biological building blocks evolved from the inorganic substances present in the early earth conditions. However, the process by which chemistry can be converted into biology has not yet been achieved in the laboratory. The artificial system in the out-of-equilibrium state must maintain a few critical features of life, like compartmentalization, metabolism, and replication, to be considered alive. In this direction, working with cysteine (Cys)-based molecules is strategic to understand the life evolution process. The presence of the sulphydryl (−SH) group in the Cys-residue can build a dynamic equilibrium state through disulfide redox chemistry under the proper guidance of oxidizing and reducing agents. In this review article, our primary focus is to discuss the Cys-containing short-peptide-based self-assembly and disassembly processes. The formation of disulfide bonds sometimes helps in the self-assembly process and gelation, but the reverse is also true in some cases. In the later part of this article, we cover the fact that these sulphydryl-based systems have shown their adaptability to mimic different life-essential criteria to participate in Darwinian evolution.

关于生命从无生命物质中起源的知识仍然难以捉摸。有人提出,在早期地球条件下,生物构件是由无机物演化而来的。然而,化学转化为生物的过程尚未在实验室中实现。处于失衡状态的人工系统必须保持生命的一些关键特征,如分隔、新陈代谢和复制,才能被认为是有生命的。在这一方向上,使用半胱氨酸(Cys)基分子对了解生命进化过程具有战略意义。在氧化剂和还原剂的正确引导下,半胱氨酸残基中巯基(-SH)的存在可通过二硫氧化还原化学作用建立动态平衡状态。在这篇综述文章中,我们主要讨论基于含 Cys 短肽的自组装和拆分过程。二硫键的形成有时有助于自组装过程和凝胶化,但在某些情况下也会出现相反的情况。在本文的后半部分,我们将介绍这些基于巯基的系统在模拟不同生命基本标准以参与达尔文进化方面所表现出的适应性。
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引用次数: 0
Evidence of Selection in Mineral Mediated Polymerization Reactions Executed in a Robotic Chemputer System 在机器人化学计算机系统中执行的矿物介导聚合反应中的选择证据
Pub Date : 2024-03-07 DOI: 10.1002/syst.202400006
Silke Asche, Robert W. Pow, Hessam M. Mehr, Geoffrey J. T. Cooper, Abhishek Sharma, Prof. Leroy Cronin

It has long been thought that abiogenesis requires a process of selection and evolution at the molecular level, but this process is hard to explore experimentally. One solution could be the use of automation in experiments which could allow for traceability and the ability to explore a larger reaction space. We report a fully programmable and automated platform to explore the reactions of amino acids in the presence of mineral environments. The robotic system is based upon the Chemputer system which has well defined modules, software, and a chemical programming language to orchestrate the chemical processes, including analysis. The reaction mixtures were analysed with tandem mass spectrometry and a peptide sequencing algorithm. Each experiment was screened for 1,398,100 possible unique sequences, and more than 550 specifically defined sequences were confirmed experimentally. This work aimed to develop a new understanding of selection in repeated cycles of polymerisation reactions to explore the emergence of well-defined amino acid sequences. We found that the outcome of oligomerisation was significantly influenced by the presence of different minerals, and that a serpentine environment selects glycine and phenylalanine rich fragments that enable the formation of longer oligomers with well-defined sequences as a function of cycle number.

长期以来,人们一直认为生物的产生需要一个分子水平的选择和进化过程,但这一过程很难通过实验来探索。解决方案之一是在实验中使用自动化,这样可以实现可追溯性,并能探索更大的反应空间。我们报告了一个完全可编程的自动化平台,用于探索氨基酸在矿物环境中的反应。机器人系统以 Chemputer 系统为基础,该系统具有定义明确的模块、软件和化学编程语言,可协调包括分析在内的化学过程。反应混合物采用串联质谱法和肽测序算法进行分析。每次实验都筛选出 1,398,100 个可能的独特序列,并通过实验确认了超过 550 个明确定义的序列。这项工作旨在对重复聚合反应循环中的选择形成新的认识,以探索定义明确的氨基酸序列的出现。我们发现,不同矿物质的存在对低聚物的结果有显著影响,蛇纹石环境会选择富含甘氨酸和苯丙氨酸的片段,从而形成具有明确序列的较长的低聚物,这与循环次数有关。
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引用次数: 0
Towards Autonomous Materials–Challenges in Chemical Communication 迈向自主材料--化学交流中的挑战
Pub Date : 2024-03-07 DOI: 10.1002/syst.202400005
P. Jarne de Jong, Foteini Trigka, Dr. Michael M. Lerch

Coordination of functions in multi-body or multi-component systems requires communication among its parts and is a prerequisite for achieving complex tasks. While electromagnetic (network) communication provides a key ingredient for modern robotics, its molecular equivalent is largely missing for soft robots. With advancements in programmed cargo release, DNA strand-displacement reactions, enzymatic cascades, and genetic circuits, budding solutions to such chemical network communication have emerged with the potential to drive function in soft machines. In order for such chemical communication to be useful, however, new control concepts, (orthogonal) communication protocols, and molecular solutions should be found. Herein, we provide a critical perspective on the current state-of-the-art chemical communication and identify key challenges towards autonomous soft materials, including signal processing, dealing with noise, switching signaling modalities, and limitations in time and length scales that determine material design. Building on an emerging body of examples, we illustrate gaps, synergies, and new concepts that may provide possible solutions to achieve standardized and reliable molecular information exchange for regulating (soft) robotic function.

多体或多组件系统的功能协调需要各部分之间的通信,这是完成复杂任务的先决条件。电磁(网络)通信为现代机器人技术提供了一个关键要素,但软体机器人在很大程度上却缺少与之对应的分子通信。随着在程序化货物释放、DNA 链置换反应、酶级联和遗传电路方面取得的进展,这种化学网络通信的萌芽方案已经出现,并有可能驱动软机器的功能。然而,为了使这种化学通讯发挥作用,应该找到新的控制概念、(正交)通讯协议和分子解决方案。在此,我们将从批判性的角度探讨当前最先进的化学通讯技术,并指出实现自主软材料所面临的关键挑战,包括信号处理、噪音处理、信号模式切换以及决定材料设计的时间和长度尺度限制。在新出现的大量实例基础上,我们说明了差距、协同作用和新概念,这些都可能为实现标准化和可靠的分子信息交换以调节(软)机器人功能提供可能的解决方案。
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引用次数: 0
Front Cover: Crown Ether Active Template Synthesis of Rotaxanes (ChemSystemsChem 2/2024) 封面:冠醚活性模板合成轮烷(ChemSystemsChem 2/2024)
Pub Date : 2024-02-26 DOI: 10.1002/syst.202400018
Dr. Stephen D. P. Fielden

The Front Cover illustrates the formation of a rotaxane by crown ether active template synthesis (CEATS). Depicted is the aminolysis of an activated ester, which produces a rotaxane containing an amide thread. Cover design by Anna Tanczos, Sci-Comm Studios. More information can be found in the Concept by Stephen D. P. Fielden.

封面展示了通过冠醚活性模板合成(CEATS)形成轮烷的过程。图中描述的是活化酯的氨解过程,该过程产生了含有酰胺线的轮烷。封面设计:Anna Tanczos,Sci-Comm Studios。更多信息请参阅斯蒂芬.P.Fielden.
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引用次数: 0
Membrane Transport, Molecular Machines, and Maxwell's Demon 膜传输、分子机器和麦克斯韦恶魔
Pub Date : 2024-02-09 DOI: 10.1002/syst.202400004
Stefan Borsley
The spontaneous generation of transmembrane gradients is an important fundamental research goal for artificial nanotechnology. The active transport processes that give rise to such gradients directly mirror the famous Maxwell’s Demon thought experiment, where a Demon partitions particles between two chambers to generate a nonequilibrium state. Despite these similarities, discussion of Maxwell’s Demon is absent in the literature on artificial membrane transport. By contrast, the emergence of rational design principles for nonequilibrium artificial molecular motors can trace its intellectual rotes directly to this famous thought experiment. This perspective highlights the links between Maxwell’s Demon and nonequilibrium machines, and argues that understanding the implications of this 19th century thought experiment is crucial to the future development of active membrane transport processes.
自发产生跨膜梯度是人工纳米技术的一个重要基础研究目标。产生这种梯度的主动传输过程直接反映了著名的麦克斯韦恶魔思想实验,即恶魔在两个腔室之间分隔粒子以产生非平衡态。尽管存在这些相似之处,但在有关人工膜传输的文献中却没有关于麦克斯韦恶魔的讨论。相比之下,非平衡人工分子马达的合理设计原则的出现可以直接追溯到这个著名的思想实验。这一观点强调了麦克斯韦妖与非平衡机器之间的联系,并认为理解这一 19 世纪思想实验的含义对于未来主动膜传输过程的发展至关重要。
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引用次数: 0
Membrane Transport, Molecular Machines, and Maxwell's Demon 膜传输、分子机器和麦克斯韦恶魔
Pub Date : 2024-02-09 DOI: 10.1002/syst.202400004
Dr. Stefan Borsley

The spontaneous generation of transmembrane gradients is an important fundamental research goal for artificial nanotechnology. The active transport processes that give rise to such gradients directly mirror the famous Maxwell's Demon thought experiment, where a Demon partitions particles between two chambers to generate a nonequilibrium state. Despite these similarities, discussion of Maxwell's Demon is absent in the literature on artificial membrane transport. By contrast, the emergence of rational design principles for nonequilibrium artificial molecular motors can trace its intellectual roots directly to this famous thought experiment. This perspective highlights the links between Maxwell's Demon and nonequilibrium machines, and argues that understanding the implications of this 19th century thought experiment is crucial to the future development of transmembrane active transport processes.

自发产生跨膜梯度是人工纳米技术的一个重要基础研究目标。产生这种梯度的主动传输过程直接反映了著名的麦克斯韦恶魔思想实验,即恶魔在两个腔室之间分隔粒子以产生非平衡态。尽管存在这些相似之处,但在有关人工膜传输的文献中却没有关于麦克斯韦恶魔的讨论。相比之下,非平衡人工分子马达的合理设计原则的出现可以直接追溯到这个著名的思想实验。这一观点强调了麦克斯韦妖与非平衡机器之间的联系,并认为理解这一 19 世纪思想实验的含义对于未来主动膜传输过程的发展至关重要。
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引用次数: 0
Nucleotide-Protocell Interactions: A Reciprocal Relationship in Prebiotically Pertinent Environments 核苷酸与原细胞的相互作用:前生物相关环境中的互惠关系
Pub Date : 2024-02-07 DOI: 10.1002/syst.202300031
Kshitij Deshpande, Nishant Nitinidhi Kulshreshtha, Sahil Sunil Mulewar, Dr. Sudha Rajamani

Spontaneous interactions between nucleotides and lipid membranes are likely to have played a prominent role in the emergence of life on Earth. However, the effect of nucleotides on the physicochemical properties of model protocellular membranes is relatively less understood. To this end, we aimed to discern the effect of canonical nucleotides on the properties of single-chain amphiphile membranes under prebiotically relevant conditions of multiple wet-dry cycles. Furthermore, the change in the critical aggregation concentration of the membranes and their stability in the presence of nucleotides was also investigated in astrobiologically relevant analogue environments. We report that different nucleotides, lipid headgroups, and the ionic makeup of the system affect lipid-nucleotide interactions, and these, in turn, modulate the effect of nucleotides on the membrane properties. Specifically, the presence of AMP, UMP, and CMP promoted self-assembly of oleic acid membranes and increased their stability against certain prebiotically relevant selection pressures. This study takes us a step towards an appreciable understanding of how nucleotides might have shaped the protocellular landscape of the prebiotic Earth.

核苷酸与脂膜之间的自发相互作用很可能在地球生命的出现过程中发挥了重要作用。然而,人们对核苷酸对模型原细胞膜理化性质的影响了解相对较少。为此,我们的目标是在多个干湿循环的前生物相关条件下,找出典型核苷酸对单链双亲膜性质的影响。此外,我们还在天体生物学相关的模拟环境中研究了核苷酸存在时膜临界聚集浓度的变化及其稳定性。我们报告说,不同的核苷酸、脂头基和系统的离子构成会影响脂质与核苷酸之间的相互作用,而这些反过来又会调节核苷酸对膜特性的影响。具体来说,AMP、UMP 和 CMP 的存在促进了油酸膜的自组装,并提高了它们在某些生物前相关选择压力下的稳定性。这项研究让我们对核苷酸如何塑造了前生物地球的原细胞景观有了进一步的了解。
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引用次数: 0
Time to Celebrate: 5 Years of ChemSystemsChem 是时候庆祝了:ChemSystemsChem成立5周年
Pub Date : 2024-01-12 DOI: 10.1002/syst.202300051
Dr. Deanne Nolan, Dr. Leana Travaglini

2024 marks the 5th anniversary of ChemSystemsChem! The editors celebrate this anniversary and share the latest initiatives and developments at the journal.

2024 年是 ChemSystemsChem 创刊五周年!编辑们庆祝了这一周年纪念,并分享了期刊的最新举措和发展。
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引用次数: 0
Polylysine-Coated Surfaces Drive Competition in Chemical Reaction Networks to Enable Molecular Information Processing 聚赖氨酸涂层表面推动化学反应网络竞争,实现分子信息处理
Pub Date : 2023-12-28 DOI: 10.1002/syst.202300052
A. Hazal Koyuncu, Dr. Jacopo Movilli, Dr. Sevil Sahin, Dmitrii V. Kriukov, Prof. Jurriaan Huskens, Dr. Albert S. Y. Wong

The front cover artwork is provided by the Chemical Reaction Network lab at the University of Twente. The image shows a microfluidic channel with multilayer polylysine surfaces, which provide the potential to bestow an acid-base equilibrium with the capacity of signal transduction. Read the full text of the Research Article at 10.1002/syst.202300030.

封面图片由屯特大学的化学反应网络实验室提供。图片显示的是一个具有多层聚赖氨酸表面的微流体通道,它具有赋予酸碱平衡以信号转导能力的潜力。阅读研究文章全文,请访问 10.1002/syst.202300030。
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引用次数: 0
期刊
ChemSystemsChem
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