The mitochondrial gene order in Thysanoptera is notably distinct and highly rearranged, with each species exhibiting its own unique arrangement. To elucidate the relationship between gene rearrangements and phylogeny, the complete mitochondrial genome (mitogenome) of the wheat pest, Aptinothrips stylifer, was sequenced and assembled, spanning a total length of 16,033 bp. Compared with the ancestral arthropod mitogenome, significant rearrangement differences were evident in A. stylifer, whereas the gene order between A. stylifer and Anaphothrips obscurus was similar. Phylogenetic trees were reconstructed based on all 13 protein-coding gene sequences using Bayesian inference and maximum-likelihood methods, both yielding similar topological structures. Notably, A. stylifer was robustly clustered with A. obscurus, affirming its classification within Anaphothrips genus group. This exemplifies the potential correlation between gene rearrangements and phylogeny in the Thripidae family. Additionally, the mitogenome of A. stylifer exhibited several atypical features, including: (1) Three putative control regions (CRs) in close proximity, with CR2 and CR3 displaying partial similarity, and CR1 differing in base composition; (2) Two transfer RNAs (tRNAs), trnS1 and trnV, lacking the DHU arm; (3) Two ribosomal RNA (rRNA) genes inverted and positioned distant from each other; (4) Negative AT and GC skew (AT skew = −0.001, GC skew = −0.077); (5) One transposition (nad6), one inverse transposition (trnQ), four inversions (trnF, trnH, trnC, and gene block nad1-trnL1-rrnL-trnV-rrnS), and four tandem duplication random loss events; and (6) Two protein-coding genes, nad2 and atp8, terminated with an incomplete stop codon “T”.
{"title":"The extraordinary rearrangement of mitochondrial genome of the wheat pest, Aptinothrips stylifer and the mitochondrial phylogeny of Thripidae (Thysanoptera)","authors":"Chengwen Li, Yuxin Gao, Dongxue Wang, Lihong Dang","doi":"10.1002/arch.22086","DOIUrl":"10.1002/arch.22086","url":null,"abstract":"<p>The mitochondrial gene order in Thysanoptera is notably distinct and highly rearranged, with each species exhibiting its own unique arrangement. To elucidate the relationship between gene rearrangements and phylogeny, the complete mitochondrial genome (mitogenome) of the wheat pest, <i>Aptinothrips stylifer</i>, was sequenced and assembled, spanning a total length of 16,033 bp. Compared with the ancestral arthropod mitogenome, significant rearrangement differences were evident in <i>A. stylifer</i>, whereas the gene order between <i>A. stylifer</i> and <i>Anaphothrips obscurus</i> was similar. Phylogenetic trees were reconstructed based on all 13 protein-coding gene sequences using Bayesian inference and maximum-likelihood methods, both yielding similar topological structures. Notably, <i>A. stylifer</i> was robustly clustered with <i>A. obscurus</i>, affirming its classification within <i>Anaphothrips</i> genus group. This exemplifies the potential correlation between gene rearrangements and phylogeny in the Thripidae family. Additionally, the mitogenome of <i>A. stylifer</i> exhibited several atypical features, including: (1) Three putative control regions (CRs) in close proximity, with CR2 and CR3 displaying partial similarity, and CR1 differing in base composition; (2) Two transfer RNAs (tRNAs), <i>trnS1</i> and <i>trnV</i>, lacking the DHU arm; (3) Two ribosomal RNA (rRNA) genes inverted and positioned distant from each other; (4) Negative AT and GC skew (AT skew = −0.001, GC skew = −0.077); (5) One transposition (<i>nad6</i>), one inverse transposition (<i>trnQ</i>), four inversions (<i>trnF, trnH, trnC</i>, and gene block <i>nad1-trnL1-rrnL-trnV-rrnS</i>), and four tandem duplication random loss events; and (6) Two protein-coding genes, <i>nad2</i> and <i>atp8</i>, terminated with an incomplete stop codon “T”.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139556854","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Elena Tafi, Simona Sagona, Valentina Meucci, Laura Bortolotti, Marta Galloni, Gherardo Bogo, Domenico Gatta, Lucia Casini, Marta Barberis, Massimo Nepi, Antonio Felicioli
Amino acids (AAs) are an abundant class of nectar solutes, and they are involved in the nectar attractiveness to flower visitors. Among the various AAs, proline is the most abundant proteogenic AA, and γ-amino butyric acid (GABA) and β-alanine are the two most abundant non-proteogenic AAs. These three AAs are known to affect insect physiology, being involved in flight metabolism and neurotransmission. The aim of this study was to investigate the effects of artificial diets enriched with either β-alanine, GABA, or proline on consumption, survival, and hemolymph composition in honey bees belonging to two different ages and with different metabolism (i.e., newly emerged and foragers). Differences in feed intake among diets were not observed, while a diet enriched with β-alanine improved the survival rate of newly emerged honey bees compared to the control group. Variations in the hemolymph AA concentrations occurred only in newly emerged honey bees, according to the diet and the time of hemolymph sampling. A greater susceptibility of young honey bees to enriched diets than older honey bees was observed. The variations in the concentrations of hemolymph AAs reflect either the accumulation of dietary AAs or the existence of metabolic pathways that may lead to the conversion of dietary AAs into different ones. This investigation could be an initial contribution to studying the complex dynamics that regulate hemolymph AA composition and its effect on honey bee physiology.
氨基酸(AAs)是一类丰富的花蜜溶质,它们与花蜜对访花者的吸引力有关。在各种 AAs 中,脯氨酸是含量最高的蛋白型 AAs,γ-氨基丁酸(GABA)和 β-丙氨酸是含量最高的两种非蛋白型 AAs。众所周知,这三种 AA 会影响昆虫的生理机能,参与飞行代谢和神经传递。本研究的目的是调查富含β-丙氨酸、GABA或脯氨酸的人工饲料对两种不同龄期和不同新陈代谢(即新巢蜂和觅食蜂)的蜜蜂的摄食量、存活率和血淋巴成分的影响。与对照组相比,富含β-丙氨酸的日粮提高了新巢蜂的存活率。根据日粮和血淋巴采样时间的不同,血淋巴中 AA 浓度的变化仅发生在刚出生的蜜蜂身上。据观察,幼龄蜜蜂比老龄蜜蜂更容易受到高浓度日粮的影响。血淋巴中 AAs 浓度的变化反映了食物 AAs 的积累或存在可能导致食物 AAs 转化为不同 AAs 的代谢途径。这项研究为研究调节血淋巴 AA 组成的复杂动态及其对蜜蜂生理的影响做出了初步贡献。
{"title":"Effect of amino acid enriched diets on hemolymph amino acid composition in honey bees","authors":"Elena Tafi, Simona Sagona, Valentina Meucci, Laura Bortolotti, Marta Galloni, Gherardo Bogo, Domenico Gatta, Lucia Casini, Marta Barberis, Massimo Nepi, Antonio Felicioli","doi":"10.1002/arch.22085","DOIUrl":"10.1002/arch.22085","url":null,"abstract":"<p>Amino acids (AAs) are an abundant class of nectar solutes, and they are involved in the nectar attractiveness to flower visitors. Among the various AAs, proline is the most abundant proteogenic AA, and γ-amino butyric acid (GABA) and β-alanine are the two most abundant non-proteogenic AAs. These three AAs are known to affect insect physiology, being involved in flight metabolism and neurotransmission. The aim of this study was to investigate the effects of artificial diets enriched with either β-alanine, GABA, or proline on consumption, survival, and hemolymph composition in honey bees belonging to two different ages and with different metabolism (i.e., newly emerged and foragers). Differences in feed intake among diets were not observed, while a diet enriched with β-alanine improved the survival rate of newly emerged honey bees compared to the control group. Variations in the hemolymph AA concentrations occurred only in newly emerged honey bees, according to the diet and the time of hemolymph sampling. A greater susceptibility of young honey bees to enriched diets than older honey bees was observed. The variations in the concentrations of hemolymph AAs reflect either the accumulation of dietary AAs or the existence of metabolic pathways that may lead to the conversion of dietary AAs into different ones. This investigation could be an initial contribution to studying the complex dynamics that regulate hemolymph AA composition and its effect on honey bee physiology.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139556630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jiaming Hou, Cheng Tan, Nan Chen, Yuan Zhou, Shaojun Huang, Huani Chen, Li Qian
Due to the high prevalence of diabetes mellitus, researchers have conducted numerous experimental animal studies. However, the mammalian diabetes model is cumbersome and expensive to operate, while the cheap and simple common silkworm diabetes model has the disadvantage of a short cycle time. Since the growth of silkworms is greatly affected by environmental factors, we extended the five-age cycle of silkworms by lowering the ambient temperature to establish a novel low-temperature silkworm diabetes model. Our goal was to determine whether the low-temperature feeding of a high-sugar diet to silkworms could serve as an effective animal model for diabetes. Also, we aimed to resolve certain issues concerning the normal temperature silkworm diabetes model, such as the short time frame for experiments and erratic fluctuations in blood sugar levels. Silkworms weighing between 0.9 and 1.0 g at the beginning of the fifth instar were selected, and we created diabetic silkworms by feeding mulberry leaves containing 4% glucose daily in a 16–20°C environment. When the silkworms were kept at a cooler temperature, the fifth instar stage lasted for an additional 9–11 days. In the model group, 83.3% of the silkworms had blood glucose levels greater than 7.8 mmol/L, while the total prevalence of diabetic silkworms was 89.8%. Moreover, JNK phosphorylation expression rose in the model group, while PI3K expression fell. Additionally, the JNK and PI3K signaling pathway expressions matched diabetic signals. Therefore, using silkworms to create a diabetes model in a cool environment is a straightforward and cost-effective approach to studying diabetes in animals.
{"title":"Establishment of diabetes mellitus model using Bombyx mori silkworms in a low-temperature environment","authors":"Jiaming Hou, Cheng Tan, Nan Chen, Yuan Zhou, Shaojun Huang, Huani Chen, Li Qian","doi":"10.1002/arch.22083","DOIUrl":"10.1002/arch.22083","url":null,"abstract":"<p>Due to the high prevalence of diabetes mellitus, researchers have conducted numerous experimental animal studies. However, the mammalian diabetes model is cumbersome and expensive to operate, while the cheap and simple common silkworm diabetes model has the disadvantage of a short cycle time. Since the growth of silkworms is greatly affected by environmental factors, we extended the five-age cycle of silkworms by lowering the ambient temperature to establish a novel low-temperature silkworm diabetes model. Our goal was to determine whether the low-temperature feeding of a high-sugar diet to silkworms could serve as an effective animal model for diabetes. Also, we aimed to resolve certain issues concerning the normal temperature silkworm diabetes model, such as the short time frame for experiments and erratic fluctuations in blood sugar levels. Silkworms weighing between 0.9 and 1.0 g at the beginning of the fifth instar were selected, and we created diabetic silkworms by feeding mulberry leaves containing 4% glucose daily in a 16–20°C environment. When the silkworms were kept at a cooler temperature, the fifth instar stage lasted for an additional 9–11 days. In the model group, 83.3% of the silkworms had blood glucose levels greater than 7.8 mmol/L, while the total prevalence of diabetic silkworms was 89.8%. Moreover, JNK phosphorylation expression rose in the model group, while PI3K expression fell. Additionally, the JNK and PI3K signaling pathway expressions matched diabetic signals. Therefore, using silkworms to create a diabetes model in a cool environment is a straightforward and cost-effective approach to studying diabetes in animals.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139556631","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Phospholipase A2 (PLA2) catalyzes phospholipids at the sn-2 position to release free fatty acids, including arachidonic acid (AA) or its precursor. The free AA is then oxygenated into different eicosanoids, which mediate the diverse physiological processes in insects. Any inhibition of the PLA2 catalysis would give rise to serious malfunctioning in insect growth and development. An onion moth, Acrolepiopsis sapporensis, encodes four different PLA2 genes (As-PLA2A–As-PLA2D), in which As-PLA2A is dominantly expressed at all developmental stages and in different larval tissues. RNA interference of the As-PLA2A expression significantly reduced the PLA2 activity of A. sapporensis, which suffered from immunosuppression. A recombinant As-PLA2A protein was purified from a bacterial expression system, which exhibited a typical Michaelis—Menten kinetics and hence susceptible to a specific inhibitor to sPLA2 and dithiothreitol. A total of 19 bacterial metabolites derived from Xenorhabdus and Photorhabdus were screened against the recombinant As-PLA2A. Five potent metabolites were highly inhibitory and followed a competitive enzyme inhibition. These five inhibitors suppressed the immune responses of A. sapporensis by inhibiting hemocyte-spreading behavior and phenoloxidase activity. However, an addition of AA could significantly rescue the immunosuppression induced by the selected inhibitors. These studies suggest that the recombinant As-PLA2A protein can be applied for high-throughput screening of insect immunosuppressive compounds.
{"title":"Screening of insect immune suppressors using a recombinant phospholipase A2 of a lepidopteran insect","authors":"Gahyeon Jin, Yonggyun Kim","doi":"10.1002/arch.22081","DOIUrl":"https://doi.org/10.1002/arch.22081","url":null,"abstract":"<p>Phospholipase A<sub>2</sub> (PLA<sub>2</sub>) catalyzes phospholipids at the <i>sn-2</i> position to release free fatty acids, including arachidonic acid (AA) or its precursor. The free AA is then oxygenated into different eicosanoids, which mediate the diverse physiological processes in insects. Any inhibition of the PLA<sub>2</sub> catalysis would give rise to serious malfunctioning in insect growth and development. An onion moth, <i>Acrolepiopsis sapporensis</i>, encodes four different PLA<sub>2</sub> genes (<i>As-PLA</i><sub><i>2</i></sub><i>A</i>–<i>As</i>-<i>PLA</i><sub><i>2</i></sub><i>D</i>), in which <i>As-PLA</i><sub><i>2</i></sub><i>A</i> is dominantly expressed at all developmental stages and in different larval tissues. RNA interference of the <i>As-PLA</i><sub><i>2</i></sub><i>A</i> expression significantly reduced the PLA<sub>2</sub> activity of <i>A. sapporensis</i>, which suffered from immunosuppression. A recombinant As-PLA<sub>2</sub>A protein was purified from a bacterial expression system, which exhibited a typical Michaelis—Menten kinetics and hence susceptible to a specific inhibitor to sPLA<sub>2</sub> and dithiothreitol. A total of 19 bacterial metabolites derived from <i>Xenorhabdus</i> and <i>Photorhabdus</i> were screened against the recombinant As-PLA<sub>2</sub>A. Five potent metabolites were highly inhibitory and followed a competitive enzyme inhibition. These five inhibitors suppressed the immune responses of <i>A. sapporensis</i> by inhibiting hemocyte-spreading behavior and phenoloxidase activity. However, an addition of AA could significantly rescue the immunosuppression induced by the selected inhibitors. These studies suggest that the recombinant As-PLA<sub>2</sub>A protein can be applied for high-throughput screening of insect immunosuppressive compounds.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139435118","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Vassiliki Labropoulou, Luoluo Wang, Christiana Magkrioti, Guy Smagghe, Luc Swevers
The single domain von Willebrand factor type C (SVWC) appears in small secreted peptides that are arthropod-specific and are produced following environmental stress or pathogen exposure. Most research has focused on proteins with SVWC domain that are induced after virus infection and are hypothesized to function as “cytokines” to regulate the innate immune response. The expansion of SVWC genes in insect species indicates that many other functions remain to be discovered. Research in shrimp has elucidated the adaptability of Vago-like peptides in the innate immune response against bacteria, fungi and viruses after activation by Jak-STAT and/or Toll/Imd pathways in which they can act as pathogen-recognition receptors or cytokine-like signaling molecules. SVWC factors also appear in scorpion venoms and tick saliva, underlining their versatility to acquire new functions. This review discusses the discovery and function of SVWC peptides from insects to crustaceans and chelicerates and reveals the enormous gaps in knowledge that remain to be filled to understand this enigmatic group of secreted peptides.
单结构域的 C 型 von Willebrand 因子(SVWC)出现在小型分泌肽中,这些肽具有节肢动物特异性,在环境压力或接触病原体后产生。大多数研究都集中在病毒感染后诱导的具有 SVWC 结构域的蛋白质上,这些蛋白质被认为具有 "细胞因子 "的功能,可以调节先天性免疫反应。昆虫物种中 SVWC 基因的扩展表明,还有许多其他功能有待发现。对虾的研究已经阐明了Vago-like肽在先天性免疫反应中的适应性,在被Jak-STAT和/或Toll/Imd途径激活后,它们可以作为病原体识别受体或细胞因子样信号分子来对抗细菌、真菌和病毒。SVWC 因子还出现在蝎子毒液和蜱唾液中,凸显了它们获得新功能的多功能性。这篇综述讨论了从昆虫到甲壳类动物和螯足类动物中 SVWC 肽的发现和功能,并揭示了要了解这组神秘的分泌肽,还有大量知识空白有待填补。
{"title":"Single domain von Willebrand factor type C “cytokines” and the regulation of the stress/immune response in insects","authors":"Vassiliki Labropoulou, Luoluo Wang, Christiana Magkrioti, Guy Smagghe, Luc Swevers","doi":"10.1002/arch.22071","DOIUrl":"10.1002/arch.22071","url":null,"abstract":"<p>The single domain von Willebrand factor type C (SVWC) appears in small secreted peptides that are arthropod-specific and are produced following environmental stress or pathogen exposure. Most research has focused on proteins with SVWC domain that are induced after virus infection and are hypothesized to function as “cytokines” to regulate the innate immune response. The expansion of <i>SVWC</i> genes in insect species indicates that many other functions remain to be discovered. Research in shrimp has elucidated the adaptability of Vago-like peptides in the innate immune response against bacteria, fungi and viruses after activation by Jak-STAT and/or Toll/Imd pathways in which they can act as pathogen-recognition receptors or cytokine-like signaling molecules. SVWC factors also appear in scorpion venoms and tick saliva, underlining their versatility to acquire new functions. This review discusses the discovery and function of SVWC peptides from insects to crustaceans and chelicerates and reveals the enormous gaps in knowledge that remain to be filled to understand this enigmatic group of secreted peptides.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/arch.22071","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139397307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
HSP90 is a highly conserved chaperone that facilitates the proliferation of many viruses, including silkworm (bombyx mori) nucleopolyhedrovirus (BmNPV), but the underlying regulatory mechanism was unclear. We found that suppression of HSP90 by 17-AAG, a HSP90-specific inhibitor, significantly reduced the expression of BmNPV capsid protein gp64 and viral genome replication, whereas overexpression of B. mori HSP90(BmHSP90) promoted BmNPV replication. Furthermore, in a recent study of the lysine acetylome of B. mori infected with BmNPV, we focused on the reduced viral proliferation due to changes of BmHSP90 lysine acetylation. Site-directed introduction of acetylated (K/Q) or deacetylated (K/R) mimic mutations into BmHSP90 revealed that lysine 64 (K64) acetylation activated the JAK/STAT pathway and reduced BmHSP90 ATPase activity, leading to diminished chaperone activity and ultimately inhibiting BmNPV proliferation. In this study, a single lysine 64 acetylation change of BmHSP90 was elucidated as a model of posttranslational modifications occurring in the wake of host-virus interactions, providing novel insights into potential antiviral strategies.
HSP90是一种高度保守的伴侣蛋白,它能促进包括家蚕(bombyx mori)核多角体病毒(BmNPV)在内的许多病毒的增殖,但其潜在的调控机制尚不清楚。我们发现,HSP90特异性抑制剂17-AAG抑制HSP90可显著降低BmNPV囊膜蛋白gp64的表达和病毒基因组的复制,而过表达B. mori HSP90(BmHSP90)则可促进BmNPV的复制。此外,在最近对感染了 BmNPV 的 B. mori 的赖氨酸乙酰化组的研究中,我们重点关注了由于 BmHSP90 赖氨酸乙酰化的变化而导致的病毒增殖的减少。将乙酰化(K/Q)或去乙酰化(K/R)模拟突变定点导入 BmHSP90 发现,赖氨酸 64(K64)乙酰化激活了 JAK/STAT 通路,降低了 BmHSP90 ATPase 活性,导致伴侣蛋白活性降低,最终抑制了 BmNPV 的增殖。本研究阐明了 BmHSP90 单个赖氨酸 64 乙酰化变化,将其作为宿主与病毒相互作用后发生的翻译后修饰的模型,为潜在的抗病毒策略提供了新的见解。
{"title":"K64 acetylation of heat shock protein 90 suppresses nucleopolyhedrovirus replication in Bombyx mori","authors":"Xizhen Zhang, Shiyi Ma, Chaoguang Gu, Miao Hu, Meng Miao, Yanping Quan, Wei Yu","doi":"10.1002/arch.22079","DOIUrl":"https://doi.org/10.1002/arch.22079","url":null,"abstract":"<p>HSP90 is a highly conserved chaperone that facilitates the proliferation of many viruses, including silkworm (<i>bombyx mori</i>) nucleopolyhedrovirus (BmNPV), but the underlying regulatory mechanism was unclear. We found that suppression of HSP90 by 17-AAG, a HSP90-specific inhibitor, significantly reduced the expression of BmNPV capsid protein gp64 and viral genome replication, whereas overexpression of <i>B. mori</i> HSP90(BmHSP90) promoted BmNPV replication. Furthermore, in a recent study of the lysine acetylome of <i>B. mori</i> infected with BmNPV, we focused on the reduced viral proliferation due to changes of BmHSP90 lysine acetylation. Site-directed introduction of acetylated (K/Q) or deacetylated (K/R) mimic mutations into BmHSP90 revealed that lysine 64 (K64) acetylation activated the JAK/STAT pathway and reduced BmHSP90 ATPase activity, leading to diminished chaperone activity and ultimately inhibiting BmNPV proliferation. In this study, a single lysine 64 acetylation change of BmHSP90 was elucidated as a model of posttranslational modifications occurring in the wake of host-virus interactions, providing novel insights into potential antiviral strategies.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139110044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The fall armyworm (FAW), Spodoptera frugiperda, is one of the most harmful plant pests in the world and is globally distributed from the American continent to the Asian region. The FAW USA population (Sf-USA) and China population (Sf-CHN), which belong to corn strain, showed different developmental periods and fecundity rates in lab conditions. Sf-USA had faster development and higher fecundity compared with Sf-CHN. To examine these differences, transcriptomic data from two FAW populations were analyzed and compared. Twelve gigabytes of transcripts were read from each sample and 21,258 differentially expressed genes (DEGs) were detected. DEGs with log2 fold change ≥ 2 were identified and compared in two populations. In comparison to the Sf-CHN, we discovered that 3471 and 3851 individual DEGs upregulated and downregulated, respectively. Comparing transcriptome profiles for differential gene expression revealed several DEGs, including 39 of ecdysone (E)-, 25 of juvenile hormone-, and 15 of insulin-related genes. We selected six of E-related genes, such as Neverland, Shade, Ecdysone receptor, Ecdysone-inducible protein 74 (E74), E75, and E78 from DEGs. Gene expressions were suppressed by RNA interference to confirm the physiological functions of the selected genes from Sf-USA. The Sf-USA showed developmental retardation and a decrease in fecundity rate by suppression of E-related genes. These findings show that biological characteristics between Sf-USA and Sf-CHN are influenced by E-related genes.
{"title":"Different development and fecundity between Spodoptera frugiperda USA and China populations, influenced by ecdysone-related genes","authors":"Du-Yeol Choi, Hyoung-ho Mo, Youngjin Park","doi":"10.1002/arch.22074","DOIUrl":"https://doi.org/10.1002/arch.22074","url":null,"abstract":"<p>The fall armyworm (FAW), <i>Spodoptera frugiperda</i>, is one of the most harmful plant pests in the world and is globally distributed from the American continent to the Asian region. The FAW USA population (Sf-USA) and China population (Sf-CHN), which belong to corn strain, showed different developmental periods and fecundity rates in lab conditions. Sf-USA had faster development and higher fecundity compared with Sf-CHN. To examine these differences, transcriptomic data from two FAW populations were analyzed and compared. Twelve gigabytes of transcripts were read from each sample and 21,258 differentially expressed genes (DEGs) were detected. DEGs with log2 fold change ≥ 2 were identified and compared in two populations. In comparison to the Sf-CHN, we discovered that 3471 and 3851 individual DEGs upregulated and downregulated, respectively. Comparing transcriptome profiles for differential gene expression revealed several DEGs, including 39 of ecdysone (E)-, 25 of juvenile hormone-, and 15 of insulin-related genes. We selected six of E-related genes, such as <i>Neverland</i>, <i>Shade</i>, <i>Ecdysone receptor</i>, <i>Ecdysone-inducible protein 74</i> (<i>E74</i>), <i>E75</i>, and <i>E78</i> from DEGs. Gene expressions were suppressed by RNA interference to confirm the physiological functions of the selected genes from Sf-USA. The Sf-USA showed developmental retardation and a decrease in fecundity rate by suppression of E-related genes. These findings show that biological characteristics between Sf-USA and Sf-CHN are influenced by E-related genes.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139110042","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pu Zhang, Yuting Cai, Lan Ma, Jinyan Chai, Zhijun Zhou
DNA barcoding is a useful addition to the traditional morphology-based taxonomy. A ca. 650 bp fragment of the 5′ end of mitochondrial cytochrome c oxidase subunit I (hereafter COI-5P) DNA barcoding was sued as a practical tool for Gampsocleis species identification. DNA barcodes from 889 specimens belonging to 8 putative Gampsocleis species was analyzed, including 687 newly generated DNA barcodes. These barcode sequences were clustered/grouped into Operational Taxonomic Units (OTUs) using the criteria of five algorithms, namely Barcode Index Number (BIN) System, Assemble Species by Automatic Partitioning (ASAP), a Java program uses an explicit, determinate algorithm to define Molecular Operational Taxonomic Unit (jMOTU), Generalized Mixed Yule Coalescent (GMYC), and Bayesian implementation of the Poisson Tree Processes model (bPTP). The Taxon ID Tree grouped sequences of morphospecies and almost all MOTUs in distinct nonoverlapping clusters. Both long- and short-winged Gampsocleis species are reciprocally monophyletic in the Taxon ID Tree. In BOLD, 889 barcode sequences are assigned to 17 BINs. The algorithms ASAP, jMOTU, bPTP and GMYC clustered the barcode sequences into 6, 13, 10, and 23 MOTUs, respectively. BIN, ASAP, and bPTP algorithm placed three long-winged species, G. sedakovii, G. sinensis and G. ussuriensis within the same MOTU. All species delimitation algorithms split two short-winged species,G. fletcheri and G. gratiosa into at least two MOTUs each, except for ASAP algorithm. More detailed molecular and morphological integrative studies are required to clarify the status of these MOTUs in the future.
DNA 条形码是对传统形态分类法的有益补充。线粒体细胞色素 c 氧化酶亚单位 I(以下简称 COI-5P)5′端的约 650 bp DNA 条形码片段被认为是鉴定 Gampsocleis 物种的实用工具。分析了来自 8 个推定 Gampsocleis 种类的 889 个标本的 DNA 条形码,其中包括 687 个新生成的 DNA 条形码。这些条形码序列按照五种算法的标准聚类/分组为操作分类单元(OTUs),这五种算法分别是条形码索引号系统(BIN)、通过自动分区组装物种(ASAP)、使用明确、确定算法定义分子操作分类单元的 Java 程序(jMOTU)、广义混合尤勒聚合(GMYC)和泊松树过程模型的贝叶斯实现(bPTP)。分类群 ID 树将形态种的序列和几乎所有的 MOTUs 分成不同的非重叠群。在分类群 ID 树中,长翅和短翅的 Gampsocleis 物种互为单系。在 BOLD 中,889 个条形码序列被分配到 17 个 BIN 中。ASAP、jMOTU、bPTP 和 GMYC 算法分别将条形码序列聚类为 6、13、10 和 23 个 MOTU。BIN、ASAP 和 bPTP 算法将三个长翅种(G. sedakovii、G. sinensis 和 G. ussuriensis)归入同一 MOTU。除 ASAP 算法外,所有物种划分算法都将两个短翅种(G. fletcheri 和 G. gratiosa)划分到至少两个 MOTU 中。未来需要进行更详细的分子和形态学综合研究,以明确这些MOTU的地位。
{"title":"DNA barcoding of the genus Gampsocleis (Orthoptera, Tettigoniidae) from China","authors":"Pu Zhang, Yuting Cai, Lan Ma, Jinyan Chai, Zhijun Zhou","doi":"10.1002/arch.22070","DOIUrl":"https://doi.org/10.1002/arch.22070","url":null,"abstract":"<p>DNA barcoding is a useful addition to the traditional morphology-based taxonomy. A ca. 650 bp fragment of the 5′ end of mitochondrial cytochrome <i>c</i> oxidase subunit I (hereafter COI-5P) DNA barcoding was sued as a practical tool for <i>Gampsocleis</i> species identification. DNA barcodes from 889 specimens belonging to 8 putative <i>Gampsocleis</i> species was analyzed, including 687 newly generated DNA barcodes. These barcode sequences were clustered/grouped into Operational Taxonomic Units (OTUs) using the criteria of five algorithms, namely Barcode Index Number (BIN) System, Assemble Species by Automatic Partitioning (ASAP), a Java program uses an explicit, determinate algorithm to define Molecular Operational Taxonomic Unit (jMOTU), Generalized Mixed Yule Coalescent (GMYC), and Bayesian implementation of the Poisson Tree Processes model (bPTP). The Taxon ID Tree grouped sequences of morphospecies and almost all MOTUs in distinct nonoverlapping clusters. Both long- and short-winged <i>Gampsocleis</i> species are reciprocally monophyletic in the Taxon ID Tree. In BOLD, 889 barcode sequences are assigned to 17 BINs. The algorithms ASAP, jMOTU, bPTP and GMYC clustered the barcode sequences into 6, 13, 10, and 23 MOTUs, respectively. BIN, ASAP, and bPTP algorithm placed three long-winged species, <i>G. sedakovii</i>, <i>G. sinensis</i> and <i>G. ussuriensis</i> within the same MOTU. All species delimitation algorithms split two short-winged species,<i>G. fletcheri</i> and <i>G. gratiosa</i> into at least two MOTUs each, except for ASAP algorithm. More detailed molecular and morphological integrative studies are required to clarify the status of these MOTUs in the future.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139110043","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In the present study, we tried to clarify when and how pupal commitment (PT) better to use PC occurs and what is involved in the PT of Bombyx mori. To clarify this, we examined the responsiveness of a wing disc to ecdysone, referring to metamorphosis-related BR-C, development-related Myc and Wnt, and chromatin remodeling-related genes at around the predicted PT stage of the Bombyx wing disc. Wing disc responsiveness to juvenile hormone (JH) and ecdysone was examined using Methoprene and 20-hydroxyecdysone (20E) in vitro. The body weight of B. mori increased after the last larval ecdysis, peaked at Day 5 of the fifth larval instar (D5L5), and then decreased. The responsiveness of the wing disc to JH decreased after the last larval ecdysis up to D3L5. Bmbr-c (the Broad Complex of B. mori) showed enhanced expression in D4L5 wing discs with 20E treatment. Some chromatin remodeler and histone modifier genes (Bmsnr1, Bmutx, and Bmtip60) showed upregulation after being cultured with 20E in D4L5 wing discs. A low concentration of 20E is suggested to induce responsiveness to 20E in D4L5 wing discs. Bmbr-c, Bmsnr1, Bmutx, and Bmtip60 were upregulated after being cultured with a low concentration of 20E in D4L5 wing discs. The expression of Bmmyc and Bmwnt1 did not show a change after being cultured with or without 20E in D4L5 wing discs, while enhanced expression was observed with 20E in D5L5 wing discs. From the present results, we concluded that PT of the wing disc of B. mori occurred beginning on D4L5 with the secretion of low concentrations of ecdysteroids. Bmsnr1, Bmutx, Bmtip60, and BR-C are also involved.
在本研究中,我们试图弄清更好地利用 PC 的蛹期承诺(PT)是何时和如何发生的,以及什么参与了森双翅目的蛹期承诺。为了弄清这一点,我们研究了在预计的双翅目翼盘PT阶段左右,翼盘对蜕皮激素的反应性,以及与变态相关的BR-C、与发育相关的Myc和Wnt以及与染色质重塑相关的基因。在体外使用甲氧苄啶和 20-羟基蜕皮激素(20E)检测了翅盘对幼年激素(JH)和蜕皮激素的反应。森蝇的体重在最后一次幼虫蜕皮后增加,在第五龄幼虫(D5L5)的第5天达到峰值,然后下降。翅盘对 JH 的反应性在最后一次幼虫蜕皮后至 D3L5 期下降。20E处理后,Bmbr-c(B. mori的Broad复合体)在D4L5翅盘中的表达增强。一些染色质重塑基因和组蛋白修饰基因(Bmsnr1、Bmutx 和 Bmtip60)在 D4L5 翅盘中经 20E 培养后出现上调。低浓度的 20E 可诱导 D4L5 翼片对 20E 产生反应。用低浓度 20E 培养 D4L5 翼片后,Bmbr-c、Bmsnr1、Bmutx 和 Bmtip60 表达上调。Bmmyc和Bmwnt1的表达在D4L5翼盘中用或不用20E培养后没有变化,而在D5L5翼盘中用20E培养后表达增强。根据本研究结果,我们得出结论:从 D4L5 开始,随着低浓度蜕皮激素的分泌,B. mori 的翼盘开始出现 PT。Bmsnr1、Bmutx、Bmtip60 和 BR-C 也参与其中。
{"title":"Ecdysone and gene expressions for chromatin remodeling, histone modification, and Broad Complex in relation to pupal commitment in Bombyx mori","authors":"Maki Saito, Shota Fujimoto, Hideki Kawasaki","doi":"10.1002/arch.22076","DOIUrl":"10.1002/arch.22076","url":null,"abstract":"<p>In the present study, we tried to clarify when and how pupal commitment (PT) better to use PC occurs and what is involved in the PT of <i>Bombyx mori</i>. To clarify this, we examined the responsiveness of a wing disc to ecdysone, referring to metamorphosis-related <i>BR-C</i>, development-related <i>Myc</i> and <i>Wnt</i>, and chromatin remodeling-related genes at around the predicted PT stage of the <i>Bombyx</i> wing disc. Wing disc responsiveness to juvenile hormone (JH) and ecdysone was examined using Methoprene and 20-hydroxyecdysone (20E) in vitro. The body weight of <i>B. mori</i> increased after the last larval ecdysis, peaked at Day 5 of the fifth larval instar (D5L5), and then decreased. The responsiveness of the wing disc to JH decreased after the last larval ecdysis up to D3L5. <i>Bmbr-c</i> (the Broad Complex of <i>B. mori</i>) showed enhanced expression in D4L5 wing discs with 20E treatment. Some chromatin remodeler and histone modifier genes <i>(Bmsnr1</i>, <i>Bmutx</i>, and <i>Bmtip60</i>) showed upregulation after being cultured with 20E in D4L5 wing discs. A low concentration of 20E is suggested to induce responsiveness to 20E in D4L5 wing discs. <i>Bmbr-c</i>, B<i>msnr1</i>, <i>Bmutx</i>, and <i>Bmtip60</i> were upregulated after being cultured with a low concentration of 20E in D4L5 wing discs. The expression of <i>Bmmyc</i> and <i>Bmwnt1</i> did not show a change after being cultured with or without 20E in D4L5 wing discs, while enhanced expression was observed with 20E in D5L5 wing discs. From the present results, we concluded that PT of the wing disc of <i>B. mori</i> occurred beginning on D4L5 with the secretion of low concentrations of ecdysteroids. Bmsnr1, Bmutx, Bmtip60, and BR-C are also involved.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139077445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jiayue Zhou, Shujing Wang, Shengjie Yu, Yanfei Li, Mu Qiao, Qing Zhao, Edward Hughes, Huaxi Liu, Wenjun Bu
Molecular data has become a powerful tool for species delimitation, particularly among those that present limited morphological differences; while the mitochondrial genome, with its moderate length, low cost of sequencing and fast lineage sorting, has emerged as a practical data set. Due to the limited morphological differences among the closely related species of Carbula Stål 1865, the species boundaries between Carbula abbreviata (Motschulsky, 1866), Carbula humerigera (Uhler, 1860), and Carbula putoni (Jakovlev, 1876) have remained particularly unclear. In this study, we applied two phylogenetic reconstruction methods to two data sets (mitogenome and COI) to assess the phylogeny of Carbula distributed in Asia, and five species delimitation methods to determine the boundaries between East Asian Carbula species. Our phylogenetic analyses showed Carbula to be paraphyletic; the seven known species distributed within East Asia to form a single monophyletic group, and within this, C. abbreviata, C. humerigera, C. putoni and middle-type to comprise a C. humerigera species complex. Our results show that mitogenome data alone, while effective in the differentiation of more distantly related Carbula species, is not sufficient to accurately delimit the species within this newly described complex.
{"title":"Limits of mitochondrial genes in delimiting species within a Carbula species complex (Hemiptera: Pentatomidae)","authors":"Jiayue Zhou, Shujing Wang, Shengjie Yu, Yanfei Li, Mu Qiao, Qing Zhao, Edward Hughes, Huaxi Liu, Wenjun Bu","doi":"10.1002/arch.22075","DOIUrl":"https://doi.org/10.1002/arch.22075","url":null,"abstract":"<p>Molecular data has become a powerful tool for species delimitation, particularly among those that present limited morphological differences; while the mitochondrial genome, with its moderate length, low cost of sequencing and fast lineage sorting, has emerged as a practical data set. Due to the limited morphological differences among the closely related species of <i>Carbula</i> Stål 1865, the species boundaries between <i>Carbula abbreviata</i> (Motschulsky, 1866), <i>Carbula humerigera</i> (Uhler, 1860), and <i>Carbula putoni</i> (Jakovlev, 1876) have remained particularly unclear. In this study, we applied two phylogenetic reconstruction methods to two data sets (mitogenome and COI) to assess the phylogeny of <i>Carbula</i> distributed in Asia, and five species delimitation methods to determine the boundaries between East Asian <i>Carbula</i> species. Our phylogenetic analyses showed <i>Carbula</i> to be paraphyletic; the seven known species distributed within East Asia to form a single monophyletic group, and within this, <i>C. abbreviata</i>, <i>C. humerigera</i>, <i>C. putoni</i> and middle-type to comprise a <i>C. humerigera</i> species complex. Our results show that mitogenome data alone, while effective in the differentiation of more distantly related <i>Carbula</i> species, is not sufficient to accurately delimit the species within this newly described complex.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139047495","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}