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Recent advances in sensor arrays aided by machine learning for pathogen identification 机器学习辅助病原体识别传感器阵列的最新进展
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-10 DOI: 10.1039/D4SD00229F
Xin Wang, Ting Yang and Jian-Hua Wang

The development of rapid and accurate pathogen detection methods is of paramount importance for slowing the evolution of antibiotic resistance in bacteria. However, the high similarity between different pathogens, especially between antibiotic-sensitive and antibiotic-resistant strains of the same species, presents great challenges for the precise discrimination of pathogens. In recent years, chemical nose strategies, i.e. sensor arrays, have achieved certain success in pathogen discrimination. Currently, chemical nose strategies for identifying pathogens are mainly designed from two perspectives: the disparity in extrinsic properties (biomolecules, charge, and hydrophobicity of the bacterial surface) and intrinsic properties (processes and products mediated by bacterial enzymes) among different pathogens. Biosensing probes capable of responding to these properties are introduced for pathogen detection. The output signals are then processed and analyzed by machine learning algorithms to visualize the multidimensional detection results and achieve pathogen discrimination. This paper introduces the latest developments in sensor arrays for pathogen identification based on the extrinsic and intrinsic nature of bacteria, highlights the recognition mechanism of probes for bacteria, and outlines the current challenges and prospects of sensor arrays for pathogen discrimination.

开发快速准确的病原体检测方法对于减缓细菌抗生素耐药性的进化至关重要。然而,不同病原体之间的高度相似性,尤其是同一物种中对抗生素敏感的菌株和对抗生素耐药的菌株之间的高度相似性,给精确分辨病原体带来了巨大挑战。近年来,化学嗅觉策略(即传感器阵列)在病原体鉴别方面取得了一定的成功。目前,识别病原体的化学鼻策略主要从两个方面进行设计:不同病原体的外在特性(细菌表面的生物分子、电荷和疏水性)和内在特性(细菌酶介导的过程和产物)的差异。生物传感探针能够对这些特性做出反应,用于病原体检测。然后通过机器学习算法对输出信号进行处理和分析,使多维检测结果可视化,从而实现病原体鉴别。本文介绍了基于细菌外在和内在特性的病原体识别传感器阵列的最新发展,重点介绍了探针对细菌的识别机制,并概述了当前传感器阵列在病原体鉴别方面面临的挑战和前景。
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引用次数: 0
Compact device prototype for turn-on fluorescence detection of sarin based on reactive 4,4-diaryloxy-BODIPY derivatives† 基于活性 4,4-二叔丁氧基-BODIPY 衍生物的沙林荧光检测紧凑型设备原型
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-10 DOI: 10.1039/D4SD00228H
Lu Liu, Sheng Li, Wendan Luo, Jiashuang Yao, Taihong Liu, Molin Qin, Zhiyan Huang, Liping Ding and Yu Fang

Development of fluorescence indicators for efficient and accurate detection of lethal nerve agents has evoked extensive interest recently. Herein, we presented two spiranic 4,4-diaryloxy-BODIPY derivatives for efficient and fluorescence turn-on detection of sarin in solution media. A colorimetric mode featured the merits of obvious color changes from dark to greenish fluorescence under UV light. The generated new fluorescence emissions reached their maxima within several minutes and the peaks were assigned to the generated by-product oxo-BDP with a fluorescence quantum yield (ΦF) ∼ 20% in acetonitrile. The detection limits of two 4,4-diaryloxy-BODIPYs for a simulant diethylchlorophosphate (DCP) were determined to be 13.2 nM and 8.2 nM, respectively. The underlying sensing mechanism was clarified as the synergistic effect of 4,4-bond cleaving and fluorescence turn-on related to the photoinduced electron transfer process. Furthermore, a compact tubular sensor and a sensing platform prototype were fabricated properly. Superior detection results and further evaluation for real samples and simulants could be conducted at the sub-mM level on-site. Successful trials aid in understanding the structure–function relationship of 4,4-disubstituted BODIPY chromophores as well as the future development of a miniaturized device prototype for on-site detection of chemical warfare agents.

最近,开发用于高效、准确检测致命神经毒剂的荧光指示剂引起了广泛关注。在此,我们介绍了两种用于在溶液介质中高效荧光检测沙林的 4,4-二芳基-BODIPY 衍生物。比色模式的特点是在紫外光下荧光颜色由深到绿的明显变化。生成的新荧光发射在几分钟内达到最大值,峰为生成的副产物氧代-BDP,在乙腈中ΦF ~ 20%。两种 4,4-二羟基-BODIPY 对模拟物 DCP 的检测限分别为 13.2 nM 和 8.2 nM。其基本传感机制被明确为与光诱导电子转移过程有关的 4,4-键裂解和荧光开启的协同效应。此外,还制作了一个紧凑的管状传感器和一个传感平台原型。卓越的检测结果以及对真实样品和模拟物的进一步评估可以在亚毫克级现场进行。试验的成功有助于了解 4,4-二取代 BODIPY 发色团的结构-功能关系,以及未来用于现场检测化学战剂的微型装置原型的开发。
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引用次数: 0
Outstanding Reviewers for Sensors & Diagnostics in 2023 2023 年传感器与诊断领域的杰出评审员
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-06 DOI: 10.1039/D4SD90030H

We would like to take this opportunity to thank all of Sensors & Diagnostics's reviewers for helping to preserve quality and integrity in chemical science literature. We would also like to highlight the Outstanding Reviewers for Sensors & Diagnostics in 2023.

我们想借此机会感谢《传感器与诊断》杂志的所有审稿人,感谢他们帮助维护化学科学文献的质量和完整性。我们还想重点介绍 2023 年 Sensors & Diagnostics 的杰出审稿人。
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引用次数: 0
An rGO-doped laser induced graphene electrochemical biosensor for highly sensitive exosome detection 用于高灵敏度外泌体检测的掺杂 rGO 的激光诱导石墨烯电化学生物传感器
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-02 DOI: 10.1039/D4SD00181H
Xiaoshuang Chen, Xiaohui Yan, Jiaoyan Qiu, Xue Zhang, Yunhong Zhang, Hongpeng Zhou, Yujuan Zhao, Lin Han and Yu Zhang

In this study, we developed a novel electrochemical sensing chip integrated with reduced graphene oxide (rGO) with laser-induced graphene (LIG) for the detection of exosomes associated with breast cancer biomarkers. Employing laser-induced technology, a three-dimensional porous graphene material is fabricated on the surface of a flexible polyimide film, which is subsequently combined with rGO through π–π stacking. This integration facilitates the doping of two-dimensional and three-dimensional material (2D/3D) structures, significantly enhancing the conductivity of the electrode material. Additionally, this approach markedly improves the surface hydrophobicity and biomolecule affinity of LIG, optimizing the immobilization of specific antibodies for exosomes. Importantly, this experiment marks the first occasion of merging two-dimensional rGO with three-dimensional LIG, resulting in the construction of a high-performance biosensing chip that enables specific capture and highly sensitive detection of exosomes. Under optimized conditions, the quantitative detection range for exosomes is established at 5 × 102 to 5 × 105 particles per μL, with a limit of detection (LOD) of 166 particles per μL. The biosensor is successfully used to analyze exosomes in breast cancer cell lines and patient serum samples, proving its practical application. This electrochemical biosensing chip offers significant practical application value in the early screening and diagnosis of diseases.

在这项研究中,我们开发了一种集成了还原氧化石墨烯(rGO)和激光诱导石墨烯(LIG)的新型电化学传感芯片,用于检测与乳腺癌生物标志物相关的外泌体。利用激光诱导技术,在柔性聚酰亚胺薄膜表面制造出三维多孔石墨烯材料,随后通过π-π堆叠将其与还原型氧化石墨烯结合在一起。这种整合方式有助于掺杂二维和三维材料(2D/3D)结构,从而显著提高电极材料的导电性。此外,这种方法还明显改善了 LIG 的表面疏水性和生物大分子亲和性,优化了外泌体特异性抗体的固定。重要的是,该实验首次将二维 rGO 与三维 LIG 相结合,从而构建了一种高性能生物传感芯片,可实现外泌体的特异性捕获和高灵敏度检测。在优化条件下,外泌体的定量检测范围为每微升 5 × 102 至 5 × 105 个颗粒,检测限(LOD)为每微升 166 个颗粒。该生物传感器成功用于分析乳腺癌细胞系和患者血清样本中的外泌体,证明了它的实际应用价值。这种电化学生物传感芯片在疾病的早期筛查和诊断方面具有重要的实际应用价值。
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引用次数: 0
Clozapine sensing through paper-based microfluidic sensors directly modified via electro-deposition and electro-polymerization† 通过电沉积和电聚合直接修饰的纸基微流体传感器传感氯氮平
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-28 DOI: 10.1039/D4SD00252K
Mohammad Hossein Ghanbari, Markus Biesalski, Oliver Friedrich and Bastian J. M. Etzold

Microfluidic electrochemical sensors (μCS) can be portable, highly sensitive, and low-cost but are less frequently studied nor applied. Additionally, simultaneous electro-deposition of gold nanoparticles (ED (AuNPs)) and electro-polymerization of L-cysteine (EP (L-cys)) are introduced for the first time for modifying the surface of the working electrode through a paper-based microfluidic sensor. This study depicts that by employing such modification, the electrochemically active surface area (ECSA) and the electron transfer rate are increased together and result in improved sensitivity. The modified μCS is depicted to enable sensitive voltametric determination of, e.g., clozapine (CLZ), an anti-psychotic drug to treat schizophrenia. The proposed sensor was characterized by different techniques, and several key parameters were optimized. Under the optimum conditions and using square-wave voltametry (SWV), a linear dose–response for a concentration range from 0.5 to 10.0 μM of CLZ was achieved. The limit of detection and sensitivity resulted in 70.0 nM and 0.045 mA cm−2 μM−1, respectively. Besides, this excellent sensitivity combines with high stability, which was tested for six repetitive measurements with a single device resulting in high reproducibility. Additionally, this procedure was validated with measurements of clozapine in human blood plasma, which demonstrated the excellent applicability of the device, rendering it a promising platform for point-of-care diagnostics and environmental monitoring.

微流控电化学传感器(μCS)具有便携、高灵敏度和低成本等特点,但研究和应用都不多。此外,该研究首次引入了同时电沉积金纳米粒子(ED (AuNPs))和电聚合 L-半胱氨酸(EP (L-cys))的方法,通过纸基微流体传感器对工作电极表面进行改性。这项研究表明,通过采用这种改性方法,电化学活性表面积(ECSA)和电子转移率同时增加,从而提高了灵敏度。改进后的μCS可灵敏地测定氯氮平(CLZ)等药物的伏安测定,氯氮平是一种治疗精神分裂症的抗精神病药物。通过不同的技术对所提出的传感器进行了表征,并对几个关键参数进行了优化。在最佳条件下,利用方波伏安法(SWV),在 0.5 至 10.0 μM 的 CLZ 浓度范围内实现了线性剂量反应。检测限和灵敏度分别为 70.0 nM 和 0.045 mA cm-2 μM-1。此外,这种出色的灵敏度与高稳定性相结合,通过对单个装置进行六次重复测量的测试,结果表明具有很高的重现性。此外,该程序还通过测量人血浆中的氯氮平进行了验证,证明了该装置的卓越适用性,使其成为一个很有前途的床旁诊断和环境监测平台。
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引用次数: 0
Development of a portable electrochemical sensing platform for impedance spectroscopy-based biosensing using an ARM-based microcontroller† 利用基于 ARM 的微控制器开发基于阻抗光谱生物传感的便携式电化学传感平台
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-24 DOI: 10.1039/D4SD00234B
Joseph Charles Khavul Spiro, Kundan Kumar Mishra, Vikram Narayanan Dhamu, Avi Bhatia, Sriram Muthukumar and Shalini Prasad

Detecting pesticides like atrazine is a significant global health challenge due to their association with numerous foodborne illnesses. Traditional detection methods often lack sensitivity and time efficiency, highlighting the urgent need for improved early detection techniques to mitigate pesticide contamination and outbreaks. This study introduces a novel portable electrochemical prototype that integrates an ARM-based microcontroller with an impedance spectroscopy (EIS)-based biosensing system. The data processed through the algorithm generates easily interpretable impedance values. The platform demonstrates a broad detection range for atrazine (1 fg mL−1 to 10 ng mL−1) with a limit of detection (LoD) of 1 fg mL−1 and an assay processing time of approximately 5 minutes, showcasing its remarkable efficiency. The sensor consistently maintains cross-reactivity variation below 20%, ensuring reliable performance. This research aims to offer a low-cost, replicable mobile platform for biosensing applications, thereby enhancing access for individuals with limited lab-based research experience and broadening the scope of proactive pesticide monitoring.

由于阿特拉津等农药与多种食源性疾病有关,因此检测这类农药是一项重大的全球健康挑战。传统的检测方法往往缺乏灵敏度和时间效率,因此迫切需要改进早期检测技术,以减少农药污染和疫情爆发。本研究介绍了一种新型便携式电化学原型,它将基于 ARM 的微控制器与基于阻抗光谱(EIS)的生物传感系统集成在一起。通过算法处理的数据可生成易于解释的阻抗值。该平台对阿特拉津的检测范围很广(1 fg mL-1 至 10 ng mL-1),检测限(LoD)为 1 fg mL-1,检测处理时间约为 5 分钟,显示了其卓越的效率。该传感器的交叉反应变异始终保持在 20% 以下,确保了可靠的性能。这项研究旨在为生物传感应用提供一个低成本、可复制的移动平台,从而为实验室研究经验有限的人员提供更多机会,并扩大农药主动监测的范围。
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引用次数: 0
The importance of antibody orientation for enhancing sensitivity and selectivity in lateral flow immunoassays 抗体定向对提高横向流动免疫测定灵敏度和选择性的重要性
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-23 DOI: 10.1039/D4SD00206G
Zhao-Yu Lu and Yang-Hsiang Chan

In the field of point-of-care diagnostics, lateral flow assays (LFAs) stand out as highly promising due to their compact size, ease of use, and rapid analysis times. These attributes make LFAs invaluable, especially in urgent situations or resource-limited regions. However, their Achilles' heel has always been their limited sensitivity and selectivity. To address these issues, various innovative approaches, including sample enrichment, assay optimization, and signal amplification, have been developed and are extensively discussed in the literature. Despite these advancements, the importance of antibody orientation is often neglected, even though improper orientation can significantly impair detection performance. This review article first explores well-established traditional methodologies, such as minor physical adjustments and non-specific chemical bond formations. It then shifts focus to the oriented immobilization of antibodies on probe surfaces. This approach aims to enhance sensitivity and selectivity fundamentally by leveraging protein affinities or complementary amino acid sequences. The review summarizes the impact of antibody orientation on the analytical performance of LFAs in terms of sensitivity, specificity, speed, reliability, cost-effectiveness, and stability. Additionally, we introduce recent modifications to assay membrane materials and discuss the current limitations and future prospects of LFAs.

在护理点诊断领域,横向流动分析法(LFA)因其体积小、使用方便和分析时间快而大有可为。这些特性使 LFA 具有无价之宝的价值,尤其是在紧急情况下或资源有限的地区。然而,它们的致命弱点始终是灵敏度和选择性有限。为了解决这些问题,人们开发了各种创新方法,包括样品富集、检测优化和信号放大,并在文献中进行了广泛讨论。尽管取得了这些进步,但抗体定向的重要性往往被忽视,尽管不正确的定向会严重影响检测性能。这篇综述文章首先探讨了成熟的传统方法,如微小的物理调整和非特异性化学键的形成。然后将重点转向探针表面抗体的定向固定。这种方法旨在利用蛋白质亲和性或互补氨基酸序列,从根本上提高灵敏度和选择性。综述总结了抗体定向在灵敏度、特异性、速度、可靠性、成本效益和稳定性等方面对 LFA 分析性能的影响。此外,我们还介绍了最近对检测膜材料的改良,并讨论了 LFA 目前的局限性和未来前景。
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引用次数: 0
Colorimetric nano-biosensor for low-resource settings: insulin as a model biomarker 用于低资源环境的比色纳米生物传感器:以胰岛素为模型生物标记物
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-23 DOI: 10.1039/D4SD00197D
Zia ul Quasim Syed, Sathya Samaraweera, Zhuo Wang and Sadagopan Krishnan

Biomarkers provide critical molecular insights into diseases and abnormal conditions. However, detecting them at ultra-low concentrations is a challenge, particularly in areas with limited resources and access to sophisticated instruments. Our research is primarily focused on mitigating this challenge. In this report, we introduce a colorimetric immunosensor for detecting insulin, an essential hormone biomarker that regulates glucose metabolism, at picomolar concentrations using citrate-functionalized magnetic particles. This immunosensor utilizes a two-antibody sandwich immunoassay: one antibody is covalently conjugated to the nanoparticles to capture and isolate the target marker, while the other is labeled with horseradish peroxidase for colorimetric detection of insulin. We conducted comparative analyses of insulin detection in buffer, saliva, and serum samples, offering valuable analytical insights. Our findings indicate a detection limit of 10 pM, with dynamic ranges of 10 pM to 1 nM, 10 pM to 10 nM, and 50 pM to 1 nM for insulin detection in buffer solution, 2-fold diluted serum, and 20-fold diluted artificial saliva, respectively. We demonstrate the application of the color immunosensor to type 1 diabetes and healthy human serum samples. For human saliva analysis, the detection limit needs to be improved in our future studies. Overall, our study enhances biomarker analysis in biofluids through an equipment-free colorimetric method, which is particularly relevant for point-of-need applications.

生物标记物提供了有关疾病和异常状况的重要分子信息。然而,在超低浓度下检测它们是一项挑战,尤其是在资源和精密仪器有限的地区。我们的研究主要集中在缓解这一挑战上。在本报告中,我们介绍了一种比色免疫传感器,利用柠檬酸盐功能化磁性微粒在皮摩尔浓度下检测胰岛素(一种调节葡萄糖代谢的重要激素生物标志物)。这种免疫传感器采用双抗体夹心免疫测定法:一种抗体与纳米粒子共价结合以捕获和分离目标标记物,另一种抗体用辣根过氧化物酶标记,用于胰岛素的比色检测。我们对缓冲液、唾液和血清样品中的胰岛素检测进行了比较分析,从而提供了宝贵的分析见解。我们的研究结果表明,在缓冲溶液、稀释 2 倍的血清和稀释 20 倍的人工唾液中检测胰岛素的检测限为 10 pM,动态范围分别为 10 pM 至 1 nM、10 pM 至 10 nM 和 50 pM 至 1 nM。我们展示了彩色免疫传感器在 1 型糖尿病和健康人血清样本中的应用。在人体唾液分析方面,我们需要在今后的研究中提高检测限。总之,我们的研究通过一种无需设备的比色法提高了生物流体中生物标记物的分析能力,尤其适用于需求点应用。
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引用次数: 0
Solid-state nanopore counting of amplicons from recombinase polymerase isothermal amplification† 对重组酶聚合酶等温扩增产生的扩增子进行固态纳米孔计数
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-23 DOI: 10.1039/D4SD00159A
Breeana Elliott, Martin Charron, John Pezacki, Erin McConnell and Vincent Tabard-Cossa

Single-molecule detection methods based on electrical readout can transform disease diagnostics by miniaturizing the downstream sensor to enable sensitive and rapid biomarker quantification at the point-of-care. In particular, solid-state nanopores can be used as single-molecule electrical counters for a variety of biomedical applications, including biomarker detection. Integrating nanopores with efficient DNA amplification methods can improve upon sensitivity and accessibility concerns often present in disease detection. Here, we present nanopores as biosensors downstream of a reverse-transcription recombinase polymerase amplification (RT-RPA)-based assay targeting synthetic SARS-CoV-2 RNA. We demonstrate the efficacy of nanopore-integrated RT-RPA for the direct electrical detection of target amplicons, and discuss challenges from RPA-based assays and adaptations that facilitate solid-state nanopore readout.

基于电读出的单分子检测方法可通过微型化下游传感器,在医疗点实现灵敏、快速的生物标记物定量,从而改变疾病诊断方法。特别是,固态纳米孔可用作单分子电计数器,用于各种生物医学应用,包括生物标记物检测。将纳米孔与高效的 DNA 扩增方法相结合,可以改善疾病检测中经常出现的灵敏度和可及性问题。在这里,我们将纳米孔作为生物传感器,用于基于反转录重组聚合酶扩增(RT-RPA)的以合成 SARS-CoV-2 RNA 为目标的检测。我们展示了集成纳米孔的 RT-RPA 在直接电学检测目标扩增子方面的功效,并讨论了基于 RPA 的检测方法所面临的挑战以及促进固态纳米孔读出的适应性。
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引用次数: 0
In situ interface reaction-enabled electrochemiluminescence imaging for single-cell formaldehyde release analysis† 用于单细胞甲醛释放分析的原位界面反应电化学发光成像†.
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-20 DOI: 10.1039/D4SD00177J
Juanhua Zhou and Yang Liu

Monitoring metabolites in situ at the single-cell scale is important for revealing cellular heterogeneity and dynamic changes of cell status, which provides new possibilities for disease research. Benefiting from the advantages of both electrochemical and optical methods, electrochemiluminescence (ECL) has great potential in this field. However, developing real-time in situ imaging methods is full of challenges. In this study, an ECL imaging method for formaldehyde (FA), a kind of cellular metabolite, was developed based on the in situ generation of co-reactants at the electrode interface and was successfully applied to the monitoring of single-cell FA release. Amino groups can undergo a rapid nucleophilic addition reaction with FA to form amino alcohol intermediates, which can be used as co-reactants for tris(2,2′-bipyridyl)ruthenium(II) [Ru(bpy)32+] to significantly enhance the strength of ECL. Poly(amidoamine) (PAMAM), with a large number of amino groups, and reduced graphene oxide (rGO), with excellent electrical conductivity and electrocatalytic properties, were introduced as the modification layer on the electrode surface to realize the “turn on” detection of FA. This sensing method also eliminated the use of the classic toxic co-reactant tripropylamine (TPrA) and was further applied to in situ imaging of single-cell FA release. It successfully obtained ECL images at different time points after the stimulation of HeLa cells with thapsigargin (TG), revealing the change pattern in drug efficacy over time. This work proposes a new ECL imaging approach for real-time in situ monitoring of FA release from single cells, further broadening the application of ECL imaging in single-cell analysis.

在单细胞尺度上原位监测代谢物对于揭示细胞异质性和细胞状态的动态变化非常重要,这为疾病研究提供了新的可能性。得益于电化学和光学方法的优势,电化学发光(ECL)在这一领域具有巨大潜力。然而,开发实时原位成像方法充满挑战。本研究基于电极界面原位生成共反应物的原理,开发了一种针对细胞代谢物甲醛(FA)的 ECL 成像方法,并成功应用于单细胞 FA 释放的监测。氨基可与 FA 发生快速亲核加成反应,形成氨基醇中间体,这些中间体可用作三(2,2′-联吡啶)钌(II) [Ru(bpy)32+] 的共反应物,从而显著增强 ECL 的强度。电极表面引入了具有大量氨基的聚氨基胺(PAMAM)和具有优异导电性和电催化性能的还原氧化石墨烯(rGO)作为修饰层,实现了 FA 的 "开启 "检测。这种传感方法还省去了传统的有毒共反应物三丙胺(TPrA),并进一步应用于单细胞 FA 释放的原位成像。该方法成功地获得了用硫代甘氨酸(TG)刺激 HeLa 细胞后不同时间点的 ECL 图像,揭示了药效随时间的变化规律。这项工作提出了一种新的 ECL 成像方法,用于实时原位监测单细胞中 FA 的释放,进一步拓宽了 ECL 成像在单细胞分析中的应用。
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引用次数: 0
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