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A Liquid Crystal-based Biomaterial Platform for Rapid Sensing of Heat Stress using Machine learning 利用机器学习快速感知热应力的液晶生物材料平台
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-18 DOI: 10.1039/d4sd00213j
Prateek Verma, Elizabeth Adeogun, Elizabeth Greene, Sami Dridi, Ukash Nakarmi, Karthik Nayani
Novel biomaterials that bridge the knowledge gap in coupling molecular/protein signatures of disease/stress via rapid readouts is a critical need of society. One such scenario is an imbalance between bodily heat production and heat dissipation which leads to heat stress in organisms. In addition to diminished animal well-being, heat stress is detrimental to the poultry industry as poultry entails fast growth and high yield, resulting in greater metabolic activity and higher body heat produc-tion. When stressed, cells overexpress heat shock proteins (such as HSP70, a well-established intracellular stress indicator) and may undergo changes in their mechanical properties. Liquid crystals (LCs, fluids with orientational order) are facile sen-sors as they can readily transduce chemical signals to easily observable optical responses. In this work, we introduce a hy-brid LC-cell biomaterial within which the difference in the expression of HSP70 is linked to optical changes in the response pattern via the use of convolutional neural networks (CNNs). The machine-learning (ML) models were trained on hundreds of such LC-response micrographs of chicken red blood cells with and without heat stress. Trained models exhibited remark-able accuracy of up to 99% on detecting the presence of heat stress in unseen microscope samples. We also show that cross-linking the chicken and human RBCs using glutaraldehyde in order to simulate a diseased cell was an efficient strategy for planning, building, training, and evaluating ML models. Overall, our efforts build towards desgining biomaterials that can rapidly detect disease in organisms that is accompanied by a distinct change in the mechanical properties of cells. We aim to eventuate CNN-enabled LC-sensors can rapidly report the presence of disease in scenarios where human judgment could be prohibitively difficult or slow.
新型生物材料通过快速读数弥补了疾病/压力的分子/蛋白质信号耦合方面的知识差距,是社会的迫切需要。其中一种情况是身体产热和散热不平衡,导致生物体产生热应激。除了动物健康受损外,热应激还不利于家禽业,因为家禽需要快速生长和高产,从而导致新陈代谢活动增加,体热产生增加。当受到应激时,细胞会过度表达热休克蛋白(如 HSP70,一种公认的细胞内应激指标),并可能改变其机械特性。液晶(LC,具有定向有序性的流体)是一种简便的感应器,因为它们能轻易地将化学信号转导为易于观察的光学响应。在这项工作中,我们引入了一种混合桥接液晶细胞生物材料,通过使用卷积神经网络(CNN),将 HSP70 表达的差异与响应模式的光学变化联系起来。机器学习(ML)模型是在数百张有热应力和无热应力的鸡红细胞的 LC 反应显微照片上训练出来的。训练后的模型在检测未见显微镜样本中是否存在热应力方面的准确率高达 99%。我们还表明,使用戊二醛交联鸡和人类红细胞以模拟病变细胞是规划、构建、训练和评估 ML 模型的有效策略。总之,我们的努力是为了设计出能快速检测生物体内伴随着细胞机械特性明显变化的疾病的生物材料。我们的目标是使支持 CNN 的液相色谱传感器能够在人类判断过于困难或缓慢的情况下快速报告疾病的存在。
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引用次数: 0
Modulation in the binding sites for adaptable DNA interactive probe: Efficient at chromo-fluorogenic meticulous recognition of Al3+ and its live cell bioimaging 调节 DNA 交互探针的结合位点:高效的 Al3+ 色荧光精细识别及其活细胞生物成像技术
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-18 DOI: 10.1039/d4sd00242c
Atanu Maji, Debarpan Mitra, Amitav Biswas, Moumita Ghosh, Rahul Naskar, Saswati Gharami, Nabendu Murmu, Tapan Kumar Mondal
Herein, a chromone based simple reversible fluorescent “turn-on” probe HMCP [6-(Hydroxymethyl)-N'-((6-methyl-4-oxo-4H-chromen-3-yl)methylene)picolinohydrazide] was successfully introduced to detect Al3+ over a group of other coexisting metal ions in methanol at pH 7.2. The “turn on” emission response along with the effective enhancement in fluorescence intensity upon addition of Al3+ can be attributed to the inhibition of photo-induced electron transfer (PET) and C=N isomerization as well as initiation of Chelation-enhanced-fluorescence (CHEF). The sensor HMCP binds Al3+ in 1:1 stoichiometry with a brilliant binding constant and good detection limit in the order of 103 M-1 and 10-7 M respectively. The binding mode of interaction of HMCP with Al3+ was supported by 1H-NMR titration, HRMS, Job’s plot analysis, theoretical calculations and also by molecular logic gate applications. DNA binding study was also executed to elucidate possible bioactivity and found that HMCP interacts with DNA more effectively over other analogues. Furthermore, the applicability in live cell imaging study indicated that HMCP is highly efficient to detect exogenous Al3+ in living cells. In addition, real sample analysis and dip-stick experiment provide a wide range of practical application of the probe conveniently.
本文成功引入了一种基于铬酮的简单可逆荧光 "开启 "探针 HMCP [6-(Hydroxymethyl)-N'-((6-methyl-4-oxo-4H-chromen-3-yl)methylene)picolinohydrazide] ,用于在 pH 值为 7.2 的甲醇中检测 Al3+,而不是其他共存金属离子。加入 Al3+ 后的 "开启 "发射响应和荧光强度的有效增强可归因于光诱导电子转移(PET)和 C=N 异构化的抑制以及螯合增强荧光(CHEF)的启动。传感器 HMCP 与 Al3+ 的结合比例为 1:1,其结合常数和检测限分别为 103 M-1 和 10-7 M。通过 1H-NMR 滴定、HRMS、约伯图分析、理论计算以及分子逻辑门应用,证明了 HMCP 与 Al3+ 的结合模式。为了阐明可能的生物活性,还进行了 DNA 结合研究,结果发现 HMCP 与 DNA 的相互作用比其他类似物更有效。此外,活细胞成像研究表明,HMCP 能高效检测活细胞中的外源 Al3+。此外,真实样品分析和浸渍棒实验也为探针的实际应用提供了广泛的便利。
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引用次数: 0
Point-of-care Biosensors and Devices for Diagnostics of Chronic Kidney Disease 用于诊断慢性肾病的床旁生物传感器和设备
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-16 DOI: 10.1039/d4sd00241e
Yuan Liu, Xinping Zhao, Min Liao, Guoliang Ke, Xiaobing Zhang
Chronic Kidney Disease (CKD) is a growing global health concern, necessitating early and accurate diagnostic tools to manage and mitigate its progression. Point-of-care (POC) biosensors and devices offer a promising solution for rapid, cost-effective, and accessible diagnostics. This review explores the latest advancements in POC biosensors and devices specifically designed for CKD diagnostics. In this review, we discuss the biosensors most likely to achieve on-site detection of CKD, focusing on their design and application in real samples, including electrochemical, fluorescent, colorimetric sensors. Also, the innovative platforms were summarized from lateral flow devices, lab-on-a-chip devices, and microfluidic-based devices. The potential of these technologies for real-time monitoring, early detection, and personalized treatment is underscored. The review concludes by envisioning future perspectives and the transformative impact of POC biosensors in CKD diagnostics, aiming to improve patient outcomes and healthcare efficiency.
慢性肾脏病(CKD)是一个日益严重的全球性健康问题,需要早期准确的诊断工具来控制和缓解病情发展。床旁 (POC) 生物传感器和设备为快速、经济、方便的诊断提供了一种前景广阔的解决方案。本综述探讨了专为慢性肾功能衰竭诊断设计的 POC 生物传感器和设备的最新进展。在这篇综述中,我们讨论了最有可能实现 CKD 现场检测的生物传感器,重点是它们在真实样本中的设计和应用,包括电化学、荧光和比色传感器。此外,还总结了横向流动装置、片上实验室装置和微流控装置等创新平台。这些技术在实时监测、早期检测和个性化治疗方面的潜力得到了强调。综述最后展望了 POC 生物传感器在 CKD 诊断中的未来前景和变革性影响,旨在改善患者预后和提高医疗效率。
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引用次数: 0
Tumor Diagnosis Based on Nucleolus Labeling 基于核仁标记的肿瘤诊断
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-16 DOI: 10.1039/d4sd00238e
Caiwei Jia, Jiani Gao, Dong Xie, Jin-Ye Wang
The nucleolus is crucial for ribonucleoprotein particle assembly. Vital molecular regulators such as RB (retinoblastoma protein) and p53 (tumor suppressor protein) influence nucleolar function and tumorigenesis. The absence or inactivation of these proteins often leads to nucleolar dysfunction and alteration, which is a key indicator among the primary histopathological features of malignancy. These changes are closely related to the proliferation, differentiation, and survival of tumor cells, such as abnormalities in the number, size, and shape of nucleoli. In recent years, as the relationship between nucleoli and tumorigenesis has been further explored, various nucleolar labeling techniques have been developed for pathological analysis and tumor diagnosis, such as immunohistochemistry (IHC)/immunofluorescence (IF), and fluorescence labeling. These methods complement the traditional use of transmission electron microscopy (TEM) for observing nucleoli. In this review, we explore the relationship between the nucleolus and tumorigenesis and evaluate current methods for diagnosing tumors by examining nucleolar characteristics. We discuss the advantages, disadvantages, and applications of diagnostic techniques such as TEM, IHC/IF, and fluorescence labeling for analyzing the nucleolus.
核仁对于核糖核蛋白颗粒的组装至关重要。RB(视网膜母细胞瘤蛋白)和 p53(肿瘤抑制蛋白)等重要的分子调控因子影响着核小体的功能和肿瘤的发生。这些蛋白的缺失或失活往往会导致核小体功能障碍和改变,这是恶性肿瘤主要组织病理学特征中的一个关键指标。这些变化与肿瘤细胞的增殖、分化和存活密切相关,如核小体的数量、大小和形状异常。近年来,随着人们对核小体与肿瘤发生之间关系的进一步探索,各种用于病理分析和肿瘤诊断的核小体标记技术应运而生,如免疫组织化学(IHC)/免疫荧光(IF)和荧光标记等。这些方法是对传统的透射电子显微镜(TEM)观察核小体的补充。在这篇综述中,我们探讨了核小体与肿瘤发生之间的关系,并评估了目前通过检查核小体特征诊断肿瘤的方法。我们讨论了用于分析核小体的 TEM、IHC/IF 和荧光标记等诊断技术的优缺点和应用。
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引用次数: 0
Recent advances in sensor arrays aided by machine learning for pathogen identification 机器学习辅助病原体识别传感器阵列的最新进展
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-10 DOI: 10.1039/d4sd00229f
Xin Wang, Ting Yang, Jian-Hua Wang
The development of rapid and accurate pathogen detection methods is of paramount importance for slowing the evolution of antibiotic resistance in bacteria. However, the high similarity between different pathogens, especially between antibiotic-sensitive and antibiotic-resistant strains of the same species presents great challenges for the precise discrimination of pathogens. In recent years, chemical nose strategies, i.e. sensor arrays, have achieved certain success in pathogen discrimination. Currently, chemical nose strategies for identifying pathogens are mainly designed from two perspectives: the disparity in extrinsic properties (biomolecules, charge, and hydrophobicity of the bacterial surface) and intrinsic properties (processes and products mediated by bacterial enzymes) among different pathogens. Biosensing probes capable of responding to these properties are introduced for pathogen detection. The output signals are then processed and analyzed by machine learning algorithms to visualize the multidimensional detection results and achieve pathogen discrimination. This paper introduces the latest developments in sensor arrays for pathogen identification based on the extrinsic and intrinsic nature of bacteria, highlights the recognition mechanism of probes for bacteria, and outlines the current challenges and prospects of sensor arrays for pathogen discrimination.
开发快速准确的病原体检测方法对于减缓细菌抗生素耐药性的进化至关重要。然而,不同病原体之间的高度相似性,尤其是同一物种中对抗生素敏感的菌株和对抗生素耐药的菌株之间的高度相似性,给精确分辨病原体带来了巨大挑战。近年来,化学嗅觉策略(即传感器阵列)在病原体鉴别方面取得了一定的成功。目前,识别病原体的化学鼻策略主要从两个方面进行设计:不同病原体的外在特性(细菌表面的生物分子、电荷和疏水性)和内在特性(细菌酶介导的过程和产物)的差异。生物传感探针能够对这些特性做出反应,用于病原体检测。然后通过机器学习算法对输出信号进行处理和分析,使多维检测结果可视化,从而实现病原体鉴别。本文介绍了基于细菌外在和内在特性的病原体识别传感器阵列的最新发展,重点介绍了探针对细菌的识别机制,并概述了当前传感器阵列在病原体鉴别方面面临的挑战和前景。
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引用次数: 0
Compact device prototype for turn-on fluorescent detection of Sarin based on reactive 4,4-diaryloxy-BODIPY derivatives 基于活性 4,4-二叔丁氧基-BODIPY 衍生物的沙林荧光检测紧凑型设备原型
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-10 DOI: 10.1039/d4sd00228h
Lu Liu, Sheng Li, Wendan Luo, Jiashuang Yao, Taihong Liu, Molin Qin, Zhiyan Huang, Liping Ding, Yu Fang
Development of fluorescent indicators for the efficient and accurate detection of lethal nerve agents has evoked extensive interest recently. Herein, we presented two spiranic 4,4-diaryloxy-BODIPY derivatives for efficient and fluorescence turn-on detection of Sarin in solution media. Colorimetric mode featured the merits of obvious color changes from dark to greenish fluorescence under UV light. Generated new fluorescence emission reached their maxima within several minutes and the peaks were assigned for the generated by-product oxo-BDP with ΦF ~ 20% in acetonitrile. The detection limits of two 4,4-diaryloxy-BODIPY for a simulant DCP were determined to be 13.2 nM and 8.2 nM, respectively. The underlying sensing mechanism was clarified as the synergistic effect of 4,4-bond cleaving and fluorescence turn-on related to the photoinduced electron transfer process. Furthermore, a compact tubular sensor and a sensing platform prototype were fabricated properly. Superior detection results and further evaluation for real samples and simulants could be conducted at the sub-mM level on-site. Successful trials aid in understanding the structure-function relationship of 4,4-disubstituted BODIPY chromophores as well as the future development of a miniaturized device prototype for on-site detection of chemical warfare agents.
最近,开发用于高效、准确检测致命神经毒剂的荧光指示剂引起了广泛关注。在此,我们介绍了两种用于在溶液介质中高效荧光检测沙林的 4,4-二芳基-BODIPY 衍生物。比色模式的特点是在紫外光下荧光颜色由深到绿的明显变化。生成的新荧光发射在几分钟内达到最大值,峰为生成的副产物氧代-BDP,在乙腈中ΦF ~ 20%。两种 4,4-二羟基-BODIPY 对模拟物 DCP 的检测限分别为 13.2 nM 和 8.2 nM。其基本传感机制被明确为与光诱导电子转移过程有关的 4,4-键裂解和荧光开启的协同效应。此外,还制作了一个紧凑的管状传感器和一个传感平台原型。卓越的检测结果以及对真实样品和模拟物的进一步评估可以在亚毫克级现场进行。试验的成功有助于了解 4,4-二取代 BODIPY 发色团的结构-功能关系,以及未来用于现场检测化学战剂的微型装置原型的开发。
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引用次数: 0
Outstanding Reviewers for Sensors & Diagnostics in 2023 2023 年传感器与诊断领域的杰出评审员
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-06 DOI: 10.1039/d4sd90030h
We would like to take this opportunity to thank all of Sensors & Diagnostics's reviewers for helping to preserve quality and integrity in chemical science literature. We would also like to highlight the Outstanding Reviewers for Sensors & Diagnostics in 2023.
我们想借此机会感谢《传感器与诊断》杂志的所有审稿人,感谢他们帮助维护化学科学文献的质量和完整性。我们还想重点介绍 2023 年 Sensors & Diagnostics 的杰出审稿人。
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引用次数: 0
An rGO-doped laser induced graphene electrochemical biosensor for highly sensitive exosome detection 用于高灵敏度外泌体检测的掺杂 rGO 的激光诱导石墨烯电化学生物传感器
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-02 DOI: 10.1039/d4sd00181h
Xiaoshuang Chen, Xiaohui Yan, Jiaoyan Qiu, Xue Zhang, Yunhong Zhang, Hongpeng Zhou, Yujuan Zhao, Lin Han, Yu Zhang
In this study, we developed a novel electrochemical sensing chip integrated with reduced graphene oxide (rGO) with laser-induced graphene (LIG) for the detection of exosomes associated with breast cancer biomarkers. Employing laser-induced technology, a three-dimensional porous graphene material is fabricated on the surface of a flexible polyimide film, which is subsequently combined with rGO through π–π stacking. This integration facilitates the doping of two-dimensional and three-dimensional material (2D/3D) structures, significantly enhancing the conductivity of the electrode material. Additionally, this approach markedly improves the surface hydrophobicity and biomolecule affinity of LIG, optimizing the immobilization of specific antibodies for exosomes. Importantly, this experiment marks the first occasion of merging two-dimensional rGO with three-dimensional LIG, resulting in the construction of a high-performance biosensing chip that enables specific capture and highly sensitive detection of exosomes. Under optimized conditions, the quantitative detection range for exosomes is established at 5 × 102 to 5 × 105 particles per μL, with a limit of detection (LOD) of 166 particles per μL. The biosensor is successfully used to analyze exosomes in breast cancer cell lines and patient serum samples, proving its practical application. This electrochemical biosensing chip offers significant practical application value in the early screening and diagnosis of diseases.
在这项研究中,我们开发了一种集成了还原氧化石墨烯(rGO)和激光诱导石墨烯(LIG)的新型电化学传感芯片,用于检测与乳腺癌生物标志物相关的外泌体。利用激光诱导技术,在柔性聚酰亚胺薄膜表面制造出三维多孔石墨烯材料,随后通过π-π堆叠将其与还原型氧化石墨烯结合在一起。这种整合方式有助于掺杂二维和三维材料(2D/3D)结构,从而显著提高电极材料的导电性。此外,这种方法还明显改善了 LIG 的表面疏水性和生物大分子亲和性,优化了外泌体特异性抗体的固定。重要的是,该实验首次将二维 rGO 与三维 LIG 相结合,从而构建了一种高性能生物传感芯片,可实现外泌体的特异性捕获和高灵敏度检测。在优化条件下,外泌体的定量检测范围为每微升 5 × 102 至 5 × 105 个颗粒,检测限(LOD)为每微升 166 个颗粒。该生物传感器成功用于分析乳腺癌细胞系和患者血清样本中的外泌体,证明了它的实际应用价值。这种电化学生物传感芯片在疾病的早期筛查和诊断方面具有重要的实际应用价值。
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引用次数: 0
Clozapine sensing through paper-based microfluidic sensors directly modified via electro-deposition and electro-polymerization 通过电沉积和电聚合直接修饰的纸基微流体传感器传感氯氮平
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-28 DOI: 10.1039/d4sd00252k
Mohammad Hossein Ghanbari, Markus Biesalski, Oliver Friedrich, Bastian J. M. Etzold
Microfluidic electrochemical sensors (μCS) can be portable, highly sensitive, and low-cost but are less frequently studied nor applied. Additionally, simultaneous electro-deposition of gold nanoparticles (ED (AuNPs)) and electro-polymerization of L-cysteine (EP (L-cys)) are introduced for the first time for modifying the surface of the working electrode through a paper-based microfluidic sensor. This study depicts that by employing such modification, the electrochemically active surface area (ECSA) and the electron transfer rate are increased together and result in improved sensitivity. The modified μCS is depicted to enable sensitive voltametric determination of, e.g., clozapine (CLZ), an anti-psychotic drug to treat schizophrenia. The proposed sensor was characterized by different techniques, and several key parameters were optimized. Under the optimum conditions and using square-wave voltametry (SWV), a linear dose–response for a concentration range from 0.5 to 10.0 μM of CLZ was achieved. The limit of detection and sensitivity resulted in 70.0 nM and 0.045 mA cm−2 μM−1, respectively. Besides, this excellent sensitivity combines with high stability, which was tested for six repetitive measurements with a single device resulting in high reproducibility. Additionally, this procedure was validated with measurements of clozapine in human blood plasma, which demonstrated the excellent applicability of the device, rendering it a promising platform for point-of-care diagnostics and environmental monitoring.
微流控电化学传感器(μCS)具有便携、高灵敏度和低成本等特点,但研究和应用都不多。此外,该研究首次引入了同时电沉积金纳米粒子(ED (AuNPs))和电聚合 L-半胱氨酸(EP (L-cys))的方法,通过纸基微流体传感器对工作电极表面进行改性。这项研究表明,通过采用这种改性方法,电化学活性表面积(ECSA)和电子转移率同时增加,从而提高了灵敏度。改进后的μCS可灵敏地测定氯氮平(CLZ)等药物的伏安测定,氯氮平是一种治疗精神分裂症的抗精神病药物。通过不同的技术对所提出的传感器进行了表征,并对几个关键参数进行了优化。在最佳条件下,利用方波伏安法(SWV),在 0.5 至 10.0 μM 的 CLZ 浓度范围内实现了线性剂量反应。检测限和灵敏度分别为 70.0 nM 和 0.045 mA cm-2 μM-1。此外,这种出色的灵敏度与高稳定性相结合,通过对单个装置进行六次重复测量的测试,结果表明具有很高的重现性。此外,该程序还通过测量人血浆中的氯氮平进行了验证,证明了该装置的卓越适用性,使其成为一个很有前途的床旁诊断和环境监测平台。
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引用次数: 0
Development of a portable electrochemical sensing platform for impedance spectroscopy-based biosensing using an ARM-based microcontroller 利用基于 ARM 的微控制器开发基于阻抗光谱生物传感的便携式电化学传感平台
Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-24 DOI: 10.1039/d4sd00234b
Joseph Charles Khavul Spiro, Kundan Kumar Mishra, Vikram Narayanan Dhamu, Avi Bhatia, Sriram Muthukumar, Shalini Prasad
Detecting pesticides like atrazine is a significant global health challenge due to their association with numerous foodborne illnesses. Traditional detection methods often lack sensitivity and time efficiency, highlighting the urgent need for improved early detection techniques to mitigate pesticide contamination and outbreaks. This study introduces a novel portable electrochemical prototype that integrates an ARM-based microcontroller with an impedance spectroscopy (EIS)-based biosensing system. The data processed through the algorithm generates easily interpretable impedance values. The platform demonstrates a broad detection range for atrazine (1 fg mL−1 to 10 ng mL−1) with a limit of detection (LoD) of 1 fg mL−1 and an assay processing time of approximately 5 minutes, showcasing its remarkable efficiency. The sensor consistently maintains cross-reactivity variation below 20%, ensuring reliable performance. This research aims to offer a low-cost, replicable mobile platform for biosensing applications, thereby enhancing access for individuals with limited lab-based research experience and broadening the scope of proactive pesticide monitoring.
由于阿特拉津等农药与多种食源性疾病有关,因此检测这类农药是一项重大的全球健康挑战。传统的检测方法往往缺乏灵敏度和时间效率,因此迫切需要改进早期检测技术,以减少农药污染和疫情爆发。本研究介绍了一种新型便携式电化学原型,它将基于 ARM 的微控制器与基于阻抗光谱(EIS)的生物传感系统集成在一起。通过算法处理的数据可生成易于解释的阻抗值。该平台对阿特拉津的检测范围很广(1 fg mL-1 至 10 ng mL-1),检测限(LoD)为 1 fg mL-1,检测处理时间约为 5 分钟,显示了其卓越的效率。该传感器的交叉反应变异始终保持在 20% 以下,确保了可靠的性能。这项研究旨在为生物传感应用提供一个低成本、可复制的移动平台,从而为实验室研究经验有限的人员提供更多机会,并扩大农药主动监测的范围。
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引用次数: 0
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Sensors & diagnostics
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