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Crystal structure of 1,2,3,4-tetra­hydro­isoquinolin-2-ium (2S,3S)-3-carb­oxy-2,3-di­hydroxy­propano­ate monohydrate 1,2,3,4-四氢-异喹啉-2-鎓 (2S,3S)-3- 碳氧-2,3-二羟基丙酸盐一水合物的晶体结构。
IF 0.5 Q4 CRYSTALLOGRAPHY Pub Date : 2024-06-01 DOI: 10.1107/S2056989024005711
Rüdiger W. Seidel , Tsonko M. Kolev , B. Therrien (Editor)

The crystal structure of 1,2,3,4-tetra­hydro­isoquinolin-2-ium (2S,3S)-3-carb­oxy-2,3- di­hydroxy­propano­ate monohydrate (ortho­rhom­bic crystal system, space group P212121, Z = 4) features an intricate two-dimensional hydrogen-bond network.

The crystal structure of 1,2,3,4-tetra­hydro­isoquinolin-2-ium (2S,3S)-3-carb­oxy-2,3-di­hydroxy­propano­ate monohydrate, C9H12N+·C4H5O6·H2O, at 115 K shows ortho­rhom­bic symmetry (space group P212121). The hydrogen tartrate anions and solvent water mol­ecules form an intricate diperiodic O—H⋯O hydrogen-bond network parallel to (001). The tetra­hydro­isoquinolinium cations are tethered to the anionic hydrogen-bonded layers through N—H⋯O hydrogen bonds. The crystal packing in the third direction is achieved through van der Waals contacts between the hydro­carbon tails of the tetra­hydro­isoquinolinium cations, resulting in hydro­phobic and hydro­philic regions in the crystal structure.

1,2,3,4-etra-hydro-isoquinolin-2-ium (2S,3S)-3-carb-oxy-2,3-di-hydroxy-propano-ate monohydrate, C9H12N+-C4H5O6 --H2O在115 K时的晶体结构显示出正室双对称性(空间群P212121)。酒石酸氢阴离子和溶剂水分子形成了与 (001) 平行的错综复杂的双周期 O-H⋯O 氢键网络。四氢异喹啉阳离子通过 N-H⋯O 氢键拴在阴离子氢键层上。第三方向上的晶体堆积是通过四氢异喹啉阳离子的氢碳尾部之间的范德华接触实现的,从而在晶体结构中形成疏水区和亲水区。
{"title":"Crystal structure of 1,2,3,4-tetra­hydro­isoquinolin-2-ium (2S,3S)-3-carb­oxy-2,3-di­hydroxy­propano­ate monohydrate","authors":"Rüdiger W. Seidel ,&nbsp;Tsonko M. Kolev ,&nbsp;B. Therrien (Editor)","doi":"10.1107/S2056989024005711","DOIUrl":"10.1107/S2056989024005711","url":null,"abstract":"<div><p>The crystal structure of 1,2,3,4-tetra­hydro­isoquinolin-2-ium (2<em>S</em>,3<em>S</em>)-3-carb­oxy-2,3- di­hydroxy­propano­ate monohydrate (ortho­rhom­bic crystal system, space group <em>P</em>2<sub>1</sub>2<sub>1</sub>2<sub>1</sub>, <em>Z</em> = 4) features an intricate two-dimensional hydrogen-bond network.</p></div><div><p>The crystal structure of 1,2,3,4-tetra­hydro­isoquinolin-2-ium (2<em>S</em>,3<em>S</em>)-3-carb­oxy-2,3-di­hydroxy­propano­ate monohydrate, C<sub>9</sub>H<sub>12</sub>N<sup>+</sup>·C<sub>4</sub>H<sub>5</sub>O<sub>6</sub><sup>−</sup>·H<sub>2</sub>O, at 115 K shows ortho­rhom­bic symmetry (space group <em>P</em>2<sub>1</sub>2<sub>1</sub>2<sub>1</sub>). The hydrogen tartrate anions and solvent water mol­ecules form an intricate diperiodic O—H⋯O hydrogen-bond network parallel to (001). The tetra­hydro­isoquinolinium cations are tethered to the anionic hydrogen-bonded layers through N—H⋯O hydrogen bonds. The crystal packing in the third direction is achieved through van der Waals contacts between the hydro­carbon tails of the tetra­hydro­isoquinolinium cations, resulting in hydro­phobic and hydro­philic regions in the crystal structure.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 7","pages":"Pages 763-766"},"PeriodicalIF":0.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11223702/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141554022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, crystal structure and Hirshfeld surface analysis of 1-[3-(2-oxo-3-phenyl-1,2-di­hydro­quinoxalin-1-yl)prop­yl]-3-phenyl-1,2-di­hydro­quinoxalin-2-one 1-[3-(2-氧代-3-苯基-1,2-二氢喹喔啉-1-基)丙基]-3-苯基-1,2-二氢喹喔啉-2-酮的合成、晶体结构和 Hirshfeld 表面分析
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004377
Nadeem Abad , Joel T. Mague , Abdulsalam Alsubari , El Mokhtar Essassi , Abdullah Yahya Abdullah Alzahrani , Youssef Ramli , L. Van Meervelt (Editor)

In the title compound, the di­hydro­quinoxaline units are both essentially planar and the dihedral angle between their mean planes is 64.82 (2)°. In the crystal, C—H⋯O hydrogen bonds form chains along the b-axis direction which are joined by π-stacking and C—H⋯π(ring) inter­actions into the full three-dimensional network structure.

In the title compound, C31H24N4O2, the di­hydro­quinoxaline units are both essentially planar with the dihedral angle between their mean planes being 64.82 (4)°. The attached phenyl rings differ significantly in their rotational orientations with respect to the di­hydro­quinoxaline planes. In the crystal, one set of C—H⋯O hydrogen bonds form chains along the b-axis direction, which are connected in pairs by a second set of C—H⋯O hydrogen bonds. Two sets of π-stacking inter­actions and C—H⋯π(ring) inter­actions join the double chains into the final three-dimensional structure.

在标题化合物 C31H24N4O2 中,二氢喹喔啉单元基本上都是平面的,其平均平面之间的二面角为 64.82 (4)°。附着的苯基环相对于二氢喹喔啉平面的旋转方向差异很大。在晶体中,一组 C-H...O 氢键沿 b 轴方向形成链,这些链通过第二组 C-H...O 氢键成对连接。两组 π 堆积相互作用和 C-H...π(环)相互作用将双链连接成最终的三维结构。
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引用次数: 0
Crystal structure and Hirshfeld surface analysis of 3,3′-[ethane-1,2-diylbis(­oxy)]bis­(5,5-di­methyl­cyclo­hex-2-en-1-one) including an unknown solvate 3,3'-[ethane-1,2-diylbis(-oxy)]bis-(5,5-di-methyl-cyclo-hex-2-en-1-one) 包括一种未知溶解物的晶体结构和 Hirshfeld 表面分析。
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004286
Nurlana D. Sadikhova , Mehmet Akkurt , Valeh M. Ismayilov , Niftali N. Yusubov , Khudayar I. Hasanov , Ajaya Bhattarai , X. Hao (Editor)

In the crystal, the mol­ecules are connected into dimers by C—H⋯O hydrogen bonds with

(8) ring motifs, forming zigzag ribbons along the b-axis direction.

The title mol­ecule, C18H26O4, consists of two symmetrical halves related by the inversion centre at the mid-point of the central –C—C– bond. The hexene ring adopts an envelope conformation. In the crystal, the mol­ecules are connected into dimers by C—H⋯O hydrogen bonds with R 2 2(8) ring motifs, forming zigzag ribbons along the b-axis direction. According to a Hirshfeld surface analysis, H⋯H (68.2%) and O⋯H/H⋯O (25.9%) inter­actions are the most significant contributors to the crystal packing. The contribution of some disordered solvent to the scattering was removed using the SQUEEZE routine [Spek (2015#). Acta Cryst. C71, 9–18] in PLATON. The solvent contribution was not included in the reported mol­ecular weight and density.

标题分子 C18H26O4 由两个对称的半环组成,它们通过位于中心-C-C 键中点的反转中心而联系在一起。己烯环采用包络构象。在晶体中,分子结构通过 C-H⋯O 氢键与 R 2 2(8)环图案连接成二聚体,沿 b 轴方向形成人字形带状。根据 Hirshfeld 表面分析,H⋯H(68.2%)和 O⋯H/H⋯O(25.9%)相互作用对晶体堆积的贡献最大。使用 PLATON 中的 SQUEEZE 例程[Spek(2015 ▸ ). Acta Cryst. C71, 9-18]消除了一些无序溶剂对散射的贡献。溶剂贡献未计入所报告的分子量和密度。
{"title":"Crystal structure and Hirshfeld surface analysis of 3,3′-[ethane-1,2-diylbis(­oxy)]bis­(5,5-di­methyl­cyclo­hex-2-en-1-one) including an unknown solvate","authors":"Nurlana D. Sadikhova ,&nbsp;Mehmet Akkurt ,&nbsp;Valeh M. Ismayilov ,&nbsp;Niftali N. Yusubov ,&nbsp;Khudayar I. Hasanov ,&nbsp;Ajaya Bhattarai ,&nbsp;X. Hao (Editor)","doi":"10.1107/S2056989024004286","DOIUrl":"10.1107/S2056989024004286","url":null,"abstract":"<div><p>In the crystal, the mol­ecules are connected into dimers by C—H⋯O hydrogen bonds with <figure><img></figure> (8) ring motifs, forming zigzag ribbons along the <em>b</em>-axis direction.</p></div><div><p>The title mol­ecule, C<sub>18</sub>H<sub>26</sub>O<sub>4</sub>, consists of two symmetrical halves related by the inversion centre at the mid-point of the central –C—C– bond. The hexene ring adopts an envelope conformation. In the crystal, the mol­ecules are connected into dimers by C—H⋯O hydrogen bonds with <em>R</em> <sup>2</sup> <sub>2</sub>(8) ring motifs, forming zigzag ribbons along the <em>b</em>-axis direction. According to a Hirshfeld surface analysis, H⋯H (68.2%) and O⋯H/H⋯O (25.9%) inter­actions are the most significant contributors to the crystal packing. The contribution of some disordered solvent to the scattering was removed using the SQUEEZE routine [Spek (2015<span>#</span>). <em>Acta Cryst</em>. C<strong>71</strong>, 9–18] in <em>PLATON</em>. The solvent contribution was not included in the reported mol­ecular weight and density.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 615-619"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151306/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282675","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis and crystal structure of the cluster (Et4N)[(Tp*)MoFe3S3(μ3-NSiMe3)(N3)3] (Et4N)[(Tp*)MoFe3S3(μ3-NSiMe3)(N3)3]团簇的合成与晶体结构。
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004833
Yue Li , Jia Wei , Jie Han , Xu-Dong Chen , S.-L. Zheng (Editor)

This type of heterometallic and heteroleptic single cubane cluster represents a typical example within the Mo–Fe–S cluster family, which may be a good reference for understanding the structure and function of the nitro­genase FeMo cofactor.

The title compound, tetra­ethyl­ammonium tri­azido­tri-μ3-sulfido-[μ3-(tri­methyl­sil­yl)aza­nediido][tris­(3,5-di­methyl­pyrazol-1-yl)hydro­borato]triiron(+2.33)molybdenum(IV), (C8H20N)[Fe3MoS3(C15H22BN6)(C3H9NSi)(N3)3] or (Et4N)[(Tp*)MoFe3S33-NSiMe3)(N3)3] [Tp* = tris­(3,5-di­methyl­pyrazol-1-yl)hydro­bor­ate(1−)], crystallizes as needle-like black crystals in space group P

. In this cluster, the Mo site is in a distorted octa­hedral coordination model, coordinating three N atoms on the Tp* ligand and three μ3-bridging S atoms in the core. The Fe sites are in a distorted tetra­hedral coordination model, coordinating two μ3-bridging S atoms, one μ3-bridging N atom from Me3SiN2−, and another N atom on the terminal azide ligand. This type of heterometallic and heteroleptic single cubane cluster represents a typical example within the Mo–Fe–S cluster family, which may be a good reference for understanding the structure and function of the nitro­genase FeMo cofactor. The residual electron density of disordered solvent mol­ecules in the void space could not be reasonably modeled, thus the SQUEEZE [Spek (2015). Acta Cryst. C71, 9–18] function was applied. The solvent contribution is not included in the reported mol­ecular weight and density.

标题化合物,四乙基-三叠氮基-三-μ3-硫代-[μ3-(三甲基硅基)氮杂二基][三-(3,5-二甲基吡唑-1-基)氢硼酸]三铁(+2.33)钼(IV),(C8H20N)[Fe3MoS3(C15H22BN6)(C3H9NSi)(N3)3]或(Et4N)[(Tp*)MoFe3S3(μ3-NSiMe3)(N3)3][Tp* = 三-(3,5-二甲基吡唑-1-基)氢硼酸酯(1-)],在空间群 P 中结晶为针状黑色晶体。在该晶簇中,Mo 位点呈扭曲的八面体配位模式,与 Tp* 配体上的三个 N 原子和核心中的三μ3 桥接 S 原子配位。铁的位点呈扭曲的四面体配位模式,与两个μ3 桥接的 S 原子、Me3SiN2- 的一个μ3 桥接的 N 原子以及末端叠氮配体上的另一个 N 原子配位。这类异金属和异极性单立方簇是 Mo-Fe-S 簇家族中的一个典型例子,可作为了解硝基激酶 FeMo 辅因子结构和功能的良好参考。空隙中无序溶剂分子小分子的残余电子密度无法合理建模,因此采用了 SQUEEZE [Spek (2015). Acta Cryst. C71, 9-18] 函数。报告的分子重量和密度不包括溶剂的贡献。
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引用次数: 0
Synthesis, crystal structure and Hirshfeld surface analysis of (3Z)-4-[(4-amino-1,2,5-oxa­diazol-3-yl)amino]-3-bromo-1,1,1-tri­fluoro­but-3-en-2-one (3Z)-4-[(4-amino-1,2,5-oxadiazol-3-yl)amino]-3-bromo-1,1,1-trifluorobut-3-en-2-one 的合成、晶体结构和 Hirshfeld 表面分析
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004080
Firudin I. Guseinov , Sevim Türktekin Çelikesir , Mehmet Akkurt , Viacheslav O. Ovsyannikov , Bogdan I. Ugrak , Oksana M. Lavrova , Aida I. Samigullina , Ajaya Bhattarai , B. Therrien (Editor)

In the crystal, mol­ecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an

(8) motif. The dimers are linked into layers parallel to the (10
) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π inter­actions connect the mol­ecules, forming a three-dimensional network.

In the title compound, C6H4BrF3N4O2, the oxa­diazole ring is essentially planar with a maximum deviation of 0.003 (2) Å. In the crystal, mol­ecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an R 2 2(8) motif. The dimers are linked into layers parallel to the (10

) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π inter­actions connect the mol­ecules, forming a three-dimensional network. The F atoms of the tri­fluoro­methyl group are disordered over two sites in a 0.515 (6): 0.485 (6) ratio. The inter­molecular inter­actions in the crystal structure were investigated and qu­anti­fied using Hirshfeld surface analysis.

在标题化合物 C6H4BrF3N4O2 中,恶二唑环基本上是平面的,最大偏差为 0.003 (2) Å。在晶体中,分子对通过 N-H...N 氢键连接,形成具有 R 2 2(8) 主题的二聚体。二聚体通过 N-H...O 氢键连接成平行于(10overline{4})平面的层。此外,C-O...π 和 C-Br...π 相互作用将分子连接起来,形成一个三维网络。三氟甲基的 F 原子以 0.515 (6):0.485 (6)。利用 Hirshfeld 表面分析法对晶体结构中的分子间相互作用进行了研究和量化。
{"title":"Synthesis, crystal structure and Hirshfeld surface analysis of (3Z)-4-[(4-amino-1,2,5-oxa­diazol-3-yl)amino]-3-bromo-1,1,1-tri­fluoro­but-3-en-2-one","authors":"Firudin I. Guseinov ,&nbsp;Sevim Türktekin Çelikesir ,&nbsp;Mehmet Akkurt ,&nbsp;Viacheslav O. Ovsyannikov ,&nbsp;Bogdan I. Ugrak ,&nbsp;Oksana M. Lavrova ,&nbsp;Aida I. Samigullina ,&nbsp;Ajaya Bhattarai ,&nbsp;B. Therrien (Editor)","doi":"10.1107/S2056989024004080","DOIUrl":"10.1107/S2056989024004080","url":null,"abstract":"<div><p>In the crystal, mol­ecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an <figure><img></figure> (8) motif. The dimers are linked into layers parallel to the (10 <figure><img></figure> ) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π inter­actions connect the mol­ecules, forming a three-dimensional network.</p></div><div><p>In the title compound, C<sub>6</sub>H<sub>4</sub>BrF<sub>3</sub>N<sub>4</sub>O<sub>2</sub>, the oxa­diazole ring is essentially planar with a maximum deviation of 0.003 (2) Å. In the crystal, mol­ecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an <em>R</em> <sup>2</sup> <sub>2</sub>(8) motif. The dimers are linked into layers parallel to the (10 <figure><img></figure> ) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π inter­actions connect the mol­ecules, forming a three-dimensional network. The F atoms of the tri­fluoro­methyl group are disordered over two sites in a 0.515 (6): 0.485 (6) ratio. The inter­molecular inter­actions in the crystal structure were investigated and qu­anti­fied using Hirshfeld surface analysis.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 582-585"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140991232","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure and Hirshfeld surface analysis of dimethyl 2-oxo-4-(pyridin-2-yl)-6-(thio­phen-2-yl)cyclo­hex-3-ene-1,3-di­carboxyl­ate 2-oxo-4-(pyridin-2-yl)-6-(thio-phen-2-yl)cyclo-hex-3-ene-1,3-di-carboxyl-ate 的晶体结构和 Hirshfeld 表面分析。
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004687
Farid N. Naghiyev , Victor N. Khrustalev , Mehmet Akkurt , Elnur Z. Huseynov , Ajaya Bhattarai , Ali N. Khalilov , İbrahim G. Mamedov , S.-L. Zheng (Editor)

In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π inter­actions connect the mol­ecules by forming layers parallel to the (010) plane.

In the title compound, C19H17NO5S, the cyclo­hexene ring adopts nearly an envelope conformation. In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π inter­actions connect the mol­ecules by forming layers parallel to the (010) plane. According to the Hirshfeld surface analysis, H⋯H (36.9%), O⋯H/H⋯O (31.0%), C⋯H/H⋯C (18.9%) and S⋯H/H⋯S (7.9%) inter­actions are the most significant contributors to the crystal packing.

在标题化合物 C19H17NO5S 中,环己烯环几乎呈包络构象。在晶体中,分子结构通过 C-H⋯O 氢键连接,形成三维网络。此外,C-H⋯π 相互作用通过形成平行于 (010) 平面的层来连接分子结构。根据 Hirshfeld 表面分析,H⋯H(36.9%)、O⋯H/H⋯O(31.0%)、C⋯H/H⋯C(18.9%)和 S⋯H/H⋯S(7.9%)相互作用对晶体堆积的贡献最大。
{"title":"Crystal structure and Hirshfeld surface analysis of dimethyl 2-oxo-4-(pyridin-2-yl)-6-(thio­phen-2-yl)cyclo­hex-3-ene-1,3-di­carboxyl­ate","authors":"Farid N. Naghiyev ,&nbsp;Victor N. Khrustalev ,&nbsp;Mehmet Akkurt ,&nbsp;Elnur Z. Huseynov ,&nbsp;Ajaya Bhattarai ,&nbsp;Ali N. Khalilov ,&nbsp;İbrahim G. Mamedov ,&nbsp;S.-L. Zheng (Editor)","doi":"10.1107/S2056989024004687","DOIUrl":"10.1107/S2056989024004687","url":null,"abstract":"<div><p>In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π inter­actions connect the mol­ecules by forming layers parallel to the (010) plane.</p></div><div><p>In the title compound, C<sub>19</sub>H<sub>17</sub>NO<sub>5</sub>S, the cyclo­hexene ring adopts nearly an envelope conformation. In the crystal, mol­ecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π inter­actions connect the mol­ecules by forming layers parallel to the (010) plane. According to the Hirshfeld surface analysis, H⋯H (36.9%), O⋯H/H⋯O (31.0%), C⋯H/H⋯C (18.9%) and S⋯H/H⋯S (7.9%) inter­actions are the most significant contributors to the crystal packing.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 654-658"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151323/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282676","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Crystal structure and Hirshfeld surface of a penta­amine­copper(II) complex with urea and chloride 五胺铜(II)与尿素和氯化物复合物的晶体结构和希尔施菲尔德表面。
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004298
Olivia D. Breen , Tony D. Keene , L. Suescun (Editor)

The title multi-component crystal, [Cu(NH3)5]Cl2·CO(NH2)2, was synthesized from a deep eutectic solvent to yield an unusual penta­amine­copper(II) complex. Hydrogen bonding takes place between chloride ions and both the penta­amine­copper ions and urea mol­ecules.

The reaction of copper(II) oxalate and hexa­methyl­ene­tetra­mine in a deep eutectic solvent made of urea and choline chloride produced crystals of penta­amine­copper(II) dichloride–urea (1/1), [Cu(NH3)5]Cl2·CO(NH2)2, which was characterized by single-crystal X-ray diffraction. The complex contains discrete penta­amine­copper(II) units in a square-based pyramidal geometry. The overall structure of the multi-component crystal is dictated by hydrogen bonding between urea mol­ecules and amine H atoms with chloride anions.

草酸铜(II)与六亚甲基烯四矿在尿素和氯化胆碱组成的深共晶溶剂中发生反应,生成了五胺铜(II)二氯化尿素(1/1)晶体,即[Cu(NH3)5]Cl2-CO2-CO(NH2)2,并通过单晶 X 射线衍射对其进行了表征。该复合物含有离散的五胺铜(II)单元,呈正方形金字塔几何结构。多组分晶体的整体结构是由脲分子和胺 H 原子与氯阴离子之间的氢键决定的。
{"title":"Crystal structure and Hirshfeld surface of a penta­amine­copper(II) complex with urea and chloride","authors":"Olivia D. Breen ,&nbsp;Tony D. Keene ,&nbsp;L. Suescun (Editor)","doi":"10.1107/S2056989024004298","DOIUrl":"10.1107/S2056989024004298","url":null,"abstract":"<div><p>The title multi-component crystal, [Cu(NH<sub>3</sub>)<sub>5</sub>]Cl<sub>2</sub>·CO(NH<sub>2</sub>)<sub>2</sub>, was synthesized from a deep eutectic solvent to yield an unusual penta­amine­copper(II) complex. Hydrogen bonding takes place between chloride ions and both the penta­amine­copper ions and urea mol­ecules.</p></div><div><p>The reaction of copper(II) oxalate and hexa­methyl­ene­tetra­mine in a deep eutectic solvent made of urea and choline chloride produced crystals of penta­amine­copper(II) dichloride–urea (1/1), [Cu(NH<sub>3</sub>)<sub>5</sub>]Cl<sub>2</sub>·CO(NH<sub>2</sub>)<sub>2</sub>, which was characterized by single-crystal X-ray diffraction. The complex contains discrete penta­amine­copper(II) units in a square-based pyramidal geometry. The overall structure of the multi-component crystal is dictated by hydrogen bonding between urea mol­ecules and amine H atoms with chloride anions.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 596-600"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151326/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282686","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis, crystal structure and thermal properties of a new polymorphic modification of diiso­thio­cyanato­tetra­kis­(4-methyl­pyridine)cobalt(II) 二异硫氰基四-(4-甲基吡啶)钴(II)新多晶型改性体的合成、晶体结构和热性能。
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004997
Christian Näther , Aleksej Jochim , T. Akitsu (Editor)

The crystal structure of title compound consists of discrete complexes in which the CoII cations are octa­hedrally coordinated to two terminally N-bonded thio­cyanate anions and four 4-methyl­pyridine coligands and represents a new polymorphic modification of Co(NCS)2(4-methyl­pyridine)4, which is already reported in the literature.

The title compound, [Co(NCS)2(C6H7N)4] or Co(NCS)2(4-methyl­pyridine)4, was prepared by the reaction of Co(NCS)2 with 4-methyl­pyridine in water and is isotypic to one of the polymorphs of Ni(NCS)2(4-methyl­pyridine)4 [Kerr & Williams (1977#). Acta Cryst. B33, 3589–3592 and Soldatov et al. (2004#). Cryst. Growth Des. 4, 1185–1194]. Comparison of the experimental X-ray powder pattern with that calculated from the single-crystal data proves that a pure phase has been obtained. The asymmetric unit consists of one CoII cation, two crystallographically independent thio­cyanate anions and four independent 4-meth­yl­pyridine ligands, all located in general positions. The CoII cations are sixfold coordinated to two terminally N-bonded thio­cyanate anions and four 4-methyl­pyridine coligands within slightly distorted octa­hedra. Between the complexes, a number of weak C—H⋯N and C—H⋯S contacts are found. This structure represent a polymorphic modification of Co(NCS)2(4-methyl­pyridine)4 already reported in the CCD [Harris et al. (2003#). NASA Technical Reports, 211890]. In contrast to this form, the crystal structure of the new polymorph shows a denser packing, indicating that it is thermodynamically stable at least at low temperatures. Thermogravimetric and differential thermoanalysis reveal that the title compound starts to decomposes at about 100°C and that the coligands are removed in separate steps without any sign of a polymorphic transition before decomposition.

标题化合物[Co(NCS)2(C6H7N)4]或 Co(NCS)2(4-甲基吡啶)4 是通过 Co(NCS)2 与 4-甲基吡啶在水中的反应制备的,与 Ni(NCS)2(4-甲基吡啶)4 的一种多晶型[Kerr & Williams (1977 ▸).Acta Cryst.B33,3589-3592 和 Soldatov 等人(2004 ▸)。Cryst.Growth Des.4, 1185-1194].将实验 X 射线粉末图样与单晶数据计算出的图样进行比较,证明得到的是一种纯相。不对称单元由一个 CoII 阳离子、两个晶体学上独立的硫代氰酸阴离子和四个独立的 4-甲基吡啶配体组成,所有配体都位于一般位置。CoII 阳离子与两个末端 N 键的硫代氰酸阴离子和四个 4-甲基吡啶配体在略微畸变的八面体内进行六配位。在这些配合物之间,发现了一些微弱的 C-H⋯N 和 C-H⋯S 接触。这种结构是已在 CCD 中报道过的 Co(NCS)2(4-甲基吡啶)4 的多晶型修饰[Harris 等人 (2003 ▸). NASA 技术报告,211890]。与这种形态相比,新的多晶体的晶体结构显示出更致密的堆积,表明它至少在低温下是热力学稳定的。热重分析和差热分析显示,标题化合物在约 100°C 时开始分解,并且在分解前没有任何多晶型转变的迹象。
{"title":"Synthesis, crystal structure and thermal properties of a new polymorphic modification of diiso­thio­cyanato­tetra­kis­(4-methyl­pyridine)cobalt(II)","authors":"Christian Näther ,&nbsp;Aleksej Jochim ,&nbsp;T. Akitsu (Editor)","doi":"10.1107/S2056989024004997","DOIUrl":"10.1107/S2056989024004997","url":null,"abstract":"<div><p>The crystal structure of title compound consists of discrete complexes in which the Co<sup>II</sup> cations are octa­hedrally coordinated to two terminally N-bonded thio­cyanate anions and four 4-methyl­pyridine coligands and represents a new polymorphic modification of Co(NCS)<sub>2</sub>(4-methyl­pyridine)<sub>4</sub>, which is already reported in the literature.</p></div><div><p>The title compound, [Co(NCS)<sub>2</sub>(C<sub>6</sub>H<sub>7</sub>N)<sub>4</sub>] or Co(NCS)<sub>2</sub>(4-methyl­pyridine)<sub>4</sub>, was prepared by the reaction of Co(NCS)<sub>2</sub> with 4-methyl­pyridine in water and is isotypic to one of the polymorphs of Ni(NCS)<sub>2</sub>(4-methyl­pyridine)<sub>4</sub> [Kerr &amp; Williams (1977<span>#</span>). <em>Acta Cryst.</em> B<strong>33</strong>, 3589–3592 and Soldatov <em>et al.</em> (2004<span>#</span>). <em>Cryst. Growth Des.</em> <strong>4</strong>, 1185–1194]. Comparison of the experimental X-ray powder pattern with that calculated from the single-crystal data proves that a pure phase has been obtained. The asymmetric unit consists of one Co<sup>II</sup> cation, two crystallographically independent thio­cyanate anions and four independent 4-meth­yl­pyridine ligands, all located in general positions. The Co<sup>II</sup> cations are sixfold coordinated to two terminally N-bonded thio­cyanate anions and four 4-methyl­pyridine coligands within slightly distorted octa­hedra. Between the complexes, a number of weak C—H⋯N and C—H⋯S contacts are found. This structure represent a polymorphic modification of Co(NCS)<sub>2</sub>(4-methyl­pyridine)<sub>4</sub> already reported in the CCD [Harris <em>et al.</em> (2003<span>#</span>). <em>NASA Technical Reports</em>, 211890]. In contrast to this form, the crystal structure of the new polymorph shows a denser packing, indicating that it is thermodynamically stable at least at low temperatures. Thermogravimetric and differential thermoanalysis reveal that the title compound starts to decomposes at about 100°C and that the coligands are removed in separate steps without any sign of a polymorphic transition before decomposition.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 677-681"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151321/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282693","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Structural characterization of the supra­molecular complex between a tetra­quinoxaline-based cavitand and benzo­nitrile 基于四喹喔啉的空穴剂与苯甲腈之间的超分子复合物的结构特征。
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S205698902400481X
Roberta Pinalli , Chiara Massera , J. M. Delgado (Editor)

The 2:1 supra­molecular complex between a tetra­quinoxaline-based cavitand and benzo­nitrile as a guest has been studied through X-ray diffraction analysis. One of the benzo­nitrile mol­ecules in engulfed inside the macrocycle.

The structural characterization is reported of the supra­molecular complex between the tetra­quinoxaline-based cavitand 2,8,14,20-tetra­hexyl-6,10:12,16:18,22:24,4-O,O′-tetra­kis­(quinoxaline-2,3-di­yl)calix[4]resorcinarene (QxCav) with benzo­nitrile. The complex, of general formula C84H80N8O8·2C7H5N, crystallizes in the space group P

with two independent mol­ecules in the asymmetric unit, displaying very similar geometrical parameters. For each complex, one of the benzo­nitrile mol­ecules is engulfed inside the cavity, while the other is located among the alkyl legs at the lower rim. The host and the guests mainly inter­act through weak C—H⋯π, C—H⋯N and dispersion inter­actions. These inter­actions help to consolidate the formation of supra­molecular chains running along the crystallographic b-axis direction.

报告了以四喹喔啉为基础的空穴和 2,8,14,20-etra-hexyl-6,10:12,16:18,22:24,4-O,O'-tetra-kis-(quinoxaline-2,3-di-yl)calix[4]resorcinarene (QxCav) 与苯甲腈之间的超分子复合物的结构特征。通式为 C84H80N8O8-2C7H5N 的复合物在 P 空间群中结晶,不对称单元中有两个独立的分子胚珠,显示出非常相似的几何参数。在每个复合物中,一个苯腈分子胚珠被吞噬在空腔内,而另一个则位于下缘的烷基支链中。宿主和客体主要通过微弱的 C-H⋯π、C-H⋯N 和色散作用发生相互作用。这些相互作用有助于巩固沿晶体学 b 轴方向的超分子链的形成。
{"title":"Structural characterization of the supra­molecular complex between a tetra­quinoxaline-based cavitand and benzo­nitrile","authors":"Roberta Pinalli ,&nbsp;Chiara Massera ,&nbsp;J. M. Delgado (Editor)","doi":"10.1107/S205698902400481X","DOIUrl":"10.1107/S205698902400481X","url":null,"abstract":"<div><p>The 2:1 supra­molecular complex between a tetra­quinoxaline-based cavitand and benzo­nitrile as a guest has been studied through X-ray diffraction analysis. One of the benzo­nitrile mol­ecules in engulfed inside the macrocycle.</p></div><div><p>The structural characterization is reported of the supra­molecular complex between the tetra­quinoxaline-based cavitand 2,8,14,20-tetra­hexyl-6,10:12,16:18,22:24,4-<em>O</em>,<em>O</em>′-tetra­kis­(quinoxaline-2,3-di­yl)calix[4]resorcinarene (<strong>QxCav</strong>) with benzo­nitrile. The complex, of general formula C<sub>84</sub>H<sub>80</sub>N<sub>8</sub>O<sub>8</sub>·2C<sub>7</sub>H<sub>5</sub>N, crystallizes in the space group <em>P</em> <figure><img></figure> with two independent mol­ecules in the asymmetric unit, displaying very similar geometrical parameters. For each complex, one of the benzo­nitrile mol­ecules is engulfed inside the cavity, while the other is located among the alkyl legs at the lower rim. The host and the guests mainly inter­act through weak C—H⋯π, C—H⋯N and dispersion inter­actions. These inter­actions help to consolidate the formation of supra­molecular chains running along the crystallographic <em>b-</em>axis direction.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 671-676"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151304/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis and crystal structures of three organoplatinum(II) complexes bearing natural aryl­olefin and quinoline derivatives 含有天然芳基烯烃和喹啉衍生物的三种有机铂(II)配合物的合成和晶体结构
Q4 CRYSTALLOGRAPHY Pub Date : 2024-05-01 DOI: 10.1107/S2056989024004572
Nguyen Thi Thanh Chi , Pham Van Thong , Nguyen Manh Thang , Pham Ngoc Thao , Luc Van Meervelt , S. Parkin (Editor)

The synthesis and crystal structures of three organoplatinum(II) complexes bearing natural aryl­olefin and quinoline derivatives are reported.

Three organoplatinum(II) complexes bearing natural aryl­olefin and quinoline derivatives, namely, [4-meth­oxy-5-(2-meth­oxy-2-oxoeth­oxy)-2-(prop-2-en-1-yl)phen­yl](quinolin-8-olato)platinum(II), [Pt(C13H15O4)(C9H6NO)], (I), [4-meth­oxy-5-(2-oxo-2-propoxyeth­oxy)-2-(prop-2-en-1-yl)phen­yl](quinoline-2-carboxy­l­ato)platinum(II), [Pt(C15H19O4)(C10H6NO2)], (II), and chlorido­[4-meth­oxy-5-(2-oxo-2-propoxyeth­oxy)-2-(prop-2-en-1-yl)phen­yl](quinoline)­plat­inum(II), [Pt(C15H19O4)Cl(C9H7N)], (III), were synthesized and structurally characterized by IR and 1H NMR spectroscopy, and by single-crystal X-ray diffraction. The results showed that the cyclo­platinated aryl­olefin coordinates with PtII via the carbon atom of the phenyl ring and the C=Colefinic group. The deprotonated 8-hy­droxy­quinoline (C9H6NO) and quinoline-2-carb­oxy­lic acid (C10H6NO2) coordinate with the PtII atom via the N and O atoms in complexes (I) and (II) while the quinoline (C9H7N) coordinates via the N atom in (III). Moreover, the coordinating N atom in complexes (I)–(III) is in the cis position compared to the C=Colefinic group. The crystal packing is characterized by C—H⋯π, C—H⋯O [for (II) and (III)], C—H⋯Cl [for (III) and π–π [for (I)] inter­actions.

三种含天然芳基烯烃和喹啉衍生物的有机铂(II)配合物,即[4-甲氧基-5-(2-甲氧基-2-氧代乙氧基)-2-(丙-2-烯-1-基)苯基](喹啉-8-醇)铂(II)、铂(C13H15O4)(C9H6NO)],(I),[4-甲氧基-5-(2-氧代-2-丙氧基乙氧基)-2-(丙-2-烯-1-基)苯基](喹啉-2-羧基)铂(II)、合成了[Pt(C15H19O4)(C10H6NO2)](II)和氯[4-甲氧基-5-(2-氧代-2-丙氧基乙氧基)-2-(丙-2-烯-1-基)苯基](喹啉)铂(II)[Pt(C15H19O4)Cl(C9H7N)](III)。结果表明,环铂化芳基烯烃通过苯基环的碳原子和 C= 烯基与 PtII 配位。在配合物(I)和(II)中,去质子化的 8-羟基喹啉(C9H6NO)和喹啉-2-羧酸(C10H6NO2)通过 N 原子和 O 原子与 PtII 原子配位,而在(III)中,喹啉(C9H7N)通过 N 原子配位。此外,与 C= 烯基相比,配合物 (I)-(III) 中的配位 N 原子处于顺式位置。晶体结构的特点是 C-H...π、C-H...O [对于 (II) 和 (III)]、C-H...Cl [对于 (III)] 和 π-π [对于 (I)] 相互作用。
{"title":"Synthesis and crystal structures of three organoplatinum(II) complexes bearing natural aryl­olefin and quinoline derivatives","authors":"Nguyen Thi Thanh Chi ,&nbsp;Pham Van Thong ,&nbsp;Nguyen Manh Thang ,&nbsp;Pham Ngoc Thao ,&nbsp;Luc Van Meervelt ,&nbsp;S. Parkin (Editor)","doi":"10.1107/S2056989024004572","DOIUrl":"10.1107/S2056989024004572","url":null,"abstract":"<div><p>The synthesis and crystal structures of three organoplatinum(II) complexes bearing natural aryl­olefin and quinoline derivatives are reported.</p></div><div><p>Three organoplatinum(II) complexes bearing natural aryl­olefin and quinoline derivatives, namely, [4-meth­oxy-5-(2-meth­oxy-2-oxoeth­oxy)-2-(prop-2-en-1-yl)phen­yl](quinolin-8-olato)platinum(II), [Pt(C<sub>13</sub>H<sub>15</sub>O<sub>4</sub>)(C<sub>9</sub>H<sub>6</sub>NO)], (<strong>I</strong>), [4-meth­oxy-5-(2-oxo-2-propoxyeth­oxy)-2-(prop-2-en-1-yl)phen­yl](quinoline-2-carboxy­l­ato)platinum(II), [Pt(C<sub>15</sub>H<sub>19</sub>O<sub>4</sub>)(C<sub>10</sub>H<sub>6</sub>NO<sub>2</sub>)], (<strong>II</strong>), and chlorido­[4-meth­oxy-5-(2-oxo-2-propoxyeth­oxy)-2-(prop-2-en-1-yl)phen­yl](quinoline)­plat­inum(II), [Pt(C<sub>15</sub>H<sub>19</sub>O<sub>4</sub>)Cl(C<sub>9</sub>H<sub>7</sub>N)], (<strong>III</strong>), were synthesized and structurally characterized by IR and <sup>1</sup>H NMR spectroscopy, and by single-crystal X-ray diffraction. The results showed that the cyclo­platinated aryl­olefin coordinates with Pt<sup>II</sup> <em>via</em> the carbon atom of the phenyl ring and the C=C<sub>olefinic</sub> group. The deprotonated 8-hy­droxy­quinoline (C<sub>9</sub>H<sub>6</sub>NO) and quinoline-2-carb­oxy­lic acid (C<sub>10</sub>H<sub>6</sub>NO<sub>2</sub>) coordinate with the Pt<sup>II</sup> atom <em>via</em> the N and O atoms in complexes (<strong>I</strong>) and (<strong>II</strong>) while the quinoline (C<sub>9</sub>H<sub>7</sub>N) coordinates <em>via</em> the N atom in (<strong>III</strong>). Moreover, the coordinating N atom in complexes (<strong>I</strong>)–(<strong>III</strong>) is in the <em>cis</em> position compared to the C=C<sub>olefinic</sub> group. The crystal packing is characterized by C—H⋯π, C—H⋯O [for (<strong>II</strong>) and (<strong>III</strong>)], C—H⋯Cl [for (<strong>III</strong>) and π–π [for (<strong>I</strong>)] inter­actions.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 630-635"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141118423","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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Acta Crystallographica Section E: Crystallographic Communications
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