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MYB4 is the best candidate transcription factor involved in pinosylvin stilbene biosynthesis in Pinus strobus L. cells by fungal elicitor treatment MYB4 是真菌诱导剂处理松柏细胞时参与松脂松素二苯乙烯生物合成的最佳候选转录因子
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-05-07 DOI: 10.1186/s13595-024-01234-x
Yi Rae Kim, Young Bum Moon, Han Bin Choi, Jung Yeon Han, Han Suk Choi, Sangrea Shim, Yong Eui Choi

Key message

Dihydropinosylvin monomethyl ether (DPME) and pinosylvin monomethyl ether (PME) are pinosylvin derivatives that show high nematicidal activity against pine wood nematodes (PWNs). Here, we found that fungal elicitor treatment boosted the production of DPME and PME in cultured Pinus strobus L. cells and investigated the transcription factors (TFs) regulating the genes in the pinosylvin stilbenoid biosynthesis pathway.

Context

The discovery of TFs involved in the synthesis of DPME and PME provides an important clue to understanding the pinosylvin stilbenoid synthesis in pine plants.

Aims

We investigated the best fungal elicitor for the production of DPME and PME and the transcriptional activities of genes involved in PME and DPME biosynthesis in P. strobus L. cells after fungal elicitor treatment.

Methods

The content of DPME and PME in P. strobus cells was examined after treatment with fungal elicitors prepared from seven different species of fungi. Moreover, the role of fungal elicitors in the transcriptional activity of genes involved in DPME and PME biosynthesis was investigated by transcriptome analysis using RNA sequencing.

Results

Penicillium chrysogenum Thorn was the most efficient fungal elicitor for the production of DPME and PME in P. strobus cells among the other fungal species. The accumulation of DPME and PME in P. strobus cells after P. chrysogenum elicitor treatment increased 12.7-fold and 23.7-fold, respectively, compared to the control. Transcriptome analysis revealed that fungal elicitor treatment resulted in enhanced transcription of the PAL, 4CL, STS, PMT, and ACC genes, which are involved in PME and DPME biosynthesis. Some transcription factors belonging to the bHLH, MYB, WRKY, and ERF families showed a high transcription rate after fungal elicitor treatment.

Conclusions

We found that the fungal elicitor is a strong inducer of the accumulation of pinosylvin derivatives in the cells of P. strobus. We selected one unigene (c133966_g3_i1 in the MYB family) as the best candidate TF that regulates the DPME and PME biosynthesis in P. strobus by transcriptome analysis.

关键信息二氢丙基松香素单甲醚(DPME)和松香素单甲醚(PME)是松香素衍生物,对松材线虫(PWNs)具有很高的杀线虫活性。背景发现参与 DPME 和 PME 合成的 TFs 为了解松科植物松脂松素类化合物的合成提供了重要线索。目的我们研究了产生 DPME 和 PME 的最佳真菌诱导剂,以及真菌诱导剂处理后松树细胞中参与 PME 和 DPME 生物合成的基因的转录活动。方法用 7 种不同真菌制备的真菌诱导剂处理松树细胞后,检测了细胞中 DPME 和 PME 的含量。此外,通过使用 RNA 测序进行转录组分析,研究了真菌激发剂在参与 DPME 和 PME 生物合成的基因转录活性中的作用。与对照组相比,蛹虫草真菌诱导剂处理后石蒜细胞中 DPME 和 PME 的积累量分别增加了 12.7 倍和 23.7 倍。转录组分析表明,真菌诱导剂处理导致参与 PME 和 DPME 生物合成的 PAL、4CL、STS、PMT 和 ACC 基因转录增强。一些属于 bHLH、MYB、WRKY 和 ERF 家族的转录因子在真菌诱导剂处理后显示出较高的转录率。通过转录组分析,我们选择了一个单基因(MYB 家族中的 c133966_g3_i1)作为调控石蒜 DPME 和 PME 生物合成的最佳候选 TF。
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引用次数: 0
Aggregated database of forest soil chemical properties in the Czech Republic based on surveys from 2000 to 2020 基于 2000 年至 2020 年调查的捷克共和国森林土壤化学特性汇总数据库
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-04-17 DOI: 10.1186/s13595-024-01225-y
Kateřina Neudertová Hellebrandová, Věra Fadrhonsová, Vít Šrámek

Key message

The dataset includes data from forest soil surveys conducted in the period 2000–2020. It provides soil and site variables from 8269 locations. Data are aggregated in three basic soil layers: upper organic soil horizon (FH, 6875 locations), upper mineral layer 0–30 cm (M03, 8051 locations) and deeper mineral soil layer 30–80 cm (M38, 2260 locations).

The dataset is available at https://doi.org/10.5281/zenodo.10608814, and access to the metadata is at https://metadata-afs.nancy.inra.fr/geonetwork/srv/fre/catalog.search#/metadata/38f24573-3c0d-469a-a66a-7060ce082155.

关键信息该数据集包括 2000-2020 年期间开展的森林土壤调查数据。它提供了 8269 个地点的土壤和地点变量。数据按三个基本土壤层汇总:上层有机土壤层(FH,6875 个地点)、0-30 厘米上层矿质土壤层(M03,8051 个地点)和 30-80 厘米深层矿质土壤层(M38,2260 个地点)。数据集可在 https://doi.org/10.5281/zenodo.10608814 上获取,元数据可在 https://metadata-afs.nancy.inra.fr/geonetwork/srv/fre/catalog.search#/metadata/38f24573-3c0d-469a-a66a-7060ce082155 上获取。
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引用次数: 0
Improving monitoring and management methods is of the utmost importance in countries at risk of invasion by the pinewood nematode 在面临松材线虫入侵风险的国家,改进监测和管理方法至关重要
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-03-27 DOI: 10.1186/s13595-024-01233-y
Christelle Robinet, Annie Raffin, Hervé Jactel, Emmanuel Kersaudy, Philippe Deuffic, Armand Clopeau, Hoël Hotte, Marc Kleinhentz, Cécile Robin, Géraldine Roux, Laure Villate, Philippe Castagnone-Sereno

Key message

The invasive pine wood nematode is a major threat to pine forests worldwide, causing extensive tree mortality. Although scientific knowledge and control measures are continuously improving, important gaps remain. We argue that some key questions, notably related to early detection and pest management, need to be urgently tackled in countries at risk of invasion such as France.

关键信息外来入侵的松材线虫是全球松林的主要威胁,会造成树木大面积死亡。尽管科学知识和控制措施在不断改进,但仍然存在重大差距。我们认为,一些关键问题,特别是与早期检测和害虫管理有关的问题,需要在法国等面临入侵风险的国家紧急解决。
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引用次数: 0
Dynamic height growth models for highly productive pedunculate oak (Quercus robur L.) stands: explicit mapping of site index classification in Serbia 高产截干栎(Quercus robur L.)林分的动态高度增长模型:塞尔维亚场地指数分类的明确制图
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-03-26 DOI: 10.1186/s13595-024-01231-0
Marko Kazimirović, Branko Stajić, Nenad Petrović, Janko Ljubičić, Olivera Košanin, Marc Hanewinkel, Dominik Sperlich
<h3 data-test="abstract-sub-heading">Key message</h3><p>We applied the generalized algebraic difference approach (GADA) to develop dynamic models of height growth for pedunculate oak (<i>Quercus robur</i> L.) in Serbia. According to the dominant heights, the studied region comprises some of Europe’s most productive sites for pedunculate oak. Therein, we have generated a map showing the current site index class of stands. Such a map could be used to enhance forest management and evaluate climate change impacts.</p><h3 data-test="abstract-sub-heading">Context</h3><p>Although sustainable forest management requires reliable prediction of forest site productivity, such indicators are currently unavailable for pedunculate oak sites in Serbia. The site index (SI) curves represent the most commonly used indirect scale for site productivity classification. The dynamic equations derived by the Generalized Algebraic Difference Approach (GADA) are the state-of-the-art approach in growth modeling, but they have not been widely applied for studying the height dynamics of pedunculate oak.</p><h3 data-test="abstract-sub-heading">Aims</h3><p>The main objectives of this study were to develop the first dynamic site index curves for pedunculate oak in Serbia and subsequently to provide stand-level maps with predicted site indices.</p><h3 data-test="abstract-sub-heading">Methods</h3><p>We have tested five flexible polymorphic equations with variable asymptotes derived by the GADA approach. Models were calibrated using artificially established growth trajectories obtained from 3636 detailed temporary sample plots. The selection of the most suitable model was accomplished according to (1) quantitative measures of goodness of fit, (2) the analysis of residual scattering, and (3) the biological plausibility of obtained height growth curves.</p><h3 data-test="abstract-sub-heading">Results</h3><p>After correcting the error terms with a continuous first-order autoregressive structure and conducting a three-stage performance analysis, the GADA dynamic site index model derived from the Hossfeld base equation shows the best overall properties. Insight into the oscillations of relative error suggested that 100 years is the most suitable age for site index referencing. Comparison with existing height growth models revealed greater flexibility and a considerably better representation of the height growth dynamic of pedunculate oak in the studied region. Additionally, we have produced a spatially explicit map showing the expected SI<sub>100</sub> for 1907 stands with pedunculate oak within 22 management units.</p><h3 data-test="abstract-sub-heading">Conclusion</h3><p>Dynamic SI-curves based on GADA will serve forest practitioners to update management plans and serve as a reference point for benchmarking the impact of climate change and for developing adaptation strategies. The utilized approach allowed unbiased estimation of SI<sub>100</sub> across all age classes so that the resu
关键信息我们应用广义代数差分法(GADA)建立了塞尔维亚截干栎(Quercus robur L.)高度增长的动态模型。根据主要高度,所研究的地区是欧洲栎树产量最高的地区之一。在此基础上,我们绘制了一张地图,显示了当前林分的地点指数等级。虽然可持续森林管理需要可靠的林地生产力预测,但塞尔维亚的截干栎林地目前还没有此类指标。林地指数(SI)曲线是林地生产力分类中最常用的间接尺度。由广义代数差分法(GADA)推导出的动态方程是最先进的生长建模方法,但尚未被广泛应用于研究截干栎的高度动态。利用从 3636 块详细的临时样地中获得的人工建立的生长轨迹对模型进行了校准。结果用连续的一阶自回归结构校正误差项并进行三阶段性能分析后,由霍斯菲尔德基本方程推导出的 GADA 动态场地指数模型显示出最佳的整体特性。对相对误差振荡的洞察表明,100 年是最合适的场地指数参考年限。与现有的高度增长模型进行比较后发现,该模型具有更大的灵活性,能更好地反映研究区域内有梗橡树的高度增长动态。此外,我们还绘制了一张明确的空间地图,显示了 22 个管理单元内 1907 个有梗栎林分的预期 SI100。采用这种方法可以对所有龄级的 SI100 进行无偏估计,从而可以在更大范围内对结果进行映射。这项研究是欧洲对有梗橡树动态模型的第二次应用,也是首次在该物种分布范围内一些最富饶的地点进行应用。
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引用次数: 0
Oak leaf morphology may be more strongly shaped by climate than by phylogeny 橡树叶的形态受气候的影响可能比受系统发育的影响更大
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-03-18 DOI: 10.1186/s13595-024-01232-z

Abstract

Key message

Despite been grown under the same climate, oak species are able to correlate with looser, but still identifiable, leaf morphological syndromes, composed by morphological traits with an ecological role in their respective macroclimates.

Context

Environmental restrictions imposed by climate have been shown to modulate leaf morphology. A reduction of leaf area in hot and dry climates reduces overheating because of a thinner boundary layer. Lobed shapes enhance hydraulic conductivity and faster cooling. Elongated leaves drain more quickly under high precipitation. Trichomes may help to reduce the effects of excessive sun exposure in hot and dry environments. Leaf mass per area (LMA) increases in stressful environments.

Aim

To assess the influence of global climate and clade on oak leaf syndromes comprising morphological traits with ecological roles.

Methods

We analyzed seven morphological traits in 141 oak species grown in a botanical garden, characterized into five macroclimates, and explored the partial effects of clade and climate.

Results

We found significant associations between macroclimate and every morphological trait measured. Temperate species tend to have large, obovate, lobed, malacophyllous leaves. Species occurring in dry habitats usually present small, rounded, pubescent, sclerophyllous leaves. Warm and wet climates induce the development of slender, lanceolate, glabrous leaves with an acuminate apex.

Conclusion

The functional roles of the different morphological traits are partially confirmed in genus Quercus as a response to the different macroclimates, where different leaf syndromes can be distinguished.

摘要 关键信息 尽管生长在相同的气候条件下,栎类物种的叶片形态综合征仍然可以识别,但却比较松散,这些综合征由在各自的宏观气候条件下具有生态作用的形态特征组成。 背景 气候造成的环境限制已被证明可以调节叶片形态。在炎热干燥的气候条件下,减少叶片面积可以减少过热,因为边界层变薄了。叶片形状能增强水的传导性,加快冷却。在降水量大的情况下,拉长的叶片排水更快。毛状体可能有助于减少炎热和干燥环境中过度日晒的影响。在压力环境下,单位面积叶片质量(LMA)会增加。 目的 评估全球气候和支系对栎树叶片综合征的影响,包括具有生态作用的形态特征。 方法 我们分析了植物园中生长的 141 种栎树的 7 个形态特征,将其划分为 5 个宏观气候区,并探讨了支系和气候的部分影响。 结果 我们发现宏观气候与所测量的每个形态特征之间都有明显的关联。温带物种的叶片往往较大、倒卵形、浅裂、具叶绿素。生长在干旱地区的物种通常长着圆形、短柔毛、硬叶的小叶子。在温暖潮湿的气候条件下,叶片细长,披针形,无毛,先端渐尖。 结论 不同形态特征的功能作用在柞树属中得到了部分证实,它们是对不同宏观气候的反应,可以区分出不同的叶片综合征。
{"title":"Oak leaf morphology may be more strongly shaped by climate than by phylogeny","authors":"","doi":"10.1186/s13595-024-01232-z","DOIUrl":"https://doi.org/10.1186/s13595-024-01232-z","url":null,"abstract":"<h3>Abstract</h3> <span> <h3>Key message</h3> <p>Despite been grown under the same climate, oak species are able to correlate with looser, but still identifiable, leaf morphological syndromes, composed by morphological traits with an ecological role in their respective macroclimates.</p> </span> <span> <h3>Context</h3> <p>Environmental restrictions imposed by climate have been shown to modulate leaf morphology. A reduction of leaf area in hot and dry climates reduces overheating because of a thinner boundary layer. Lobed shapes enhance hydraulic conductivity and faster cooling. Elongated leaves drain more quickly under high precipitation. Trichomes may help to reduce the effects of excessive sun exposure in hot and dry environments. Leaf mass per area (LMA) increases in stressful environments.</p> </span> <span> <h3>Aim</h3> <p>To assess the influence of global climate and clade on oak leaf syndromes comprising morphological traits with ecological roles.</p> </span> <span> <h3>Methods</h3> <p>We analyzed seven morphological traits in 141 oak species grown in a botanical garden, characterized into five macroclimates, and explored the partial effects of clade and climate.</p> </span> <span> <h3>Results</h3> <p>We found significant associations between macroclimate and every morphological trait measured. Temperate species tend to have large, obovate, lobed, malacophyllous leaves. Species occurring in dry habitats usually present small, rounded, pubescent, sclerophyllous leaves. Warm and wet climates induce the development of slender, lanceolate, glabrous leaves with an acuminate apex.</p> </span> <span> <h3>Conclusion</h3> <p>The functional roles of the different morphological traits are partially confirmed in genus <em>Quercus</em> as a response to the different macroclimates, where different leaf syndromes can be distinguished.</p> </span>","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"25 1","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140151601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Elevation affects both the occurrence of ungulate browsing and its effect on tree seedling growth for four major tree species in European mountain forests 海拔高度既影响欧洲山地森林中四种主要树种遭受豺狼啃食的情况,也影响豺狼啃食对树苗生长的影响
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-03-12 DOI: 10.1186/s13595-024-01226-x
Marianne Bernard, Julien Barrere, Xavier Morin, Sonia Saïd, Vincent Boulanger, Elena Granda, Raquel Benavides, Hervé Jactel, Marco Heurich, Sonia G. Rabasa, Fernando Valladares, Georges Kunstler

Key message

In European mountain forests, the growth of silver fir (Abies alba Mill.), sycamore maple (Acer pseudoplatanus L.), European beech (Fagus sylvatica L.) and Norway spruce (Picea abies (L.) H. Karst.) seedlings is more strongly affected by ungulate browsing than by elevation. But, the constraint exerted by ungulates, in particular the probability for seedlings to be browsed, increases with elevation for most species.

Context

While concerns about mountain forest regeneration rise due to their high vulnerability to climate change, the increase in wild ungulate populations and the expansion of their range in the last decades exert an additional constraint on the survival and growth of young trees. Understanding how this constraint can vary with elevation is thus a key to assess the consequences of this population increase for the regeneration of mountain forests.

Aims

In this study, we investigate the effect of elevation on (i) the occurrence of browsing for seedlings and on (ii) the reduction in seedling growth induced by ungulate browsing.

Methods

We monitored height growth and browsing occurrence on silver fir, sycamore maple, European beech and Norway spruce seedlings across seven elevation gradients (from 400 to 2013 m) located from France to northern Sweden.

Results

Seedlings of the two most palatable species—fir and maple—were more likely to be browsed at high elevation while the opposite effect was observed for spruce. Browsing strongly reduced seedling growth for all species but Norway spruce, while elevation had no direct effect on seedling growth. This browsing-induced growth reduction was stronger at high elevation for fir seedlings.

Conclusions

Browsing is overall a stronger constraint on seedling growth than elevation for four dominant species of European mountain forests. Elevation can, however, affect both browsing probability and the effect of browsing on seedling growth. Our results highlight the importance of taking into account ungulate pressure and its interactive effect with elevation when forecasting the regeneration of mountain forests under a changing climate.

关键信息在欧洲山地森林中,银冷杉(Abies alba Mill.)、梧桐枫(Acer pseudoplatanus L.)、欧洲山毛榉(Fagus sylvatica L.)和挪威云杉(Picea abies (L.) H. Karst.)幼苗的生长受有蹄类动物啃食的影响比受海拔高度的影响更大。背景由于山地森林极易受到气候变化的影响,人们对山地森林的再生越来越关注,而在过去几十年中,野生蹄类动物数量的增加及其活动范围的扩大对幼树的存活和生长造成了额外的限制。因此,了解这种制约因素如何随海拔高度而变化,是评估种群增加对山地森林再生的影响的关键。方法我们在法国到瑞典北部的七个海拔梯度(从 400 米到 2013 米)上监测了银冷杉、梧桐枫树、欧洲山毛榉和挪威云杉幼苗的高度生长和被啃食的情况。结果两种最适口的树种--冷杉和枫树--的幼苗在高海拔地区更容易被啃食,而云杉的情况则相反。除挪威云杉外,所有树种的幼苗生长都会受到啃食,而海拔高度对幼苗生长没有直接影响。对于欧洲山地森林的四种主要树种来说,在海拔较高的地方,杉木幼苗的生长受到的影响更大。然而,海拔高度既会影响啃食概率,也会影响啃食对幼苗生长的影响。我们的研究结果突出表明,在预测气候变化下的山地森林再生时,必须考虑到有蹄类动物的压力及其与海拔的交互影响。
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引用次数: 0
Inter-provenance variability and phenotypic plasticity of wood and leaf traits related to hydraulic safety and efficiency in seven European beech (Fagus sylvatica L.) provenances differing in yield 七个产量不同的欧洲山毛榉(Fagus sylvatica L.)产地与水力安全和效率相关的木材和叶片性状的产地间变异性和表型可塑性
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-03-04 DOI: 10.1186/s13595-024-01227-w

Abstract

Key message

Seven European beech provenances differing largely in growth performance were grown at two common garden sites in Germany and Slovakia. The intra-specific variability of most traits was explained more by phenotypic plasticity than inter-provenance variability, and efficiency-related traits showed a higher phenotypic plasticity than safety-related traits.

Context

To maintain climate-resilient future forests, replicated common-garden experiments are suited for developing assisted migration strategies for key tree species.

Aims

We analysed the magnitude of inter-provenance variability and phenotypic plasticity for 12 functional traits of European beech (Fagus sylvatica L.) and analysed whether the climate at the place of origin left an imprint. Moreover, we asked whether growth is unrelated to xylem safety and to what extent the foliar, xylem and growth-related traits are coordinated.

Methods

Terminal branches were collected from 19-year-old and 22-year-old trees of seven European beech provenances planted at two common garden sites in Germany and Slovakia, respectively. Three hydraulic, three wood anatomical and four foliar traits were measured and related to two growth-related variables.

Results

At the two sites, the same pair of provenances showed the highest and lowest growth. Nevertheless, a high degree of phenotypic plasticity was observed, as all traits differed significantly between sites after accounting for provenance effects, with hydraulic safety-related traits showing the lowest and efficiency-related traits the highest plasticity. There was no evidence for inter-provenance variability in xylem embolism resistance (P 50) or the foliar carbon isotope signature (δ13C), a proxy for intrinsic water use efficiency (iWUE), and both were unrelated to growth. P 50 was positively correlated with the lumen-to-sapwood area ratio and vessel density.

Conclusions

Because of the lacking trade-off between embolism resistance and growth, highly productive provenances can be selected without reducing the drought tolerance of the branch xylem. However, as xylem safety is only one element of a trees’ drought response, it may be beneficial to select provenances with other more conservative drought adaptations such as smaller vessel lumen areas for increasing xylem safety and small supported total leaf areas for reduction of total transpiration.

摘要 关键信息 在德国和斯洛伐克的两个共同园地种植了生长性能大不相同的七个欧洲山毛榉品种。表型可塑性比品种间变异更能解释大多数性状的种内变异,与效率相关的性状比与安全相关的性状表现出更高的表型可塑性。 背景 为保持未来森林的气候适应性,重复的共同园林实验适合于为关键树种制定辅助迁移策略。 目的 我们分析了欧洲山毛榉(Fagus sylvatica L.)12个功能特征的产地间变异性和表型可塑性的大小,并分析了原产地的气候是否会留下印记。此外,我们还询问了生长是否与木质部安全无关,以及叶片、木质部和生长相关性状的协调程度。 方法 从分别种植在德国和斯洛伐克两个共同园地的 7 个欧洲山毛榉产地的 19 年树龄和 22 年树龄的树上采集顶枝。测量了三个水力特征、三个木材解剖特征和四个叶片特征,并将其与两个生长相关变量联系起来。 结果 在这两个地点,同一对品种的生长量最高和最低。然而,表型可塑性很强,因为在考虑了原产地影响后,不同地点的所有性状都有显著差异,其中与水力安全相关的性状可塑性最小,而与效率相关的性状可塑性最大。没有证据表明木质部抗栓塞性(P 50)或叶面碳同位素特征(δ13C)存在产地间差异,而叶面碳同位素特征是内在水分利用效率(iWUE)的代表,两者都与生长无关。P 50 与管腔与边材面积比和血管密度呈正相关。 结论 由于抗栓塞性和生长之间缺乏权衡,因此可以在不降低树枝木质部耐旱性的情况下选择高产品种。然而,木质部的安全性只是树木抗旱能力的一个要素,因此选择具有其他更保守的抗旱适应性的产地可能是有益的,如较小的血管腔面积可提高木质部的安全性,较小的支撑叶片总面积可减少总蒸腾量。
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引用次数: 0
Canopy gap impacts on soil organic carbon and nutrient dynamic: a meta-analysis 树冠间隙对土壤有机碳和养分动态的影响:荟萃分析
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-03-04 DOI: 10.1186/s13595-024-01224-z
Ran Tong, Biyong Ji, G. Geoff Wang, Chenyang Lou, Cong Ma, Nianfu Zhu, Wenwen Yuan, Tonggui Wu

Key message

The forest canopy gaps, formed by natural or anthropogenic factors, have been found to reduce soil carbon content and increase nutrient availability. The magnitudes of these effects have been observed to increase with gap age and size, and are largely influenced by changes in temperature, precipitation, and solar radiation.

Context

Local studies have illustrated the influence of canopy gaps on the spatial heterogeneity of soil carbon and nutrients, playing a pivotal role in driving forest regeneration and succession. Nevertheless, it remains largely unknown whether the response of soil carbon and nutrient content to gap formation is consistent across forest ecosystems at global scale.

Aims

The aim of this paper is to assess the homogeneity of the observed responses of soil carbon and nutrients following gap formation among a wide array of forest ecosystems and climatic regions.

Methods

We performed a meta-analysis synthesizing 2127 pairwise observations from 52 published articles to quantify the changes in in soil physical, chemical, and microbial variables resulting from gap creation in natural forests and plantations spanning tropical to boreal regions.

Results

Canopy gaps resulted in significant decrease of soil organic carbon (Corg) and microbial carbon (Cmic). The concentrations of ammonium (NH4+), nitrate (NO3), and available phosphorus (available P) increased following gap creation. These changes mainly occurred in the growing season and in the mineral soil layer, becoming more pronounced with increasing gap age and size. The change in Corg was negatively regulated by mean annual precipitation, and was associated with the changes in Nt and Nmic. The change in NH4+ was positively regulated by mean annual temperature, and was associated with the changes in available P and oxidoreductases (Ox-EEAs). The model explaining the change in soil carbon content exhibited a higher explanatory power than the one accounting for changes in soil nutrient availability.

Conclusion

The results indicated that forest canopy gaps resulted in a reduction in soil carbon content and an increase in nutrient availability. These findings contribute to a better understanding of the role of small-scale disturbances as drivers of forest ecosystem succession.

关键信息人们发现,由自然或人为因素形成的林冠间隙会降低土壤碳含量,增加养分供应。背景局部研究表明,冠层间隙对土壤碳和养分的空间异质性有影响,在推动森林再生和演替方面起着关键作用。然而,在全球范围内,不同森林生态系统的土壤碳含量和养分含量对树冠间隙形成的响应是否一致,这在很大程度上仍是个未知数。结果树冠间隙导致土壤有机碳(Corg)和微生物碳(Cmic)显著减少。铵(NH4+)、硝酸盐(NO3-)和可利用磷(可利用磷)的浓度在树冠间隙形成后有所增加。这些变化主要发生在生长季节和矿质土层中,随着隙缝年龄和大小的增加而变得更加明显。Corg 的变化受年平均降水量的负向调节,并与 Nt 和 Nmic 的变化相关。NH4+ 的变化受年平均气温的正向调节,与可用磷和氧化还原酶(Ox-EEAs)的变化有关。解释土壤碳含量变化的模型比解释土壤养分可用性变化的模型具有更高的解释力。这些发现有助于更好地理解小规模干扰在森林生态系统演替中的作用。
{"title":"Canopy gap impacts on soil organic carbon and nutrient dynamic: a meta-analysis","authors":"Ran Tong, Biyong Ji, G. Geoff Wang, Chenyang Lou, Cong Ma, Nianfu Zhu, Wenwen Yuan, Tonggui Wu","doi":"10.1186/s13595-024-01224-z","DOIUrl":"https://doi.org/10.1186/s13595-024-01224-z","url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Key message</h3><p>The forest canopy gaps, formed by natural or anthropogenic factors, have been found to reduce soil carbon content and increase nutrient availability. The magnitudes of these effects have been observed to increase with gap age and size, and are largely influenced by changes in temperature, precipitation, and solar radiation.</p><h3 data-test=\"abstract-sub-heading\">Context</h3><p>Local studies have illustrated the influence of canopy gaps on the spatial heterogeneity of soil carbon and nutrients, playing a pivotal role in driving forest regeneration and succession. Nevertheless, it remains largely unknown whether the response of soil carbon and nutrient content to gap formation is consistent across forest ecosystems at global scale.</p><h3 data-test=\"abstract-sub-heading\">Aims</h3><p>The aim of this paper is to assess the homogeneity of the observed responses of soil carbon and nutrients following gap formation among a wide array of forest ecosystems and climatic regions.</p><h3 data-test=\"abstract-sub-heading\">Methods</h3><p>We performed a meta-analysis synthesizing 2127 pairwise observations from 52 published articles to quantify the changes in in soil physical, chemical, and microbial variables resulting from gap creation in natural forests and plantations spanning tropical to boreal regions.</p><h3 data-test=\"abstract-sub-heading\">Results</h3><p>Canopy gaps resulted in significant decrease of soil organic carbon (<i>C</i><sub>org</sub>) and microbial carbon (<i>C</i><sub>mic</sub>). The concentrations of ammonium (NH<sub>4</sub><sup>+</sup>), nitrate (NO<sub>3</sub><sup>−</sup>), and available phosphorus (available P) increased following gap creation. These changes mainly occurred in the growing season and in the mineral soil layer, becoming more pronounced with increasing gap age and size. The change in <i>C</i><sub>org</sub> was negatively regulated by mean annual precipitation, and was associated with the changes in N<sub>t</sub> and N<sub><i>mic</i></sub>. The change in NH<sub>4</sub><sup>+</sup> was positively regulated by mean annual temperature, and was associated with the changes in available P and oxidoreductases (Ox-EEAs). The model explaining the change in soil carbon content exhibited a higher explanatory power than the one accounting for changes in soil nutrient availability.</p><h3 data-test=\"abstract-sub-heading\">Conclusion</h3><p>The results indicated that forest canopy gaps resulted in a reduction in soil carbon content and an increase in nutrient availability. These findings contribute to a better understanding of the role of small-scale disturbances as drivers of forest ecosystem succession.</p>","PeriodicalId":7994,"journal":{"name":"Annals of Forest Science","volume":"22 1","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-03-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140026322","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Wood, knots and bark extractives for oak, beech and Douglas fir: a dataset based on a review of the scientific literature 橡树、山毛榉和花旗松的木材、树节和树皮萃取物:基于科学文献综述的数据集
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-02-19 DOI: 10.1186/s13595-024-01223-0
Béatrice Richard, Alain Bénard, Stéphane Dumarçay, Francis Colin

Wood_db-chemistry gathers information on oak, beech and Douglas fir extractives studied between 1950 and 2020. The data can be used by researchers, stakeholders in the forest-wood sector and the chemical industry to make the most of the extractives and their bioactive properties through knowledge of their diversity in the forest resource. Dataset access is at https://doi.org/10.57745/QZYPUA. Associated metadata are available at https://metadata-afs.nancy.inra.fr/geonetwork/srv/fre/catalog.search#/metadata/4f8c07d2-c0f6-4958-8f74-936054a9870a.

Wood_db-chemistry 收集了 1950 年至 2020 年间研究的橡树、山毛榉和花旗松萃取物的信息。研究人员、森林木材行业的利益相关者和化工行业可利用这些数据,通过了解森林资源中萃取物的多样性,最大限度地利用萃取物及其生物活性特性。数据集访问网址:https://doi.org/10.57745/QZYPUA。相关元数据请访问 https://metadata-afs.nancy.inra.fr/geonetwork/srv/fre/catalog.search#/metadata/4f8c07d2-c0f6-4958-8f74-936054a9870a。
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引用次数: 0
Low persistence of Phytophthora ramorum (Werres, De Cock, and Man in ‘t Veld) in western France after implementation of eradication measures 在法国西部实施根除措施后,Phytophthora ramorum(Werres、De Cock 和 Man in 't Veld)的持久性较低
IF 3 3区 农林科学 Q1 FORESTRY Pub Date : 2024-02-07 DOI: 10.1186/s13595-024-01222-1

Abstract

Key message

Presence of Phytophthora ramorum (Werres, De Cock, and Man in ‘t Veld) in western France was studied after the detection of this invasive pathogen in 2017 in Larix kaempferi (Lamb.) and eradication of the affected stands. P. ramorum was seldom detected in the area of the outbreak in the year following eradication. However, we confirm that P. ramorum can multiply to epidemic level on chestnuts (Castanea sativa Mill.) in the absence of larch (Larix spp.). This represents the major risk in France.

Context

Phytophthora ramorum is an invasive oomycete that causes significant damage in the USA and Europe. Although the pathogen has been present in nurseries in France since 2002, the first outbreaks in forest stands were identified in 2017 in plantations of Larix kaempferi in two forests in western France (Saint-Cadou and Hanvec). In order to limit the development of the epidemic, neighboring larch stands were clear-cut.

Aim

This study investigated the presence of P. ramorum in the affected area after the eradication treatment.

Methods

Larch stands located within a 18-km radius of the reported outbreaks were investigated. We also monitored the native woody hosts present in infected clear-cut larch stands and in the vicinity of seven ornamental nurseries that had been infected by P. ramorum on several occasions in the past.

Results

Overall, a very limited presence of P. ramorum was detected in 2018–2021. Two new stands of infected L. kaempferi were found close to the main initial outbreak, in Saint-Cadou and Saint-Rivoal. The pathogen was only detected on rhododendrons and chestnut trees (Castanea sativa Mill.) in the vicinity of the outbreaks. In the Saint-Cadou state Forest, an outbreak of the disease developed in 2019–2021 on chestnut trees even though all the mature larch trees had been felled. P. ramorum was also detected near two of the formerly infected ornamental nurseries, on Castanea sativa and on rhododendrons.

Conclusion

While larches and rhododendrons are uncommon in the forests of north-western France, chestnut trees are present in 21–25% of the forest and therefore represent the major risk for the survival of P. ramorum in the region.

摘要:2017年在Larix kaempferi (Lamb.)发现了Phytophthora ramorum (Werres, De Cock, and Man in 't Veld)这一入侵病原体,并根除了受影响的林木后,对法国西部Phytophthora ramorum (Werres, De Cock, and Man in 't Veld)的存在情况进行了研究。在根除后的一年里,疫情爆发地区很少检测到鼠疫。然而,我们证实,在没有落叶松(Larix spp.)的情况下,P. ramorum 可在栗子(Castanea sativa Mill.)这也是法国的主要风险所在。 背景 Phytophthora ramorum 是一种入侵的卵菌,在美国和欧洲造成了严重危害。虽然该病原体自 2002 年起就出现在法国的苗圃中,但 2017 年在法国西部(圣卡杜和汉韦克)的两片森林中的 Larix kaempferi 人工林中首次发现了该病原体在林分中的爆发。为了限制疫情的发展,邻近的落叶松林被砍伐。 目的 本研究调查了根除处理后受影响地区的落叶松疫情。 方法 调查了位于报告疫情 18 公里半径范围内的落叶松林。我们还监测了受感染的落叶松林中的原生木质寄主,以及过去曾多次受到 P. ramorum 感染的七个观赏苗圃附近的原生木质寄主。 结果 总体而言,2018-2021 年检测到的落叶松寄主非常有限。在圣卡杜(Saint-Cadou)和圣里沃尔(Saint-Rivoal)的主要疫情爆发地附近,发现了两处新的受感染 L. kaempferi。病原体仅在疫情爆发附近的杜鹃花和栗树(Castanea sativa Mill.)上被检测到。在圣卡杜国家森林公园,尽管所有成熟的落叶松树都已被砍伐,但在 2019-2021 年,栗树上还是爆发了疫情。在两个曾受感染的观赏苗圃附近的蓖麻树和杜鹃花上也发现了 P. ramorum。 结论:落叶松和杜鹃花在法国西北部的森林中并不常见,而栗树在 21-25% 的森林中都有分布,因此栗树是 P. ramorum 在该地区生存的主要风险所在。
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引用次数: 0
期刊
Annals of Forest Science
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