RNA interference (RNAi)-based gene silencing is a feasible and sustainable technology for the management of hemipteran pests by double-stranded RNA involvement, including small-interfering RNA, microRNA, and Piwi-interacting RNA (piRNA) pathways, that may help to decrease the usage of chemical insecticides. However, only a few data are available on the somatic piRNAs and their biogenesis genes in Riptortus pedestris, which serves as a significant pest of soybean (Glycine max). In this study, two family members of the PIWI gene were identified and characterized in R. pedestris, containing Argonaute3 (RpAgo3) and Aubergine (RpAub) genes with conserved protein domains, and their clusters were validated by phylogenetic analysis. In addition, they were widely expressed in all developmental stages of the whole body of R. pedestris and had lower expression levels in R. pedestris guts under different rearing conditions based on previous transcriptome sequencing. Furthermore, abundant clean reads were filtered to a total number of 45,998 piRNAs with uridine bias at the first nucleotide (nt) position and 26–32 nt in length by mapping onto the reference genome of R. pedestris according to our previous whole-transcriptome sequencing. Finally, our data revealed that gut bacterial changes were significantly positively or negatively associated with differentially expressed piRNAs among the five comparison groups with Pearson correlation analysis. In conclusion, these findings paved new avenues for the application of RNAi-based biopesticides for broad-spectrum hemipteran pest control.
{"title":"Identification and expression patterns of somatic piRNAs and PIWI genes in Riptortus pedestris (Hemiptera: Alydidae)","authors":"Yipeng Ren, Wenhao Dong, Wenjun Bu, Huaijun Xue","doi":"10.1002/arch.22107","DOIUrl":"https://doi.org/10.1002/arch.22107","url":null,"abstract":"<p>RNA interference (RNAi)-based gene silencing is a feasible and sustainable technology for the management of hemipteran pests by double-stranded RNA involvement, including small-interfering RNA, microRNA, and Piwi-interacting RNA (piRNA) pathways, that may help to decrease the usage of chemical insecticides. However, only a few data are available on the somatic piRNAs and their biogenesis genes in <i>Riptortus pedestris</i>, which serves as a significant pest of soybean (<i>Glycine max</i>). In this study, two family members of the <i>PIWI</i> gene were identified and characterized in <i>R. pedestris</i>, containing <i>Argonaute3</i> (Rp<i>Ago3</i>) and <i>Aubergine</i> (Rp<i>Aub</i>) genes with conserved protein domains, and their clusters were validated by phylogenetic analysis. In addition, they were widely expressed in all developmental stages of the whole body of <i>R. pedestris</i> and had lower expression levels in <i>R. pedestris</i> guts under different rearing conditions based on previous transcriptome sequencing. Furthermore, abundant clean reads were filtered to a total number of 45,998 piRNAs with uridine bias at the first nucleotide (nt) position and 26–32 nt in length by mapping onto the reference genome of <i>R. pedestris</i> according to our previous whole-transcriptome sequencing. Finally, our data revealed that gut bacterial changes were significantly positively or negatively associated with differentially expressed piRNAs among the five comparison groups with Pearson correlation analysis. In conclusion, these findings paved new avenues for the application of RNAi-based biopesticides for broad-spectrum hemipteran pest control.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-04-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140537567","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In this study, we employed high-throughput sequencing technology to determine the complete mitochondrial genomes of six ground beetles, encompassing five Harpalinae species and one Carabinae species. The sizes of mitochondrial genomes ranged from 15,334 to 16,972 bp, encompassing 37 genes, including 13 protein-coding genes, 22 transfer RNA genes, and 2 ribosomal RNA genes. Furthermore, each species was found to possess a putative control region. Combining with 65 published mitochondrial genome sequences of Carabidae as ingroups and four species from Trachypachidae, Gyrinidae and Dytiscidae as outgroups, we conducted phylogenetic analyses utilizing Maximum likelihood and Bayesian inference methods. Moreover, we reconstructed a species tree of Carabidae based on mitochondrial genome data using the coalescent-based species tree method (ASTRAL). The results revealed that the family Carabidae was not a monophyletic group. The subfamily Harpalinae was supported to be a monophyletic group in Maximum likelihood analysis. Although the subfamily Carabinae was found to be nonmonophyletic in the concatenation analyses under both Maximum likelihood and Bayesian inference criteria, it was identified as a monophyletic group in the species tree analysis.
{"title":"Six complete mitochondrial genomes of ground beetles from the Harpalinae and Carabinae (Coleoptera, Carabidae) with phylogenetic analysis based on mitogenomic data","authors":"Xingyu Lin, Nan Song, Miaomiao Wang","doi":"10.1002/arch.22108","DOIUrl":"https://doi.org/10.1002/arch.22108","url":null,"abstract":"<p>In this study, we employed high-throughput sequencing technology to determine the complete mitochondrial genomes of six ground beetles, encompassing five Harpalinae species and one Carabinae species. The sizes of mitochondrial genomes ranged from 15,334 to 16,972 bp, encompassing 37 genes, including 13 protein-coding genes, 22 transfer RNA genes, and 2 ribosomal RNA genes. Furthermore, each species was found to possess a putative control region. Combining with 65 published mitochondrial genome sequences of Carabidae as ingroups and four species from Trachypachidae, Gyrinidae and Dytiscidae as outgroups, we conducted phylogenetic analyses utilizing Maximum likelihood and Bayesian inference methods. Moreover, we reconstructed a species tree of Carabidae based on mitochondrial genome data using the coalescent-based species tree method (ASTRAL). The results revealed that the family Carabidae was not a monophyletic group. The subfamily Harpalinae was supported to be a monophyletic group in Maximum likelihood analysis. Although the subfamily Carabinae was found to be nonmonophyletic in the concatenation analyses under both Maximum likelihood and Bayesian inference criteria, it was identified as a monophyletic group in the species tree analysis.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 4","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140345614","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Li, C., Gao, Y., Wang, D. & Dang, L. (2024) The extraordinary rearrangement of mitochondrial genome of the wheat pest, Aptinothrips stylifer and the mitochondrial phylogeny of Thripidae (Thysanoptera). Archives of Insect Biochemistry and Physiology, 115(1), e22086. Available from: https://doi.org/10.1002/arch.22086.
In Figure 1, the thrips picture in the circular representation of the complete mt genome of Aptinothrips stylifer was incorrect. The correct figure is shown below.
We apologize for this error.
Li, C., Gao, Y., Wang, D. & Dang, L. (2024) The extraordinary rearrangement of mitochondrial genome of the wheat pest, Aptinothrips stylifer and the mitochondrial phylogeny of Thripidae (Thysanoptera).Archives of Insect Biochemistry and Physiology, 115(1), e22086.Available from: https://doi.org/10.1002/arch.22086.In 图 1,在 Aptinothrips stylifer 完整 mt 基因组的环形图中,蓟马的图片是不正确的。正确的图如下所示。图 1在图形浏览器中打开PowerPoint Aptinothrips stylifer 完整线粒体基因组的环形表示。箭头表示基因转录的方向。PCGs 显示为蓝紫色箭头,rRNA 基因显示为绿色箭头,tRNA 基因显示为粉红色紫色箭头,CRs 显示为橙色箭头。后内圈表示 GC 含量,GC-skew 表示与整个序列平均值的偏差。图片是用奥林巴斯 BX53 拍摄的幻灯片标本,并在 Adobe Photoshop 2022 v23.0.2.101 中手动编辑。
{"title":"Correction to “The extraordinary rearrangement of mitochondrial genome of the wheat pest, Aptinothrips stylifer and the mitochondrial phylogeny of Thripidae (Thysanoptera)”","authors":"","doi":"10.1002/arch.22095","DOIUrl":"10.1002/arch.22095","url":null,"abstract":"<p>Li, C., Gao, Y., Wang, D. & Dang, L. (2024) The extraordinary rearrangement of mitochondrial genome of the wheat pest, <i>Aptinothrips stylifer</i> and the mitochondrial phylogeny of Thripidae (Thysanoptera). <i>Archives of Insect Biochemistry and Physiology</i>, 115(1), e22086. Available from: https://doi.org/10.1002/arch.22086.</p><p>In Figure 1, the thrips picture in the circular representation of the complete mt genome of <i>Aptinothrips stylifer</i> was incorrect. The correct figure is shown below.</p><p>We apologize for this error.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/arch.22095","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140302255","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
<p>This special issue focuses on the evolution of insects. The following is a general introduction to the articles in this special issue. It includes 14 research articles that provide new insights into insect diversity and evolution.</p><p>The first topic covered in this special issue is the comparative analysis of insect mitogenomes and phylogenetics. Seven papers were published on this subject, including those by Pakrashi et al. (<span>2023</span>), Qi et al. (<span>2023</span>), Huang et al. (<span>2023</span>), Li et al. (<span>2023</span>), Guo et al. (<span>2023</span>), Li et al. (<span>2024b</span>) and Lin et al. (<span>2024</span>). Pakrashi et al. (<span>2023</span>) specifically focused on the invasive pest species <i>Thrips parvispinus</i>, characterizing its complete mitochondrial genome. The phylogenetic analysis supported the monophyly of Phlaeothripinae and Idolothripinae under suborder Tubulifera. Qi et al. (<span>2023</span>) analyzed the mitogenomes of five <i>Thienemanniella</i> species and explored their interspecific relationships based on mitogenomics data. Huang et al. (<span>2023</span>) reported four mitogenomes of Elateridae and conducted comparative analyses to further understand their evolutionary patterns. The phylogenetic results confirmed the monophyly of Cardiophorinae, Agrypninae, and Elaterinae with high support. Li et al. (<span>2024b</span>) obtained the mitogenome of <i>Cricotopu</i> (<i>Pseudocricotopus</i>) <i>cf. montanus</i> and nine other <i>Cricotopus</i> species for phylogenetic analysis. Guo et al. (<span>2023</span>) expored the interrelationships among the syrphid and pipunculid members of Syrphoidea using mitochondial genome sequences of 152 taxa (9 newly sequenced). The results approved that the Syrphoidea was nonmonophyletic and Microdontinae was sister to all other Syrphidae. Li et al. (<span>2024a</span>) demonstrates the close relationship between gene rearrangements and phylogeny in Thripidae. The phylogenetic trees confirmed the monophyly of four families of Thysanoptera and the phylogenetic status of <i>Aptinothrips stylifer</i>. Lin et al. (<span>2024</span>) combined six newly seqenced and 65 published mitochondrial genomes from Carabidae to reconstruct the phylogenetic tree of this family, they suggested that Carabidae is not a monophyletic group, but the monophyly of each subfamilies (Carabinae and Harpalinae) is still controversial.</p><p>The second topic addressed in this special issue is the integrative taxonomy of insects, as discussed by Yu et al. (<span>2023</span>) and Li et al. (<span>2023</span>). Yu et al. (<span>2023</span>) utilized a combination of cladistics, ABGD, jMOTU, bPTP, and morphologic methods to confirm the existence of nine <i>Ceriagrion</i> species in China. Their study also reported two synonyms, one new record, one distribution elimination, and three misidentifications. Li et al. (<span>2023</span>) reviewed <i>Rheotanytarsus guineensis</i> species group from
感谢 Yonggyun Kim 邀请我们担任《昆虫生物化学与生理学档案》的客座编辑。我们还要感谢本特刊的所有撰稿人分享了他们的工作,并感谢责任审稿人提出的宝贵意见,这些意见大大提高了这些稿件的质量。聂瑞娥起草了稿件,张守科和薛怀军修改了稿件。所有作者都阅读并批准了最终稿件。
{"title":"Diversity, adaptation, and evolution II: Preface","authors":"Rui-E Nie, Shou-Ke Zhang, Huai-Jun Xue","doi":"10.1002/arch.22097","DOIUrl":"10.1002/arch.22097","url":null,"abstract":"<p>This special issue focuses on the evolution of insects. The following is a general introduction to the articles in this special issue. It includes 14 research articles that provide new insights into insect diversity and evolution.</p><p>The first topic covered in this special issue is the comparative analysis of insect mitogenomes and phylogenetics. Seven papers were published on this subject, including those by Pakrashi et al. (<span>2023</span>), Qi et al. (<span>2023</span>), Huang et al. (<span>2023</span>), Li et al. (<span>2023</span>), Guo et al. (<span>2023</span>), Li et al. (<span>2024b</span>) and Lin et al. (<span>2024</span>). Pakrashi et al. (<span>2023</span>) specifically focused on the invasive pest species <i>Thrips parvispinus</i>, characterizing its complete mitochondrial genome. The phylogenetic analysis supported the monophyly of Phlaeothripinae and Idolothripinae under suborder Tubulifera. Qi et al. (<span>2023</span>) analyzed the mitogenomes of five <i>Thienemanniella</i> species and explored their interspecific relationships based on mitogenomics data. Huang et al. (<span>2023</span>) reported four mitogenomes of Elateridae and conducted comparative analyses to further understand their evolutionary patterns. The phylogenetic results confirmed the monophyly of Cardiophorinae, Agrypninae, and Elaterinae with high support. Li et al. (<span>2024b</span>) obtained the mitogenome of <i>Cricotopu</i> (<i>Pseudocricotopus</i>) <i>cf. montanus</i> and nine other <i>Cricotopus</i> species for phylogenetic analysis. Guo et al. (<span>2023</span>) expored the interrelationships among the syrphid and pipunculid members of Syrphoidea using mitochondial genome sequences of 152 taxa (9 newly sequenced). The results approved that the Syrphoidea was nonmonophyletic and Microdontinae was sister to all other Syrphidae. Li et al. (<span>2024a</span>) demonstrates the close relationship between gene rearrangements and phylogeny in Thripidae. The phylogenetic trees confirmed the monophyly of four families of Thysanoptera and the phylogenetic status of <i>Aptinothrips stylifer</i>. Lin et al. (<span>2024</span>) combined six newly seqenced and 65 published mitochondrial genomes from Carabidae to reconstruct the phylogenetic tree of this family, they suggested that Carabidae is not a monophyletic group, but the monophyly of each subfamilies (Carabinae and Harpalinae) is still controversial.</p><p>The second topic addressed in this special issue is the integrative taxonomy of insects, as discussed by Yu et al. (<span>2023</span>) and Li et al. (<span>2023</span>). Yu et al. (<span>2023</span>) utilized a combination of cladistics, ABGD, jMOTU, bPTP, and morphologic methods to confirm the existence of nine <i>Ceriagrion</i> species in China. Their study also reported two synonyms, one new record, one distribution elimination, and three misidentifications. Li et al. (<span>2023</span>) reviewed <i>Rheotanytarsus guineensis</i> species group from","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/arch.22097","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140292617","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Eticha Abdisa, Hyunje Park, Jiyoon Kwon, Gahyeon Jin, Mojtaba Esmaeily, Yonggyun Kim
In Korea, there are two maggot species in the Delia genus that commonly infest the roots and stems of the Welsh onion, thus causing serious economic damage on the crop at the seedling stage. In this study, the seedcorn maggot (Delia platura) was detected in onion fields in two different localities in Korea. After overwintering, maggot infestations occurred throughout the entire growing seasons from transplantation to harvest, but their specific patterns of occurrence varied in the two localities examined. Entomopathogenic fungi induced significant virulence against the maggot larvae, in which a strain of Beauveria bassiana was effective, though it exhibited limited mortality in its insecticidal activity. To enhance this insecticidal activity, a culture broth from an entomopathogenic bacterium, Photorhabdus temperata temperata (Ptt), was added to B. bassiana treatment. The addition of Ptt broth significantly increased the insecticidal activity of B. bassiana in a dose-dependent manner. To elucidate this enhancement in insecticidal activity, the immunosuppressive activity of Ptt broth was assessed by identifying the immune responses of the seedcorn maggots. The seedcorn maggots possessed at least three different hemocytes with plasmatocytes, crystal cells, and lamellocytes. These hemocytes exhibited nodule formation in response to the fungal infection. In addition to the cellular immunity, the maggots exhibited inducible expressions of antimicrobial peptide (AMP) genes such as cecropin and defensin. The addition of Ptt broth suppressed the nodule formation and the AMP expressions in response to the fungal infection. Altogether, this study demonstrated the innate immune responses in a non-model insect, D. platura, along with the application of immunosuppression to develop a highly efficient biological control by enhancing the virulence of B. bassiana.
在韩国,Delia 属有两种蛆虫,它们通常侵染威尔士洋葱的根部和茎部,从而在苗期对作物造成严重的经济损失。本研究在韩国两个不同地区的洋葱田中发现了籽粒蛆(Delia platura)。越冬后,从移栽到收获的整个生长季节都会发生蛆害,但在考察的两个地方,蛆害发生的具体模式各不相同。昆虫病原真菌对蛆幼虫有明显的毒力,其中一种 Beauveria bassiana 菌株对蛆幼虫有效,但其杀虫活性的死亡率有限。为了增强这种杀虫活性,在 B. bassiana 处理中加入了昆虫病原菌 Photorhabdus temperata temperata(Ptt)的培养液。加入 Ptt 菌液后,B. bassiana 的杀虫活性明显提高,且呈剂量依赖性。为了阐明这种杀虫活性的增强,我们通过鉴定籽粒蛆的免疫反应来评估 Ptt 肉汤的免疫抑制活性。籽粒蛆至少有三种不同的血细胞,包括浆细胞、晶体细胞和片层细胞。这些血细胞在真菌感染后会形成结节。除细胞免疫外,蝇蛆还表现出抗菌肽(AMP)基因的诱导表达,如麦角素和防御素。添加 Ptt 肉汤可抑制真菌感染引起的结核形成和 AMP 表达。总之,这项研究证明了非模式昆虫 D. platura 的先天免疫反应,以及通过增强 B. bassiana 的毒力来开发高效生物防治的免疫抑制应用。
{"title":"Enhancement of an entomopathogenic fungal virulence against the seedcorn maggot, Delia platura, by suppressing immune responses with a bacterial culture broth of Photorhabdus temperata subsp. temperata","authors":"Eticha Abdisa, Hyunje Park, Jiyoon Kwon, Gahyeon Jin, Mojtaba Esmaeily, Yonggyun Kim","doi":"10.1002/arch.22103","DOIUrl":"10.1002/arch.22103","url":null,"abstract":"<p>In Korea, there are two maggot species in the <i>Delia</i> genus that commonly infest the roots and stems of the Welsh onion, thus causing serious economic damage on the crop at the seedling stage. In this study, the seedcorn maggot (<i>Delia platura</i>) was detected in onion fields in two different localities in Korea. After overwintering, maggot infestations occurred throughout the entire growing seasons from transplantation to harvest, but their specific patterns of occurrence varied in the two localities examined. Entomopathogenic fungi induced significant virulence against the maggot larvae, in which a strain of <i>Beauveria bassiana</i> was effective, though it exhibited limited mortality in its insecticidal activity. To enhance this insecticidal activity, a culture broth from an entomopathogenic bacterium, <i>Photorhabdus temperata temperata</i> (Ptt), was added to <i>B. bassiana</i> treatment. The addition of Ptt broth significantly increased the insecticidal activity of <i>B. bassiana</i> in a dose-dependent manner. To elucidate this enhancement in insecticidal activity, the immunosuppressive activity of Ptt broth was assessed by identifying the immune responses of the seedcorn maggots. The seedcorn maggots possessed at least three different hemocytes with plasmatocytes, crystal cells, and lamellocytes. These hemocytes exhibited nodule formation in response to the fungal infection. In addition to the cellular immunity, the maggots exhibited inducible expressions of antimicrobial peptide (AMP) genes such as <i>cecropin</i> and <i>defensin</i>. The addition of Ptt broth suppressed the nodule formation and the AMP expressions in response to the fungal infection. Altogether, this study demonstrated the innate immune responses in a non-model insect, <i>D. platura</i>, along with the application of immunosuppression to develop a highly efficient biological control by enhancing the virulence of <i>B. bassiana</i>.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140183590","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
As a common defense mechanism in Hymenoptera, bee venom has complex components. Systematic and comprehensive analysis of bee venom components can aid in early evaluation, accurate diagnosis, and protection of organ function in humans in cases of bee stings. To determine the differences in bee venom composition and metabolic pathways between Apis cerana and Apis mellifera, proton nuclear magnetic resonance (1H-NMR) technology was used to detect the metabolites in venom samples. A total of 74 metabolites were identified and structurally analyzed in the venom of A. cerana and A. mellifera. Differences in the composition and abundance of major components of bee venom from A. cerana and A. mellifera were mapped to four main metabolic pathways: valine, leucine and isoleucine biosynthesis; glycine, serine and threonine metabolism; alanine, aspartate and glutamate metabolism; and the tricarboxylic acid cycle. These findings indicated that the synthesis and metabolic activities of proteins or polypeptides in bee venom glands were different between A. cerana and A. mellifera. Pyruvate was highly activated in 3 selected metabolic pathways in A. mellifera, being much more dominant in A. mellifera venom than in A. cerana venom. These findings indicated that pyruvate in bee venom glands is involved in various life activities, such as biosynthesis and energy metabolism, by acting as a precursor substance or intermediate product.
作为膜翅目昆虫的一种常见防御机制,蜂毒成分复杂。对蜂毒成分进行系统、全面的分析,有助于对蜂蜇伤人体后的早期评估、准确诊断和保护人体器官功能。为了确定蜂毒成分和代谢途径在蜂类中的差异,研究人员采用质子核磁共振(1H-NMR)技术检测蜂毒样本中的代谢物。共鉴定和分析了两种蜂毒液中的 74 种代谢物。结果表明,蜂毒中主要成分的组成和丰度差异可归结为四个主要代谢途径:缬氨酸、亮氨酸和异亮氨酸的生物合成;甘氨酸、丝氨酸和苏氨酸的代谢;丙氨酸、天门冬氨酸和谷氨酸的代谢;以及三羧酸循环。这些研究结果表明,蜂毒腺中蛋白质或多肽的合成和代谢活动在 A. cerana 和 A. mellifera 之间存在差异。在蜜蜂毒液中,丙酮酸在 3 个选定的代谢途径中被高度激活,而且在蜜蜂毒液中比在 cerana 毒液中更占优势。这些研究结果表明,丙酮酸在蜜蜂毒腺中作为前体物质或中间产物,参与了生物合成和能量代谢等多种生命活动。
{"title":"1H-NMR revealed pyruvate as a differentially abundant metabolite in the venom glands of Apis cerana and Apis mellifera","authors":"Xing Zheng, Yanjun Liu, Rongshen Wang, Mingyang Geng, Jinliang Liu, Zhenxing Liu, Yazhou Zhao","doi":"10.1002/arch.22104","DOIUrl":"https://doi.org/10.1002/arch.22104","url":null,"abstract":"<p>As a common defense mechanism in Hymenoptera, bee venom has complex components. Systematic and comprehensive analysis of bee venom components can aid in early evaluation, accurate diagnosis, and protection of organ function in humans in cases of bee stings. To determine the differences in bee venom composition and metabolic pathways between <i>Apis cerana</i> and <i>Apis mellifera</i>, proton nuclear magnetic resonance (<sup>1</sup>H-NMR) technology was used to detect the metabolites in venom samples. A total of 74 metabolites were identified and structurally analyzed in the venom of <i>A. cerana</i> and <i>A. mellifera</i>. Differences in the composition and abundance of major components of bee venom from <i>A. cerana</i> and <i>A. mellifera</i> were mapped to four main metabolic pathways: valine, leucine and isoleucine biosynthesis; glycine, serine and threonine metabolism; alanine, aspartate and glutamate metabolism; and the tricarboxylic acid cycle. These findings indicated that the synthesis and metabolic activities of proteins or polypeptides in bee venom glands were different between <i>A. cerana</i> and <i>A. mellifera</i>. Pyruvate was highly activated in 3 selected metabolic pathways in <i>A. mellifera</i>, being much more dominant in <i>A. mellifera</i> venom than in <i>A. cerana</i> venom. These findings indicated that pyruvate in bee venom glands is involved in various life activities, such as biosynthesis and energy metabolism, by acting as a precursor substance or intermediate product.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140164424","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The structural cuticle proteins (CPs) play important roles in the development and fitness of insects. However, knowledge about CP gene superfamily is limited in virus-transmitting insect vectors, although its importance on transmission of plant virus has been gradually emphasized. In this study, the genome-wide identification of CP superfamily was conducted in western flower thrips Frankliniella occidentalis that is the globally invasive pest and plant virus vector pest. The pest transmits notorious tomato spotted wilt virus (TSWV) around the world, causing large damage to a wide array of plants. One hundred and twenty-eight F. occidentalis CP genes (FoCPs) were annotated in this study and they were classified into 10 distinct families, including 68 CPRs, 16 CPAP1s, 6 CPAP3s, 2 CPCFCs, 10 Tweedles, 4 CPFs, 16 CPLCPs, and 6 CPGs. The comprehensive analysis was performed including phylogenetic relationship, gene location and gene expression profiles during different development stages of F. occidentalis. Transcriptome analysis revealed more than 30% FoCPs were upregulated at least 1.5-fold when F. occidentalis was infected by TSWV, indicating their potential involvement in TSWV interactions. Our study provided an overview of F. occidentalis CP superfamily. The study gave a better understand of CP's role in development and virus transmission, which provided clues for reducing viral damages through silencing CP genes in insect vectors.
{"title":"Genome-wide identification of cuticle protein superfamily in Frankliniella occidentalis provide insight into the control of both insect vectors and plant virus","authors":"Yang Zheng, Yinghao Feng, Zhejin Li, Junwen Wang","doi":"10.1002/arch.22102","DOIUrl":"10.1002/arch.22102","url":null,"abstract":"<p>The structural cuticle proteins (CPs) play important roles in the development and fitness of insects. However, knowledge about CP gene superfamily is limited in virus-transmitting insect vectors, although its importance on transmission of plant virus has been gradually emphasized. In this study, the genome-wide identification of CP superfamily was conducted in western flower thrips <i>Frankliniella occidentalis</i> that is the globally invasive pest and plant virus vector pest. The pest transmits notorious tomato spotted wilt virus (TSWV) around the world, causing large damage to a wide array of plants. One hundred and twenty-eight <i>F. occidentalis</i> CP genes (<i>FoCP</i>s) were annotated in this study and they were classified into 10 distinct families, including 68 <i>CPR</i>s, 16 <i>CPAP1</i>s, 6 <i>CPAP3</i>s, 2 <i>CPCFC</i>s, 10 <i>Tweedle</i>s, 4 <i>CPF</i>s, 16 <i>CPLCP</i>s, and 6 <i>CPG</i>s. The comprehensive analysis was performed including phylogenetic relationship, gene location and gene expression profiles during different development stages of <i>F. occidentalis</i>. Transcriptome analysis revealed more than 30% <i>FoCP</i>s were upregulated at least 1.5-fold when <i>F. occidentalis</i> was infected by TSWV, indicating their potential involvement in TSWV interactions. Our study provided an overview of <i>F. occidentalis</i> CP superfamily. The study gave a better understand of CP's role in development and virus transmission, which provided clues for reducing viral damages through silencing CP genes in insect vectors.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140157445","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The microbial community structure plays an important role in the internal environment of brown planthopper (BPH), Nilaparvata lugens (Hemiptera: Delphacidae), which is an indispensable part to reflect the internal environment of BPH. Wing dimorphism is a strategy for balancing flight and reproduction of insects. Here, quantitative fluorescence PCR was used to analyse the number and changes of the symbionts in the fat body of long- and short-winged BPHs at different developmental stages. A metagenomic library was constructed based on the 16 S rRNA sequence and internal transcribed spacer sequence for high-throughput sequencing, to analyze the community structure and population number of the symbionts of long- and short-winged BPHs, and to make functional prediction. This study enriches the connotation of BPH symbionts, and laid a theoretical foundation for the subsequent study of BPH-symbionts interaction and the function of symbionts in the host.
微生物群落结构在褐跳蚤(BPH)Nilaparvata lugens(半翅目:Delphacidae)的体内环境中起着重要作用,是反映BPH体内环境不可缺少的一部分。翅膀二型是昆虫平衡飞行和繁殖的一种策略。本文利用荧光定量 PCR 分析了长翅和短翅 BPH 在不同发育阶段脂肪体中共生体的数量和变化。根据16 S rRNA序列和内部转录间隔序列构建元基因组文库,进行高通量测序,分析长翅和短翅双翅目昆虫共生体的群落结构和种群数量,并进行功能预测。该研究丰富了BPH共生体的内涵,为后续研究BPH-共生体相互作用及共生体在宿主体内的功能奠定了理论基础。
{"title":"Comparative analysis of the diversity of symbionts in fat body of long- and short-winged brown planthoppers","authors":"Linlin Fan, Guangxiang Guan, Jingjing Zhao, Danting Li, Xiaoping Yu, Xuping Shentu","doi":"10.1002/arch.22096","DOIUrl":"10.1002/arch.22096","url":null,"abstract":"<p>The microbial community structure plays an important role in the internal environment of brown planthopper (BPH), <i>Nilaparvata lugens</i> (Hemiptera: Delphacidae), which is an indispensable part to reflect the internal environment of BPH. Wing dimorphism is a strategy for balancing flight and reproduction of insects. Here, quantitative fluorescence PCR was used to analyse the number and changes of the symbionts in the fat body of long- and short-winged BPHs at different developmental stages. A metagenomic library was constructed based on the 16 S rRNA sequence and internal transcribed spacer sequence for high-throughput sequencing, to analyze the community structure and population number of the symbionts of long- and short-winged BPHs, and to make functional prediction. This study enriches the connotation of BPH symbionts, and laid a theoretical foundation for the subsequent study of BPH-symbionts interaction and the function of symbionts in the host.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140157465","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The CRISPR/Cas9 technology has greatly progressed research on non-model organisms, demonstrating successful applications in genome editing for various insects. However, its utilization in the case of the soybean looper, Chrysodeixis includens, a notable pest affecting soybean crops, has not been explored due to constraints such as limited genomic information and the embryonic microinjection technique. This study presents successful outcomes in generating heritable knockout mutants for a pigment transporter gene, scarlet, in C. includens through CRISPR/Cas9-mediated mutagenesis. The scarlet locus identified in the genome assembly of C. includens consists of 14 exons, with a coding sequence extending for 1,986 bp. Two single guide RNAs (sgRNAs) were designed to target the first exon of scarlet. Microinjection of these two sgRNAs along with the Cas9 protein into fresh embryos resulted in the successful production of variable phenotypes, particularly mutant eyes. The observed mutation rate accounted for about 16%. Genotype analysis revealed diverse indel mutations at the target site, presumably originating from double-strand breaks followed by the nonhomologous end joining repair, leading to a premature stop codon due to frame shift. Single-pair mating of the mutant moths produced G1 offspring, and the establishment of a homozygous mutant strain occurred in G2. The mutant moths exhibited lightly greenish or yellowish compound eyes in both sexes, confirming the involvement of scarlet in pigmentation in C. includens. Notably, the CRISPR/Cas9-mediated genome editing technique serves as a visible phenotypic marker, demonstrating its proof-of-concept applicability in C. includens, as other pigment transporter genes have been utilized as visible markers to establish genetic control for various insects. These results provide the first successful case that the CRISPR/Cas9 method effectively induces mutations in C. includes, an economically important soybean insect pest.
CRISPR/Cas9 技术极大地推动了对非模式生物的研究,成功应用于各种昆虫的基因组编辑。然而,由于基因组信息有限和胚胎显微注射技术等限制,该技术在影响大豆作物的著名害虫大豆环斑虫(Chrysodeixis includens)中的应用尚未得到探索。本研究介绍了通过 CRISPR/Cas9 介导的诱变,在 C. includens 中产生色素转运体基因 scarlet 遗传敲除突变体的成功结果。在 C. includens 的基因组组装中确定的猩红基因座由 14 个外显子组成,编码序列长达 1,986 bp。针对猩红的第一个外显子设计了两种单导核糖核酸(sgRNA)。将这两种 sgRNA 与 Cas9 蛋白一起显微注射到新鲜胚胎中,成功地产生了不同的表型,尤其是突变眼。观察到的突变率约为 16%。基因型分析表明,在目标位点上出现了多种嵌合突变,这些突变可能来自双链断裂后的非同源末端连接修复,从而导致因帧移位而过早出现终止密码子。突变蛾的单对交配产生了 G1 后代,并在 G2 中建立了同源突变株。突变蛾的雌雄复眼均呈淡绿色或淡黄色,证实了猩红参与了 C. includeens 的色素沉着。值得注意的是,CRISPR/Cas9 介导的基因组编辑技术可作为一种可见的表型标记,这证明了它在 C. includeens 中的概念验证适用性,因为其他色素转运体基因已被用作可见标记来建立各种昆虫的遗传控制。这些结果提供了第一个成功案例,说明 CRISPR/Cas9 方法能有效诱导包括 C. 在内的一种具有重要经济价值的大豆害虫发生突变。
{"title":"CRISPR/Cas9-mediated knockout of scarlet gene produces eye color mutants in the soybean looper, Chrysodeixis includens","authors":"Sujin Lee, Seung-Joon Ahn","doi":"10.1002/arch.22100","DOIUrl":"10.1002/arch.22100","url":null,"abstract":"<p>The CRISPR/Cas9 technology has greatly progressed research on non-model organisms, demonstrating successful applications in genome editing for various insects. However, its utilization in the case of the soybean looper, <i>Chrysodeixis includens</i>, a notable pest affecting soybean crops, has not been explored due to constraints such as limited genomic information and the embryonic microinjection technique. This study presents successful outcomes in generating heritable knockout mutants for a pigment transporter gene, <i>scarlet</i>, in <i>C. includens</i> through CRISPR/Cas9-mediated mutagenesis. The <i>scarlet</i> locus identified in the genome assembly of <i>C. includens</i> consists of 14 exons, with a coding sequence extending for 1,986 bp. Two single guide RNAs (sgRNAs) were designed to target the first exon of <i>scarlet</i>. Microinjection of these two sgRNAs along with the Cas9 protein into fresh embryos resulted in the successful production of variable phenotypes, particularly mutant eyes. The observed mutation rate accounted for about 16%. Genotype analysis revealed diverse indel mutations at the target site, presumably originating from double-strand breaks followed by the nonhomologous end joining repair, leading to a premature stop codon due to frame shift. Single-pair mating of the mutant moths produced G1 offspring, and the establishment of a homozygous mutant strain occurred in G2. The mutant moths exhibited lightly greenish or yellowish compound eyes in both sexes, confirming the involvement of <i>scarlet</i> in pigmentation in <i>C. includens</i>. Notably, the CRISPR/Cas9-mediated genome editing technique serves as a visible phenotypic marker, demonstrating its proof-of-concept applicability in <i>C. includens</i>, as other pigment transporter genes have been utilized as visible markers to establish genetic control for various insects. These results provide the first successful case that the CRISPR/Cas9 method effectively induces mutations in <i>C. includes</i>, an economically important soybean insect pest.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140157466","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Turgut Atay, Sait Ertürk, Mustafa Alkan, Şaban Kordali, Ferah Yılmaz, Aydemir Barış, Solmaz Ghanbari, Cansu Doğan, Umut Toprak
In the current study, we investigated the insecticidal efficacy of two borates, disodium octaborate tetrahydrate (Etidot-67) and calcium metaborate (CMB) via surface application or diet delivery on the red flour beetle, Tribolium castaneum (Herbst, 1797) (Coleoptera: Tenebrionidae). The application method did not change the boron-related mortality, but CMB was more effective than Etidot-67. At the highest dose, it took around 13 days to reach the highest mortality (≥98.1%) for CMB, while it was 19 days for Etidot-67 (≥95.8%). Both boron compounds led to a significant reduction in triglyceride levels in parallel to the downregulation of acetyl-CoA carboxylase (ACC) and fatty acid synthase (FAS), the two primary genes involved in de novo lipogenesis, while they also induced body weight loss. In conclusion, the current study indicated the insecticidal potential of boron compounds but CMB is more promising and more effective in controlling T. castaneum, while lipogenesis is inhibited and weight loss is induced by boron compounds.
{"title":"Boron compounds are effective on Tribolium castaneum (Coleoptera: Tenebrionidae): Reduced lipogenesis and induced body weight loss","authors":"Turgut Atay, Sait Ertürk, Mustafa Alkan, Şaban Kordali, Ferah Yılmaz, Aydemir Barış, Solmaz Ghanbari, Cansu Doğan, Umut Toprak","doi":"10.1002/arch.22098","DOIUrl":"10.1002/arch.22098","url":null,"abstract":"<p>In the current study, we investigated the insecticidal efficacy of two borates, disodium octaborate tetrahydrate (Etidot-67) and calcium metaborate (CMB) via surface application or diet delivery on the red flour beetle, <i>Tribolium castaneum</i> (Herbst, 1797) (Coleoptera: Tenebrionidae). The application method did not change the boron-related mortality, but CMB was more effective than Etidot-67. At the highest dose, it took around 13 days to reach the highest mortality (≥98.1%) for CMB, while it was 19 days for Etidot-67 (≥95.8%). Both boron compounds led to a significant reduction in triglyceride levels in parallel to the downregulation of acetyl-CoA carboxylase (<i>ACC</i>) and fatty acid synthase (<i>FAS</i>), the two primary genes involved in de novo lipogenesis, while they also induced body weight loss. In conclusion, the current study indicated the insecticidal potential of boron compounds but CMB is more promising and more effective in controlling <i>T. castaneum</i>, while lipogenesis is inhibited and weight loss is induced by boron compounds.</p>","PeriodicalId":8281,"journal":{"name":"Archives of Insect Biochemistry and Physiology","volume":"115 3","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/arch.22098","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140157464","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}