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Common-garden comparison of relative survival and fitness-related traits of wild, farm, and hybrid Atlantic salmon Salmo salar parr in nature 野生、养殖和杂交大西洋大马哈鱼在自然界的相对生存和健康相关性状的普通花园比较
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/aei00425
S. Crowley, I. Bradbury, A. Messmer, SJ Duffy, SS Islam, I. Fleming
: When escapee farmed Atlantic salmon Salmo salar interbreed with wild fish, the introgression of maladaptive genes can lower wild population productivity and alter key life his-tory traits. To date, only a few European studies have compared wild, farm, and hybrid salmon under common conditions in the wild, isolating the influence of genetics on survival and fitness-related traits. Here, we examined the performance of experimentally derived Atlantic salmon fry from 4 cross types (wild, farm, and reciprocal F 1 hybrids) during the first summer of growth at 3 locations in southern Newfoundland. Overall survival was high, with the cross type rank order consistent across sites (mean percent recaptured: wild-mother hybrids 26.2% ≈ wild 26.0% > farm 19.2% > farm-mother hybrids 12.8%). Wild fish were smaller than wild-mother hybrids and farm fish, though differed less in size from farm-mother hybrids. At 2 out of 3 sites, wild-mother hybrids were larger than wild and farm-mother hybrid fish but had only a small size advantage over farm fish. Shape differences were small and mainly related to body depth, with the largest differences between wild and farm fish. Wild-mother hybrids had fewer parr marks than other cross types at a single site, and though differences in the size of marks were minimal, farm fish tended to have the narrowest marks. Overall, these results show that genetic differences exist for fitness-related traits among wild, farm, and hybrid juveniles, even over short temporal scales and under favourable environmental conditions, and may contribute to patterns of reduced farm-mother hybrid and feral farm survival in the wild.
当人工养殖的大西洋大马哈鱼与野生鱼类杂交时,不适应基因的渗入会降低野生种群的生产力,并改变关键的生活史特征。迄今为止,只有少数欧洲研究比较了野生、养殖和杂交鲑鱼在野外的共同条件下,分离出基因对生存和健康相关特征的影响。在这里,我们在纽芬兰南部的3个地点研究了4种杂交类型(野生、养殖和互惠f1杂交)的大西洋鲑鱼鱼苗在生长的第一个夏天的表现。总体存活率高,不同地点的杂交类型排序一致(平均捕获率:野生母杂交26.2%≈野生26.0%,>农场19.2%,>农场-母亲杂交12.8%)。野生鱼比野生母杂交种和农场鱼小,尽管与农场母杂交种的大小差异较小。在3个地点中的2个,野生母杂交鱼比野生和农场母杂交鱼大,但只比农场鱼有很小的尺寸优势。形状差异很小,主要与身体深度有关,野生鱼和养殖鱼之间的差异最大。在同一地点,野生母杂交品种的配对标记比其他杂交品种的配对标记少,尽管标记大小的差异很小,但养殖鱼的标记往往最窄。总体而言,这些结果表明,即使在较短的时间尺度和有利的环境条件下,野生、农场和杂交幼鱼之间的适应性相关性状存在遗传差异,并可能导致野生农场-母亲杂交和野生农场生存减少的模式。
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引用次数: 2
Aquaculture and eelgrass Zostera marina interactions in temperate ecosystems 温带生态系统中水产养殖与大叶藻的相互作用
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/aei00426
LM Howarth, LM Lewis-McCrea, L. Kellogg, ET Apostolaki, GK Reid
This paper reviews the impacts of shellfish and finfish aquaculture on eelgrass Zostera marina, the most widely distributed seagrass species in the northern hemisphere. Shellfish aquaculture can have positive, neutral, and negative effects on eelgrass. Positive interactions can be generated by the filtering activity of cultured bivalves, which may improve water quality and reduce epiphyte loads, and shellfish biodeposits may provide more nutrients to eelgrass and other vegetation. However, negative responses are more commonly reported and can be caused by shading and sedimentation. These negative effects tend to occur directly under and immediately surrounding shellfish farms and rapidly diminish with increasing distance. In contrast to shellfish aquaculture, only one field study has investigated the effects of finfish aquaculture on eelgrass in a temperate setting, and the results were inconclusive. However, many studies have investigated the effects of Mediterranean finfish farms on 2 other species of seagrass (Posidonia oceanica and Cymodocea nodosa). These studies reported clear negative interactions, which have been linked to increased nutrient concentrations, sulphides, sedimentation, epiphyte loads, and grazing pressure. It is unknown if these studies are relevant for finfish aquaculture in temperate regions due to differences in environmental conditions, and because the studies focused on different species of seagrass. Thus, further study in a temperate setting is warranted. We conclude by highlighting key research gaps that could help regulators establish unambiguous operational and siting guidelines that minimize the potential for negative interactions between aquaculture and eelgrass.
本文综述了北半球分布最广泛的海草——大叶藻(Zostera marina)的养殖对贝类和鳍鱼的影响。贝类养殖对大叶藻有积极、中性和消极的影响。养殖双壳类的过滤作用可以产生正相互作用,这可能改善水质并减少附生菌负荷,贝类生物沉积物可能为大叶藻和其他植被提供更多的营养。然而,负面反应更常被报道,可能是由遮阳和沉积引起的。这些负面影响往往发生在贝类养殖场的正下方和周围,并随着距离的增加而迅速减少。与贝类养殖相比,只有一项实地研究调查了温带环境下鳍鱼养殖对鳗草的影响,结果不确定。然而,许多研究调查了地中海鱼类养殖场对另外两种海草(Posidonia oceanica和Cymodocea nodosa)的影响。这些研究报告了明显的负相互作用,这与营养物质浓度、硫化物、沉积、附生菌负荷和放牧压力的增加有关。由于环境条件的差异,这些研究是否与温带地区的有鳍鱼养殖有关尚不清楚,因为研究的重点是不同种类的海草。因此,在温带环境下进行进一步的研究是必要的。最后,我们强调了关键的研究空白,这些空白可以帮助监管机构建立明确的操作和选址指南,以最大限度地减少水产养殖与大鳗草之间潜在的负面相互作用。
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引用次数: 4
Validation of a sea lice dispersal model: principles from ecological agent-based models applied to aquatic epidemiology 海虱扩散模型的验证:应用于水生流行病学的基于生态主体的模型的原理
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/aei00390
D. Cantrell, R. Vanderstichel, R. Filgueira, J. Grant, C. Revie
Sea lice are one of the most economically costly and ecologically concerning problems facing the salmon farming industry. Here, we validated a coupled biological and physical model that simulated sea lice larvae dispersal from salmon farms in the Broughton Archipelago (BA), British Columbia, Canada. We employed a concept from ecological agent-based modeling known as ‘pattern matching’, which identifies similar emergent properties in both the simulated and observed data to confirm that the simulation contained sufficient complexity to recreate the emergent properties of the system. One emergent property from the biophysical simulations was the existence of sub-networks of farms. These were also identified in the observed sea lice count data in this study using a space-time scan statistic (SaTScan) to identify significant spatio-temporal clusters of farms. Despite finding support for our simulation in the observed data, which consisted of over a decade’s worth of monthly sea lice abundance counts from salmon farms in the BA, the validation was not entirely straightforward. The complexities associated with validating this biophysical dispersal simulation highlight the need to further develop validation techniques for agent-based models in general, and biophysical simulations in particular, which often result in patchiness in their dispersal fields. The methods utilised in this validation could be adopted as a template for other epidemiological dispersal models, particularly those related to aquaculture, which typically have robust disease monitoring data collection plans in place.
海虱是三文鱼养殖业面临的经济成本和生态问题之一。在这里,我们验证了一个耦合的生物和物理模型,该模型模拟了加拿大不列颠哥伦比亚省布劳顿群岛(BA)鲑鱼养殖场的海虱幼虫扩散。我们采用了一种基于生态主体的建模概念,称为“模式匹配”,它在模拟和观察数据中识别出相似的紧急属性,以确认模拟包含足够的复杂性来重建系统的紧急属性。生物物理模拟的一个新特性是农场子网络的存在。本研究还利用时空扫描统计(SaTScan)在观察到的海虱计数数据中确定了这些数据,以确定重要的时空农场集群。尽管在观察到的数据中发现了对我们模拟的支持,这些数据包括十多年来英国大湾区鲑鱼养殖场每月海虱数量的统计,但验证并不完全直截了当。验证这种生物物理扩散模拟的复杂性突出了进一步开发基于主体的模型的验证技术的必要性,特别是生物物理模拟,这通常会导致其扩散领域的斑块。该验证中使用的方法可以作为其他流行病学传播模型的模板,特别是与水产养殖有关的模型,这些模型通常具有健全的疾病监测数据收集计划。
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引用次数: 5
Impact of salmon farming on Atlantic cod spatio-temporal reproductive dynamics 鲑鱼养殖对大西洋鳕鱼时空繁殖动态的影响
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/aei00415
J. Skjæraasen, Ø. Karlsen, Ø. Langangen, Tv der Meeren, NR Keeley, M. Myksvoll, G. Dahle, E. Moland, R. Nilsen, KM Elvik Schrøder, R. Bannister, E. Olsen
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引用次数: 2
Validating a biophysical parasite model with fish farm pen and plankton trawl data 利用渔场围栏和浮游生物拖网数据验证生物物理寄生虫模型
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/aei00416
TP Adams, S. Marshall, S. Brown, K. Black
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引用次数: 1
Elevated temperatures increase growth and enhance foraging performances of a marine gastropod 升高的温度促进了海洋腹足动物的生长和觅食性能
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/AEI00398
N. Hu, Z. Yu, Y. Huang, D. Liu, Feng Wang, T. Zhang
The oceans continue to warm due to rising atmospheric greenhouse gas concentrations. Most climate-change studies of aquaculture species use temperature changes based on coarseresolution climate models and without considering thermal ranges of an animal. Coarse-resolution climate models are generated by global-scale data, which is insufficient to capture the conditions of coastal areas where most aquaculture activity occurs. Therefore, ocean warming research on coastal organisms requires a more comprehensive design to include broad temperature gradients. By using the ecologically and commercially important coastal whelk Rapana venosa, we combined long-term and short-term experiments and selected 4 temperature treatments (19, 23, 27, and 30°C) to simulate different scenarios to test ocean warming effects on growth rates and foraging performances of whelks. We found that elevated temperature within the whelk’s thermal range (23 and 27°C) significantly increased growth rates and enhanced foraging performances of marine whelks when compared to the current temperature (19°C). Conversely, the whelk’s performance collapsed at 30°C in terms of both growth and foraging behavior. Our research clearly shows that local conditions and the tolerance range of a species must be considered to develop meaningful information for testing the effects of a changing climate. Our study suggests that rapa whelks may increase their feeding and reach larger sizes during warmer periods. Moreover, our study may provide a foundation for future climate research on aquaculture species.
由于大气中温室气体浓度的上升,海洋继续变暖。大多数关于水产养殖物种的气候变化研究使用基于粗分辨率气候模型的温度变化,而没有考虑动物的温度范围。粗分辨率气候模型是由全球尺度数据生成的,这不足以捕捉大多数水产养殖活动发生的沿海地区的情况。因此,对沿海生物的海洋变暖研究需要更全面的设计,以包括广泛的温度梯度。以具有重要生态价值和商业价值的海岸海螺(Rapana venosa)为研究对象,选取19、23、27和30°C 4种温度处理,采用长期与短期相结合的实验方法,模拟不同温度条件下海洋变暖对海螺生长速率和觅食性能的影响。我们发现,与当前温度(19°C)相比,在海螺的温度范围内(23°C和27°C)升高的温度显著提高了海螺的生长速度和觅食性能。相反,在30°C时,海螺的生长和觅食行为都崩溃了。我们的研究清楚地表明,必须考虑当地条件和物种的耐受范围,才能为测试气候变化的影响提供有意义的信息。我们的研究表明,在温暖的时期,rapa海螺可能会增加它们的摄取量,并变得更大。此外,本研究可为今后水产养殖物种的气候研究提供基础。
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引用次数: 2
Reduced physiological performance in a free-living coralline alga induced by salmon faeces deposition 三文鱼粪便沉积导致自由生活珊瑚藻生理性能下降
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/AEI00403
E. Legrand, T. Kutti, EV Gonzalez Casal, Sps Rastrick, S. Andersen, V. Husa
Maerl beds are formed by the accumulation of free-living coralline algae and have considerable ecological significance due to the high diversity of associated fauna and flora. The rapid expansion of the Atlantic salmon Salmo salar aquaculture industry in Norway may have major impacts on surrounding maerl beds through the release of effluents, including fish faeces. This study is the first to test the effects of salmon faeces and inorganic sediment deposition on the photosynthesis, respiration, calcification and pigment content of the coralline alga Lithothamnion soriferum. In a 6 wk laboratory experiment, inorganic sediment and salmon faeces deposition significantly reduced the amount of light reaching the surface of coral line algae. No impact of inorganic sediment deposition was detected on L. soriferum physiology, while salmon faeces deposition increased respiration rate and reduced net primary production and calcification. The accumulation of salmon faeces stimulates proliferation of bacteria, with adverse consequences on L. soriferum physiology due to the potential release of toxic compounds. Burial by salmon faeces deposition also affects the physiology of coralline algae due to the flocculation of sticky faeces particles, which may limit nutrient and gas exchanges in the vicinity of thalli. Carbon dioxide accumulation in the vicinity of L. soriferum may lead to a decline in pH and alter the calcification process in cell walls. In natural maerl beds, the negative effect of faeces deposition may be exacerbated by longer-term exposure and the presence of other chemicals released by fish farms.
珊瑚床是由自由生活的珊瑚藻聚集形成的,由于其伴生动植物的高度多样性,具有相当大的生态意义。挪威大西洋大马哈鱼(Salmo salar)水产养殖业的迅速扩张,可能会释放出包括鱼粪在内的污水,对周围的沼泽床产生重大影响。本研究首次测试了鲑鱼粪便和无机沉积物沉积对珊瑚藻(Lithothamnion soriferum)光合作用、呼吸作用、钙化和色素含量的影响。在一项为期6周的实验室实验中,无机沉积物和鲑鱼粪便的沉积显著减少了到达珊瑚线藻类表面的光量。无机沉积物沉积对L. soriferum生理无影响,而鲑鱼粪便沉积增加了L. soriferum呼吸速率,降低了净初级产量和钙化。鲑鱼粪便的积累刺激了细菌的增殖,由于潜在的有毒化合物的释放,对L. soriferum生理产生不利影响。鲑鱼粪便沉积掩埋也会影响珊瑚藻的生理,因为粘性粪便颗粒会发生絮凝,这可能限制菌体附近的营养物质和气体交换。二氧化碳在乳酸菌附近的积累可能导致pH值下降,并改变细胞壁的钙化过程。在天然粪池中,粪便沉积的负面影响可能会因长期接触和养鱼场释放的其他化学物质而加剧。
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引用次数: 3
Intestinal microbial diversity and functional analysis of Urechis unicinctus from two different habitats: pond polycultured with Penaeus japonicus and coastal zone 两种不同生境:与日本对虾混养的池塘和海岸带独尾尿鲈肠道微生物多样性及功能分析
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/AEI00395
Y. Tang, S. Ma, Y. Liu, Y. Pi, Y. Zhao
Urechis unicinctus is an important commercial and ecological invertebrate that has potential applications in the study of marine invertebrate evolution and marine pharmaceutical development. Here we analyzed the intestinal microbial diversity of U. unicinctus from 2 different habitats using 16S rDNA 454 high-throughput sequencing. The dominant phyla were Proteo bacteria, Bacterioidetes, Firmicutes, and Actinobacteria in gut samples of U. unicinctus, which significantly differed from those in its 2 habitats (i.e. intertidal mudflat and pond polyculture). Exceptions were Proteobacteria, Firmicutes and Bacterioidetes, which were the dominant phyla in the sediment and water samples. The top 15 genera in the gut samples did not show any significant differences between the 2 habitats. Functional analysis of the intestinal microbial community showed that metabolism, including carbohydrate and amino acid metabolism, was the most important function. Methane metabolism was one of the main components of energy metabolism. The gut microbes also played an important role in environmental and genetic information processing, cellular processes, etc. These findings provide an understanding of gut microbiome composition and diversity in U. unicinctus from 2 different habitats. Our results can inform the management of animal health in U. unicinctus farming activities and further gut microecology research.
unicuctus是一种重要的商业和生态无脊椎动物,在海洋无脊椎动物进化研究和海洋药物开发方面具有潜在的应用价值。本研究采用16S rDNA 454高通量测序技术,分析了2种不同生境的独形乌蚊肠道微生物多样性。独角假单胞菌肠道样品的优势菌门为蛋白质门、拟杆菌门、厚壁菌门和放线菌门,与潮间带滩涂和池塘混养区差异显著。例外的是变形菌门、厚壁菌门和拟杆菌门,它们是沉积物和水样中的优势门。肠道样品中前15个属在两个栖息地之间没有显着差异。肠道微生物群落的功能分析表明,代谢(包括碳水化合物和氨基酸代谢)是最重要的功能。甲烷代谢是能量代谢的主要组成部分之一。肠道微生物在环境和遗传信息处理、细胞过程等方面也发挥着重要作用。这些发现提供了对2种不同栖息地的独形美国人肠道微生物组成和多样性的理解。我们的研究结果可以为unicucus养殖活动中的动物健康管理和进一步的肠道微生态研究提供信息。
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引用次数: 1
Salmon lice nauplii and copepodids display different vertical migration patterns in response to light 鲑鱼虱和桡足类在光照条件下表现出不同的垂直迁移模式
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/AEI00396
A. Szetey, D. W. Wright, F. Oppedal, T. Dempster
Light is a fundamental environmental cue which influences the migration of many marine organisms. For the salmon louse Lepeophtheirus salmonis, light is believed to drive the diel vertical migration behaviour of their planktonic larvae. Salmon lice are of critical importance to the salmonid industry due to the damage they cause to wild and farmed hosts. Salmon lice larvae have an eyespot and are positively phototactic, yet how light intensity alters their vertical distribution remains unclear. Here, we tested how light intensity (0, 0.5, 10 and 80 μmol m−2 s−1), dispersal duration (1, 4 and 12 h) and release point (surface or bottom) influenced the vertical migration of salmon lice nauplii and copepodids under controlled conditions in experimental columns. Overall, higher light intensity increased the proportion of nauplii that aggregated at the surface. Copepodid behaviour differed from that of nauplii, as they swam upwards in both light and fully dark conditions, and surface aggregations increased with dispersal duration. Results from the experiments did not support the existing view that light strongly influences the vertical position of copepodids in the water column. Combined with previous work, our results reveal that salmon lice larval stages display different vertical responses to light, temperature and salinity, which may be explained by the different strategies of nauplii (maximise survival and dispersal) and copepodids (maximise host-finding success). Our results have implications for salmon lice dispersal models, where re sponses of copepodids and nauplii to light are currently parametrised by the same equations. Implementing stage-specific behaviours towards light may improve the outputs of dispersal models.
光是影响许多海洋生物迁移的基本环境线索。对于鲑鱼虱来说,光被认为会驱动它们浮游幼虫的垂直迁移行为。鲑鱼虱对鲑鱼产业至关重要,因为它们会对野生和养殖宿主造成损害。鲑鱼虱幼虫有一个眼点,并且正趋光,但光强度如何改变它们的垂直分布仍不清楚。在实验柱上,我们测试了光照强度(0、0.5、10和80 μmol m−2 s−1)、扩散时间(1、4和12 h)和释放点(表面或底部)在受控条件下对鲑鱼虱和桡足类垂直迁移的影响。总体而言,较高的光强增加了表面聚集的nauplii比例。桡足类的行为与鹦鹉螺不同,它们在光照和完全黑暗的条件下都向上游动,并且随着分散时间的延长,表面聚集量增加。实验结果不支持现有的观点,即光强烈影响桡足类在水柱中的垂直位置。结合之前的工作,我们的研究结果表明,鲑鱼虱幼虫阶段对光、温度和盐度表现出不同的垂直反应,这可能是由nauplii(最大限度地生存和扩散)和桡足类(最大限度地寻找宿主)的不同策略所解释的。我们的结果对鲑鱼虱扩散模型有启示,其中桡足类和nauplii对光的反应目前由相同的方程参数化。实现针对光的阶段特定行为可以改善扩散模型的输出。
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引用次数: 4
What is the limit of sustained swimming in Atlantic salmon post smolts? 在大西洋鲑鱼幼崽中持续游泳的极限是多少?
IF 2.2 2区 农林科学 Q2 FISHERIES Pub Date : 2021-01-01 DOI: 10.3354/AEI00401
M. Hvas, O. Folkedal, F. Oppedal
A trend in Atlantic salmon aquaculture is to establish new production sites that are susceptible to extreme weather conditions; however, strong and persistent water currents may compromise fish welfare. Defining acceptable current conditions necessitates an assessment of sustained swimming abilities that are fuelled solely by aerobic metabolism and do not result in fatigue. In this study, the limit of sustained swimming was quantified with regards to both speed and time in Atlantic salmon of ~700 g and ~39 cm at 12°C by testing fish in groups of 10 in a large swim tunnel respirometer. First, critical swimming speed (Ucrit) (107 cm s−1) and minimum cost of transport (66 cm s−1) were measured. Sustained swimming trials at constant speeds were then performed based on a percentage of the group mean Ucrit (80, 85, 90, 95, 100 or 105%). Fish were forced to swim until they fatigued or until 72 h had passed. Surprisingly, most fish were able to sustain 80 and 85% Ucrit for 72 consecutive hours. However, at the highest speeds, fatigue was reached within the first 2 h. By categorizing fatigue times of individual fish into <2, 2−72 or >72 h, significant differences in relative swimming speeds were found that corresponded to 2.7, 2.5 and 2.2 body lengths s−1, respectively. These results document impressive sustained swimming capacities in farmed Atlantic salmon and add important temporal insights about ambient current limits with regards to fish welfare at exposed aquaculture sites.
大西洋鲑鱼水产养殖的一个趋势是建立易受极端天气条件影响的新生产地;然而,强烈和持续的水流可能会损害鱼类的福利。定义可接受的当前条件需要评估仅由有氧代谢提供能量且不会导致疲劳的持续游泳能力。在这项研究中,通过在大型游泳隧道呼吸计中以10条鱼为一组进行测试,对~700 g和~39 cm的大西洋鲑鱼在12°C下持续游泳的速度和时间进行了量化。首先,测量临界游泳速度(Ucrit) (107 cm s - 1)和最小运输成本(66 cm s - 1)。然后根据组平均Ucrit的百分比(80、85、90、95、100或105%)进行恒定速度的持续游泳试验。鱼被迫游到疲劳或72小时过去。令人惊讶的是,大多数鱼能够连续72小时维持80%到85%的温度。然而,在最高速度下,在前2小时内就会达到疲劳。通过将个体鱼的疲劳时间划分为72小时,发现相对游泳速度分别对应2.7、2.5和2.2体长s−1。这些结果记录了养殖大西洋鲑鱼令人印象深刻的持续游泳能力,并对暴露的水产养殖场的鱼类福利的环境电流限制提供了重要的时间见解。
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引用次数: 7
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Aquaculture Environment Interactions
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