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First report of highly pathogenic Cladosporium colombiae isolates on durum wheat plant in Algeria 阿尔及利亚硬粒小麦株高致病性哥伦比亚枝孢菌分离株首次报道
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-07-01 DOI: 10.1007/s13313-025-01062-1
Gharzouli Asma, Bencheikh Amor, Sadrati Nouari, Daichi Barkahoum Meriem, Rouag Noureddine

The isolation of Phytopathogens from durum wheat grains obtained from twenty-eight locations in northeastern Algeria revealed the presence of two Cladosporium isolates in Algerian durum wheat seeds. A macro- and microscopic study was performed to identify these isolates, and the obtained result was confirmed by Molecular identification. Two tests were conducted on three durum wheat varieties to evaluate their pathogenicity on coleoptile and root length, as well as the basal parts. The results revealed that Cladosporium isolates caused a significant decrease in the coleoptile and root length, reaching 100%, and a diminution in the root and shoot length by 29.61% and 49.78%, respectively. It also caused a diminution in root and shoot fresh weight by 88.76% and 56.87%, respectively. Based on all these results, it is the first report of highly pathogenic isolates of Cladosporium colombiae on durum wheat plant in Algeria.

从阿尔及利亚东北部28个地点的硬粒小麦籽粒中分离出植物病原体,发现在阿尔及利亚硬粒小麦种子中存在两个枝孢子菌分离株。对分离菌株进行了宏观和微观的鉴定,并进行了分子鉴定。以3个硬粒小麦品种为试验材料,对其胚芽鞘、根长和基部的致病性进行了评价。结果表明,枝孢菌分离株使芽鞘和根长度显著减少,分别减少29.61%和49.78%。根系鲜重和地上部鲜重分别减少了88.76%和56.87%。这是阿尔及利亚首次在硬粒小麦上发现哥伦比亚枝孢菌高致病性分离株。
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引用次数: 0
First report of Colletotrichum species causing chili (Capsicum annuum L.) anthracnose in Hue, Vietnam 越南顺化地区引起辣椒炭疽病的炭疽菌属首次报道
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-06-23 DOI: 10.1007/s13313-025-01060-3
Nguyen Thi Thuy Tien, Le Thi Ha Thanh, Nguyen Thi Kim Thi, Phung Thi Bich Hoa, Nguyen Quang Duc Tien, Nguyen Hoang Loc

Anthracnose is one of the causes of significant reductions in chili yield and marketability worldwide. In Vietnam, anthracnose is also one of the most dangerous diseases of chili. This work aimed to identify Colletotrichum species causing chili anthracnose in Hue based on phylogenetic analysis of multiple locus genes such as ITS, act, cal, chs-1, gapdh, and tub2. The study determined 3 species of Colletotrichum, which were C. scovillei, C. truncatum, and C. siamense. Furthermore, the morphological features of these species were determined. The pathogenicity assays revealed that these species displayed different levels of virulence on artificially infected fruits such as chili, banana, mango, and dragon fruit. The incidence and lesion size of anthracnose disease in wounded fruits were higher than in unwounded fruits. Notably, the pathogenicity of C. truncatum on banana has not been previously reported and it. warns the banana industry that anthracnose caused by this species may appear on this fruit crop. Our study provides preliminary insights into the Colletotrichum species associated with chili anthracnose, which will assist in developing biocontrol strategies and managing post-harvest diseases that impact chili production in Vietnam.

炭疽病是全球辣椒产量和适销性显著下降的原因之一。在越南,炭疽病也是辣椒最危险的疾病之一。本文旨在通过ITS、act、cal、chs-1、gapdh和tub2等多位点基因的系统发育分析,确定顺化辣椒炭疽病的病原菌种类。本研究共鉴定出炭疽菌3种,分别为C. scovillei、C. truncatum和C. siamense。此外,还测定了这些物种的形态特征。对人工侵染的辣椒、香蕉、芒果、火龙果等水果均表现出不同程度的毒力。伤果炭疽病发病率和病斑大小均高于未伤果。值得注意的是,该菌对香蕉的致病性尚未见报道。警告香蕉行业,由该物种引起的炭疽病可能出现在这种水果作物上。我们的研究提供了与辣椒炭疽病相关的炭疽菌种类的初步见解,这将有助于制定生物防治策略和管理影响越南辣椒生产的收获后疾病。
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引用次数: 0
Evaluating antofine's dual effects: Controlling Sclerospora graminicola infection while improving physiological performance and yield in foxtail millet 评价安托芬对谷子生理性能和产量的双重影响:控制谷粒核孢子菌感染
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-06-19 DOI: 10.1007/s13313-025-01059-w
Xin Gui, Jiaojiao Lu, Mei Wang, Yanbo Huo, Jing Wang, Mingqing Liu, Zhijun Zhang

Sclerospora graminicola, a destructive oomycete pathogen, is the causal agent of downy mildew in foxtail millet (Setaria italica L.), a devastating disease that severely impacts crop productivity. Antofine, an alkaloid isolated from Cynanchum komarovii Al. Iljinski, exhibits significant inhibitory effects on S. graminicola. This study evaluated the effects of 2% antofine suspension (applied via seed coating) on physiological traits, nutritional quality, and yield in foxtail millet. The results revealed that 2% antofine treatment significantly enhanced plant growth parameters, including plant height, total root length, and root-shoot ratio during both seedling and jointing stages. The enzymatic analysis revealed that 2% antofine treatment induced peak activity of key defense-related enzymes at the elongation stage, with catalase (CAT), peroxidase (POD), superoxide dismutase (SOD), and phenylalanine ammonia-lyase (PAL) showing significant increases of 11.06%, 34.70%, 345.67%, and 8.68%, respectively, compared to the control. Field trials demonstrated a 66.81% disease control efficacy, accompanied by a 22.01% yield increase (4245.58 kg/ha). Notably, antofine application significantly improved grain quality, elevating total sugar (8.26%), soluble sugar (67.32%), yellow pigment (12.04%), vitamin C (46.29%) and crude protein (30.64%) contents. These results collectively indicate that antofine functions as a multifunctional agent that not only suppresses S. graminicola infection but also activates plant defense mechanisms, enhances stress tolerance, and improves crop productivity and nutritional value. The study provides compelling evidence for antofine's dual role as both an effective biocontrol agent and a plant growth regulator in foxtail millet cultivation systems.

谷粒霜霉病是一种破坏性的卵菌病原体,是谷子霜霉病的致病因子,是一种严重影响作物生产力的破坏性疾病。安托芬是一种从金钱菊中分离得到的生物碱,对谷草球菌有明显的抑制作用。本试验研究了2%安托芬悬浮液(通过种包衣施用)对谷子生理性状、营养品质和产量的影响。结果表明,2%的安托芬处理显著提高了苗期和拔节期植株的生长参数,包括株高、总根长和根冠比。酶学分析表明,2%安托芬处理在伸长期诱导关键防御相关酶活性达到峰值,过氧化氢酶(CAT)、过氧化物酶(POD)、超氧化物歧化酶(SOD)和苯丙氨酸解氨酶(PAL)活性分别较对照显著提高11.06%、34.70%、345.67%和8.68%。田间试验表明,防治效果为66.81%,增产22.01%(4245.58公斤/公顷)。施用antofine显著改善了籽粒品质,提高了籽粒总糖(8.26%)、可溶性糖(67.32%)、黄色素(12.04%)、维生素C(46.29%)和粗蛋白质(30.64%)含量。综上所述,安托芬作为一种多功能制剂,不仅具有抑制稻瘟病的作用,还具有激活植物防御机制、增强抗逆性、提高作物产量和营养价值的作用。本研究为安托芬在谷子栽培系统中作为有效的生物防治剂和植物生长调节剂的双重作用提供了强有力的证据。
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引用次数: 0
Molecular characterization of Neopestalotiopsis spp. (grey leaf spot disease) on Persea bombycine hook (Som plant) in Assam, India 印度阿萨姆邦Persea bombyine hook (Som植物)上Neopestalotiopsis spp.(灰叶斑病)的分子特征
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-06-17 DOI: 10.1007/s13313-025-01045-2
Bhrigupoti Hazarika, Nilutpal Saikia, Ajit K. Tamuli, Palash Debnath

Northeast India, particularly Assam, is a significant region for sericulture, home to the renowned Muga silkworms (Antheraea assamensis Helfer) that produce golden-hued silk. The primary feeding plants for these silkworms are Som (Persea bombycine King ex Hook. Fil. Kosterm) and Soalu (Litsea monopetala Juss). However, these plants are susceptible to diseases, including grey leaf spot, which affect leaf quality and silkworm productivity. This study aimed to identify the pathogen causing grey leaf spot on Som plants. Diseased leaf samples were collected from various locations in Assam, and fungal isolates were designated and analyzed using PCR with ITS-1 and ITS − 4 primers. The isolate BP2, identified through sequence analysis and BLAST®, showed the highest homology (92.6%) with Neopestalotiopsis spp. strain NTUCC (accession number MT322112). The results were submitted, and the accession number OQ195903 was assigned by NCBI. Pathogenicity tests also confirm the pathogenic effect of the test isolate BP2. This study provides crucial insights into the pathogen responsible for grey leaf spot, aiding in developing management strategies for sericulture sustainability.

印度东北部,特别是阿萨姆邦,是一个重要的养蚕地区,是著名的穆加蚕(Antheraea assamensis Helfer)的故乡,它能产出金黄色的丝绸。这些蚕的主要取食植物是桑蚕(Persea bombycine King ex Hook)。费尔。Kosterm)和Soalu (Litsea monopetala Juss)。然而,这些植物易患包括灰斑病在内的疾病,影响叶片质量和蚕的产量。本研究旨在鉴定引起索姆植物灰斑病的病原菌。在阿萨姆邦的不同地点收集了病叶样本,并使用ITS-1和ITS- 4引物进行了真菌分离和PCR分析。通过序列分析和BLAST®鉴定,分离物BP2与Neopestalotiopsis spp. strain NTUCC (accession number MT322112)同源性最高(92.6%)。结果已提交,登录号为OQ195903,由NCBI分配。致病性试验也证实了试验分离物BP2的致病作用。本研究为了解造成灰叶斑病的病原菌提供了重要的见解,有助于制定蚕桑可持续发展的管理策略。
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引用次数: 0
Methods for quantifying low populations of root-knot nematode (Meloidogyne spp.) in vegetable soils and their potential for use in monitoring programs to improve nematode management decisions 蔬菜土壤中根结线虫(Meloidogyne spp.)低种群的量化方法及其在监测项目中用于改善线虫管理决策的潜力
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-06-17 DOI: 10.1007/s13313-025-01058-x
Graham Roy Stirling, Neil L. Wilson, Jennifer A. Cobon, Wayne T. O’Neill

Most Australian vegetable growers apply fumigants or nematicides as a precautionary nematode control measure when crops susceptible to root-knot nematode (RKN, Meloidogyne spp.) are grown in soils and environmental conditions suitable for the nematode. The only way growers can make rational decisions on whether these expensive and environmentally disruptive chemicals are required is to regularly monitor RKN populations and decide whether numbers prior to planting are high enough to cause economic damage. However, such monitoring programs are difficult to implement because nematode quantification methods vary in efficiency and the damage threshold for RKN on highly susceptible vegetable crops is often < 10 root-knot nematodes /200 mL soil. Consequently, five nematode quantification methods were tested to see whether they could reliably detect these very low population densities of RKN. Two novel methods produced consistent results: 1) extracting nematodes from 2 L soil samples using Whitehead trays, quantifying the RKN DNA in the nematode suspension using molecular methods, and generating a standard curve so that the molecular results provided an estimate of the total number of RKN individuals in the sample, and 2) a bioassay in which two tomato seedlings were planted in pots containing 2 L soil and the number of galls produced on roots were counted after 21–25 days. Both methods could be used to quantify low populations of RKN, but bioassays are more practical because expensive equipment and facilities are not required and they can be done at a local level by people lacking nematological or molecular skills.

当作物易受根结线虫(RKN, Meloidogyne spp.)感染时,大多数澳大利亚蔬菜种植者使用熏蒸剂或杀线虫剂作为预防线虫控制措施,这些作物生长在适合线虫生长的土壤和环境条件下。对于是否需要使用这些昂贵且破坏环境的化学品,种植者能够做出理性决定的唯一方法是定期监测RKN的数量,并确定种植前的RKN数量是否高到足以造成经济损失。然而,由于线虫量化方法的效率各不相同,并且RKN对高易感蔬菜作物的危害阈值通常为10根结线虫/200 mL土壤,因此此类监测方案难以实施。因此,测试了五种线虫量化方法,以确定它们是否能够可靠地检测这些非常低的RKN种群密度。两个新方法产生一致的结果:1)从2 L土壤样本中提取线虫使用怀特黑德托盘,量化RKN DNA线虫悬挂使用分子方法,并生成一个标准曲线,这样的分子总数的结果提供了一个估计RKN个体样本,和2)生物测定中包含2 L两个番茄幼苗栽在盆土和根五倍子生产的数量是21 - 25日天后统计。这两种方法都可以用来量化RKN的低种群,但是生物测定更实用,因为不需要昂贵的设备和设施,而且它们可以由缺乏线虫学或分子技能的人在地方一级完成。
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引用次数: 0
De novo long-read assembly and annotation for genomes of two cotton-associated Fusarium oxysporum isolates 两个棉花相关尖孢镰刀菌分离株基因组的重新长读组装和注释
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-06-04 DOI: 10.1007/s13313-025-01057-y
Donald M. Gardiner, Elizabeth A. B. Aitken, Peter van Dam, Duy P. Le, Linda J. Smith, Andrew Chen

Fusarium wilt of cotton is a major production constraint worldwide caused by Fusarium oxysporum f. sp. vasinfectum. Strain variations contribute to differences in disease expression across different geographic locations. Genomes for two Australian isolates of F. oxysporum isolated from cotton are presented. The strains differ in their symptomatology on cotton plants and group in distinct lineages, different to those cotton infecting strains found overseas.

棉花枯萎病是全球棉花生产的主要制约因素之一。菌株变异导致不同地理位置的疾病表达差异。报道了从棉花中分离的两个澳大利亚尖孢镰刀菌的基因组。这些菌株在棉花植株上的症状不同,在不同的谱系中分组,与国外发现的棉花侵染菌株不同。
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引用次数: 0
First report of Boeremia exigua causing leaf spot of tobacco (Nicotiana tabacum) in China 中国首次报道引起烟草叶斑病的布尔米菌
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-06-02 DOI: 10.1007/s13313-025-01056-z
Tingting Xu, Pan Ma, Rubing Xu, Tom Hsiang, Junbin Huang, Lu Zheng, Yuan Fang, Yanyan Li

Tobacco (Nicotiana tabacum L.) is an economically important crop, widely cultivated in China. Since 2021, a new leaf spot disease has been seen frequently in Enshi, Xiangyang, Yichang, and Shiyan, all in Hubei Province, China. Diseased leaves exhibiting roundish lesions with greenish-yellow edges were collected to determine the causal agent in summer 2022. After isolation, morphological characterization, and molecular identification (ITS, LSU, and TUB), the pathogen of the new tobacco leaf spot disease was identified as Boeremia exigua. Inoculation tests showed that B. exigua strains could cause this disease on detached tobacco leaves, and fungi were re-isolated with morphology identical to the inoculated strain, confirming Koch’s postulates. This is the first report of tobacco leaf spot caused by B. exigua worldwide.

烟草(Nicotiana tabacum L.)是一种重要的经济作物,在中国广泛种植。自2021年以来,中国湖北省恩施、襄阳、宜昌、十堰等地频繁出现一种新型叶斑病。为确定2022年夏季的致病因子,收集了呈圆形病变、边缘呈黄绿色的病叶。经分离鉴定、形态鉴定和分子鉴定(ITS、LSU和TUB),鉴定烟草新叶斑病病原为Boeremia exigua。接种试验表明,枯萎芽孢杆菌菌株可以在离体烟草叶片上引起该病,并且重新分离出与接种菌株形态相同的真菌,证实了Koch的假设。这是世界上首次报道由烟叶斑菌引起的烟草叶斑病。
{"title":"First report of Boeremia exigua causing leaf spot of tobacco (Nicotiana tabacum) in China","authors":"Tingting Xu,&nbsp;Pan Ma,&nbsp;Rubing Xu,&nbsp;Tom Hsiang,&nbsp;Junbin Huang,&nbsp;Lu Zheng,&nbsp;Yuan Fang,&nbsp;Yanyan Li","doi":"10.1007/s13313-025-01056-z","DOIUrl":"10.1007/s13313-025-01056-z","url":null,"abstract":"<div><p>Tobacco (<i>Nicotiana tabacum</i> L.) is an economically important crop, widely cultivated in China. Since 2021, a new leaf spot disease has been seen frequently in Enshi, Xiangyang, Yichang, and Shiyan, all in Hubei Province, China. Diseased leaves exhibiting roundish lesions with greenish-yellow edges were collected to determine the causal agent in summer 2022. After isolation, morphological characterization, and molecular identification (ITS, LSU, and TUB), the pathogen of the new tobacco leaf spot disease was identified as <i>Boeremia exigua.</i> Inoculation tests showed that <i>B. exigua</i> strains could cause this disease on detached tobacco leaves, and fungi were re-isolated with morphology identical to the inoculated strain, confirming Koch’s postulates. This is the first report of tobacco leaf spot caused by <i>B. exigua</i> worldwide.</p></div>","PeriodicalId":8598,"journal":{"name":"Australasian Plant Pathology","volume":"54 3","pages":"437 - 440"},"PeriodicalIF":1.1,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s13313-025-01056-z.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145161031","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Occurrence of Trichoconiella padwickii causing leaf blight on rice (Oryza sativa L.) in China and its phylogenetic analysis 引起水稻叶枯病的帕氏毛锥虫在中国的发生及其系统发育分析
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-05-29 DOI: 10.1007/s13313-025-01055-0
Hai-Yan Ke, Feng-Yin Liu, Zhi-He Yu, Younes M. Rashad, Jian-Xin Deng, Jun-Liang Yin

Rice (Oryza sativa L.) is a widely cultivated grain crop and a significant source of dietary carbohydrates. In 2019 and 2022, leaf blight disease was observed on rice in Jingzhou City, Hubei Province, China, that causal fungus was isolated from the disease lesions. Based on the morphological characteristics, sequences of internal transcribed spacer (ITS) of rDNA region and pathogenicity tests, it is identified as Alternaria padwickii (Ganguly) Ellis (1971), which is morphologically considered as Trichoconiella padwickii (Ganguly) Jain (1975). However, its molecular phylogeny is rare to know. According to the phylogenetic analysis of ITS, large-subunit ribosomal RNA (LSU) and RNA polymerase second largest subunit (RPB2) gene regions, the species should not belong to the genus Alternaria, which is the genus Trichoconiella in Pleosporaceae. This is the first report of leaf blight on rice caused by Trichoconiella padwickii in China and the determination of the phylogenetic position for Trichoconiella in Pleosporaceae.

水稻(Oryza sativa L.)是一种广泛种植的粮食作物,也是膳食碳水化合物的重要来源。2019年和2022年,在中国湖北省荆州市观察到水稻叶枯病,从病害中分离到致病真菌。根据形态学特征、rDNA区域内转录间隔段(ITS)序列和致病性测试,鉴定为Alternaria padwickii (Ganguly) Ellis(1971),形态学上认为为Trichoconiella padwickii (Ganguly) Jain(1975)。然而,其分子系统发育尚不清楚。根据ITS、大亚基核糖体RNA (LSU)和RNA聚合酶第二大亚基(RPB2)基因区域的系统发育分析,该种属不属于多孢菌科毛菌属。这是中国首次报道由帕氏毛锥虫引起的水稻叶枯病,并确定了毛锥虫在多孢科中的系统发育位置。
{"title":"Occurrence of Trichoconiella padwickii causing leaf blight on rice (Oryza sativa L.) in China and its phylogenetic analysis","authors":"Hai-Yan Ke,&nbsp;Feng-Yin Liu,&nbsp;Zhi-He Yu,&nbsp;Younes M. Rashad,&nbsp;Jian-Xin Deng,&nbsp;Jun-Liang Yin","doi":"10.1007/s13313-025-01055-0","DOIUrl":"10.1007/s13313-025-01055-0","url":null,"abstract":"<div><p>Rice (<i>Oryza sativa</i> L.) is a widely cultivated grain crop and a significant source of dietary carbohydrates. In 2019 and 2022, leaf blight disease was observed on rice in Jingzhou City, Hubei Province, China, that causal fungus was isolated from the disease lesions. Based on the morphological characteristics, sequences of internal transcribed spacer (ITS) of rDNA region and pathogenicity tests, it is identified as <i>Alternaria padwickii</i> (Ganguly) Ellis (1971), which is morphologically considered as <i>Trichoconiella padwickii</i> (Ganguly) Jain (1975). However, its molecular phylogeny is rare to know. According to the phylogenetic analysis of ITS, large-subunit ribosomal RNA (LSU) and RNA polymerase second largest subunit (<i>RPB2</i>) gene regions, the species should not belong to the genus <i>Alternaria</i>, which is the genus <i>Trichoconiella</i> in Pleosporaceae. This is the first report of leaf blight on rice caused by <i>Trichoconiella padwickii</i> in China and the determination of the phylogenetic position for <i>Trichoconiella</i> in Pleosporaceae.</p></div>","PeriodicalId":8598,"journal":{"name":"Australasian Plant Pathology","volume":"54 3","pages":"371 - 376"},"PeriodicalIF":1.1,"publicationDate":"2025-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145170398","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
First report of basal root rot disease caused by Fusarium acuminatum in Garlic (Allium sativum L.) in Türkiye 大蒜尖孢镰刀菌引起的根腐病在我国首次报道
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-05-29 DOI: 10.1007/s13313-025-01054-1
Kamil Sarpkaya, Olcay Dedecan, Semiha Yüceer

Garlic (Allium sativum L.) is extensively cultivated across Türkiye, with a total annual production reaching 175.870 tons highlighting its significance as both a staple food crop and a commercially valuable commodity in domestic and international markets. Survey and isolation studies were conducted during the 2022–2024 growing seasons in three provinces. Morphological and molecular characterization (tef1-α and RPB2 regions) confirmed the presence of F. acuminatum in 7 of 15 isolates obtained from symptomatic plants. Pathogenicity was verified through artificial inoculation, and significant differences in disease incidence were observed among isolates from different regions. This study presents the first confirmed report of F. acuminatum as a causal agent of basal root rot in garlic in Türkiye.

大蒜(Allium sativum L.)在泰国广泛种植,年总产量达到175.870吨,突出了其作为主要粮食作物和在国内和国际市场上具有商业价值的商品的重要性。在3个省进行了2022-2024年生长季的调查和分离研究。形态学和分子鉴定(tef1-α和RPB2区)证实15个分离株中有7个存在尖锐镰刀菌。通过人工接种验证致病性,不同地区分离株的发病率有显著差异。本研究首次证实了尖孢镰刀菌是引起大蒜根腐病的病原菌。
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引用次数: 0
Development and validation of X-ComEC qPCR, a novel assay for accurate universal detection of both Xylella fastidiosa and Xylella taiwanensis X-ComEC qPCR的建立和验证,这是一种准确检测苛养木杆菌和台湾木杆菌的新方法
IF 1.1 4区 农林科学 Q4 PLANT SCIENCES Pub Date : 2025-05-24 DOI: 10.1007/s13313-025-01051-4
Johanna Wong-Bajracharya, John Webster, Luciano A. Rigano, Pragya Kant, Anna Englezou, Fridjof Snijders, Dor Agmon, Rebecca Roach, Cuiping Wang, Monica Kehoe, Rachel Mann, Fiona E. Constable, Nerida J. Donovan, Toni A. Chapman

Xylella fastidiosa is a devastating plant pathogenic bacteria known for its broad host range, in contrast to the related species Xylella taiwanensis, which is only known to cause disease in Asian pears. Despite the potential threats they pose to Australian agriculture, diagnostic assays capable of detecting both Xylella species are scarce. Bridging this critical gap, this study presents the development of the X-ComEC qPCR assay that targets a genus-specific DNA sequence, enabling accurate generic detection of all Xylella species. Benchmarking this novel qPCR assay against other published Xylella qPCR assays demonstrated its superior performance. The X-ComEC qPCR assay stands out as the only assay that can accurately detect both X. fastidiosa and X. taiwanensis without cross-reactivity with related bacteria. We have also carried out a comprehensive inter-laboratory test performance study, which demonstrated that the X-ComEC qPCR and the qPCR described by Harper et al. (Development of LAMP and real-time PCR methods for the rapid detection of Xylella fastidiosa for quarantine and field applications; erratum 2013) are highly robust and ready to use in Australia. Combining these two assays into a duplex qPCR enables simultaneous detection and species-level identification of X. fastidiosa and X. taiwanensis. The findings of this study have been incorporated into the Australian National Diagnostic Protocol for Xylella detection, arming diagnostic laboratories with critical knowledge to combat these globally significant pathogens. Overall, the collaborative and systematic approach employed in this study provides a model for developing and validating assays for all plant pathogens.

苛养木杆菌是一种毁灭性的植物致病菌,以其广泛的寄主范围而闻名,而与之相关的物种台湾木杆菌只在亚洲梨中引起疾病。尽管它们对澳大利亚农业构成了潜在的威胁,但能够检测到这两种木杆菌的诊断分析却很少。为了弥补这一关键空白,本研究提出了针对属特异性DNA序列的X-ComEC qPCR检测的发展,从而能够准确地检测所有木杆菌物种。将这种新型qPCR检测方法与其他已发表的木杆菌qPCR检测方法进行对比,证明了其优越的性能。X-ComEC qPCR检测是唯一一种能够准确检测苛养双歧杆菌和台湾双歧杆菌而不与相关细菌发生交叉反应的检测方法。我们还进行了一项全面的实验室间测试性能研究,结果表明,X-ComEC qPCR和Harper等人描述的qPCR (LAMP和实时PCR方法的开发,用于检疫和现场应用,用于快速检测苛病木杆菌;2013年勘误)非常可靠,可以在澳大利亚使用。将这两种方法结合成双工qPCR,可以同时检测和鉴定苛养X.和台湾X.。这项研究的结果已被纳入澳大利亚国家木杆菌检测诊断方案,为诊断实验室提供了与这些全球重要病原体作斗争的关键知识。总的来说,本研究中采用的协作和系统方法为开发和验证所有植物病原体的检测方法提供了一个模型。
{"title":"Development and validation of X-ComEC qPCR, a novel assay for accurate universal detection of both Xylella fastidiosa and Xylella taiwanensis","authors":"Johanna Wong-Bajracharya,&nbsp;John Webster,&nbsp;Luciano A. Rigano,&nbsp;Pragya Kant,&nbsp;Anna Englezou,&nbsp;Fridjof Snijders,&nbsp;Dor Agmon,&nbsp;Rebecca Roach,&nbsp;Cuiping Wang,&nbsp;Monica Kehoe,&nbsp;Rachel Mann,&nbsp;Fiona E. Constable,&nbsp;Nerida J. Donovan,&nbsp;Toni A. Chapman","doi":"10.1007/s13313-025-01051-4","DOIUrl":"10.1007/s13313-025-01051-4","url":null,"abstract":"<div><p><i>Xylella fastidiosa</i> is a devastating plant pathogenic bacteria known for its broad host range, in contrast to the related species <i>Xylella taiwanensis</i>, which is only known to cause disease in Asian pears. Despite the potential threats they pose to Australian agriculture, diagnostic assays capable of detecting both <i>Xylella</i> species are scarce. Bridging this critical gap, this study presents the development of the X-<i>ComEC</i> qPCR assay that targets a genus-specific DNA sequence, enabling accurate generic detection of all <i>Xylella</i> species. Benchmarking this novel qPCR assay against other published <i>Xylella</i> qPCR assays demonstrated its superior performance. The X-<i>ComEC</i> qPCR assay stands out as the only assay that can accurately detect both <i>X. fastidiosa</i> and <i>X. taiwanensis</i> without cross-reactivity with related bacteria. We have also carried out a comprehensive inter-laboratory test performance study, which demonstrated that the X-<i>ComEC</i> qPCR and the qPCR described by Harper et al. (Development of LAMP and real-time PCR methods for the rapid detection of Xylella fastidiosa for quarantine and field applications; erratum 2013) are highly robust and ready to use in Australia. Combining these two assays into a duplex qPCR enables simultaneous detection and species-level identification of <i>X. fastidiosa</i> and <i>X. taiwanensis.</i> The findings of this study have been incorporated into the Australian National Diagnostic Protocol for <i>Xylella</i> detection, arming diagnostic laboratories with critical knowledge to combat these globally significant pathogens. Overall, the collaborative and systematic approach employed in this study provides a model for developing and validating assays for all plant pathogens.</p></div>","PeriodicalId":8598,"journal":{"name":"Australasian Plant Pathology","volume":"54 3","pages":"343 - 356"},"PeriodicalIF":1.1,"publicationDate":"2025-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s13313-025-01051-4.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145168757","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Australasian Plant Pathology
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