Pub Date : 2024-06-01DOI: 10.1107/S2056989024005711
Rüdiger W. Seidel , Tsonko M. Kolev , B. Therrien (Editor)
The crystal structure of 1,2,3,4-tetrahydroisoquinolin-2-ium (2S,3S)-3-carboxy-2,3- dihydroxypropanoate monohydrate (orthorhombic crystal system, space group P212121, Z = 4) features an intricate two-dimensional hydrogen-bond network.
The crystal structure of 1,2,3,4-tetrahydroisoquinolin-2-ium (2S,3S)-3-carboxy-2,3-dihydroxypropanoate monohydrate, C9H12N+·C4H5O6−·H2O, at 115 K shows orthorhombic symmetry (space group P212121). The hydrogen tartrate anions and solvent water molecules form an intricate diperiodic O—H⋯O hydrogen-bond network parallel to (001). The tetrahydroisoquinolinium cations are tethered to the anionic hydrogen-bonded layers through N—H⋯O hydrogen bonds. The crystal packing in the third direction is achieved through van der Waals contacts between the hydrocarbon tails of the tetrahydroisoquinolinium cations, resulting in hydrophobic and hydrophilic regions in the crystal structure.
{"title":"Crystal structure of 1,2,3,4-tetrahydroisoquinolin-2-ium (2S,3S)-3-carboxy-2,3-dihydroxypropanoate monohydrate","authors":"Rüdiger W. Seidel , Tsonko M. Kolev , B. Therrien (Editor)","doi":"10.1107/S2056989024005711","DOIUrl":"10.1107/S2056989024005711","url":null,"abstract":"<div><p>The crystal structure of 1,2,3,4-tetrahydroisoquinolin-2-ium (2<em>S</em>,3<em>S</em>)-3-carboxy-2,3- dihydroxypropanoate monohydrate (orthorhombic crystal system, space group <em>P</em>2<sub>1</sub>2<sub>1</sub>2<sub>1</sub>, <em>Z</em> = 4) features an intricate two-dimensional hydrogen-bond network.</p></div><div><p>The crystal structure of 1,2,3,4-tetrahydroisoquinolin-2-ium (2<em>S</em>,3<em>S</em>)-3-carboxy-2,3-dihydroxypropanoate monohydrate, C<sub>9</sub>H<sub>12</sub>N<sup>+</sup>·C<sub>4</sub>H<sub>5</sub>O<sub>6</sub><sup>−</sup>·H<sub>2</sub>O, at 115 K shows orthorhombic symmetry (space group <em>P</em>2<sub>1</sub>2<sub>1</sub>2<sub>1</sub>). The hydrogen tartrate anions and solvent water molecules form an intricate diperiodic O—H⋯O hydrogen-bond network parallel to (001). The tetrahydroisoquinolinium cations are tethered to the anionic hydrogen-bonded layers through N—H⋯O hydrogen bonds. The crystal packing in the third direction is achieved through van der Waals contacts between the hydrocarbon tails of the tetrahydroisoquinolinium cations, resulting in hydrophobic and hydrophilic regions in the crystal structure.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 7","pages":"Pages 763-766"},"PeriodicalIF":0.5,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11223702/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141554022","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004377
Nadeem Abad , Joel T. Mague , Abdulsalam Alsubari , El Mokhtar Essassi , Abdullah Yahya Abdullah Alzahrani , Youssef Ramli , L. Van Meervelt (Editor)
In the title compound, the dihydroquinoxaline units are both essentially planar and the dihedral angle between their mean planes is 64.82 (2)°. In the crystal, C—H⋯O hydrogen bonds form chains along the b-axis direction which are joined by π-stacking and C—H⋯π(ring) interactions into the full three-dimensional network structure.
In the title compound, C31H24N4O2, the dihydroquinoxaline units are both essentially planar with the dihedral angle between their mean planes being 64.82 (4)°. The attached phenyl rings differ significantly in their rotational orientations with respect to the dihydroquinoxaline planes. In the crystal, one set of C—H⋯O hydrogen bonds form chains along the b-axis direction, which are connected in pairs by a second set of C—H⋯O hydrogen bonds. Two sets of π-stacking interactions and C—H⋯π(ring) interactions join the double chains into the final three-dimensional structure.
{"title":"Synthesis, crystal structure and Hirshfeld surface analysis of 1-[3-(2-oxo-3-phenyl-1,2-dihydroquinoxalin-1-yl)propyl]-3-phenyl-1,2-dihydroquinoxalin-2-one","authors":"Nadeem Abad , Joel T. Mague , Abdulsalam Alsubari , El Mokhtar Essassi , Abdullah Yahya Abdullah Alzahrani , Youssef Ramli , L. Van Meervelt (Editor)","doi":"10.1107/S2056989024004377","DOIUrl":"10.1107/S2056989024004377","url":null,"abstract":"<div><p>In the title compound, the dihydroquinoxaline units are both essentially planar and the dihedral angle between their mean planes is 64.82 (2)°. In the crystal, C—H⋯O hydrogen bonds form chains along the <em>b</em>-axis direction which are joined by π-stacking and C—H⋯π(ring) interactions into the full three-dimensional network structure.</p></div><div><p>In the title compound, C<sub>31</sub>H<sub>24</sub>N<sub>4</sub>O<sub>2</sub>, the dihydroquinoxaline units are both essentially planar with the dihedral angle between their mean planes being 64.82 (4)°. The attached phenyl rings differ significantly in their rotational orientations with respect to the dihydroquinoxaline planes. In the crystal, one set of C—H⋯O hydrogen bonds form chains along the <em>b</em>-axis direction, which are connected in pairs by a second set of C—H⋯O hydrogen bonds. Two sets of π-stacking interactions and C—H⋯π(ring) interactions join the double chains into the final three-dimensional structure.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 610-614"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140963523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004286
Nurlana D. Sadikhova , Mehmet Akkurt , Valeh M. Ismayilov , Niftali N. Yusubov , Khudayar I. Hasanov , Ajaya Bhattarai , X. Hao (Editor)
In the crystal, the molecules are connected into dimers by C—H⋯O hydrogen bonds with (8) ring motifs, forming zigzag ribbons along the b-axis direction.
The title molecule, C18H26O4, consists of two symmetrical halves related by the inversion centre at the mid-point of the central –C—C– bond. The hexene ring adopts an envelope conformation. In the crystal, the molecules are connected into dimers by C—H⋯O hydrogen bonds with R22(8) ring motifs, forming zigzag ribbons along the b-axis direction. According to a Hirshfeld surface analysis, H⋯H (68.2%) and O⋯H/H⋯O (25.9%) interactions are the most significant contributors to the crystal packing. The contribution of some disordered solvent to the scattering was removed using the SQUEEZE routine [Spek (2015#). Acta Cryst. C71, 9–18] in PLATON. The solvent contribution was not included in the reported molecular weight and density.
{"title":"Crystal structure and Hirshfeld surface analysis of 3,3′-[ethane-1,2-diylbis(oxy)]bis(5,5-dimethylcyclohex-2-en-1-one) including an unknown solvate","authors":"Nurlana D. Sadikhova , Mehmet Akkurt , Valeh M. Ismayilov , Niftali N. Yusubov , Khudayar I. Hasanov , Ajaya Bhattarai , X. Hao (Editor)","doi":"10.1107/S2056989024004286","DOIUrl":"10.1107/S2056989024004286","url":null,"abstract":"<div><p>In the crystal, the molecules are connected into dimers by C—H⋯O hydrogen bonds with <figure><img></figure> (8) ring motifs, forming zigzag ribbons along the <em>b</em>-axis direction.</p></div><div><p>The title molecule, C<sub>18</sub>H<sub>26</sub>O<sub>4</sub>, consists of two symmetrical halves related by the inversion centre at the mid-point of the central –C—C– bond. The hexene ring adopts an envelope conformation. In the crystal, the molecules are connected into dimers by C—H⋯O hydrogen bonds with <em>R</em> <sup>2</sup> <sub>2</sub>(8) ring motifs, forming zigzag ribbons along the <em>b</em>-axis direction. According to a Hirshfeld surface analysis, H⋯H (68.2%) and O⋯H/H⋯O (25.9%) interactions are the most significant contributors to the crystal packing. The contribution of some disordered solvent to the scattering was removed using the SQUEEZE routine [Spek (2015<span>#</span>). <em>Acta Cryst</em>. C<strong>71</strong>, 9–18] in <em>PLATON</em>. The solvent contribution was not included in the reported molecular weight and density.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 615-619"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151306/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282675","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004833
Yue Li , Jia Wei , Jie Han , Xu-Dong Chen , S.-L. Zheng (Editor)
This type of heterometallic and heteroleptic single cubane cluster represents a typical example within the Mo–Fe–S cluster family, which may be a good reference for understanding the structure and function of the nitrogenase FeMo cofactor.
The title compound, tetraethylammonium triazidotri-μ3-sulfido-[μ3-(trimethylsilyl)azanediido][tris(3,5-dimethylpyrazol-1-yl)hydroborato]triiron(+2.33)molybdenum(IV), (C8H20N)[Fe3MoS3(C15H22BN6)(C3H9NSi)(N3)3] or (Et4N)[(Tp*)MoFe3S3(μ3-NSiMe3)(N3)3] [Tp* = tris(3,5-dimethylpyrazol-1-yl)hydroborate(1−)], crystallizes as needle-like black crystals in space group P . In this cluster, the Mo site is in a distorted octahedral coordination model, coordinating three N atoms on the Tp* ligand and three μ3-bridging S atoms in the core. The Fe sites are in a distorted tetrahedral coordination model, coordinating two μ3-bridging S atoms, one μ3-bridging N atom from Me3SiN2−, and another N atom on the terminal azide ligand. This type of heterometallic and heteroleptic single cubane cluster represents a typical example within the Mo–Fe–S cluster family, which may be a good reference for understanding the structure and function of the nitrogenase FeMo cofactor. The residual electron density of disordered solvent molecules in the void space could not be reasonably modeled, thus the SQUEEZE [Spek (2015). Acta Cryst. C71, 9–18] function was applied. The solvent contribution is not included in the reported molecular weight and density.
标题化合物,四乙基-三叠氮基-三-μ3-硫代-[μ3-(三甲基硅基)氮杂二基][三-(3,5-二甲基吡唑-1-基)氢硼酸]三铁(+2.33)钼(IV),(C8H20N)[Fe3MoS3(C15H22BN6)(C3H9NSi)(N3)3]或(Et4N)[(Tp*)MoFe3S3(μ3-NSiMe3)(N3)3][Tp* = 三-(3,5-二甲基吡唑-1-基)氢硼酸酯(1-)],在空间群 P 中结晶为针状黑色晶体。在该晶簇中,Mo 位点呈扭曲的八面体配位模式,与 Tp* 配体上的三个 N 原子和核心中的三μ3 桥接 S 原子配位。铁的位点呈扭曲的四面体配位模式,与两个μ3 桥接的 S 原子、Me3SiN2- 的一个μ3 桥接的 N 原子以及末端叠氮配体上的另一个 N 原子配位。这类异金属和异极性单立方簇是 Mo-Fe-S 簇家族中的一个典型例子,可作为了解硝基激酶 FeMo 辅因子结构和功能的良好参考。空隙中无序溶剂分子小分子的残余电子密度无法合理建模,因此采用了 SQUEEZE [Spek (2015). Acta Cryst. C71, 9-18] 函数。报告的分子重量和密度不包括溶剂的贡献。
{"title":"Synthesis and crystal structure of the cluster (Et4N)[(Tp*)MoFe3S3(μ3-NSiMe3)(N3)3]","authors":"Yue Li , Jia Wei , Jie Han , Xu-Dong Chen , S.-L. Zheng (Editor)","doi":"10.1107/S2056989024004833","DOIUrl":"10.1107/S2056989024004833","url":null,"abstract":"<div><p>This type of heterometallic and heteroleptic single cubane cluster represents a typical example within the Mo–Fe–S cluster family, which may be a good reference for understanding the structure and function of the nitrogenase FeMo cofactor.</p></div><div><p>The title compound, tetraethylammonium triazidotri-μ<sub>3</sub>-sulfido-[μ<sub>3</sub>-(trimethylsilyl)azanediido][tris(3,5-dimethylpyrazol-1-yl)hydroborato]triiron(+2.33)molybdenum(IV), (C<sub>8</sub>H<sub>20</sub>N)[Fe<sub>3</sub>MoS<sub>3</sub>(C<sub>15</sub>H<sub>22</sub>BN<sub>6</sub>)(C<sub>3</sub>H<sub>9</sub>NSi)(N<sub>3</sub>)<sub>3</sub>] or (Et<sub>4</sub>N)[(Tp*)MoFe<sub>3</sub>S<sub>3</sub>(μ<sub>3</sub>-NSiMe<sub>3</sub>)(N<sub>3</sub>)<sub>3</sub>] [Tp* = tris(3,5-dimethylpyrazol-1-yl)hydroborate(1−)], crystallizes as needle-like black crystals in space group <em>P</em> <figure><img></figure> . In this cluster, the Mo site is in a distorted octahedral coordination model, coordinating three N atoms on the Tp* ligand and three μ<sub>3</sub>-bridging S atoms in the core. The Fe sites are in a distorted tetrahedral coordination model, coordinating two μ<sub>3</sub>-bridging S atoms, one μ<sub>3</sub>-bridging N atom from Me<sub>3</sub>SiN<sup>2−</sup>, and another N atom on the terminal azide ligand. This type of heterometallic and heteroleptic single cubane cluster represents a typical example within the Mo–Fe–S cluster family, which may be a good reference for understanding the structure and function of the nitrogenase FeMo cofactor. The residual electron density of disordered solvent molecules in the void space could not be reasonably modeled, thus the SQUEEZE [Spek (2015). <em>Acta Cryst</em>. C<strong>71</strong>, 9–18] function was applied. The solvent contribution is not included in the reported molecular weight and density.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 691-694"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151308/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004080
Firudin I. Guseinov , Sevim Türktekin Çelikesir , Mehmet Akkurt , Viacheslav O. Ovsyannikov , Bogdan I. Ugrak , Oksana M. Lavrova , Aida I. Samigullina , Ajaya Bhattarai , B. Therrien (Editor)
In the crystal, molecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an (8) motif. The dimers are linked into layers parallel to the (10 ) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π interactions connect the molecules, forming a three-dimensional network.
In the title compound, C6H4BrF3N4O2, the oxadiazole ring is essentially planar with a maximum deviation of 0.003 (2) Å. In the crystal, molecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an R22(8) motif. The dimers are linked into layers parallel to the (10 ) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π interactions connect the molecules, forming a three-dimensional network. The F atoms of the trifluoromethyl group are disordered over two sites in a 0.515 (6): 0.485 (6) ratio. The intermolecular interactions in the crystal structure were investigated and quantified using Hirshfeld surface analysis.
{"title":"Synthesis, crystal structure and Hirshfeld surface analysis of (3Z)-4-[(4-amino-1,2,5-oxadiazol-3-yl)amino]-3-bromo-1,1,1-trifluorobut-3-en-2-one","authors":"Firudin I. Guseinov , Sevim Türktekin Çelikesir , Mehmet Akkurt , Viacheslav O. Ovsyannikov , Bogdan I. Ugrak , Oksana M. Lavrova , Aida I. Samigullina , Ajaya Bhattarai , B. Therrien (Editor)","doi":"10.1107/S2056989024004080","DOIUrl":"10.1107/S2056989024004080","url":null,"abstract":"<div><p>In the crystal, molecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an <figure><img></figure> (8) motif. The dimers are linked into layers parallel to the (10 <figure><img></figure> ) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π interactions connect the molecules, forming a three-dimensional network.</p></div><div><p>In the title compound, C<sub>6</sub>H<sub>4</sub>BrF<sub>3</sub>N<sub>4</sub>O<sub>2</sub>, the oxadiazole ring is essentially planar with a maximum deviation of 0.003 (2) Å. In the crystal, molecular pairs are connected by N—H⋯N hydrogen bonds, forming dimers with an <em>R</em> <sup>2</sup> <sub>2</sub>(8) motif. The dimers are linked into layers parallel to the (10 <figure><img></figure> ) plane by N—H⋯O hydrogen bonds. In addition, C—O⋯π and C—Br⋯π interactions connect the molecules, forming a three-dimensional network. The F atoms of the trifluoromethyl group are disordered over two sites in a 0.515 (6): 0.485 (6) ratio. The intermolecular interactions in the crystal structure were investigated and quantified using Hirshfeld surface analysis.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 582-585"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140991232","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004687
Farid N. Naghiyev , Victor N. Khrustalev , Mehmet Akkurt , Elnur Z. Huseynov , Ajaya Bhattarai , Ali N. Khalilov , İbrahim G. Mamedov , S.-L. Zheng (Editor)
In the crystal, molecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π interactions connect the molecules by forming layers parallel to the (010) plane.
In the title compound, C19H17NO5S, the cyclohexene ring adopts nearly an envelope conformation. In the crystal, molecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π interactions connect the molecules by forming layers parallel to the (010) plane. According to the Hirshfeld surface analysis, H⋯H (36.9%), O⋯H/H⋯O (31.0%), C⋯H/H⋯C (18.9%) and S⋯H/H⋯S (7.9%) interactions are the most significant contributors to the crystal packing.
{"title":"Crystal structure and Hirshfeld surface analysis of dimethyl 2-oxo-4-(pyridin-2-yl)-6-(thiophen-2-yl)cyclohex-3-ene-1,3-dicarboxylate","authors":"Farid N. Naghiyev , Victor N. Khrustalev , Mehmet Akkurt , Elnur Z. Huseynov , Ajaya Bhattarai , Ali N. Khalilov , İbrahim G. Mamedov , S.-L. Zheng (Editor)","doi":"10.1107/S2056989024004687","DOIUrl":"10.1107/S2056989024004687","url":null,"abstract":"<div><p>In the crystal, molecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π interactions connect the molecules by forming layers parallel to the (010) plane.</p></div><div><p>In the title compound, C<sub>19</sub>H<sub>17</sub>NO<sub>5</sub>S, the cyclohexene ring adopts nearly an envelope conformation. In the crystal, molecules are linked by C—H⋯O hydrogen bonds, forming a three-dimensional network. In addition, C—H⋯π interactions connect the molecules by forming layers parallel to the (010) plane. According to the Hirshfeld surface analysis, H⋯H (36.9%), O⋯H/H⋯O (31.0%), C⋯H/H⋯C (18.9%) and S⋯H/H⋯S (7.9%) interactions are the most significant contributors to the crystal packing.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 654-658"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151323/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282676","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004298
Olivia D. Breen , Tony D. Keene , L. Suescun (Editor)
The title multi-component crystal, [Cu(NH3)5]Cl2·CO(NH2)2, was synthesized from a deep eutectic solvent to yield an unusual pentaaminecopper(II) complex. Hydrogen bonding takes place between chloride ions and both the pentaaminecopper ions and urea molecules.
The reaction of copper(II) oxalate and hexamethylenetetramine in a deep eutectic solvent made of urea and choline chloride produced crystals of pentaaminecopper(II) dichloride–urea (1/1), [Cu(NH3)5]Cl2·CO(NH2)2, which was characterized by single-crystal X-ray diffraction. The complex contains discrete pentaaminecopper(II) units in a square-based pyramidal geometry. The overall structure of the multi-component crystal is dictated by hydrogen bonding between urea molecules and amine H atoms with chloride anions.
草酸铜(II)与六亚甲基烯四矿在尿素和氯化胆碱组成的深共晶溶剂中发生反应,生成了五胺铜(II)二氯化尿素(1/1)晶体,即[Cu(NH3)5]Cl2-CO2-CO(NH2)2,并通过单晶 X 射线衍射对其进行了表征。该复合物含有离散的五胺铜(II)单元,呈正方形金字塔几何结构。多组分晶体的整体结构是由脲分子和胺 H 原子与氯阴离子之间的氢键决定的。
{"title":"Crystal structure and Hirshfeld surface of a pentaaminecopper(II) complex with urea and chloride","authors":"Olivia D. Breen , Tony D. Keene , L. Suescun (Editor)","doi":"10.1107/S2056989024004298","DOIUrl":"10.1107/S2056989024004298","url":null,"abstract":"<div><p>The title multi-component crystal, [Cu(NH<sub>3</sub>)<sub>5</sub>]Cl<sub>2</sub>·CO(NH<sub>2</sub>)<sub>2</sub>, was synthesized from a deep eutectic solvent to yield an unusual pentaaminecopper(II) complex. Hydrogen bonding takes place between chloride ions and both the pentaaminecopper ions and urea molecules.</p></div><div><p>The reaction of copper(II) oxalate and hexamethylenetetramine in a deep eutectic solvent made of urea and choline chloride produced crystals of pentaaminecopper(II) dichloride–urea (1/1), [Cu(NH<sub>3</sub>)<sub>5</sub>]Cl<sub>2</sub>·CO(NH<sub>2</sub>)<sub>2</sub>, which was characterized by single-crystal X-ray diffraction. The complex contains discrete pentaaminecopper(II) units in a square-based pyramidal geometry. The overall structure of the multi-component crystal is dictated by hydrogen bonding between urea molecules and amine H atoms with chloride anions.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 596-600"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151326/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282686","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004997
Christian Näther , Aleksej Jochim , T. Akitsu (Editor)
The crystal structure of title compound consists of discrete complexes in which the CoII cations are octahedrally coordinated to two terminally N-bonded thiocyanate anions and four 4-methylpyridine coligands and represents a new polymorphic modification of Co(NCS)2(4-methylpyridine)4, which is already reported in the literature.
The title compound, [Co(NCS)2(C6H7N)4] or Co(NCS)2(4-methylpyridine)4, was prepared by the reaction of Co(NCS)2 with 4-methylpyridine in water and is isotypic to one of the polymorphs of Ni(NCS)2(4-methylpyridine)4 [Kerr & Williams (1977#). Acta Cryst. B33, 3589–3592 and Soldatov et al. (2004#). Cryst. Growth Des.4, 1185–1194]. Comparison of the experimental X-ray powder pattern with that calculated from the single-crystal data proves that a pure phase has been obtained. The asymmetric unit consists of one CoII cation, two crystallographically independent thiocyanate anions and four independent 4-methylpyridine ligands, all located in general positions. The CoII cations are sixfold coordinated to two terminally N-bonded thiocyanate anions and four 4-methylpyridine coligands within slightly distorted octahedra. Between the complexes, a number of weak C—H⋯N and C—H⋯S contacts are found. This structure represent a polymorphic modification of Co(NCS)2(4-methylpyridine)4 already reported in the CCD [Harris et al. (2003#). NASA Technical Reports, 211890]. In contrast to this form, the crystal structure of the new polymorph shows a denser packing, indicating that it is thermodynamically stable at least at low temperatures. Thermogravimetric and differential thermoanalysis reveal that the title compound starts to decomposes at about 100°C and that the coligands are removed in separate steps without any sign of a polymorphic transition before decomposition.
{"title":"Synthesis, crystal structure and thermal properties of a new polymorphic modification of diisothiocyanatotetrakis(4-methylpyridine)cobalt(II)","authors":"Christian Näther , Aleksej Jochim , T. Akitsu (Editor)","doi":"10.1107/S2056989024004997","DOIUrl":"10.1107/S2056989024004997","url":null,"abstract":"<div><p>The crystal structure of title compound consists of discrete complexes in which the Co<sup>II</sup> cations are octahedrally coordinated to two terminally N-bonded thiocyanate anions and four 4-methylpyridine coligands and represents a new polymorphic modification of Co(NCS)<sub>2</sub>(4-methylpyridine)<sub>4</sub>, which is already reported in the literature.</p></div><div><p>The title compound, [Co(NCS)<sub>2</sub>(C<sub>6</sub>H<sub>7</sub>N)<sub>4</sub>] or Co(NCS)<sub>2</sub>(4-methylpyridine)<sub>4</sub>, was prepared by the reaction of Co(NCS)<sub>2</sub> with 4-methylpyridine in water and is isotypic to one of the polymorphs of Ni(NCS)<sub>2</sub>(4-methylpyridine)<sub>4</sub> [Kerr & Williams (1977<span>#</span>). <em>Acta Cryst.</em> B<strong>33</strong>, 3589–3592 and Soldatov <em>et al.</em> (2004<span>#</span>). <em>Cryst. Growth Des.</em> <strong>4</strong>, 1185–1194]. Comparison of the experimental X-ray powder pattern with that calculated from the single-crystal data proves that a pure phase has been obtained. The asymmetric unit consists of one Co<sup>II</sup> cation, two crystallographically independent thiocyanate anions and four independent 4-methylpyridine ligands, all located in general positions. The Co<sup>II</sup> cations are sixfold coordinated to two terminally N-bonded thiocyanate anions and four 4-methylpyridine coligands within slightly distorted octahedra. Between the complexes, a number of weak C—H⋯N and C—H⋯S contacts are found. This structure represent a polymorphic modification of Co(NCS)<sub>2</sub>(4-methylpyridine)<sub>4</sub> already reported in the CCD [Harris <em>et al.</em> (2003<span>#</span>). <em>NASA Technical Reports</em>, 211890]. In contrast to this form, the crystal structure of the new polymorph shows a denser packing, indicating that it is thermodynamically stable at least at low temperatures. Thermogravimetric and differential thermoanalysis reveal that the title compound starts to decomposes at about 100°C and that the coligands are removed in separate steps without any sign of a polymorphic transition before decomposition.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 677-681"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151321/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282693","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S205698902400481X
Roberta Pinalli , Chiara Massera , J. M. Delgado (Editor)
The 2:1 supramolecular complex between a tetraquinoxaline-based cavitand and benzonitrile as a guest has been studied through X-ray diffraction analysis. One of the benzonitrile molecules in engulfed inside the macrocycle.
The structural characterization is reported of the supramolecular complex between the tetraquinoxaline-based cavitand 2,8,14,20-tetrahexyl-6,10:12,16:18,22:24,4-O,O′-tetrakis(quinoxaline-2,3-diyl)calix[4]resorcinarene (QxCav) with benzonitrile. The complex, of general formula C84H80N8O8·2C7H5N, crystallizes in the space group P with two independent molecules in the asymmetric unit, displaying very similar geometrical parameters. For each complex, one of the benzonitrile molecules is engulfed inside the cavity, while the other is located among the alkyl legs at the lower rim. The host and the guests mainly interact through weak C—H⋯π, C—H⋯N and dispersion interactions. These interactions help to consolidate the formation of supramolecular chains running along the crystallographic b-axis direction.
报告了以四喹喔啉为基础的空穴和 2,8,14,20-etra-hexyl-6,10:12,16:18,22:24,4-O,O'-tetra-kis-(quinoxaline-2,3-di-yl)calix[4]resorcinarene (QxCav) 与苯甲腈之间的超分子复合物的结构特征。通式为 C84H80N8O8-2C7H5N 的复合物在 P 空间群中结晶,不对称单元中有两个独立的分子胚珠,显示出非常相似的几何参数。在每个复合物中,一个苯腈分子胚珠被吞噬在空腔内,而另一个则位于下缘的烷基支链中。宿主和客体主要通过微弱的 C-H⋯π、C-H⋯N 和色散作用发生相互作用。这些相互作用有助于巩固沿晶体学 b 轴方向的超分子链的形成。
{"title":"Structural characterization of the supramolecular complex between a tetraquinoxaline-based cavitand and benzonitrile","authors":"Roberta Pinalli , Chiara Massera , J. M. Delgado (Editor)","doi":"10.1107/S205698902400481X","DOIUrl":"10.1107/S205698902400481X","url":null,"abstract":"<div><p>The 2:1 supramolecular complex between a tetraquinoxaline-based cavitand and benzonitrile as a guest has been studied through X-ray diffraction analysis. One of the benzonitrile molecules in engulfed inside the macrocycle.</p></div><div><p>The structural characterization is reported of the supramolecular complex between the tetraquinoxaline-based cavitand 2,8,14,20-tetrahexyl-6,10:12,16:18,22:24,4-<em>O</em>,<em>O</em>′-tetrakis(quinoxaline-2,3-diyl)calix[4]resorcinarene (<strong>QxCav</strong>) with benzonitrile. The complex, of general formula C<sub>84</sub>H<sub>80</sub>N<sub>8</sub>O<sub>8</sub>·2C<sub>7</sub>H<sub>5</sub>N, crystallizes in the space group <em>P</em> <figure><img></figure> with two independent molecules in the asymmetric unit, displaying very similar geometrical parameters. For each complex, one of the benzonitrile molecules is engulfed inside the cavity, while the other is located among the alkyl legs at the lower rim. The host and the guests mainly interact through weak C—H⋯π, C—H⋯N and dispersion interactions. These interactions help to consolidate the formation of supramolecular chains running along the crystallographic <em>b-</em>axis direction.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 671-676"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11151304/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141282689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1107/S2056989024004572
Nguyen Thi Thanh Chi , Pham Van Thong , Nguyen Manh Thang , Pham Ngoc Thao , Luc Van Meervelt , S. Parkin (Editor)
The synthesis and crystal structures of three organoplatinum(II) complexes bearing natural arylolefin and quinoline derivatives are reported.
Three organoplatinum(II) complexes bearing natural arylolefin and quinoline derivatives, namely, [4-methoxy-5-(2-methoxy-2-oxoethoxy)-2-(prop-2-en-1-yl)phenyl](quinolin-8-olato)platinum(II), [Pt(C13H15O4)(C9H6NO)], (I), [4-methoxy-5-(2-oxo-2-propoxyethoxy)-2-(prop-2-en-1-yl)phenyl](quinoline-2-carboxylato)platinum(II), [Pt(C15H19O4)(C10H6NO2)], (II), and chlorido[4-methoxy-5-(2-oxo-2-propoxyethoxy)-2-(prop-2-en-1-yl)phenyl](quinoline)platinum(II), [Pt(C15H19O4)Cl(C9H7N)], (III), were synthesized and structurally characterized by IR and 1H NMR spectroscopy, and by single-crystal X-ray diffraction. The results showed that the cycloplatinated arylolefin coordinates with PtIIvia the carbon atom of the phenyl ring and the C=Colefinic group. The deprotonated 8-hydroxyquinoline (C9H6NO) and quinoline-2-carboxylic acid (C10H6NO2) coordinate with the PtII atom via the N and O atoms in complexes (I) and (II) while the quinoline (C9H7N) coordinates via the N atom in (III). Moreover, the coordinating N atom in complexes (I)–(III) is in the cis position compared to the C=Colefinic group. The crystal packing is characterized by C—H⋯π, C—H⋯O [for (II) and (III)], C—H⋯Cl [for (III) and π–π [for (I)] interactions.
三种含天然芳基烯烃和喹啉衍生物的有机铂(II)配合物,即[4-甲氧基-5-(2-甲氧基-2-氧代乙氧基)-2-(丙-2-烯-1-基)苯基](喹啉-8-醇)铂(II)、铂(C13H15O4)(C9H6NO)],(I),[4-甲氧基-5-(2-氧代-2-丙氧基乙氧基)-2-(丙-2-烯-1-基)苯基](喹啉-2-羧基)铂(II)、合成了[Pt(C15H19O4)(C10H6NO2)](II)和氯[4-甲氧基-5-(2-氧代-2-丙氧基乙氧基)-2-(丙-2-烯-1-基)苯基](喹啉)铂(II)[Pt(C15H19O4)Cl(C9H7N)](III)。结果表明,环铂化芳基烯烃通过苯基环的碳原子和 C= 烯基与 PtII 配位。在配合物(I)和(II)中,去质子化的 8-羟基喹啉(C9H6NO)和喹啉-2-羧酸(C10H6NO2)通过 N 原子和 O 原子与 PtII 原子配位,而在(III)中,喹啉(C9H7N)通过 N 原子配位。此外,与 C= 烯基相比,配合物 (I)-(III) 中的配位 N 原子处于顺式位置。晶体结构的特点是 C-H...π、C-H...O [对于 (II) 和 (III)]、C-H...Cl [对于 (III)] 和 π-π [对于 (I)] 相互作用。
{"title":"Synthesis and crystal structures of three organoplatinum(II) complexes bearing natural arylolefin and quinoline derivatives","authors":"Nguyen Thi Thanh Chi , Pham Van Thong , Nguyen Manh Thang , Pham Ngoc Thao , Luc Van Meervelt , S. Parkin (Editor)","doi":"10.1107/S2056989024004572","DOIUrl":"10.1107/S2056989024004572","url":null,"abstract":"<div><p>The synthesis and crystal structures of three organoplatinum(II) complexes bearing natural arylolefin and quinoline derivatives are reported.</p></div><div><p>Three organoplatinum(II) complexes bearing natural arylolefin and quinoline derivatives, namely, [4-methoxy-5-(2-methoxy-2-oxoethoxy)-2-(prop-2-en-1-yl)phenyl](quinolin-8-olato)platinum(II), [Pt(C<sub>13</sub>H<sub>15</sub>O<sub>4</sub>)(C<sub>9</sub>H<sub>6</sub>NO)], (<strong>I</strong>), [4-methoxy-5-(2-oxo-2-propoxyethoxy)-2-(prop-2-en-1-yl)phenyl](quinoline-2-carboxylato)platinum(II), [Pt(C<sub>15</sub>H<sub>19</sub>O<sub>4</sub>)(C<sub>10</sub>H<sub>6</sub>NO<sub>2</sub>)], (<strong>II</strong>), and chlorido[4-methoxy-5-(2-oxo-2-propoxyethoxy)-2-(prop-2-en-1-yl)phenyl](quinoline)platinum(II), [Pt(C<sub>15</sub>H<sub>19</sub>O<sub>4</sub>)Cl(C<sub>9</sub>H<sub>7</sub>N)], (<strong>III</strong>), were synthesized and structurally characterized by IR and <sup>1</sup>H NMR spectroscopy, and by single-crystal X-ray diffraction. The results showed that the cycloplatinated arylolefin coordinates with Pt<sup>II</sup> <em>via</em> the carbon atom of the phenyl ring and the C=C<sub>olefinic</sub> group. The deprotonated 8-hydroxyquinoline (C<sub>9</sub>H<sub>6</sub>NO) and quinoline-2-carboxylic acid (C<sub>10</sub>H<sub>6</sub>NO<sub>2</sub>) coordinate with the Pt<sup>II</sup> atom <em>via</em> the N and O atoms in complexes (<strong>I</strong>) and (<strong>II</strong>) while the quinoline (C<sub>9</sub>H<sub>7</sub>N) coordinates <em>via</em> the N atom in (<strong>III</strong>). Moreover, the coordinating N atom in complexes (<strong>I</strong>)–(<strong>III</strong>) is in the <em>cis</em> position compared to the C=C<sub>olefinic</sub> group. The crystal packing is characterized by C—H⋯π, C—H⋯O [for (<strong>II</strong>) and (<strong>III</strong>)], C—H⋯Cl [for (<strong>III</strong>) and π–π [for (<strong>I</strong>)] interactions.</p></div>","PeriodicalId":7367,"journal":{"name":"Acta Crystallographica Section E: Crystallographic Communications","volume":"80 6","pages":"Pages 630-635"},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141118423","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}