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Use of Ultrasonication as a Rapid Pretreatment Method for MALDI-TOF MS of Mycobacterial Samples 超声法快速预处理分枝杆菌MALDI-TOF质谱法
Pub Date : 2018-05-07 DOI: 10.4172/2161-1068.1000260
K. Niitsuma, S. Koshiba, M. Saitou, Tomoko Suzuki, K. Chikamatsu, Akiko Takagi, S. Mitarai
Background: In Japan, matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) is used as a simple and accurate method for mycobacterial identification, but existing pretreatment techniques are time-consuming and laborious.Objective: We characterized a new pretreatment technique that extracts proteins using ultrasonic disruption.Methods: We compared this new technique with the current pretreatment method and examined the usefulness of ultrasonication, including its use in mycobacterial inactivation. A total of 174 mycobacterial isolates were tested, including 50 Mycobacterium tuberculosis complex strains, 57 Mycobacterium avium strains, 55 Mycobacterium intracellulare strains, and 12 Mycobacterium kansasii strains. The ultrasonic pretreatment method was performed with or without heat-pretreatment at 95°C for 30 minutes, in parallel with the current conventional method. For all tested strains, the mycobacterial identification agreed when comparing the new and conventional methods.Results: Samples prepared by ultrasonication without heat pretreatment exhibited multiple significant differences when compared with samples prepared by ultrasonication with heat pretreatment or by conventional methods. However, most scores were over 2.0, and the lowest score exceeded 1.7. Furthermore, the new techniques could be performed in only 10 minutes for diagnosis. In addition, we confirmed that 1 minute of ultrasonic pretreatment yielded complete inactivation of M. tuberculosis complex strains.Conclusion: The more rapid technique of protein extraction/inactivation by ultrasonication without heat pretreatment is expected to be highly useful in clinical laboratory settings.
背景:在日本,基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)是一种简单、准确的分枝杆菌鉴定方法,但现有的预处理技术耗时费力。目的:研究一种利用超声破坏提取蛋白质的新预处理技术。方法:将超声技术与现有的预处理方法进行比较,探讨超声技术在分枝杆菌灭活中的应用。共检测174株分枝杆菌,其中结核分枝杆菌复合体50株,鸟分枝杆菌57株,胞内分枝杆菌55株,堪萨斯分枝杆菌12株。超声预处理方法在95°C下进行或不进行热预处理30分钟,与目前的常规方法平行。在比较新方法和传统方法时,所有测试菌株的分枝杆菌鉴定一致。结果:不经热处理的超声制备样品与经热处理的超声制备样品及常规方法制备样品存在多重显著差异。但是,大多数人的分数都在2.0以上,最低的分数超过了1.7。此外,新技术可以在10分钟内完成诊断。此外,我们证实1分钟的超声预处理可以使结核分枝杆菌复合体菌株完全失活。结论:超声不经热预处理的快速蛋白质提取/失活技术有望在临床实验室中发挥重要作用。
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引用次数: 1
First Insight into Molecular Epidemiology of Tuberculosis Infection in Slaughtered Sheep Intended to Human Consumption in Cameroon: The Case of New-Bell’s Slaughterhouses 喀麦隆供人类食用的屠宰绵羊结核病感染的分子流行病学初探——以新贝尔屠宰场为例
Pub Date : 2018-04-23 DOI: 10.4172/2161-1068.1000259
F. Koro, Ateugieu Guemechieu Romaric, Em Tchamba Kombou, O. Tatiana, Yannick Kamdem Simo, J. A. Assam, Penlap Beng, N. N. Rosalie, E. F. Xavier
Objective: Tuberculosis (TB) remains understudied in Cameroonian sheep which are very consumed by human beings and which nevertheless live in close contact with cattle in which TB remains endemic. We carried for the first time a six months descriptive cross sectional study on slaughtered sheep in the major slaughter-house of Douala, from November 2013 to April 2014.Methods: About 2922 slaughtered sheep were successively inspected for tuberculosis through visual examination and palpation of carcasses, lungs, livers, hearts, intestine, inner carcasses and lymph nodes. ZiehlNeelsen staining, culture on Lowenstein Jensen solid media supplemented with Pyruvate or Para Nitro Benzene (PNB) and molecular techniques (Genotype Mycobacterium CM/AS assay and Spoligotyping) were used to identify atypical mycobacteria and Mycobacterium tuberculosis Complex (MTBC) species.Results: From the 2922 sheep slaughtered, 810 presented tuberculosis like lesions corresponding to an apparent prevalence of 27.72% (810/2922). Ziehl-Neelsen examination confirmed Acid fast bacilli in 77.78% (630/810) of cases, corresponding to apparent prevalence of 21.56%. Liver was significantly the most affected by tuberculosis like lesion with 40.74% of case (χ2=67.02, p<0.0001). The use of para-nitro-benzoic acid showed that 10.74% of all detected cases are caused by atypical mycobacteria, for which molecular typing identified, Mycobacterium fortuitum, Mycobacterium interjectum and Mycobacterium sp. Moreover, spoligotyping reveals that 4.44% of cases were due to M. tuberculosis represented by it ubiquitous T lineage SIT53. No M. bovis or M. caprae were identified.Conclusion: This result shows implication of M. tuberculosis and the high prevalence of atypical mycobacteria in sheep intended for human consumption in Cameroon.
目的:对喀麦隆绵羊结核病(TB)的研究仍然不足,这些绵羊被人类大量食用,但与结核病仍然流行的牛密切接触。2013年11月至2014年4月,我们首次对杜阿拉主要屠宰场屠宰的绵羊进行了为期六个月的描述性横断面研究。ZiehlNeelsen染色,在添加丙酮酸盐或对硝基苯(PNB)的Lowenstein-Jensen固体培养基上培养,以及分子技术(基因型分枝杆菌CM/AS测定和斯波利基因分型)用于鉴定非典型分枝杆菌和结核分枝杆菌复合体(MTBC)物种。结果:在被屠宰的2922只绵羊中,810只出现结核病样病变,明显患病率为27.72%(810/2922)。Ziehl-Neelsen检查证实77.78%(630/810)的病例中有抗酸杆菌,相应的明显患病率为21.56%。肝脏受结核样病变的影响最大,占40.74%(χ2=67.02,p<0.0001)。对硝基苯甲酸的使用表明,10.74%的检测病例由非典型分枝杆菌引起,偶然分枝杆菌、插入分枝杆菌和分枝杆菌属。此外,孢子分型显示4.44%的病例是由结核分枝杆菌引起的,以其普遍存在的T谱系SIT53为代表。没有发现牛分枝杆菌或山羊分枝杆菌。结论:这一结果表明,在喀麦隆供人食用的绵羊中,结核分枝杆菌和非典型分枝杆菌的高患病率具有一定的意义。
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引用次数: 0
Strategies for Reducing Leprosy Stigma 减少麻风污名化战略
Pub Date : 2018-02-02 DOI: 10.4172/2161-1068.1000253
C. Castro, Lina Erazo, M. Gunturiz
Leprosy is an infectious, chronic, long-lasting disease caused by Mycobacterium leprae and Mycobacterium lepromatosis that leads to multiple clinical symptoms including skin manifestations, disfigurement, deformity, stigma and disability. The World Health Organization considers leprosy a complex disease that has a great impact on health in addition to causing social, economic and psychological burdens in affected populations. With this review, we intend to demonstrate how the stigmatization of leprosy induces negative behaviors towards patients, impairing their attention and access to diagnosis and treatment and leads to a deterioration in their quality of life.
麻风是由麻风分枝杆菌和麻风分枝杆菌引起的一种传染性、慢性、持久性疾病,可导致多种临床症状,包括皮肤表现、毁容、畸形、耻辱和残疾。世界卫生组织认为麻风病是一种复杂的疾病,除了给受影响人群带来社会、经济和心理负担外,它对健康也有很大影响。通过这篇综述,我们打算证明麻风病的污名化如何导致对患者的负面行为,损害他们的注意力和获得诊断和治疗的机会,并导致他们的生活质量恶化。
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引用次数: 3
Mitigating PCR /Amplicon Contamination in a High Risk High Burden Mycobacterial Reference Laboratory in a Resource Limited Setting 在资源有限的高风险高负担分枝杆菌参比实验室减轻PCR /扩增子污染
Pub Date : 2018-01-01 DOI: 10.4172/2161-1068.1000261
P. Das, Somtirtha B Ganguly, Bodhisatya Mandal
Background: Nucleic acid amplification techniques have become important machineries in the diagnosis of several diseases in clinical laboratories. PCR contamination/Amplicon Contamination leading to false positivity remains a major concern in these laboratories. Prevention of these contaminations in establishing these Molecular Biology Laboratories has been very crucial over the years. Though closed system PCRs has substantial reduction in the PCR contamination rates the conventional probe based hybridization methods continues to show occurrence of contamination for various reasons. The Study involved checking the crucial parameters as well as the probable candidates of causing the contamination at a high burden setting. Bringing out the most effective interventions in controlling PCR contaminations for future endeavors stood as a priority. The study explored the efficacies of different sets of interventions contributed in the process of reducing the contaminants.Materials and Methods: The detection of the contaminating PCR products or amplicons or contaminating organism is done by the Genotype MTBDR plus V2 kits (Hains Life Sciences) based on DNA strip technologyResults: The pre and post cleaning as well as cleaning of the working surfaces was able to bring down the mean contamination percentage by 36.5%. The combined effect of the cleaning of the work surfaces, the automated pipetting devices and the AC machines along with it filters were able bring down the mean contamination percentage to 53.5% reducing the rate contamination nearly to between 94.6% (mean percentage contamination was 56.5% at the control run).
背景:核酸扩增技术已成为临床实验室诊断多种疾病的重要手段。PCR污染/扩增子污染导致假阳性仍然是这些实验室关注的主要问题。多年来,在建立这些分子生物学实验室时,预防这些污染是非常重要的。虽然封闭系统PCR的污染率大大降低,但传统的基于探针的杂交方法由于各种原因仍然显示出污染的发生。该研究包括检查关键参数以及在高负荷设置下引起污染的可能候选者。提出最有效的干预措施,以控制PCR污染的未来努力是一个优先事项。本研究探讨了在减少污染物的过程中不同干预措施的效果。材料和方法:采用基于DNA条带技术的基因型MTBDR + V2试剂盒(Hains Life Sciences)对污染的PCR产物或扩增子或污染的生物体进行检测。结果:前后清洗和工作表面清洗可使平均污染率降低36.5%。工作表面的清洁,自动移液装置和交流机器及其过滤器的综合效果能够将平均污染百分比降低到53.5%,将污染率降低到94.6%之间(控制运行时平均污染百分比为56.5%)。
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引用次数: 0
Detection of Potentially Pathogenic Non-Tuberculous Mycobacteria in Artisanal Coalho Cheese from the State of Paraiba, Northeast Brazil 巴西东北部帕拉伊巴州手工奶酪中潜在致病性非结核分枝杆菌的检测
Pub Date : 2018-01-01 DOI: 10.4172/2161-1068.1000266
Sarti Ecfb, Rodrigues Ra, Duarte Lfc, Bacanelli Gm, W. Lilenbaum, Araujo Fr
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引用次数: 2
Abdominal Wall Tuberculosis Infection and TB Peritonitis Seen in 18F-FDG PET/CT Imaging 18F-FDG PET/CT表现为腹壁结核感染和结核性腹膜炎
Pub Date : 2018-01-01 DOI: 10.4172/2161-1068.1000254
P. Hsiao, TaoQian Tang, S. Liu, Jen-Jyh Lee
While 18F-FDG PET/CT imaging is used in malignant conditions, a positive finding does not exclude the diagnosis of tuberculosis, especially in countries with high TB prevalence rates.18F-FDG PET/CT imaging may have a role in the assistance of diagnosing TB, especially extra-pulmonary lesions. This is a case report of the patient used 18F-FDG PET/CT imaging.
虽然18F-FDG PET/CT成像用于恶性疾病,但阳性结果并不排除结核病的诊断,特别是在结核病患病率高的国家。18F-FDG PET/CT成像可能有助于诊断结核病,特别是肺外病变。这是一个使用18F-FDG PET/CT成像的病例报告。
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引用次数: 0
Strategies for Designing Novel Anti-Tubercular Drugs with Special Reference to Mycobacterial MelF (Rv1936) as a Target 以分枝杆菌MelF (Rv1936)为靶点的新型抗结核药物的设计策略
Pub Date : 2018-01-01 DOI: 10.4172/2161-1068.1000262
R. Dharra, Mehta Pk
Tuberculosis (TB) is a major public health problem throughout the world. There is an immediate need to device novel anti-tubercular drugs (ATDs). Whole cell screening (WCS) and target based screening (TBS) approaches are widely used to devise new ATDs. WCS is considered relatively a favourable strategy but it lacks in the precise target knowledge, whereas the target based hit compounds may not ensure the drugability. In this manuscript, we have discussed the potent inhibitors designed against the mycobacterial MelF (Rv1936) by using the TBS as well as virtual ligand screening, which also revealed synergistic effect with the first-line bactericidal drugs, i.e., isoniazid and rifampicin.
结核病(TB)是全世界的一个主要公共卫生问题。迫切需要研制新型抗结核药物(ATDs)。全细胞筛选(WCS)和基于靶标的筛选(TBS)方法被广泛用于设计新的ATDs。WCS被认为是一种相对有利的策略,但它缺乏精确的靶点知识,而基于靶点的hit化合物可能无法确保其可药物性。在本文中,我们讨论了利用TBS和虚拟配体筛选设计的针对分枝杆菌MelF (Rv1936)的强效抑制剂,并显示了与一线杀菌药物异烟肼和利福平的协同作用。
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引用次数: 1
Screening of BCG Vaccine Efficacy among Healthy Vaccinated Adults in Khartoum, Sudan 在苏丹喀土穆接种卡介苗的健康成人中筛选卡介苗的效力
Pub Date : 2018-01-01 DOI: 10.4172/2161-1068.1000269
Goris Bmt, Saleh Fm, Mohammed Fa, Mohammed Sa, Ahmed, Yousif Ra, M. Mi
Tuberculosis (TB) is a major global health problem. The BCG is an attenuated vaccine. Tuberculin test is used as a nonspecific TB vaccination indicator. This study was aimed to determine the efficacy of BCG vaccine through screening of healthy, vaccinated adults’ subjects in Khartoum. A total of one hundred (n=100) healthy and TB symptoms free participants were screened by manteaux test. The participants were involving 55 (55%) males and 45 (45%) female. All participants were over 20 years and most of them had a scar in their vaccination site. All participants were screened through injection of purified protein derivative PPD (only 0.1 mL) intra-dermally into their volar forearm then 48-72 post-injection their induration diameter was measured. The results showed that out one hundred (n=100) participants, only 39 (39%) were positive for Manteaux test (≥ 10 mm diameter), while 61 (61%) were negative (≥ 10 mm diameter). Among the 39 positives, 33 show reading between 10 mm to 15 mm and 6 of them show zone ≥ 15 mm. In the other hand 53 out of 61 tuberculin test negative participants showed no induration post PPD injection and the rest were shows reading zone between 5 to 9 mm. The result shows that among the 39 positive participants 23 (58.97%) were male while only 16 (41.03%) were female. The mean of zone reading among the positive participants is higher in male 13.96 ± 3.29 than female 13.81 ± 2.22. The study concluded that more than half of the participants were negative for tuberculin test and this may be interpreted by either the vaccine was invalid or their cell-mediated immunity against TB is reduced. The discrepancy in the zone reading means between male and female may be related to some physiological difference. Further studies with more sample size and by using a more advanced technique (IFNγ) should be done to clarify the results.
结核病是一个重大的全球卫生问题。卡介苗是一种减毒疫苗。结核菌素试验被用作非特异性结核疫苗接种指标。本研究旨在通过筛选喀土穆接种过卡介苗的健康成人受试者来确定卡介苗的效力。通过manteaux试验筛选了100名(n=100)健康和无结核病症状的参与者。参与者包括55名(55%)男性和45名(45%)女性。所有的参与者都在20岁以上,他们中的大多数人在接种疫苗的部位都有疤痕。所有参与者都通过向前臂掌侧皮下注射纯化蛋白衍生物PPD(仅0.1 mL)进行筛选,然后在注射48-72后测量其硬化直径。结果显示,100名受试者(n=100)中,Manteaux试验(直径≥10 mm)阳性39例(39%),阴性61例(61%)。39例阳性中,读数在10mm ~ 15mm之间的有33例,区域≥15mm的有6例。另一方面,61名结核菌素测试阴性的参与者中有53人在注射PPD后没有出现硬结,其余的人显示在5到9毫米之间的读数区。结果显示,39名阳性受试者中,男性23人(58.97%),女性16人(41.03%)。阳性受试者的区读平均值男性(13.96±3.29)高于女性(13.81±2.22)。该研究得出的结论是,超过一半的参与者结核菌素试验呈阴性,这可能被解释为疫苗无效或他们对结核病的细胞介导免疫力降低。男女读区方式的差异可能与生理上的差异有关。应该使用更先进的技术(ifn - γ)进行更多样本量的进一步研究以澄清结果。
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引用次数: 0
Antigens for DNA Vaccines Against Tuberculosis 抗结核DNA疫苗抗原
Pub Date : 2018-01-01 DOI: 10.4172/2161-1068.1000255
A. Mustafa
Tuberculosis (TB) is a major global disease caused by a bacterial pathogen and it has existed in the world since antiquity. It is suggested that TB has killed maximum number of people in the world, when compared with other diseases caused by microbial agents [1]. According to the most recent data published by the World Health Organization (WHO), TB was the leading cause of human deaths from a single pathogen, ranking above HIV/AIDS. According to the WHO report, 10.4 million people became diseased, and 1.7 million people died from TB in 2016 [2]. Among the factors contributing to continued carnage due to TB include the non-availability of an effective vaccine that can consistently provide protection in all countries of the world and different manifestations of TB [3]. The currently available vaccine, i.e. Mycobacterium bovis BCG is inconsistent in providing protection against TB in different parts of the world [4]. Hence, work is in progress to develop alternative vaccines based on whole organisms and subunit vaccines, including DNA vaccines [5].
结核病(TB)是一种由细菌性病原体引起的全球性重大疾病,自古以来就在世界各地存在。这表明,与其他由微生物引起的疾病相比,结核病是世界上死亡人数最多的疾病。根据世界卫生组织(世卫组织)公布的最新数据,结核病是单一病原体导致人类死亡的主要原因,超过艾滋病毒/艾滋病。根据世卫组织的报告,2016年有1040万人患病,170万人死于结核病。导致结核病造成的持续屠杀的因素包括无法获得能够在世界所有国家持续提供保护的有效疫苗,以及结核病的不同表现。目前可用的疫苗,即牛分枝杆菌卡介苗,在世界不同地区提供结核病保护方面并不一致。因此,开发基于整个生物体和亚单位疫苗的替代疫苗,包括DNA疫苗[5]的工作正在进行中。
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引用次数: 0
Intravesical BCG Therapy and Side Effects-Case Reports and a Review of Literature 膀胱内卡介苗治疗及副作用:病例报告及文献回顾
Pub Date : 2018-01-01 DOI: 10.4172/2161-1068.1000270
S. Vasudeva, A. Baffoe-Bonnie
BCG installation in bladder for stage 1 bladder carcinoma is becoming more common with increasingly aging population. BCG can be absorbed systemically and cause granuloma formation in almost any organ of the body with symptom onset from a few hours after installation of BCG to several years later. The treatment can vary from close observation in some cases, to use of isoniazid and rifampin with and without steroids for 3-9 months. The overall prognosis is very good. There is need for greater awareness among physicians for considering BCG related disease processes in patients with past history of BCG installation so appropriate cultures can be send and treatment instituted.
随着人口老龄化的加剧,1期膀胱癌的膀胱内卡介苗植入越来越普遍。卡介苗可被全身吸收,并可在身体几乎任何器官形成肉芽肿,从接种卡介苗后几小时到几年后出现症状。在某些情况下,治疗方法可以从密切观察到使用异烟肼和利福平加或不加类固醇3-9个月。总体预后非常好。有必要提高医生对有卡介苗植入史的患者的卡介苗相关疾病过程的认识,以便进行适当的培养和治疗。
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引用次数: 4
期刊
Mycobacterial diseases : tuberculosis & leprosy
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