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[Recessive resistance to plant viruses by the deficiency of eukaryotic translation initiation factor genes.] 真核翻译起始因子基因缺失对植物病毒的隐性抗性
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.61
Yuji Fujimoto, Masayoshi Hashimoto, Yasuyuki Yamaji

Plant viruses, obligate parasitic pathogens, utilize a variety of host plant factors in the process of their infection due to the limited number of genes encoded in their own genomes. The genes encoding these host factors are called susceptibility genes because they are responsible for the susceptibility of plants to viruses. Plants lacking or having mutations in a susceptibility gene essential for the infection of a virus acquire resistance to the virus. Such resistance trait is called recessive resistance because of the recessive inherited characteristics. Recessive resistance is reported to account for about half of the plant viral resistance loci mapped in known cultivated crops. Eukaryotic translation initiation factor (eIF) 4E family genes are well-known susceptibility genes. Although there are many reports about eIF4E-mediated recessive resistance to plant viruses, the mechanistic insight of the resistance is still limited. Here we review focusing on studies that have elucidated the mechanism of eIF4E-mediated recessive resistance.

植物病毒是专性寄生病原体,由于其自身基因组中编码的基因数量有限,因此在感染过程中利用了多种寄主植物因子。编码这些寄主因子的基因被称为易感基因,因为它们负责植物对病毒的易感性。缺乏或具有感染病毒所必需的易感基因突变的植物获得了对病毒的抗性。由于具有隐性遗传特性,这种抗性性状被称为隐性抗性。据报道,在已知栽培作物中,隐性抗性约占植物病毒抗性位点的一半。真核生物翻译起始因子(eIF) 4E家族基因是众所周知的易感基因。虽然有许多关于eif4e介导的植物病毒隐性抗性的报道,但对其机制的了解仍然有限。本文综述了eif4e介导的隐性耐药机制的研究进展。
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引用次数: 1
[Synthetic Biology × Bacteriophage]. 合成生物学×噬菌体。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.57
Hiroki Ando
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引用次数: 0
[Basic information of Coronavirus]. 【冠状病毒基本信息】。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.29
Wataru Kamitani

Coronaviruses are pathogens that infect many of animals, resulting in respiratory or enteric diseases. Coronaviruses constitute Nidovirales together with Arteriviridae. Most of human coronaviruses are known to cause mild illness and common cold. However, an epidemic of severe acute respiratory syndrome (SARS) occurred in 2002, ten years after SARS epidemic Middle East respiratory syndrome (MERS) emerged in 2012. Now, we face on a novel coronavirus which emerges in end of 2019. This novel coronavirus is named as SARS-CoV-2. SARS-CoV-2 is spread to worldwide within one to two months and causes coronavirus disease 2019 (COVID-19), respiratory illness. Coronaviruses are enveloped viruses possessing a positive-sense and large single stranded RNA genomes. The 5' two-thirds of the CoV genome consists of two overlapping open reading frames (ORFs 1a and 1b) that encode non-structural proteins (nsps). The other one-third of the genome consists of ORFs encoding structural proteins, including spike (S), membrane (M), envelope (E) and nucleocapsid (N) proteins, and accessory proteins. Upon infection of CoV into host cells, the translation of two precursor polyproteins, pp1a and pp1ab, occurs and these polyproteins are cleaved into 16 nsps by viral proteases. Structural proteins assemble to the vesicles located from ER to Golgi (ER Golgiintermediate compartment) and virions bud into the vesicles. Virions are released from infectedcells via exocytosis.

冠状病毒是感染许多动物的病原体,导致呼吸道或肠道疾病。冠状病毒与动脉病毒科共同构成病毒科。已知大多数人类冠状病毒会引起轻微疾病和普通感冒。然而,在2012年SARS疫情中东呼吸综合征(MERS)出现10年后,2002年发生了严重急性呼吸综合征(SARS)疫情。现在,我们面临着2019年底出现的新型冠状病毒。这种新型冠状病毒被命名为SARS-CoV-2。SARS-CoV-2在一到两个月内传播到全球,并导致2019冠状病毒病(COVID-19),即呼吸道疾病。冠状病毒是包膜病毒,具有正义和大单链RNA基因组。冠状病毒基因组的5' 2 / 3由两个重叠的开放阅读框(ORFs 1a和1b)组成,它们编码非结构蛋白(nsps)。另外三分之一的基因组由编码结构蛋白的orf组成,包括穗蛋白(S)、膜蛋白(M)、包膜蛋白(E)和核衣壳蛋白(N)以及辅助蛋白。冠状病毒感染宿主细胞后,发生两种前体多蛋白pp1a和pp1ab的翻译,这些多蛋白被病毒蛋白酶切割成16个nsps。结构蛋白聚集到位于内质网至高尔基体(内质网高尔基中间室)的囊泡中,病毒粒子进入囊泡。病毒粒子通过胞吐作用从被感染的细胞中释放出来。
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引用次数: 0
[Arthropod-borne viruses (arboviruses)]. 节肢动物传播的病毒(虫媒病毒)。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.3
Yasuko Orba, Hirofumi Sawa, Keita Matsuno

"Arbovirus" is a term for a virus transmitted to mammals by hematophagous arthropods; arboviruses; replicate in both mammals and arthropods. Since the life cycle of arboviruses is highly dependent on arthropods, control of the arthropods (vectors) is generally considered important for the control of arbovirus infection. Various pathogens that cause diseases in the medical and veterinary fields are grouped into arboviruses with a history of their discoveries since the early 20th century. Furthermore, because of recent advances in sequencing technology, new arboviruses have been discovered one after another. Here we would like to overview the known arboviruses and their infections.

“虫媒病毒”是指一种通过食血节肢动物传播给哺乳动物的病毒;虫媒病毒;在哺乳动物和节肢动物中都能复制。由于虫媒病毒的生命周期高度依赖于节肢动物,因此通常认为控制节肢动物(媒介)对控制虫媒病毒感染很重要。在医学和兽医领域引起疾病的各种病原体被归类为虫媒病毒,其发现历史自20世纪初以来。此外,由于近年来测序技术的进步,新的虫媒病毒不断被发现。在这里,我们想概述已知的虫媒病毒及其感染。
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引用次数: 2
[Hantavirus infection as a risk for chronic kidney disease of unknown etiology (CKDu) in Sri Lanka]. [汉坦病毒感染是斯里兰卡病因不明的慢性肾脏疾病(CKDu)的风险之一]。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.175
Kumiko Yoshimatsu

Chronic kidney disease of unknown etiology (CKDu) has emerged in endemic areas of Sri Lanka since the 1990s. The disease is a chronic but fatal disease. Until now, heavy metals and agrochemicals have been suspected as the cause of CKDu, but it has been still unknown. Recently, we have found a high seroprevalence to hantavirus in CKDu patients and reported that hantavirus infection is a risk of CKDu. Hantaviruses are rodent-borne zoonotic viruses. Here, I would like to introduce a story of the research from sero-epidemiology to the search for host animals.

病因不明的慢性肾病(CKDu)自20世纪90年代以来在斯里兰卡的流行地区出现。这种病是一种慢性但致命的疾病。到目前为止,重金属和农用化学品一直被怀疑是CKDu的病因,但仍不清楚。最近,我们发现汉坦病毒在CKDu患者中有很高的血清阳性率,并报道汉坦病毒感染是CKDu的一个危险因素。汉坦病毒是啮齿动物传播的人畜共患病毒。在这里,我想介绍一个从血清流行病学到寻找宿主动物的研究故事。
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引用次数: 0
[SARS-CoV-2 genomics and its application to genome surveillance]. [SARS-CoV-2基因组学及其在基因组监测中的应用]
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.147
Makoto Kuroda
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引用次数: 0
[Hepatitis C virus research so far and in the future]. [到目前为止和未来的丙型肝炎病毒研究]。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.129
Koichi Watashi

The 2020 Nobel Prize in Physiology or Medicine was awarded to three researchers who contributed to the development of the disease concept ''non-A, non-B hepatitis'' and the isolation of its causative agent, hepatitis C virus (HCV). Technologies and experimental systems to analyze HCV have been greatly improved for these three decades, and the antiviral treatments against HCV have been developed. This review summarizes the effort to elucidate the HCV biology so far and the remaining subject to be solved in the future. I also introduce the studies to identify bioactive natural products by taking advantage of the HCV infection cell culture system.

2020年诺贝尔生理学或医学奖授予了三位研究人员,他们为“非甲、非乙型肝炎”这一疾病概念的发展以及其病原体丙型肝炎病毒(HCV)的分离做出了贡献。近三十年来,分析丙型肝炎病毒的技术和实验系统有了很大的进步,针对丙型肝炎病毒的抗病毒治疗也得到了发展。本文综述了迄今为止在阐明HCV生物学方面所做的努力和今后有待解决的问题。我还介绍了利用HCV感染细胞培养系统鉴定生物活性天然产物的研究。
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引用次数: 0
[Virus-host coevolution: Endogenous RNA viral elements as pseudogenes]. [病毒-宿主共同进化:内源性RNA病毒元件作为假基因]。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.49
Keizo Tomonaga

RNA viruses do not need to take the form of DNAs, and RNAs alone complete their replication cycles. On the other hand, since the 1970s, it has been known that DNA fragments derived from RNA viruses can be detected in RNA virus-infected cells. Furthermore, in this decade, it has become clear that the eukaryotic genomes contain genetic sequences derived from non-retroviral RNA viruses. The DNA sequences derived from these RNA viruses are thought to be generatedby using a transposable mechanism of retrotransposon, such as LINE-1. Many endogenous RNA viral sequences are formed by the same mechanism as processed pseudogenes in eukaryotic cells, but the significance of the production of RNA viral "pseudogenes " in infected cells has not been elucidated. We have discovered endogenous bornavirus-like elements (EBLs), which derived from a negative-sense, single-stranded RNA virus, Bornaviruses, and have studied the evolution and function of EBLs in host animals. The analysis of EBLs provides us a clue to unravel the history of host-RNA virus coexistence. In this review, I overview about the function of endogenous RNA virus sequences, especially EBLs in mammalian genomes, and discuss the significance of endogenization of RNA viruses as viral pseudogenes in evolution.

RNA病毒不需要采用dna的形式,RNA本身就完成了它们的复制周期。另一方面,自20世纪70年代以来,人们已经知道,从RNA病毒中提取的DNA片段可以在RNA病毒感染的细胞中检测到。此外,在这十年中,人们已经清楚地认识到真核生物基因组包含来自非逆转录病毒RNA病毒的基因序列。来自这些RNA病毒的DNA序列被认为是通过逆转录转座子的转座机制产生的,例如LINE-1。许多内源性RNA病毒序列的形成机制与真核细胞中加工的假基因相同,但在感染细胞中产生RNA病毒“假基因”的意义尚未阐明。我们发现了内源性bornavvirus -like elements (EBLs),它来源于一种负义单链RNA病毒bornavvirus,并研究了EBLs在宿主动物中的进化和功能。EBLs的分析为我们揭示宿主- rna病毒共存的历史提供了线索。本文综述了内源性RNA病毒序列,特别是EBLs在哺乳动物基因组中的功能,并讨论了RNA病毒作为病毒假基因的内源性在进化中的意义。
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引用次数: 0
[Massive nucleotide sequence data analysis reveals the nature of viruses]. [大量核苷酸序列数据分析揭示了病毒的本质]。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.45
So Nakagawa
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引用次数: 0
[Dynamic changes of cellular environment during Epstein-Barr virus productive replication]. [Epstein-Barr病毒高产复制期间细胞环境的动态变化]。
Pub Date : 2020-01-01 DOI: 10.2222/jsv.70.83
Yoshitaka Sato

Productive (lytic) replication of DNA viruses elicits host cell DNA damage responses, which cause both beneficial and detrimental effects on viral replication. Viruses utilize them and selectively cancel the 'noisy' downstream signaling pathways, leading to maintain high S-phase CDK activities required for viral replication. To achieve this fine tuning of cellular environment, herpesviruses encode many (>70) genes in their genome, which are expressed in a strictly regulated temporal cascade (immediate-early, early, and late). Here, I introduce and discuss how Epstein-Barr virus, an oncogenic herpesvirus, hijacks the cellular environment and adapt it for the progeny production.

DNA病毒的高产(裂解)复制引起宿主细胞DNA损伤反应,这对病毒复制产生有益和有害的影响。病毒利用它们并选择性地取消“嘈杂的”下游信号通路,从而维持病毒复制所需的高s期CDK活性。为了实现细胞环境的这种微调,疱疹病毒在其基因组中编码了许多(>70)个基因,这些基因在严格调控的时间级联(即早、早、晚)中表达。在这里,我介绍和讨论爱泼斯坦-巴尔病毒,一种致癌疱疹病毒,如何劫持细胞环境并使其适应后代的生产。
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