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American Journal of Medical Genetics Part B: Neuropsychiatric Genetics最新文献

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LINC00665/miR-132-5p Reduces Inflammation in Epileptic Cells by Targeting MAPK3.
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-04-04 DOI: 10.1002/ajmg.b.33027
Qi-Ming Pang, Cui Wang, Bang-Tao Li, Su-Li Zhang, Jiao-Yang Li, Shuo Gu

To investigate the role of miR-132-5p in the inflammatory response in epilepsy. Peripheral blood was collected from epileptic and healthy children, and the expression of LINC00665 and miR-132-5p was detected by q-PCR. Epilepsy cell models were constructed with microglia, transfected with miR-132-5p inhibitor and NC, and the expression of LINC00665 and miR-132-5p was detected by q-PCR, the expression of TNF-α, IL-1β, and IL-6 in the cell supernatant was detected by ELISA, and the protein levels of NLRP3 and MAPK3 were detected by WB. Finally, the targeting relationship between LINC00665 and miR-132-5p was verified by dual luciferase assay. The expression levels of both LINC00665 and miR-132-5p in the peripheral blood of children with epilepsy were significantly higher than those of healthy children. After transfection of epileptic cells with miR-132-5p inhibitor, the expression levels of LINC00665 and miR-132-5p were increased, and the expression levels of TNF-α, IL-1β, IL-6, NLRP3, and MAPK3 were decreased. Dual luciferase assay showed targeted binding of LINC00665 and miR-132-5p. LINC00665/miR-132-5p attenuates inflammatory responses in epileptic cells by targeting MAPK3.

{"title":"LINC00665/miR-132-5p Reduces Inflammation in Epileptic Cells by Targeting MAPK3.","authors":"Qi-Ming Pang, Cui Wang, Bang-Tao Li, Su-Li Zhang, Jiao-Yang Li, Shuo Gu","doi":"10.1002/ajmg.b.33027","DOIUrl":"https://doi.org/10.1002/ajmg.b.33027","url":null,"abstract":"<p><p>To investigate the role of miR-132-5p in the inflammatory response in epilepsy. Peripheral blood was collected from epileptic and healthy children, and the expression of LINC00665 and miR-132-5p was detected by q-PCR. Epilepsy cell models were constructed with microglia, transfected with miR-132-5p inhibitor and NC, and the expression of LINC00665 and miR-132-5p was detected by q-PCR, the expression of TNF-α, IL-1β, and IL-6 in the cell supernatant was detected by ELISA, and the protein levels of NLRP3 and MAPK3 were detected by WB. Finally, the targeting relationship between LINC00665 and miR-132-5p was verified by dual luciferase assay. The expression levels of both LINC00665 and miR-132-5p in the peripheral blood of children with epilepsy were significantly higher than those of healthy children. After transfection of epileptic cells with miR-132-5p inhibitor, the expression levels of LINC00665 and miR-132-5p were increased, and the expression levels of TNF-α, IL-1β, IL-6, NLRP3, and MAPK3 were decreased. Dual luciferase assay showed targeted binding of LINC00665 and miR-132-5p. LINC00665/miR-132-5p attenuates inflammatory responses in epileptic cells by targeting MAPK3.</p>","PeriodicalId":7673,"journal":{"name":"American Journal of Medical Genetics Part B: Neuropsychiatric Genetics","volume":" ","pages":"e33027"},"PeriodicalIF":1.6,"publicationDate":"2025-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143778749","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Phenotypic Manifestations of a New Variant in HDAC4 Gene.
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-04-01 DOI: 10.1002/ajmg.b.33029
Monica Ianniello, Valentina De Angelis, Alessandro Ottaiano, Raffella Ruggiero, Roberto Sirica, Nadia Petrillo, Antonio Fico, Tania Cerbone, Cecilia Rosania, Raffaella Mormile, Carmine Picone, Mariachiara Santorsola, Giovanni Savarese

Psychomotor development delays affect 1%-3% of children and encompass a wide range of motor, cognitive, and social impairments. The histone deacetylase 4 (HDAC4) gene, critical for neurodevelopmental pathways, has been associated with developmental delays, autism spectrum disorders, and cognitive impairments. Here, we report a case of a female patient with global psychomotor developmental delay, hypotonia, and feeding difficulties since infancy. By the age of seven, she developed epilepsy, later diagnosed as Lennox-Gastaut syndrome. Brain magnetic resonance imaging revealed reduced white matter and polymicrogyria-like cortical malformations, primarily in the fronto-basal regions. Whole-exome sequencing identified a novel de novo HDAC4 mutation (p.Gln1046AspfsTer29; c.3136_3137delCA), resulting in a frameshift and a premature stop codon. Additional phenotypic features included distinct craniofacial abnormalities and hypertrichosis. This report highlights the critical role of HDAC4 in psychomotor development and cognitive function, expands the phenotypic spectrum associated with HDAC4 mutations, and suggests a potential link to epilepsy and cortical malformations.

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引用次数: 0
A Transcriptome-Wide Mendelian Randomization Study in Isolated Human Immune Cells Highlights Risk Genes Involved in Viral Infections and Potential Drug Repurposing Opportunities for Schizophrenia. 对分离的人类免疫细胞进行的全转录组孟德尔随机化研究揭示了涉及病毒感染的风险基因和治疗精神分裂症的潜在药物再利用机会。
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-03-24 DOI: 10.1002/ajmg.b.33028
David Stacey, Liam Gaziano, Preethi Eldi, Catherine Toben, Beben Benyamin, S Hong Lee, Elina Hyppönen

Schizophrenia is a neurodevelopmental psychiatric disorder characterized by symptoms of psychosis, thought disorder, and flattened affect. Immune mechanisms are associated with schizophrenia, though the precise nature of this relationship (causal, correlated, consequential) and the mechanisms involved are not fully understood. To elucidate these mechanisms, we conducted a transcriptome-wide Mendelian randomization study using gene expression exposures from 29 human cis-eQTL data sets encompassing 11 unique immune cell types, available from the eQTL catalog. These analyses highlighted 196 genes, including 67 located within the human leukocyte antigen (HLA) region. Enrichment analyses indicated an overrepresentation of immune genes, which was driven by the HLA genes. Stringent validation and replication steps retained 61 candidate genes, 27 of which were the sole causal signals at their respective loci, thereby representing strong candidate effector genes at known risk loci. We highlighted L3HYPDH as a potential novel schizophrenia risk gene and DPYD and MAPK3 as candidate drug repurposing targets. Furthermore, we performed follow-up analyses focused on one of the candidate effectors, interferon regulatory transcription factor 3 (IRF3), which coordinates interferon responses to viral infections. We found evidence of shared genetic etiology between schizophrenia and autoimmune diseases at the IRF3 locus, and a significant enrichment of IRF3 chromatin binding at known schizophrenia risk loci. Our findings highlight a novel schizophrenia risk gene, potential drug repurposing opportunities, and provide support for IRF3 as a schizophrenia hub gene, which may play critical roles in mediating schizophrenia-autoimmune comorbidities and the impact of infections on schizophrenia risk.

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引用次数: 0
Association Between Polygenic Risk and Symptom Severity Change After Cognitive Behavioral Therapy for Obsessive-Compulsive Disorder.
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-03-07 DOI: 10.1002/ajmg.b.33026
Julia Bäckman, John Wallert, Matthew Halvorsen, Bjorn Roelstraete, Elles de Schipper, Nora I Strom, Thorstein Olsen Eide, Kira D Höffler, Manuel Mattheisen, Bjarne Hansen, Gerd Kvale, Kristen Hagen, Jan Haavik, David Mataix-Cols, Christian Rück, James J Crowley

A large proportion of patients undergoing cognitive behavior therapy (CBT) for obsessive-compulsive disorder (OCD) do not respond sufficiently to treatment. Identifying predictors for change in symptom severity after treatment could inform clinical decision-making, allow for better-tailored interventions, and avoid treatment failure. Prior research on predictors for treatment response has, however, yielded inconsistent findings with limited clinical utility. Here, we investigated the predictive power of nine polygenic risk scores (PRSs) for psychiatric and cognitive traits in 1598 OCD patients (1167 adults and 431 children/adolescents) treated with CBT in Sweden and Norway. We fitted linear mixed models adjusted for age, sex, genotyping batch, and the first five ancestry PCs to estimate associations between PRS and symptom severity change from pre- to post-treatment. The PRS for schizophrenia showed a modestly significant association with symptom change (β = 0.013, p = 0.04, R2 = 0.10), indicating that a higher PRS for schizophrenia was associated with a smaller decrease in symptom severity. No other PRS were significantly associated with the outcome. While these results await replication and expansion, current PRS for psychiatric and cognitive phenotypes do not seem to contribute meaningfully to symptom severity change in CBT for OCD.

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引用次数: 0
Correction to "Disentangling Differing Relationships Between Internalizing Disorders and Alcohol Use".
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-02-07 DOI: 10.1002/ajmg.b.33025
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引用次数: 0
Pharmacogenetic Testing for Predicting Methylphenidate Treatment Outcomes in Childhood Attention Deficit Hyperactivity Disorder in Turkey: Focus on Carboxylesterase 1, Latrophilin-3, and Catechol-O-Methyltransferase.
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-01-27 DOI: 10.1002/ajmg.b.33024
Ipek Suzer Gamli, Anne Van Veggel, Rabia Sevcan Karaaslan, Ajla Hodzic Kuerec, Zeina Marzoukah, Ibrahim Adak, Gulay Bulut, Huseyin Tunc, Candan Perry Hizel, Cuneyd Parlayan, Ozalp Ekinci, Ron Van Schaik, Demet Akin

Pharmacogenetic studies involving Carboxylesterase 1 (CES1), Latrophilin-3 (LPHN3), and Catechol-O-methyltransferase (COMT) revealed individual differences regarding therapeutic response in children with attention deficit hyperactivity disorder (ADHD) under methylphenidate (MPH) treatment. This study aimed to evaluate MPH's association with the adverse effect status in children and its relationship with CES1, LPHN3, and COMT in the Turkish population. The study included 102 children and adolescents with ADHD, who were categorized as responders, or the adverse effect group based on their treatment response. The Naranjo Adverse Drug Reaction Probability Scale evaluated the presence and severity of adverse effects. Saliva sample was taken from the patients and genotype distribution of CES1 rs3815583, CES1 rs2307227, LPHN3 rs6551665, LPHN3 rs1947274, LPHN3 rs6858066, LPHN3 rs2345039, and COMT rs4680 were examined. In the adverse effect group, instances of carrying the GG genotype in CES1 rs2307227, having G vs. T genotype and GG vs. GT were significantly higher. In LPHN3 rs2345039, carrying the C genotype vs. G was associated with a serious adverse effect. In COMT rs4680, individuals with the AA or GG genotype were significantly higher in the adverse effect group. Our study suggests a relationship between genetic polymorphisms and the side effect status in children receiving MPH.

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引用次数: 0
RYR3 Variants Are Potentially Associated With Idiopathic (Non-Lesional) Partial Epilepsy/Susceptibility of Seizures, Toward Understanding the Gene-Disease Association by Genetic Dependent Nature. RYR3变异可能与特发性(非病变性)部分癫痫/癫痫易感性相关,通过遗传依赖性来理解基因与疾病的关联。
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-01-22 DOI: 10.1002/ajmg.b.33023
Yang Tian, Yun-Qi Hou, Qiong-Xiang Zhai, Xing-Wang Song, Bing-Mei Li, Jie Wang, Jing-Jing Ji, Yin-Ting Liao, Wen-Xiong Chen, Bin Li, Wei-Ping Liao

The RYR3 gene encodes a brain-type ryanodine receptor that functions to release calcium from intracellular storage and plays an essential role in calcium signaling. The associations between RYR3 variants and brain disorders remain unknown. We performed whole-exome sequencing in patients with idiopathic (non-lesional) partial epilepsy of unknown etiology. One de novo missense and six biallelic missense RYR3 variants were identified in seven unrelated cases. These variants had no or extremely low allele frequencies in the general population and were predicted to alter hydrogen bonds/decrease protein stability. Patients presented with partial seizures or secondarily generalized tonic-clonic seizures. All patients were seizure-free with/without anti-seizure treatment. Four showed antecedent febrile seizures, a typical susceptibility disorder that is related to the precipitating factor of fever. The genetic dependence nature (GDN) of RYR3, which is defined as the distinct impact of the absence of a gene on normal life, is "obligatory" (causing disease phenotypes). Complete abolishing of RYR3 results in abnormal phenotypes instead of lethality, whereas partial/mild impairment (usually more common) is associated with mild disease or increased susceptibility to disease, consistent with our findings. RYR3 is therefore potentially a candidate disease gene or susceptibility gene for idiopathic partial epilepsy.

RYR3基因编码一种脑型ryanodine受体,其功能是从细胞内储存释放钙,并在钙信号传导中起重要作用。RYR3变异与脑部疾病之间的关联尚不清楚。我们对病因不明的特发性(非病变性)部分癫痫患者进行了全外显子组测序。在7个不相关的病例中发现了1个新生错义和6个双等位错义RYR3变异。这些变异在一般人群中没有或极低的等位基因频率,预计会改变氢键/降低蛋白质稳定性。患者表现为部分性发作或继发全身性强直阵挛性发作。所有患者经抗癫痫治疗后均无癫痫发作。4例患儿表现出先期发热性惊厥,这是一种典型的与发热诱发因素有关的易感性障碍。RYR3的遗传依赖性(GDN)被定义为基因缺失对正常生活的明显影响,是“强制性的”(引起疾病表型)。RYR3的完全消除导致表型异常而不是致命性,而部分/轻度损伤(通常更常见)与轻度疾病或对疾病的易感性增加有关,这与我们的研究结果一致。因此,RYR3可能是特发性部分性癫痫的候选疾病基因或易感基因。
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引用次数: 0
Internalizing Psychiatric Symptoms in People With Mosaicism for Trisomy 21. 21三体嵌合体患者的内化精神症状
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-01-16 DOI: 10.1002/ajmg.b.33022
Ruth C Brown, Allison D'Aguilar, Quinn Hurshman, Rebekah NailorZee, Timothy P York, George Capone, Ananda B Amstadter, Colleen Jackson-Cook

People with mosaicism for trisomy 21 have been shown to exhibit many of the same phenotypic traits present in people with non-mosaic Down syndrome, but with varying symptom severity. However, the behavioral phenotype of people with mosaic Down syndrome (mDS) has not been well characterized. This study aimed to examine the prevalence of self-report and caregiver-report symptoms of depression and anxiety among a sample of 62 participants with mDS aged 12-46 and assess their association with the percentage of trisomy 21 in blood and/or buccal mucosa cells. The overall MANCOVA revealed a significant effect of trisomy on the set of internalizing scales, controlling for age and gender (p = 0.038, partial eta2 = 0.22). However, follow-up univariate analyses showed that the initial significant effect of trisomy on fear (p = 0.049, partial eta2 = 0.08) did not survive correction for multiple comparisons (adjusted p = 0.300). No other effects were significant. This study highlights the high occurrence of depression and anxiety symptoms in individuals with mDS and the need for routine assessment to optimize their care. It also demonstrates the ability of people with mDS to complete these evaluations, thereby supporting their inclusion in research studies/clinical trials.

21三体嵌合体患者表现出许多与非嵌合体唐氏综合征患者相同的表型特征,但症状严重程度不同。然而,马赛克唐氏综合征(mDS)患者的行为表型尚未得到很好的表征。本研究旨在检查62名年龄在12-46岁的mDS患者中自我报告和护理者报告的抑郁和焦虑症状的患病率,并评估其与血液和/或颊粘膜细胞中21三体百分比的关系。总体MANCOVA显示三体对内化量表集有显著影响,控制了年龄和性别(p = 0.038,部分eta2 = 0.22)。然而,随访的单变量分析显示,三体对恐惧的初始显著影响(p = 0.049,部分eta2 = 0.08)在多重比较校正后没有存在(调整后p = 0.300)。没有其他显著的影响。本研究强调了mDS患者抑郁和焦虑症状的高发生率,以及对其进行常规评估以优化护理的必要性。它还证明了医学博士有能力完成这些评估,从而支持将他们纳入研究/临床试验。
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引用次数: 0
Appraising the Effects of Gut Microbiota on Insomnia Risk Through Genetic Causal Analysis. 通过遗传原因分析评估肠道菌群对失眠风险的影响。
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-01-03 DOI: 10.1002/ajmg.b.33021
Peihong Li, Song Wang, Jiaxin Li, Zheng Xiao, Haoyue Zhu, Dandan Sheng, Weiping Liu, Bo Xiao, Luo Zhou

BackgroundInsomnia is a common neurological disorder that exhibits connections with the gut microbiota; however, the exact causal relationship remains unclear. MethodsWe conducted a Mendelian randomization (MR) study to systematically evaluate the causal effects of genus-level gut microbiota on insomnia risk in individuals of European ancestry. Summary-level datasets on gut microbiota were sourced from the genome-wide association study (GWAS) of MiBioGen, while datasets on insomnia were obtained from the GWAS of Neale Lab and FinnGen. The primary analytical approach used was the inverse-variance weighted (IVW) method, supplemented by MR-Egger, maximum likelihood, MR-robust adjusted profile score, and weighted median. Sensitivity analyses were conducted to ensure robustness. ResultsThe microbial taxa Enterorhabdus, Family XIII AD3011 group, Paraprevotella, and Lachnospiraceae UCG004 were associated with an increased risk of insomnia, whereas Coprococcus1, Coprobacter, Desulfovibrio, Flavonifractor, Olsenella, Odoribacter, and Oscillibacter were linked to a decreased risk. Regarding the insomnia phenotype characterized by trouble falling asleep, the microbial taxon Eisenbergiella was correlated with an increased risk, while Haemophilus and the Eubacterium brachy group were associated with a reduced risk. Furthermore, for the insomnia phenotype characterized by waking too early, the microbial taxa Family XIII UCG001, Lachnospiraceae FCS020 group, and Olsenella were linked to an increased risk, whereas the Eubacterium brachy group and Victivallis were associated with a lower risk. The results remained robust across all sensitivity analyses. ConclusionOur MR study identified multiple genus-level gut microbial taxa that may exhibit potential causal effects on insomnia from a genetic perspective. These findings provide evidence supporting the theory of the microbiota-gut-brain axis and offer new insights into potential prevention and therapeutic targets for insomnia.

背景:失眠是一种常见的神经系统疾病,与肠道微生物群有关;然而,确切的因果关系尚不清楚。方法采用孟德尔随机化(MR)研究,系统评估欧洲血统个体肠道微生物群与失眠风险的因果关系。肠道微生物群的汇总数据集来自MiBioGen的全基因组关联研究(GWAS),而失眠的数据集来自Neale Lab和FinnGen的全基因组关联研究(GWAS)。使用的主要分析方法是反方差加权(IVW)方法,辅以MR-Egger、最大似然、mr -鲁棒性调整剖面评分和加权中位数。进行敏感性分析以确保稳健性。结果肠道菌群、XIII家族AD3011组、Paraprevotella和毛螺科UCG004与失眠风险增加相关,而Coprococcus1、Coprobacter、Desulfovibrio、黄酮因子、Olsenella、Odoribacter和Oscillibacter与失眠风险降低相关。对于以难以入睡为特征的失眠表型,微生物分类群Eisenbergiella与风险增加相关,而Haemophilus和Eubacterium brachy组与风险降低相关。此外,对于以过早醒来为特征的失眠表型,微生物分类群Family XIII UCG001, Lachnospiraceae FCS020组和Olsenella组与风险增加有关,而Eubacterium brachy组和Victivallis组与风险较低相关。在所有敏感性分析中,结果仍然是稳健的。结论我们的MR研究发现了多属水平的肠道微生物群,从遗传学角度来看,这些微生物群可能对失眠有潜在的因果影响。这些发现为支持微生物-肠道-脑轴理论提供了证据,并为失眠的潜在预防和治疗靶点提供了新的见解。
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引用次数: 0
Identification of Transdiagnostic Childhood Externalizing Pathology Within an Electronic Medical Records Database and Application to the Analysis of Rare Copy Number Variation. 电子病历数据库中儿童外化病理的鉴别及罕见拷贝数变异分析的应用。
IF 1.6 3区 医学 Q3 GENETICS & HEREDITY Pub Date : 2025-01-02 DOI: 10.1002/ajmg.b.33020
India A Reddy, Lide Han, Sandra Sanchez-Roige, Maria Niarchou, Douglas M Ruderfer, Lea K Davis

Externalizing traits and behaviors are broadly defined by impairments in self-regulation and impulse control that typically begin in childhood and adolescence. Externalizing behaviors, traits, and symptoms span a range of traditional psychiatric diagnostic categories. In this study, we sought to generate an algorithm that could reliably identify transdiagnostic childhood-onset externalizing cases and controls within a university hospital electronic health record (EHR) database. Within the Vanderbilt University Medical Center (VUMC) EHR, our algorithm identified cases with a clinician-validated positive predictive value of 90% and controls with a negative predictive value of 88%. In individuals of genetically defined European ancestry (CEU-clustered; Ncase = 487, Ncontrol = 5638), case status was significantly associated with psychiatric comorbidity and with elevated externalizing polygenic scores (OR: 1.20; 95% CI: 1.09-1.33; p = 1.14 × 10-3; based on published genome-wide association data). To test whether our cohort definitions could be applied to generate novel genetic insights, we examined rare (allele frequency < 0.5%) copy number variation. An association (OR: 9.70; CI: 3.24-29.0) was identified in the CEU-clustered cohort on chromosome 2 (chr2: 45,408,678-45,551,530; duplication), although the statistical strength of this association was modest (p = 0.052). We also examined the role of an externalizing burden score based on the number of externalizing diagnoses present in cases and found similar results to our case-control analysis. This analysis identified several other statistically significant CNV region associations. This study provides a framework for identifying childhood externalizing case-control cohorts within an EHR. Future work should validate this framework within other health systems. A broadly applicable algorithm, like this one, may allow for detection of rare outcomes or outcomes in populations historically excluded from genomic research through meta-analysis of data across health care systems.

外化特征和行为被广泛定义为自我调节和冲动控制的障碍,通常始于童年和青春期。外化行为、特征和症状跨越了一系列传统的精神病学诊断类别。在这项研究中,我们试图生成一种算法,可以可靠地识别大学医院电子健康记录(EHR)数据库中的跨诊断儿童期发病外化病例和对照。在范德比尔特大学医学中心(VUMC)的电子病历中,我们的算法识别出临床验证的阳性预测值为90%的病例,而阴性预测值为88%的对照组。在遗传上确定的欧洲血统的个体中(ceu聚集;Ncase = 487, Ncontrol = 5638),病例状态与精神合并症和外化多基因评分升高显著相关(OR: 1.20;95% ci: 1.09-1.33;p = 1.14 × 10-3;基于已发表的全基因组关联数据)。为了测试我们的队列定义是否可以应用于产生新的遗传见解,我们检查了罕见(等位基因频率)
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引用次数: 0
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American Journal of Medical Genetics Part B: Neuropsychiatric Genetics
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