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Evaluating Pigments as a Biosignature: Abiotic/Prebiotic Synthesis of Pigments and Pigment Mimics in Planetary Environments. 评估作为生物特征的色素:行星环境中色素和色素模拟物的非生物/前生物合成。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-08-01 Epub Date: 2024-05-20 DOI: 10.1089/ast.2023.0006
Laura E Rodriguez, Jessica M Weber, Laura M Barge

Pigments serve a multitude of functions in biology including light harvesting for photosynthesis, radiation protection, membrane support, and defense. The ubiquity of pigments-especially within extremophiles found in high-radiation, high-salinity, and dry environments-and their detectability via mission-ready techniques have elevated these molecules as promising targets in the search for evidence of life elsewhere. Moreover, the detection of pigments has been proposed as a "smoking gun" for extraterrestrial life as it has been suggested that these molecules cannot be generated abiotically. However, while pigments may hold promise as a biosignature, current understanding of their possible prebiotic origins remains understudied and uncertain. Better understanding of the abiotic synthesis of pigments is critical for evaluating the biogenicity of any pigment detected during missions, including by the Mars Perseverance rover or from returned samples. Compounding this uncertainty is the broad definition of pigment as it includes any compound capable of absorbing visible light and by itself does not specify a particular chemical motif. While not experimentally verified, there are promising prebiotic routes for generating pigments including hemes, chlorophylls, and carotenoids. Herein, we review the biochemistry of pigments, the inherent assumptions made when searching for these molecules in the field, their abiotic synthesis in industry and prebiotic reactions, prebiotically relevant molecules that can mimic their spectral signatures, and implications/recommendations for future work.

色素在生物学中具有多种功能,包括光合作用采光、辐射防护、膜支持和防御。色素无处不在,特别是在高辐射、高盐度和干燥环境中的嗜极生物中,而且可以通过任务就绪技术进行检测,这使得这些分子成为寻找其他地方生命证据的有希望的目标。此外,色素的检测被认为是地外生命的 "烟枪",因为有人认为这些分子不可能在非生物环境中产生。然而,尽管色素可能有望成为一种生物特征,但目前对其可能的前生物起源的了解仍然不足且不确定。更好地了解色素的非生物合成对于评估任务期间(包括 "坚毅 "号火星探测器或从返回的样本中)检测到的任何色素的生物起源性至关重要。使这种不确定性更加复杂的是色素的定义过于宽泛,因为它包括任何能够吸收可见光的化合物,而且其本身并不指定特定的化学结构。虽然未经实验验证,但有希望通过前生物途径生成色素,包括庚烷、叶绿素和类胡萝卜素。在此,我们回顾了色素的生物化学、在实地寻找这些分子时的固有假设、它们在工业中的非生物合成和益生反应、可模仿其光谱特征的益生相关分子,以及对未来工作的影响/建议。
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引用次数: 0
Exoplanet Innovators Interview: Sara Seager Interviews Dave Charbonneau. 系外行星创新者访谈:Sara Seager 采访 Dave Charbonneau。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-08-01 DOI: 10.1089/ast.2024.0101
Sara Seager
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引用次数: 0
Building Identity and Community for Early Career Professionals in the Emerging Field of Astrobiology. 在新兴的天体生物学领域为早期职业专业人员建立身份和社区。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-07-01 DOI: 10.1089/ast.2023.0066
Bradford Davey, Hilarie Davis, Melissa Kirven-Brooks

To support training and foster retention in the emerging field of astrobiology, NASA has funded opportunities for graduate students and early career scientists to develop a community, foster interdisciplinarity, increase confidence, and showcase career options. The design of these opportunities builds on research on factors that increase retention, including feeling competent, having autonomy and a sense of purpose, having a sense of identity, and being connected to others in the field. Findings are reported from retrospective studies of two NASA career-building opportunities, the Astrobiology Graduate Conference and the International Astrobiology Summer School held in Santander, Spain. We present evidence that attendees gain confidence by presenting to, and working with, their peers, and feel competent to express their ideas and interests and build relationships in the field that continue after the experiences. Many say that they feel less isolated and go on to present or publish with colleagues they meet. Their career options also expand by meeting potential colleagues from different disciplines. Based on the findings, participating in either of these long-running programs shows clear positive impact on early career astrobiology professionals.

为了支持天体生物学这一新兴领域的培训和留住人才,美国国家航空航天局资助为研究生和早期职业科学家提供机会,以发展社区、促进跨学科、增强信心和展示职业选择。这些机会的设计建立在对提高留用率因素的研究基础之上,这些因素包括感觉有能力、有自主权和目标感、有认同感以及与该领域的其他人有联系。我们报告了对美国国家航空航天局(NASA)两个职业建设机会--天体生物学研究生会议和在西班牙桑坦德举办的国际天体生物学暑期学校--的回顾性研究结果。我们提供的证据表明,参加者通过向同行介绍情况并与他们合作,获得了自信,感到有能力表达自己的想法和兴趣,并在该领域建立了关系,这种关系在经历之后仍在继续。许多人表示,他们不再感到孤立无援,并继续与他们结识的同事一起做报告或发表论文。通过结识不同学科的潜在同事,他们的职业选择也得到了扩展。根据研究结果,参加这些长期项目中的任何一个都会对早期职业天体生物学专业人员产生明显的积极影响。
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引用次数: 0
Life Detection on Icy Moons Using Flow Cytometry and Intrinsically Fluorescent Biomolecules. 利用流式细胞仪和本征荧光生物分子探测冰月上的生命。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-07-01 DOI: 10.1089/ast.2023.0050
Matthew L Wallace, Nicholas Tallarida, Wayne W Schubert, James Lambert

In a previous experiment, we demonstrated the capability of flow cytometry as a potential life detection technology for icy moons using exogenous fluorescent stains (Wallace et al., 2023). In this companion experiment, we demonstrated the capability of flow cytometry to detect life using intrinsically fluorescent biomolecules in addition to exogenous stains. We used a method similar to our previous work to positively identify six classes of intrinsically fluorescent biomolecules: flavins, carotenoids, chlorophyll, tryptophan, NAD+, and NAD(P)H. We demonstrated the effectiveness of this method with six known organisms and known abiotic material and showed that the cytometer is easily able to distinguish the known organisms and the known abiotic material by using the intrinsic fluorescence of these six biomolecules. To simulate a life detection experiment on an icy moon lander, we used six natural samples with unknown biotic and abiotic content. We showed that flow cytometry can identify all six intrinsically fluorescent biomolecules and can separate the biotic material from the known abiotic material on scatter plots. The use of intrinsically fluorescent biomolecules in addition to exogenous stains will potentially cast a wider net for life detection on icy moons using flow cytometry.

在之前的实验中,我们展示了流式细胞仪作为使用外源荧光染色剂的冰卫星潜在生命探测技术的能力(Wallace 等人,2023 年)。在本配套实验中,我们展示了流式细胞仪除使用外源染色剂外,还能使用内在荧光生物大分子检测生命的能力。我们使用了一种与之前工作类似的方法,对黄素、类胡萝卜素、叶绿素、色氨酸、NAD+ 和 NAD(P)H 这六类本征荧光生物大分子进行了正面识别。我们用六种已知生物和已知非生物材料证明了这种方法的有效性,并表明细胞计数器能够通过这六种生物大分子的内在荧光轻松区分已知生物和已知非生物材料。为了模拟冰月着陆器上的生命探测实验,我们使用了六种生物和非生物含量未知的天然样本。结果表明,流式细胞仪可以识别所有六种本征荧光生物分子,并能在散点图上将生物物质与已知非生物物质区分开来。除了外源染色剂之外,内在荧光生物大分子的使用有可能为利用流式细胞仪探测冰卫星上的生命提供更广泛的方法。
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引用次数: 0
Variable and Large Losses of Diagnostic Biomarkers After Simulated Cosmic Radiation Exposure in Clay- and Carbonate-Rich Mars Analog Samples. 富含粘土和碳酸盐的火星模拟样本在模拟宇宙辐射暴露后诊断性生物标志物的不同和大量损失。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-07-01 Epub Date: 2024-07-09 DOI: 10.1089/ast.2023.0123
Anaïs Roussel, Amy C McAdam, Alex A Pavlov, Christine A Knudson, Cherie N Achilles, Dionysis I Foustoukos, Jason P Dworkin, S Andrejkovičová, Dina M Bower, Sarah Stewart Johnson

Mars has been exposed to ionizing radiation for several billion years, and as part of the search for life on the Red Planet, it is crucial to understand the impact of radiation on biosignature preservation. Several NASA and ESA missions are looking for evidence of ancient life in samples collected at depths shallow enough that they have been impacted by galactic cosmic rays (GCRs). In this study, we exposed a diverse set of Mars analog samples to 0.9 Megagray (MGy) of gamma radiation to mimic 15 million years of exposure on the Martian surface. We measured no significant impact of GCRs on the total organic carbon (TOC) and bulk stable C isotopes in samples with initial TOC concentration > 0.1 wt. %; however, diagnostic molecular biosignatures presented a wide range of degradation that didn't correlate to factors like mineralogy, TOC, water content, and surface area. Exposure dating suggests that the surface of Gale crater has been irradiated at more than five times our dose, yet using this relatively low dose and "best-case scenario" geologically recalcitrant biomarkers, large and variable losses were nevertheless evident. Our results empasize the importance of selecting sampling sites at depth or recently exposed at the Martian surface.

火星暴露在电离辐射中已有几十亿年,作为在红色星球上寻找生命的一部分,了解辐射对生物特征保存的影响至关重要。美国国家航空航天局(NASA)和欧洲航天局(ESA)的一些任务正在从采集的样本中寻找远古生命的证据,这些样本采集的深度很浅,已经受到银河宇宙射线(GCR)的影响。在这项研究中,我们将一组不同的火星模拟样本暴露在 0.9 兆格瑞(MGy)的伽马辐射下,以模拟火星表面 1,500 万年的辐射。在初始 TOC 浓度大于 0.1 wt. % 的样品中,我们测得伽马辐射对总有机碳(TOC)和大量稳定 C 同位素没有明显影响;但是,诊断性分子生物特征出现了广泛的降解,与矿物学、TOC、含水量和表面积等因素无关。辐照年代测定表明,盖尔陨石坑表面受到的辐照剂量是我们所测剂量的五倍以上,然而,使用这种相对较低的剂量和 "最佳情况 "的地质难降解生物标志物,却明显出现了大量不同的损失。我们的研究结果证明了选择深度采样点或最近暴露在火星表面的采样点的重要性。
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引用次数: 0
Unveiling Challenging Microbial Fossil Biosignatures from Rio Tinto with Micro-to-Nanoscale Chemical and Ultrastructural Imaging. 利用微纳米级化学和超微结构成像技术揭示力拓公司具有挑战性的微生物化石生物特征。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-07-01 Epub Date: 2024-07-10 DOI: 10.1089/ast.2023.0127
Lara Maldanis, David Fernandez-Remolar, Laurence Lemelle, Andrew H Knoll, Manuel Guizar-Sicairos, Mirko Holler, Francisco Mateus Cirilo da Silva, Valérie Magnin, Michel Mermoux, Alexandre Simionovici

Understanding the nature and preservation of microbial traces in extreme environments is crucial for reconstructing Earth's early biosphere and for the search for life on other planets or moons. At Rio Tinto, southwestern Spain, ferric oxide and sulfate deposits similar to those discovered at Meridiani Planum, Mars, entomb a diversity of fossilized organisms, despite chemical conditions commonly thought to be challenging for life and fossil preservation. Investigating this unique fossil microbiota can elucidate ancient extremophile communities and the preservation of biosignatures in acidic environments on Earth and, potentially, Mars. In this study, we use an innovative multiscale approach that combines the state-of-the-art synchrotron X-ray nanoimaging methods of ptychographic X-ray computed laminography and nano-X-ray fluorescence to reveal Rio Tinto's microfossils at subcellular resolution. The unprecedented nanoscale views of several different specimens within their geological and geochemical contexts reveal novel intricacies of preserved microbial communities. Different morphotypes, ecological interactions, and possible taxonomic affinities were inferred based on qualitative and quantitative 3D ultrastructural information, whereas diagenetic processes and metabolic affinities were inferred from complementary chemical information. Our integrated nano-to-microscale analytical approach revealed previously invisible microbial and mineral interactions, which complemented and filled a gap of spatial resolution in conventional methods. Ultimately, this study contributes to the challenge of deciphering the faint chemical and morphological biosignatures that can indicate life's presence on the early Earth and on distant worlds.

了解极端环境中微生物痕迹的性质和保存情况,对于重建地球早期生物圈和寻找其他行星或卫星上的生命至关重要。在西班牙西南部的力拓(Rio Tinto),氧化铁和硫酸盐沉积物与在火星子午线(Meridiani Planum)发现的沉积物相似,尽管化学条件通常被认为对生命和化石保存具有挑战性,但仍埋藏着多种生物化石。研究这种独特的微生物化石群可以阐明古代嗜极生物群落以及地球和火星酸性环境中生物特征的保存情况。在这项研究中,我们采用了一种创新的多尺度方法,结合了最先进的同步辐射 X 射线纳米成像方法--X 射线计算机层析成像和纳米 X 射线荧光,以亚细胞分辨率揭示了力拓的微化石。以前所未有的纳米尺度观察地质和地球化学背景下的几种不同标本,揭示了保存下来的微生物群落错综复杂的新特点。根据定性和定量的三维超微结构信息推断出了不同的形态、生态相互作用以及可能的分类亲缘关系,而成岩过程和代谢亲缘关系则是通过补充化学信息推断出来的。我们从纳米到微米尺度的综合分析方法揭示了以前看不到的微生物和矿物之间的相互作用,补充并填补了传统方法在空间分辨率方面的空白。最终,这项研究为破解微弱的化学和形态生物特征这一挑战做出了贡献,这些特征可以表明生命存在于早期地球和遥远的世界上。
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引用次数: 0
The Preservation and Spectral Detection of Historic Museum Specimen Microbial Mat Biosignatures Within Martian Dust: Lessons Learned for Mars Exploration and Sample Return. 火星尘埃中历史博物馆标本微生物母体生物特征的保存和光谱检测:火星探索和样本送回的经验教训。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-07-01 Epub Date: 2024-07-09 DOI: 10.1089/ast.2023.0118
Louisa J Preston, Anne D Jungblut, Wren Montgomery, Connor J Ballard, Jo Wilbraham

The key building blocks for life on Mars could be preserved within potentially habitable paleo-depositional settings with their detection possible by utilizing mid-infrared spectroscopy; however, a definite identification and confirmation of organic or even biological origin will require the samples to be returned to Earth. In the present study, Fourier-transform infrared (FTIR) spectroscopic techniques were used to characterize both mineralogical and organic materials within Mars dust simulant JSC Mars-1 and ancient Antarctic cyanobacterial microbial mats from 1901 to 1904 Discovery Expedition. When FTIR spectroscopy is applied to cyanobacterial microbial mat communities, the resulting spectra will reflect the average biochemical composition of the mats rather than taxa-specific spectral patterns of the individual organisms and can thus be considered as a total chemical analysis of the mat colony. This study also highlights the potential difficulties in the detection of these communities on Mars and which spectral biosignatures will be most detectable within geological substrates. Through the creation and analysis of a suite of dried microbial mat material and Martian dust simulant mixtures, the spectral signatures and wavenumber positions of CHx aliphatic hydrocarbons and the C-O and O-H bands of polysaccharides remained detectable and may be detectable within sample mixtures obtained through Mars Sample Return activities.

火星生命的关键组成部分可能保存在潜在宜居的古沉积环境中,利用中红外光谱可以对其进行探测;但是,要明确识别和确认其有机甚至生物来源,需要将样本送回地球。在本研究中,傅立叶变换红外(FTIR)光谱技术被用来描述火星尘埃模拟物 JSC 火星-1 和 1901 年至 1904 年发现考察队的南极古蓝藻微生物垫中的矿物和有机物质的特征。将傅立叶变换红外光谱法应用于蓝藻微生物垫群落时,得到的光谱将反映垫群落的平均生化组成,而不是单个生物的特定分类群的光谱模式,因此可被视为垫群落的总体化学分析。这项研究还强调了在火星上探测这些群落的潜在困难,以及在地质基质中哪些光谱生物特征最容易被探测到。通过创建和分析一套干燥的微生物垫材料和火星尘埃模拟混合物,CHx 脂肪族碳氢化合物和多糖的 C-O 和 O-H 波段的光谱特征和波长位置仍然可以检测到,并且可能在通过火星样品返回活动获得的样品混合物中检测到。
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引用次数: 0
Radiolytic Effects on Biological and Abiotic Amino Acids in Shallow Subsurface Ices on Europa and Enceladus. 辐射对欧罗巴和恩克拉多斯浅表下冰中生物和非生物氨基酸的影响。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-07-01 DOI: 10.1089/ast.2023.0120
Alexander A Pavlov, Hannah McLain, Daniel P Glavin, Jamie E Elsila, Jason Dworkin, Christopher H House, Zhidan Zhang

Europa and Enceladus are key targets to search for evidence of life in our solar system. However, the surface and shallow subsurface of both airless icy moons are constantly bombarded by ionizing radiation that could degrade chemical biosignatures. Therefore, sampling of icy surfaces in future life detection missions to Europa and Enceladus requires a clear understanding of the necessary ice depth where unaltered organic biomolecules might be present. We conducted radiolysis experiments by exposing individual amino acids in ices and amino acids from dead microorganisms in ices to gamma radiation to simulate conditions on these icy worlds. In the pure amino acid samples, glycine did not show a detectable decrease in abundance, whereas the abundance of isovaline decreased by 40% after 4 MGy of exposure. Amino acids in dead Escherichia coli (E. coli) organic matter exhibited a gradual decline in abundances with the increase of exposure dosage, although at much slower rates than individual amino acids. The majority of amino acids in dead A. woodii samples demonstrated a step function decline as opposed to a gradual decline. After the initial drop in abundance with 1 MGy of exposure, those amino acids did not display further decreases in abundance after exposure up to 4 MGy. New radiolysis constants for isolated amino acids and amino acids in dead E. coli material for Europa/Enceladus-like conditions have been derived. Slow rates of amino acid destruction in biological samples under Europa and Enceladus-like surface conditions bolster the case for future life detection measurements by Europa and Enceladus lander missions. Based on our measurements, the "safe" sampling depth on Europa is ∼20 cm at high latitudes of the trailing hemisphere in the area of little impact gardening. Subsurface sampling is not required for the detection of amino acids on Enceladus-these molecules will survive radiolysis at any location on the Enceladus surface. If the stability of amino acids observed in A. woodii organic materials is confirmed in other microorganisms, then the survival of amino acids from a potential biosphere in Europa ice would be significantly increased.

木卫二和土卫二是寻找太阳系生命证据的关键目标。然而,这两颗不透气的冰卫星的表面和浅亚表层不断受到电离辐射的轰击,可能会降低化学生物特征。因此,要在未来的欧罗巴和土卫二生命探测任务中对冰表面进行取样,就必须清楚地了解可能存在未经改变的有机生物分子的必要冰层深度。我们进行了辐射分解实验,将冰中的单个氨基酸和冰中死亡微生物的氨基酸暴露于伽马辐射中,以模拟这些冰雪世界的条件。在纯氨基酸样本中,甘氨酸的丰度没有出现可检测到的下降,而异戊氨酸的丰度在受到 4 MGy 辐射后下降了 40%。随着暴露剂量的增加,死亡大肠杆菌(E. coli)有机物中的氨基酸丰度逐渐下降,但下降速度比单个氨基酸慢得多。木甲藻死亡样本中的大多数氨基酸都呈现阶跃式下降,而不是逐渐下降。这些氨基酸的丰度在受到 1 MGy 暴露后开始下降,但在受到 4 MGy 暴露后丰度没有进一步下降。在类似欧罗巴/恩克拉多斯的条件下,得出了分离氨基酸和死亡大肠杆菌物质中氨基酸的新的辐射分解常数。在木卫二和类土卫二表面条件下,生物样本中氨基酸的破坏速度较慢,这为今后木卫二和类土卫二着陆器任务进行生命探测测量提供了依据。根据我们的测量结果,欧罗巴上的 "安全 "取样深度是在后半球高纬度地区的20厘米左右,该地区几乎没有撞击园地。在恩克拉多斯上探测氨基酸并不需要在地表下取样--这些分子在恩克拉多斯表面的任何位置都可以经受住辐射分解。如果在木卫二有机物中观察到的氨基酸的稳定性在其他微生物中得到证实,那么欧罗巴冰层中潜在生物圈的氨基酸的存活率将大大提高。
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引用次数: 0
Microbial Ecology of an Arctic Travertine Geothermal Spring: Implications for Biosignature Preservation and Astrobiology. 北极洞石地热泉的微生物生态学:对生物特征保存和天体生物学的影响。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-07-01 Epub Date: 2024-07-10 DOI: 10.1089/ast.2023.0130
Ifeoma R Ugwuanyi, Andrew Steele, Mihaela Glamoclija

Jotun springs in Svalbard, Norway, is a rare warm environment in the Arctic that actively forms travertine. In this study, we assessed the microbial ecology of Jotun's active (aquatic) spring and dry spring transects. We evaluated the microbial preservation potential and mode, as well as the astrobiological relevance of the travertines to marginal carbonates mapped at Jezero Crater on Mars (the Mars 2020 landing site). Our results revealed that microbial communities exhibited spatial dynamics controlled by temperature, fluid availability, and geochemistry. Amorphous carbonates and silica precipitated within biofilm and on the surface of filamentous microorganisms. The water discharged at the source is warm, with near neutral pH, and undersaturated in silica. Hence, silicification possibly occurred through cooling, dehydration, and partially by a microbial presence or activities that promote silica precipitation. CO2 degassing and possible microbial contributions induced calcite precipitation and travertine formation. Jotun revealed that warm systems that are not very productive in carbonate formation may still produce significant carbonate buildups and provide settings favorable for fossilization through silicification and calcification. Our findings suggest that the potential for amorphous silica precipitation may be essential for Jezero Crater's marginal carbonates because it significantly increases the preservation potential of putative martian organisms.

挪威斯瓦尔巴特群岛的约顿泉是北极地区罕见的温暖环境,这里的洞石形成活跃。在这项研究中,我们评估了约顿活动(水生)泉和干泉横断面的微生物生态。我们评估了洞石的微生物保存潜力和模式,以及洞石与火星杰泽罗陨石坑(2020 年火星登陆点)边缘碳酸盐的天体生物学相关性。我们的研究结果表明,微生物群落的空间动态受温度、流体可用性和地球化学的控制。无定形碳酸盐和二氧化硅在生物膜内和丝状微生物表面沉淀。水源地排放的水温较高,pH 值接近中性,硅含量不足。因此,硅化可能是通过冷却、脱水以及部分微生物的存在或促进硅沉淀的活动发生的。二氧化碳脱气和可能的微生物作用促使方解石沉淀和石灰华形成。约顿揭示了碳酸盐形成生产力不高的温暖系统仍可能产生大量碳酸盐堆积,并通过硅化和钙化为化石提供有利环境。我们的研究结果表明,无定形二氧化硅沉淀的潜力可能是杰泽罗陨石坑边缘碳酸盐的关键所在,因为它大大提高了推定火星生物的保存潜力。
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引用次数: 0
In Memoriam: David Hochberg (1957-2023). 悼念:戴维-霍赫伯格(1957-2023)。
IF 3.5 3区 物理与天体物理 Q2 ASTRONOMY & ASTROPHYSICS Pub Date : 2024-06-27 DOI: 10.1089/ast.2024.0030
Celia Blanco, Thomas Buhse, Pedro Cintas, Isabel Herreros, Jean-Claude Micheau, Federico Morán, Juan Pérez-Mercader, Josep M Ribó, Michael Stich, Cristóbal Viedma
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引用次数: 0
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