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Host factor PLAC8 is required for pancreas infection by SARS-CoV-2. SARS-CoV-2 感染胰腺需要宿主因子 PLAC8。
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-02-03 DOI: 10.1038/s43856-025-00745-6
Lesly Ibargüen-González, Sandra Heller, Darío López-García, Hanna Dietenberger, Thomas Fe Barth, Patricia Gallego, Israel Fernández-Cadenas, Sayoa Alzate-Piñol, Catalina Crespí, Julieth A Mena-Guerrero, Eugenia Cisneros-Barroso, Alejandro P Ugalde, Gabriel Bretones, Charlotte Steenblock, Alexander Kleger, Marta L DeDiego, Carles Barceló

Background: Although COVID-19 initially caused great concern about respiratory symptoms, mounting evidence shows that also the pancreas is productively infected by SARS-CoV-2. However, the severity of pancreatic SARS-CoV-2 infection and its pathophysiology is still under debate. Here, we investigate the consequences of SARS-CoV-2 pancreatic infection and the role of the host factor Placenta-associated protein (PLAC8).

Methods: We analyze plasma levels of pancreatic enzymes and inflammatory markers in a retrospective cohort study of 120 COVID-19 patients distributed in 3 severity-stratified groups. We study the expression of SARS-CoV-2 and PLAC8 in the pancreas of deceased COVID-19 patients as well as in non-infected donors. We perform pseudovirus infection experiments in PLAC8 knock-out PDAC and human beta cell-derived cell lines and validate results with SARS-CoV-2 virus.

Results: We find that analysis of circulating pancreatic enzymes aid the stratification of patients according to COVID-19 severity and predicts outcomes. Interestingly, we find an association between PLAC8 expression and SARS-CoV-2 infection in postmortem analysis of COVID-19 patients both in the pancreas and in other bonafide SARS-CoV-2 target tissues. Functional experiments demonstrate the requirement of PLAC8 in SARS-CoV-2 pancreatic productive infection by pseudovirus and full SARS-CoV-2 infectious virus inoculum from Wuhan-1 and BA.1 strains. Finally, we observe an overlap between PLAC8 and SARS-CoV-2 immunoreactivities in the pancreas of deceased patients.

Conclusions: Our data indicate the human pancreas as a SARS-CoV-2 target with plausible signs of injury and demonstrate that the host factor PLAC8 is required for SARS-CoV-2 pancreatic infection, thus defining new target opportunities for COVID-19-associated pancreatic pathogenesis.

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引用次数: 0
Functional feature extraction and validation from twelve-lead electrocardiograms to identify atrial fibrillation.
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-02-02 DOI: 10.1038/s43856-025-00749-2
Wei Yang, Rajat Deo, Wensheng Guo

Background: Deep learning methods on standard, 12-lead electrocardiograms (ECG) have resulted in the ability to identify individuals at high-risk for the development of atrial fibrillation. However, the process remains a "black box" and does not help clinicians in understanding the electrocardiographic changes at an individual level. we propose a nonparametric feature extraction approach to identify features that are associated with the development of atrial fibrillation (AF).

Methods: We apply functional principal component analysis to the raw ECG tracings collected in the Chronic Renal Insufficiency Cohort (CRIC) study. We define and select the features using ECGs from participants enrolled in Phase I (2003-2008) of the study. Cox proportional hazards models are used to evaluate the association of selected ECG features and their changes with the incident risk of AF during study follow-up. The findings are then validated in ECGs from participants enrolled in Phase III (2013-2015).

Results: We identify four features that are related to the P-wave amplitude, QRS complex and ST segment. Both their initial measurement and 3-year changes are associated with the development of AF. In particular, one standard deviation in the 3-year decline of the P-wave amplitude is independently associated with a 29% increased risk of incident AF in the multivariable model (HR: 1.29, 95% CI: [1.16, 1.43]).

Conclusions: Compared with deep learning methods, our features are intuitive and can provide insights into the longitudinal ECG changes at an individual level that precede the development of AF.

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引用次数: 0
Accelerated symptom improvement in Parkinson's disease via remote internet-based optimization of deep brain stimulation therapy: a randomized controlled multicenter trial. 通过远程互联网优化脑深部刺激疗法加速改善帕金森病症状:随机对照多中心试验。
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-31 DOI: 10.1038/s43856-025-00744-7
Alireza Gharabaghi, Sergiu Groppa, Marta Navas-Garcia, Alfons Schnitzler, Laura Muñoz-Delgado, Vicky L Marshall, Jessica Karl, Lin Zhang, Ramiro Alvarez, Mary S Feldman, Michael J Soileau, Lan Luo, S Elizabeth Zauber, Benjamin L Walter, Chengyuan Wu, Hong Lei, Damian M Herz, Ming-Hua Chung, Yagna Pathak, Bram Blomme, Binith Cheeran, Corneliu Luca, Daniel Weiss

Background: Deep brain stimulation (DBS) has emerged as an important therapeutic intervention for neurological and neuropsychiatric disorders. After initial programming, clinicians are tasked with fine-tuning DBS parameters through repeated in-person clinic visits. We aimed to evaluate whether DBS patients achieve clinical benefit more rapidly by incorporating remote internet-based adjustment (RIBA) of stimulation parameters into the continuum of care.

Methods: We conducted a randomized controlled multicenter study (ClinicalTrails.gov NCT05269862) involving patients scheduled for de novo implantation with a DBS System to treat Parkinson's Disease. Eligibility criteria included the ability to incorporate RIBA as part of routine follow-up care. Ninety-six patients were randomly assigned in a 1:1 ratio using automated allocation, blocked into groups of 4, allocation concealed, and no stratification. After surgery and initial configuration of stimulation parameters, optimization of DBS settings occurred in the clinic alone (IC) or with additional access to RIBA. The primary outcome assessed differences in the average time to achieve a one-point improvement on the Patient Global Impression of Change score between groups. Patients, caregivers, and outcome assessors were not blinded to group assignment. Most of the data collection took place in the patient's home environment.

Results: Access to RIBA reduces the time to symptom improvement, with patients reporting 15.1 days faster clinical benefit (after 39.1 (SD 3.3) days in the RIBA group (n = 48) and after 54.2 (SD 3.7) days in the IC group (n = 48)). None of the reported adverse events are related to RIBA.

Conclusions: This study demonstrates safety and efficacy of internet-based adjustment of DBS therapy, while providing clinical benefit earlier than in-clinic optimization of stimulation parameters by increasing patient access to therapy adjustment.

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引用次数: 0
Publisher Correction: Survey of the risk behaviors and mental health of adolescents in Gabon.
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-30 DOI: 10.1038/s43856-025-00741-w
Joel Fleury Djoba Siawaya, Steeve Minto'o Rogombe, Mah Diawara, Rotimi Myrabelle Avome Houechenou, Nora Sylvana Efire Emagha, Zena Andrews, Lydie Armelle Moukambi, Anicet Christel Maloupazoa Siawaya, Amandine Mveang Nzoghe, Ofilia Mvoundza Ndjindji, Patrick Douada Mouguiama
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引用次数: 0
Preclinical use of a clinically-relevant scAAV9/SUMF1 vector for the treatment of multiple sulfatase deficiency.
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-27 DOI: 10.1038/s43856-025-00734-9
Maximiliano Presa, Rachel M Bailey, Somdatta Ray, Lauren Bailey, Saurabh Tata, Tara Murphy, Pierre-Alexandre Piec, Harold Combs, Steven J Gray, Cathleen Lutz

Background: Multiple Sulfatase Deficiency (MSD) is a rare inherited lysosomal storage disorder characterized by loss of function mutations in the SUMF1 gene that manifests as a severe pediatric neurological disease. There are no available targeted therapies for MSD.

Methods: We engineered a viral vector (AAV9/SUMF1) to deliver working copies of the SUMF1 gene and tested the vector in Sumf1 knock out mice that generally display a median lifespan of 10 days. Mice were injected as pre-symptomatic neonates via intracerebroventricular administration, or as post-symptomatic juveniles via intrathecal alone or combination intrathecal and intravenous delivery. Cohorts were assessed for survival, behavioral outcomes, and post-mortem for sulfatase activity.

Results: We show that treatment of neonates extends survival up to 1-year post-injection. Importantly, delivery of SUMF1 through cerebral spinal fluid at 7 days of age alleviates MSD symptoms. The treated mice show wide distribution of the SUMF1 gene, no signs of toxicity or neuropathy, improved vision and cardiac function, and no behavioral deficits. One-year post treatment, tissues show increased sulfatase activity, indicating functional SUMF1. Further, a GLP toxicology study conducted in rats demonstrates favorable overall safety of this approach.

Conclusions: These preclinical studies highlight the potential of our AAV9/SUMF1 vector, the design of which is directly translatable for clinical use, as a gene replacement therapy for MSD patients.

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引用次数: 0
Preclinical assessment of splicing modulation therapy for ABCA4 variant c.768G>T in Stargardt disease. ABCA4变异体c.768G >t剪接调节治疗Stargardt病的临床前评估
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-21 DOI: 10.1038/s43856-024-00712-7
Dyah W Karjosukarso, Femke Bukkems, Lonneke Duijkers, Tomasz Z Tomkiewicz, Julia Kiefmann, Andrei Sarlea, Sander Bervoets, Irene Vázquez-Domínguez, Laurie L Molday, Robert S Molday, Mihai G Netea, Carel B Hoyng, Alejandro Garanto, Rob W J Collin

Background: Stargardt disease type 1 (STGD1) is a progressive retinal disorder caused by bi-allelic variants in the ABCA4 gene. A recurrent variant at the exon-intron junction of exon 6, c.768G>T, causes a 35-nt elongation of exon 6 that leads to premature termination of protein synthesis.

Methods: To correct this aberrant splicing, twenty-five 2'-O-methoxyethyl antisense oligonucleotides (AONs) were designed, spanning the entire exon elongation.

Results: Testing of these AONs in patient-derived photoreceptor precursor cells and retinal organoids allow the selection of a lead candidate AON (A7 21-mer) that rescues on average 52% and 50% expression of wild-type ABCA4 transcript and protein, respectively. In situ hybridization and probe-based ELISA demonstrate its distribution and stability in vitro and in vivo. No major safety concerns regarding off-targets, immunostimulation and toxicity are observed in transcriptomics analysis, cytokine stimulation assays in human primary immune cells, and cytotoxicity assays.

Conclusions: Additional optimization and in vivo studies will be performed to further investigate the lead candidate. Considering the high prevalence of this variant, a substantial number of patients are likely to benefit from a successful further development and implementation of this therapy.

背景:Stargardt病1型(STGD1)是一种由ABCA4基因双等位基因变异引起的进行性视网膜疾病。在第6外显子的外显子-内含子连接处,c.768G>T的反复变异导致第6外显子35 nt的延伸,导致蛋白质合成的过早终止。方法:为了纠正这种异常剪接,设计了25个2'- o -甲氧基乙基反义寡核苷酸(AONs),覆盖整个外显子延伸。结果:在患者来源的光感受器前体细胞和视网膜类器官中测试这些AON,可以选择主要候选AON (A7 21-mer),平均分别挽救52%和50%野生型ABCA4转录物和蛋白质的表达。原位杂交和基于探针的酶联免疫吸附试验证实了其在体外和体内的分布和稳定性。在转录组学分析、人原代免疫细胞细胞因子刺激试验和细胞毒性试验中,未观察到脱靶、免疫刺激和毒性方面的主要安全性问题。结论:将进行进一步的优化和体内研究以进一步研究主要候选药物。考虑到这种变异的高流行率,大量患者可能会从这种疗法的成功进一步发展和实施中受益。
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引用次数: 0
Artificial neural network detection of pancreatic cancer from proton (1H) magnetic resonance spectroscopy patterns of plasma metabolites. 人工神经网络检测胰腺癌血浆代谢物质子(1H)磁共振谱图。
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-21 DOI: 10.1038/s43856-024-00727-0
Meiyappan Solaiyappan, Santosh Kumar Bharti, Raj Kumar Sharma, Mohamad Dbouk, Wasay Nizam, Malcolm V Brock, Michael G Goggins, Zaver M Bhujwalla

Background: Routine screening to detect silent but deadly cancers such as pancreatic ductal adenocarcinoma (PDAC) can significantly improve survival, creating an important need for a convenient screening test. High-resolution proton (1H) magnetic resonance spectroscopy (MRS) of plasma identifies circulating metabolites that can allow detection of cancers such as PDAC that have highly dysregulated metabolism.

Methods: We first acquired 1H MR spectra of human plasma samples classified as normal, benign pancreatic disease and malignant (PDAC). We next trained a system of artificial neural networks (ANNs) to process and discriminate these three classes using the full spectrum range and resolution of the acquired spectral data. We then identified and ranked spectral regions that played a salient role in the discrimination to provide interpretability of the results. We tested the accuracy of the ANN performance using blinded plasma samples.

Results: We show that our ANN approach yields, in a cross validation-based training of 170 samples, a sensitivity and a specificity of 100% for malignant versus non-malignant (normal and disease combined) discrimination. The trained ANNs achieve a sensitivity and specificity of 87.5% and 93.1% respectively (AUC: ROC = 0.931, P-R = 0.854), with 45 blinded plasma samples. Further, we show that the salient spectral regions of the ANN discrimination correspond to metabolites of known importance for their role in cancers.

Conclusions: Our results demonstrate that the ANN approach presented here can identify PDAC from 1H MR plasma spectra to provide a convenient plasma-based assay for population-level screening of PDAC. The ANN approach can be suitably expanded to detect other cancers with metabolic dysregulation.

背景:常规筛查检测无症状但致命的癌症,如胰腺导管腺癌(PDAC)可以显著提高生存率,因此需要一种方便的筛查试验。血浆的高分辨率质子(1H)磁共振波谱(MRS)识别循环代谢物,可以检测代谢高度失调的癌症,如PDAC。方法:首先获取正常、良性和恶性胰腺疾病(PDAC)的人血浆样品的1H MR谱。接下来,我们训练了一个人工神经网络(ann)系统,利用所获取的光谱数据的全光谱范围和分辨率来处理和区分这三类。然后,我们确定并对光谱区域进行排序,这些区域在识别中发挥了显著作用,以提供结果的可解释性。我们使用盲法血浆样本测试了人工神经网络性能的准确性。结果:我们表明,在170个样本的基于交叉验证的训练中,我们的人工神经网络方法在恶性与非恶性(正常和疾病结合)区分方面的灵敏度和特异性为100%。在45份盲法血浆样本中,训练的人工神经网络的灵敏度和特异性分别为87.5%和93.1% (AUC: ROC = 0.931, P-R = 0.854)。此外,研究人员还发现,神经网络识别的显著光谱区域对应于已知在癌症中起重要作用的代谢物。结论:我们的研究结果表明,本文提出的人工神经网络方法可以从1H MR等离子体光谱中识别PDAC,为PDAC的人群筛查提供了一种方便的基于血浆的检测方法。人工神经网络方法可以适当地扩展到检测其他代谢失调的癌症。
{"title":"Artificial neural network detection of pancreatic cancer from proton (1H) magnetic resonance spectroscopy patterns of plasma metabolites.","authors":"Meiyappan Solaiyappan, Santosh Kumar Bharti, Raj Kumar Sharma, Mohamad Dbouk, Wasay Nizam, Malcolm V Brock, Michael G Goggins, Zaver M Bhujwalla","doi":"10.1038/s43856-024-00727-0","DOIUrl":"10.1038/s43856-024-00727-0","url":null,"abstract":"<p><strong>Background: </strong>Routine screening to detect silent but deadly cancers such as pancreatic ductal adenocarcinoma (PDAC) can significantly improve survival, creating an important need for a convenient screening test. High-resolution proton (1H) magnetic resonance spectroscopy (MRS) of plasma identifies circulating metabolites that can allow detection of cancers such as PDAC that have highly dysregulated metabolism.</p><p><strong>Methods: </strong>We first acquired 1H MR spectra of human plasma samples classified as normal, benign pancreatic disease and malignant (PDAC). We next trained a system of artificial neural networks (ANNs) to process and discriminate these three classes using the full spectrum range and resolution of the acquired spectral data. We then identified and ranked spectral regions that played a salient role in the discrimination to provide interpretability of the results. We tested the accuracy of the ANN performance using blinded plasma samples.</p><p><strong>Results: </strong>We show that our ANN approach yields, in a cross validation-based training of 170 samples, a sensitivity and a specificity of 100% for malignant versus non-malignant (normal and disease combined) discrimination. The trained ANNs achieve a sensitivity and specificity of 87.5% and 93.1% respectively (AUC: ROC = 0.931, P-R = 0.854), with 45 blinded plasma samples. Further, we show that the salient spectral regions of the ANN discrimination correspond to metabolites of known importance for their role in cancers.</p><p><strong>Conclusions: </strong>Our results demonstrate that the ANN approach presented here can identify PDAC from 1H MR plasma spectra to provide a convenient plasma-based assay for population-level screening of PDAC. The ANN approach can be suitably expanded to detect other cancers with metabolic dysregulation.</p>","PeriodicalId":72646,"journal":{"name":"Communications medicine","volume":"5 1","pages":"24"},"PeriodicalIF":5.4,"publicationDate":"2025-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11751387/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143017365","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Vital signs-based healthcare kiosks for screening chronic and infectious diseases: a systematic review. 基于生命体征的慢性病和传染病筛查保健亭:系统评价。
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-21 DOI: 10.1038/s43856-025-00738-5
Saksham Bhutani, Aymen Alian, Richard Ribon Fletcher, Hagen Bomberg, Urs Eichenberger, Carlo Menon, Mohamed Elgendi

Background: Increasing demands, such as the COVID-19 pandemic, have presented substantial challenges to global healthcare systems, resulting in staff shortages and overcrowded emergency rooms. Health kiosks have emerged as a promising solution to improve overall efficiency and healthcare accessibility. However, although kiosks are commonly used worldwide for access to information and financial services, the health kiosk industry, valued at $800 million, accounts for just 1.9% of the $42 billion global kiosk market. This review aims to bridge the research-to-practice gap by examining the development of health kiosk technology from 2013 to 2023.

Methods: We conducted a systematic search across PubMed, IEEE Xplore, and Google Scholar databases, identifying 5,537 articles, with 36 studies meeting inclusion criteria for detailed analysis. We evaluated each study based on kiosk purpose, targeted diseases, measured vital signs, and user demographics, along with an assessment of limitations in participant selection and data reporting.

Results: The findings reveal that blood pressure is the most frequently measured vital sign, utilized in 34% of the studies. Furthermore, cardiovascular disease detection emerges as the primary motivation in 56% of the included studies. The United States, India, and the United Kingdom are notable contributors, accounting for 43% of the reviewed articles. Our assessment reveals considerable limitations in participant selection and data reporting in many studies. Additionally, several research gaps remain, including a lack of performance testing, user experience evaluation, clinical intervention, development standardization, and inadequate sanitization protocols.

Conclusions: This review highlights health kiosks' potential to ease the burden on healthcare system and expand accessibility. However, widespread adoption is hindered by technical, regulatory, and financial challenges. Addressing these barriers could enable health kiosks to play a greater role in early disease detection and healthcare delivery.

背景:诸如COVID-19大流行等不断增加的需求给全球卫生保健系统带来了重大挑战,导致工作人员短缺和急诊室人满为患。健康信息亭已成为提高整体效率和医疗服务可及性的一种有前景的解决方案。然而,尽管信息亭在全球范围内普遍用于获取信息和金融服务,但价值8亿美元的医疗信息亭行业仅占全球信息亭市场420亿美元的1.9%。本综述旨在通过研究2013年至2023年健康亭技术的发展来弥合研究与实践之间的差距。方法:我们在PubMed、IEEE explore和b谷歌Scholar数据库中进行了系统检索,确定了5537篇文章,其中36篇研究符合详细分析的纳入标准。我们根据kiosk的目的、目标疾病、测量的生命体征和用户人口统计数据,以及评估参与者选择和数据报告的局限性,对每项研究进行评估。结果:研究结果显示,血压是最常测量的生命体征,在34%的研究中使用。此外,在纳入的研究中,心血管疾病检测是56%的主要动机。美国、印度和英国是值得注意的贡献者,占审查文章的43%。我们的评估显示,许多研究在参与者选择和数据报告方面存在相当大的局限性。此外,还存在一些研究空白,包括缺乏性能测试、用户体验评估、临床干预、开发标准化和不充分的消毒方案。结论:本综述强调了健康亭在减轻医疗系统负担和扩大可及性方面的潜力。然而,广泛采用受到技术、监管和财务挑战的阻碍。解决这些障碍可以使卫生服务站在早期疾病检测和卫生保健提供方面发挥更大的作用。
{"title":"Vital signs-based healthcare kiosks for screening chronic and infectious diseases: a systematic review.","authors":"Saksham Bhutani, Aymen Alian, Richard Ribon Fletcher, Hagen Bomberg, Urs Eichenberger, Carlo Menon, Mohamed Elgendi","doi":"10.1038/s43856-025-00738-5","DOIUrl":"10.1038/s43856-025-00738-5","url":null,"abstract":"<p><strong>Background: </strong>Increasing demands, such as the COVID-19 pandemic, have presented substantial challenges to global healthcare systems, resulting in staff shortages and overcrowded emergency rooms. Health kiosks have emerged as a promising solution to improve overall efficiency and healthcare accessibility. However, although kiosks are commonly used worldwide for access to information and financial services, the health kiosk industry, valued at $800 million, accounts for just 1.9% of the $42 billion global kiosk market. This review aims to bridge the research-to-practice gap by examining the development of health kiosk technology from 2013 to 2023.</p><p><strong>Methods: </strong>We conducted a systematic search across PubMed, IEEE Xplore, and Google Scholar databases, identifying 5,537 articles, with 36 studies meeting inclusion criteria for detailed analysis. We evaluated each study based on kiosk purpose, targeted diseases, measured vital signs, and user demographics, along with an assessment of limitations in participant selection and data reporting.</p><p><strong>Results: </strong>The findings reveal that blood pressure is the most frequently measured vital sign, utilized in 34% of the studies. Furthermore, cardiovascular disease detection emerges as the primary motivation in 56% of the included studies. The United States, India, and the United Kingdom are notable contributors, accounting for 43% of the reviewed articles. Our assessment reveals considerable limitations in participant selection and data reporting in many studies. Additionally, several research gaps remain, including a lack of performance testing, user experience evaluation, clinical intervention, development standardization, and inadequate sanitization protocols.</p><p><strong>Conclusions: </strong>This review highlights health kiosks' potential to ease the burden on healthcare system and expand accessibility. However, widespread adoption is hindered by technical, regulatory, and financial challenges. Addressing these barriers could enable health kiosks to play a greater role in early disease detection and healthcare delivery.</p>","PeriodicalId":72646,"journal":{"name":"Communications medicine","volume":"5 1","pages":"28"},"PeriodicalIF":5.4,"publicationDate":"2025-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11751283/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143017310","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Current applications and challenges in large language models for patient care: a systematic review. 当前的应用和挑战在大语言模型的病人护理:系统回顾。
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-21 DOI: 10.1038/s43856-024-00717-2
Felix Busch, Lena Hoffmann, Christopher Rueger, Elon Hc van Dijk, Rawen Kader, Esteban Ortiz-Prado, Marcus R Makowski, Luca Saba, Martin Hadamitzky, Jakob Nikolas Kather, Daniel Truhn, Renato Cuocolo, Lisa C Adams, Keno K Bressem

Background: The introduction of large language models (LLMs) into clinical practice promises to improve patient education and empowerment, thereby personalizing medical care and broadening access to medical knowledge. Despite the popularity of LLMs, there is a significant gap in systematized information on their use in patient care. Therefore, this systematic review aims to synthesize current applications and limitations of LLMs in patient care.

Methods: We systematically searched 5 databases for qualitative, quantitative, and mixed methods articles on LLMs in patient care published between 2022 and 2023. From 4349 initial records, 89 studies across 29 medical specialties were included. Quality assessment was performed using the Mixed Methods Appraisal Tool 2018. A data-driven convergent synthesis approach was applied for thematic syntheses of LLM applications and limitations using free line-by-line coding in Dedoose.

Results: We show that most studies investigate Generative Pre-trained Transformers (GPT)-3.5 (53.2%, n = 66 of 124 different LLMs examined) and GPT-4 (26.6%, n = 33/124) in answering medical questions, followed by patient information generation, including medical text summarization or translation, and clinical documentation. Our analysis delineates two primary domains of LLM limitations: design and output. Design limitations include 6 second-order and 12 third-order codes, such as lack of medical domain optimization, data transparency, and accessibility issues, while output limitations include 9 second-order and 32 third-order codes, for example, non-reproducibility, non-comprehensiveness, incorrectness, unsafety, and bias.

Conclusions: This review systematically maps LLM applications and limitations in patient care, providing a foundational framework and taxonomy for their implementation and evaluation in healthcare settings.

背景:将大型语言模型(LLMs)引入临床实践有望改善患者教育和赋权,从而实现个性化医疗护理,拓宽医学知识的获取途径。尽管法学硕士很受欢迎,但在他们在病人护理中使用的系统化信息方面存在显著差距。因此,本系统综述旨在综合llm在患者护理中的应用现状和局限性。方法:我们系统地检索了5个数据库,检索了2022年至2023年间发表的关于llm患者护理的定性、定量和混合方法的文章。从4349份初始记录中,包括了29个医学专业的89项研究。使用混合方法评估工具2018进行质量评估。采用数据驱动的收敛合成方法,在Dedoose中使用自由逐行编码对法学硕士应用程序和限制进行专题合成。结果:我们发现,大多数研究调查了生成预训练变形器(GPT)-3.5 (53.2%, n = 66的124个不同的法学硕士)和GPT-4 (26.6%, n = 33/124)在回答医学问题,其次是患者信息生成,包括医学文本摘要或翻译,和临床文献。我们的分析描述了法学硕士限制的两个主要领域:设计和输出。设计限制包括6个二阶代码和12个三阶代码,例如缺乏医疗领域优化、数据透明度和可访问性问题;输出限制包括9个二阶代码和32个三阶代码,例如不可再现性、非全面性、不正确、不安全性和偏差。结论:本综述系统地描绘了法学硕士在患者护理中的应用和局限性,为其在医疗保健环境中的实施和评估提供了一个基本框架和分类。
{"title":"Current applications and challenges in large language models for patient care: a systematic review.","authors":"Felix Busch, Lena Hoffmann, Christopher Rueger, Elon Hc van Dijk, Rawen Kader, Esteban Ortiz-Prado, Marcus R Makowski, Luca Saba, Martin Hadamitzky, Jakob Nikolas Kather, Daniel Truhn, Renato Cuocolo, Lisa C Adams, Keno K Bressem","doi":"10.1038/s43856-024-00717-2","DOIUrl":"10.1038/s43856-024-00717-2","url":null,"abstract":"<p><strong>Background: </strong>The introduction of large language models (LLMs) into clinical practice promises to improve patient education and empowerment, thereby personalizing medical care and broadening access to medical knowledge. Despite the popularity of LLMs, there is a significant gap in systematized information on their use in patient care. Therefore, this systematic review aims to synthesize current applications and limitations of LLMs in patient care.</p><p><strong>Methods: </strong>We systematically searched 5 databases for qualitative, quantitative, and mixed methods articles on LLMs in patient care published between 2022 and 2023. From 4349 initial records, 89 studies across 29 medical specialties were included. Quality assessment was performed using the Mixed Methods Appraisal Tool 2018. A data-driven convergent synthesis approach was applied for thematic syntheses of LLM applications and limitations using free line-by-line coding in Dedoose.</p><p><strong>Results: </strong>We show that most studies investigate Generative Pre-trained Transformers (GPT)-3.5 (53.2%, n = 66 of 124 different LLMs examined) and GPT-4 (26.6%, n = 33/124) in answering medical questions, followed by patient information generation, including medical text summarization or translation, and clinical documentation. Our analysis delineates two primary domains of LLM limitations: design and output. Design limitations include 6 second-order and 12 third-order codes, such as lack of medical domain optimization, data transparency, and accessibility issues, while output limitations include 9 second-order and 32 third-order codes, for example, non-reproducibility, non-comprehensiveness, incorrectness, unsafety, and bias.</p><p><strong>Conclusions: </strong>This review systematically maps LLM applications and limitations in patient care, providing a foundational framework and taxonomy for their implementation and evaluation in healthcare settings.</p>","PeriodicalId":72646,"journal":{"name":"Communications medicine","volume":"5 1","pages":"26"},"PeriodicalIF":5.4,"publicationDate":"2025-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11751060/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143017372","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Modeling of magnetic vestibular stimulation experienced during high-field clinical MRI. 高场临床MRI对前庭磁刺激的模拟。
IF 5.4 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-01-21 DOI: 10.1038/s43856-024-00667-9
Ismael Arán-Tapia, Vicente Pérez-Muñuzuri, Alberto P Muñuzuri, Andrés Soto-Varela, Jorge Otero-Millan, Dale C Roberts, Bryan K Ward

Background: High-field magnetic resonance imaging (MRI) is a powerful diagnostic tool but can induce unintended physiological effects, such as nystagmus and dizziness, potentially compromising the comfort and safety of individuals undergoing imaging. These effects likely result from the Lorentz force, which arises from the interaction between the MRI's static magnetic field and electrical currents in the inner ear. Yet, the Lorentz force hypothesis fails to explain observed eye movement patterns in healthy adults fully. This study explores these effects and tests whether the Lorentz force hypothesis adequately explains magnetic vestibular stimulation.

Methods: We developed a mathematical model integrating computational fluid dynamics, fluid-structure interaction solvers, and magnetohydrodynamic equations to simulate the biomechanical response of the cristae ampullares. Using high-resolution micro-CT data of the human membranous labyrinth, we ensured anatomical accuracy. Experimental validation involved measuring horizontal, vertical, and torsional slow-phase eye movements in healthy subjects exposed to varying magnetic field intensities and head positions.

Results: Our model accurately replicates observed nystagmus patterns, predicting slow-phase eye velocities that match experimental data. Results indicate that Lorentz force-induced stimulation of individual cupulae explains variability in eye movements across different magnetic field intensities and head orientations.

Conclusions: This study empirically supports the Lorentz force hypothesis as a valid explanation for magnetic vestibular stimulation, offering new insights into the effects of high-field MRI on the vestibular system. These findings provide a foundation for future research and improved clinical practices.

背景:高场磁共振成像(MRI)是一种强大的诊断工具,但可能会引起意想不到的生理效应,如眼球震颤和头晕,潜在地影响接受成像的个体的舒适度和安全性。这些影响可能是由洛伦兹力引起的,这是由MRI的静态磁场和内耳电流之间的相互作用产生的。然而,洛伦兹力假说并不能完全解释在健康成人中观察到的眼动模式。本研究探讨了这些影响,并检验了洛伦兹力假说是否能充分解释前庭磁刺激。方法:我们建立了一个数学模型,结合计算流体力学、流固耦合求解和磁流体动力学方程来模拟壶腹嵴的生物力学响应。使用高分辨率显微ct数据的人膜迷路,我们确保解剖的准确性。实验验证包括测量暴露于不同磁场强度和头部位置的健康受试者的水平、垂直和扭转慢相眼球运动。结果:我们的模型准确地复制了观察到的眼球震颤模式,预测了与实验数据相符的慢相眼速度。结果表明,洛伦兹力诱导的个体丘状体刺激解释了不同磁场强度和头部方向下眼球运动的变异性。结论:本研究从经验上支持洛伦兹力假说作为前庭磁刺激的有效解释,为高场MRI对前庭系统的影响提供了新的见解。这些发现为今后的研究和改进临床实践提供了基础。
{"title":"Modeling of magnetic vestibular stimulation experienced during high-field clinical MRI.","authors":"Ismael Arán-Tapia, Vicente Pérez-Muñuzuri, Alberto P Muñuzuri, Andrés Soto-Varela, Jorge Otero-Millan, Dale C Roberts, Bryan K Ward","doi":"10.1038/s43856-024-00667-9","DOIUrl":"10.1038/s43856-024-00667-9","url":null,"abstract":"<p><strong>Background: </strong>High-field magnetic resonance imaging (MRI) is a powerful diagnostic tool but can induce unintended physiological effects, such as nystagmus and dizziness, potentially compromising the comfort and safety of individuals undergoing imaging. These effects likely result from the Lorentz force, which arises from the interaction between the MRI's static magnetic field and electrical currents in the inner ear. Yet, the Lorentz force hypothesis fails to explain observed eye movement patterns in healthy adults fully. This study explores these effects and tests whether the Lorentz force hypothesis adequately explains magnetic vestibular stimulation.</p><p><strong>Methods: </strong>We developed a mathematical model integrating computational fluid dynamics, fluid-structure interaction solvers, and magnetohydrodynamic equations to simulate the biomechanical response of the cristae ampullares. Using high-resolution micro-CT data of the human membranous labyrinth, we ensured anatomical accuracy. Experimental validation involved measuring horizontal, vertical, and torsional slow-phase eye movements in healthy subjects exposed to varying magnetic field intensities and head positions.</p><p><strong>Results: </strong>Our model accurately replicates observed nystagmus patterns, predicting slow-phase eye velocities that match experimental data. Results indicate that Lorentz force-induced stimulation of individual cupulae explains variability in eye movements across different magnetic field intensities and head orientations.</p><p><strong>Conclusions: </strong>This study empirically supports the Lorentz force hypothesis as a valid explanation for magnetic vestibular stimulation, offering new insights into the effects of high-field MRI on the vestibular system. These findings provide a foundation for future research and improved clinical practices.</p>","PeriodicalId":72646,"journal":{"name":"Communications medicine","volume":"5 1","pages":"27"},"PeriodicalIF":5.4,"publicationDate":"2025-01-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11751175/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143017381","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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