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Easy, Rapid and High-Throughput Production of Single and Multicompartment Liposomes by Vortex Emulsification 漩涡乳化法简便、快速、高通量生产单室和多室脂质体
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-11-25 DOI: 10.1002/syst.202400085
Zhen-Hong Luo, Gong-Yu Shi, Nan-Nan Deng

Cell-sized liposomes, the self-assembled phospholipid vesicles with bilayer membranes, have garnered substantial attention across various fields, particularly as cell mimics. In this study, we introduce a simplified method for rapidly producing single- and multicompartment liposomes using a common laboratory vortex mixer. The simplicity of our method has the potential to greatly facilitate artificial cell and tissue-related research, potentially leading to broader applications of liposomes.

细胞大小的脂质体,具有双层膜的自组装磷脂囊泡,已经在各个领域获得了大量的关注,特别是作为细胞模拟物。在这项研究中,我们介绍了一种简化的方法,快速生产单室和多室脂质体使用常见的实验室涡旋混合器。我们方法的简单性有可能极大地促进人工细胞和组织相关的研究,有可能导致脂质体的更广泛应用。
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引用次数: 0
Front Cover: Photostimuli Reach a Selective Intermediate in a Microflow: One-Shot Transformation from a Supramolecular Co-Polymer to a Micro-Disk Structure (ChemSystemsChem 6/2024) 封面光刺激到达微流中的选择性中间体:从超分子共聚物到微盘结构的一次性转化(ChemSystemsChem 6/2024)
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-11-16 DOI: 10.1002/syst.202480601
Akira Kaneyoshi, Shota Nomura, Takato Maeda, Dr. Takahiro Kusukawa, Dr. Yoshihiro Kikkawa, Dr. Munenori Numata

In the Research Article by Munenori Numata and co-workers a dissipative self-assembly system powered by flow and light is demonstrated. Supramolecular co-polymerization and rolling-up from the forward polymer's end led to the creation of discrete micrometer-sized supramolecular architecture featuring both molecular-level inner complexity and long-range order over molecular scale.

Munenori Numata 及其合作者的研究文章展示了一个由流动和光驱动的耗散自组装系统。超分子共聚和从正向聚合物末端卷起的过程产生了离散的微米级超分子结构,这种结构既具有分子级的内部复杂性,又具有分子尺度的长程有序性。
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引用次数: 0
Interfacing Complex Coacervates with Natural Cells 复杂凝聚体与天然细胞的接合
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-11-15 DOI: 10.1002/syst.202400071
He Meng, Yanglimin Ji, Yan Qiao

Coacervates have been investigated as protocells or synthetic cells, as well as subcellular compartments for the creation of new materials, thus bridging the gap between living and non-living systems in materials science, synthetic biology, and bioengineering. Given the design flexibility and simplicity of coacervates, along with the functionality and complexity of natural cells, the interfacing of complex coacervates with natural cells is considered significant for various biotechnological and biomedical applications. In this review, the fundamental mechanisms and underlying theories of coacervate systems are introduced. Recent efforts to interface coacervates with natural cells are summarized in three key scenarios: (i) the integration of coacervates with natural cell components for the living material assembly into protocells; (ii) communication between therapeutic synthetic cells and natural cells for drug delivery and cell repair; and (iii) the formation of intracellular condensates for metabolic regulation, followed by the regulation of their phase transitions for pathological elucidation. Finally, the potential of coacervate-natural cell interfaces is discussed in the context of developing living/synthetic cell constructs, creating precise disease therapy strategies, and advancing programmable metabolic engineering networks.

凝聚体已被研究为原始细胞或合成细胞,以及用于创造新材料的亚细胞隔室,从而弥合了材料科学,合成生物学和生物工程中生命和非生命系统之间的差距。考虑到凝聚体的设计灵活性和简单性,以及天然细胞的功能和复杂性,复杂凝聚体与天然细胞的界面被认为对各种生物技术和生物医学应用具有重要意义。本文介绍了凝聚系统的基本机制和基本理论。近年来凝聚体与天然细胞结合的研究主要集中在三个方面:(i)凝聚体与天然细胞组分的结合,将活性物质组装成原始细胞;(ii)治疗性合成细胞和天然细胞之间进行药物传递和细胞修复的通讯;(iii)细胞内凝聚物的形成进行代谢调控,随后调控其相变进行病理阐释。最后,在开发活细胞/合成细胞结构、创建精确的疾病治疗策略和推进可编程代谢工程网络的背景下,讨论了聚簇-天然细胞界面的潜力。
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引用次数: 0
Designing and Controlling Transient Supramolecular Gels 瞬态超分子凝胶的设计与控制
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-11-05 DOI: 10.1002/syst.202400073
Emma L. Bowley, Simona Bianco, Fin Hallam Stewart, Chloe M. Wallace, Rebecca E. Ginesi, Alex S. Loch, Martin Rosenthal, Andrew J. Smith, Dave J. Adams

Supramolecular systems are often designed such that a steady state exists. However, the ability to design systems with pre-determined changes in state can lead to highly dynamic materials, with evolving supramolecular structures and adaptable material properties. This approach is of great interest from the perspective of designing adaptive systems as well as from a broader systems chemistry perspective. Here, we report how a transient system can be altered to access different mechanical properties and transitions by varying the trigger and temperature. The aging of these systems is also explored, as the networks continually evolve long past the common cut-off point of analysis of one day. We therefore provide new insights into the control of transient gels, as well as an understanding as to the underpinning supramolecular structures and how they evolve with time.

超分子系统在设计时通常存在一种稳定状态。然而,如果能够设计出预先确定状态变化的系统,就能制造出高度动态的材料,具有不断演化的超分子结构和适应性强的材料特性。无论是从设计自适应系统的角度,还是从更广泛的系统化学角度来看,这种方法都具有重大意义。在此,我们报告了如何通过改变触发器和温度来改变瞬态系统,从而获得不同的机械特性和转变。此外,我们还探讨了这些系统的老化问题,因为网络的持续演化早已超过了一天这一常见的分析临界点。因此,我们对瞬态凝胶的控制有了新的认识,并了解了超分子结构的基础及其如何随时间演变。
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引用次数: 0
Supramolecular Systems Chemistry Based on the Interplay Between Peptides and Porphyrins 基于多肽和卟啉相互作用的超分子系统化学
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-23 DOI: 10.1002/syst.202400068
Yue Fu, Lian Zhang, Xuehai Yan, Kai Liu

The functions of living organisms are emergent from networks of biomolecules. In this review, we discuss the creation of synthetic life-like systems based on the interplay of peptides and porphyrins in the supramolecular chemical systems. In particular, we focus on the spatiotemporal control of self-assembly processes, which allows for the development of hierarchical structures for biomimetic catalysis and adaptive dynamics for stimulus-responsive structural transformations. Notably, when operating in a nonequilibrium regime–characterized by kinetic traps, feedback loops, and dissipative conditions–the structural landscape expands and system-level properties emerge, including transient catalysis, metabolic self-replication, and Darwinian-like evolution. Controlling these systems at the biointerface would facilitate intelligent therapeutic interventions in the anti-tumor phototherapy. Supramolecular systems chemistry provides a valuable framework for exploring new physicochemical spaces of peptides and porphyrins, and may offer distinct advantages and extensive applications across diverse fields.

生物体的功能是由生物分子网络产生的。在这篇综述中,我们将讨论基于肽和卟啉在超分子化学体系中的相互作用而创建的合成类生命系统。我们尤其关注自组装过程的时空控制,这使得生物催化的分层结构和刺激响应结构转换的自适应动力学得以发展。值得注意的是,当在以动力学陷阱、反馈回路和耗散条件为特征的非平衡态下运行时,结构景观会扩大,并出现系统级特性,包括瞬时催化、新陈代谢自我复制和类似达尔文的进化。在生物界面控制这些系统将有助于在抗肿瘤光疗中进行智能治疗干预。超分子系统化学为探索肽和卟啉的新物理化学空间提供了一个宝贵的框架,并可能在不同领域提供独特的优势和广泛的应用。
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引用次数: 0
Shape Analysis of Biomimetic and Plasma Membrane Vesicles 仿生囊泡与质膜囊泡的形态分析
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-23 DOI: 10.1002/syst.202400052
Rajni Kudawla, Harshmeet Kaur, Tanmay Pandey, Tripta Bhatia

Giant membrane vesicles (GUVs) and Giant plasma membrane vesicles (GPMVs) are used as models to study membrane properties. We conducted a comparative study to examine how reducing the volume of vesicles with different lipid compositions, solution symmetries, solution asymmetries, and membrane charges affects their morphology. We used three-dimensional visualization techniques to study the shape of the vesicles. Although the vesicles may not be perfectly spherical, they exhibit some fluctuations in their shape. To understand these variations, we used confocal image stacks for visualization. Our experimental observations show that the membrane′s charge influences the deflation of the GUVs in the presence of trans-bilayer sugar asymmetries. The lipid bilayers of our GUVs have a uniform distribution of lipids in both leaflets, indicating no asymmetry in lipid composition. We induce trans-bilayer asymmetries by exposing each leaflet of the bilayer to different solution compositions. We also estimated and compared the deformation of GPMV extracted from HEK-293 cells with trans-bilayer buffer asymmetries and inherent leaflet compositional asymmetry with biomimetic membranes.

以巨膜囊泡(Giant membrane vesicles, GUVs)和巨质膜囊泡(Giant plasma membrane vesicles, GPMVs)为模型研究膜的性质。我们进行了一项比较研究,以研究减少具有不同脂质组成、溶液对称性、溶液不对称性和膜电荷的囊泡的体积如何影响它们的形态。我们使用三维可视化技术来研究囊泡的形状。虽然囊泡可能不是完美的球形,但它们在形状上表现出一些波动。为了理解这些变化,我们使用共聚焦图像堆栈进行可视化。我们的实验观察表明,在跨双层糖不对称存在的情况下,膜的电荷影响了guv的收缩。我们的guv的脂质双层在两个小叶中具有均匀的脂质分布,表明脂质组成不对称。我们通过将双层的每个小叶暴露于不同的溶液组成来诱导跨双层不对称。我们还估计并比较了从HEK-293细胞中提取的具有跨双层缓冲不对称和具有仿生膜的固有小叶组成不对称的GPMV的变形。
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引用次数: 0
Spatially Coded Transformations in Gradient-Dependent Protocell Morphogenesis 梯度依赖的原始细胞形态发生中的空间编码转换
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-22 DOI: 10.1002/syst.202400064
Shuqi Wu, Wei Ji, Mei Li, Stephen Mann, Liangfei Tian

Chemical gradients provide spatiotemporal signaling fields in various cellular processes, driving complex dynamic behaviours such as differentiation and spatial organization. Here we employ opposing gradients of two artificial morphogens (sodium dodecyl sulfate (SDS) and sodium phosphotungstate (polyoxometalate; POM)) to systematically investigate morphological differentiation in organized populations of coacervate microdroplet-based protocells. Using a matrix of 16 sets of counter-diffusive gradients, we classify the differentiated protocells into five phenotypes and encode their spontaneous organization into different spatially patterned protocell consortia using a 3-bit binary information system. We show that a predominant SDS gradient produces a diversity of differentiated phenotypes to generate complex spatially coded 2D protocell organizations. In contrast, a prevailing POM gradient decreases morphological differentiation, resulting in population homogenization. Our results improve our understanding of gradient concentration-dependent collective responses in synthetic microscale agents and provide a step to a new spatially resolved information encoding method with 3-bit binary outputs.

化学梯度在各种细胞过程中提供时空信号场,驱动复杂的动态行为,如分化和空间组织。在这里,我们采用了两种相反梯度的人工形态剂(十二烷基硫酸钠(SDS)和磷钨酸钠(多金属氧酸钠);POM))系统地研究凝聚微滴为基础的有组织的原始细胞群体的形态分化。利用由16组反扩散梯度组成的矩阵,我们将分化的原始细胞分为5种表型,并利用3位二进制信息系统将其自发组织编码为不同空间模式的原始细胞群体。我们表明,主要的SDS梯度产生分化表型的多样性,以产生复杂的空间编码二维原始细胞组织。相反,普遍存在的POM梯度降低了形态分化,导致种群同质化。我们的研究结果提高了我们对合成微尺度试剂中梯度浓度依赖的集体响应的理解,并为具有3位二进制输出的新的空间分辨信息编码方法提供了一步。
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引用次数: 0
The Role of Kinetic Asymmetry in Chemical and Thermodynamic Coupling 动力学不对称在化学和热力学耦合中的作用
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-15 DOI: 10.1002/syst.202400066
R. Dean Astumian

The input of energy can shift an isomerization reaction A⇌B away from equilibrium, but which way, in favor of A or in favor of B? The answer to this question lies in understanding kinetic asymmetry, a concept first discussed in the context of how energy from an oscillating or fluctuating perturbation can act in concert with a catalyst to drive a reaction away from equilibrium. The key theoretical result is the non-equilibrium pumping equality that generalizes the idea of the equilibrium constant to the non-equilibrium steady-state.

输入的能量可以使异构化反应A + B偏离平衡,但是哪一个方向,是偏向A还是偏向B?这个问题的答案在于理解动力学不对称,动力学不对称这个概念最初是在振荡或波动扰动的能量如何与催化剂协同作用以使反应偏离平衡的背景下讨论的。关键的理论结果是非平衡泵送方程,它将平衡常数的概念推广到非平衡稳态。
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引用次数: 0
A Pseudo-catalytic Network Motif for Thiol-based Chemical Reaction Networks 巯基化学反应网络的伪催化网络基序
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-14 DOI: 10.1002/syst.202400072
Ekaterina A. Zhigileva, Ilia A. Puchkin, Sergey N. Semenov

The construction of chemical reaction networks (CRNs) is a formidable challenge because of their holistic and nonlinear nature. One approach to constructing CRNs involves combining fragments with distinctive properties, known as network motifs. Thiol chemistry is widely used in the construction of CRNs, with motifs available for positive and negative feedback loops. However, a simple catalytic motif has been lacking. Here, we developed a pseudo-catalytic motif using the reaction between cystamine and organic thiocyanates, which operates through a nucleophilic chain mechanism. Although similar to thiol autocatalytic systems, this reaction does not involve a doubling of the number of thiol species at any stage. The reaction is high-yielding and produces 2-amino-2-thiazoline. Its pseudo-catalytic nature manifests itself in the nearly linear relationship between the reaction rate and the amount of free thiols added at the beginning of the reaction. We demonstrated that this reaction can be regulated by external, time-dependent thiol signals and integrated into larger CRNs. We believe that this system will be a valuable addition to thiol chemistry, enabling the construction of CRNs with interesting functionalities.

化学反应网络具有整体性和非线性的特点,对化学反应网络的构建提出了严峻的挑战。构建crn的一种方法是将具有独特特性的片段(称为网络基序)组合在一起。巯基化学广泛应用于crn的构建,其基序可用于正反馈和负反馈回路。然而,一个简单的催化基序一直缺乏。在这里,我们开发了一个伪催化基序,利用半胺和有机硫氰酸酯之间的反应,通过亲核链机制运作。虽然与硫醇自催化系统相似,但该反应在任何阶段都不涉及硫醇种类数量的加倍。该反应产率高,可生产2-氨基-2-噻唑啉。它的准催化性质表现在反应速率与反应开始时加入的游离硫醇的量呈近似线性关系。我们证明了这种反应可以通过外部的、时变的硫醇信号来调节,并整合到更大的crn中。我们相信,该系统将成为硫醇化学的一个有价值的补充,使构建具有有趣功能的crn成为可能。
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引用次数: 0
Non-Uniform Electric Field Manipulation of Chromogenic Peptide Amphiphile Assemblies 非均匀电场操纵显色肽两亲体组装
IF 3.1 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-09 DOI: 10.1002/syst.202400061
Kiara L. Lacy, Sujeung Lim, Emil M. Lundqvist, Yuyao Kuang, Harrison C. Jeong, Tayloria N. G. Adams, Herdeline Ann M. Ardoña

This work investigates the influence of dielectrophoretic forces on the structural features and the resulting aggregates of a chromogenic model system, peptide-diacetylene (D3GV-DA) amphiphiles. Here, we systematically investigate how non-uniform electric fields impact the (i) peptide-directed supramolecular assembly stage and (ii) topochemical photopolymerization stage of polydiacetylenes (PDAs) in a quadrupole-based dielectrophoresis (DEP) device, as well as the (iii) manipulation of D3GV-DA aggregates in a light-induced DEP (LiDEP) platform. The conformation-dependent chromatic phases of peptide-PDAs are utilized to probe the chain-level effect of DEP exposure after the supramolecular assembly or after the topochemical photopolymerization stage. Steady-state spectroscopic and microscopy analyses show that structural features such as the chirality and morphologies of peptidic 1-D nanostructures are mostly conserved upon DEP exposure, but applying mild, non-uniform fields at the self-assembly stage is sufficient for fine-tuning the chromatic phase ratio in peptide-PDAs and manipulating their aggregates via LiDEP. Overall, this work provides insights into how non-uniform electric fields offer a controllable approach to fine-tune or preserve the molecularly preset assembly order of DEP-responsive supramolecular or biopolymeric assemblies, as well as manipulate their aggregates using light projections, which have future implications for the precision fabrication of macromolecular systems with hierarchical structure-dependent function.

这项工作研究了介电泳力对显色模型系统肽-二乙炔(D3GV-DA)两亲体的结构特征和最终聚集体的影响。在这里,我们系统地研究了非均匀电场如何影响四极基dielectrophoresis (DEP)装置中聚二乙炔(pda)的(i)多肽定向超分子组装阶段和(ii)拓扑化学光聚合阶段,以及(iii)光诱导DEP (LiDEP)平台中D3GV-DA聚集体的操作。利用肽- pda的构象依赖色相来探测DEP暴露在超分子组装或拓扑化学光聚合阶段后的链水平效应。稳态光谱和显微镜分析表明,在DEP暴露下,肽一维纳米结构的手性和形态等结构特征大多是保守的,但在自组装阶段施加温和的非均匀场足以微调肽- pda的色相比,并通过LiDEP操纵它们的聚集体。总的来说,这项工作提供了关于非均匀电场如何提供一种可控方法来微调或保持deep响应超分子或生物聚合物组件的分子预设组装顺序,以及使用光投影操纵它们的聚集体的见解,这对具有分层结构依赖功能的大分子系统的精密制造具有未来的意义。
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引用次数: 0
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