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Mass spectrometric detection of protein-based toxins. 蛋白质毒素的质谱检测。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2012.0072
Annica Tevell Åberg, Kristian Björnstad, Mikael Hedeland

This review focuses on mass spectrometric detection of protein-based toxins, which are among the most toxic substances known. Special emphasis is given to the bacterial toxins botulinum neurotoxin from Clostridium botulinum and anthrax toxins from Bacillus anthracis as well as the plant toxin ricin produced by Ricinus communis. A common feature, apart from their extreme toxicity, is that they are composed of 2 polypeptide chains, one of which is responsible for cell uptake and another that has enzymatic function with the ability to destroy basic cellular functions. These toxins pose a threat, both regarding natural spread and from a terrorism perspective. In order for public health and emergency response officials to take appropriate action in case of an outbreak, whether natural or intentional, there is a need for fast and reliable detection methods. Traditionally, large molecules like proteins have been detected using immunological techniques. Although sensitive, these methods suffer from some drawbacks, such as the risk of false-positives due to cross-reactions and detection of inactive toxin. This article describes recently developed instrumental methods based on mass spectrometry for the reliable detection of botulinum neurotoxins, anthrax toxins, and ricin. Unequivocal identification of a protein toxin can be carried out by mass spectrometry-based amino acid sequencing. Furthermore, in combination with antibody affinity preconcentration and biochemical tests with mass spectrometric detection demonstrating the toxin's enzymatic activity, very powerful analytical methods have been described. In conclusion, the advent of sensitive, easily operated mass spectrometers provides new possibilities for the detection of protein-based toxins.

本文综述了蛋白质毒素的质谱检测,这是已知的毒性最大的物质之一。特别强调细菌毒素肉毒杆菌的肉毒杆菌神经毒素和炭疽杆菌的炭疽毒素以及蓖麻产生的植物毒素蓖麻毒素。除了剧毒外,它们的一个共同特征是由两条多肽链组成,其中一条负责细胞摄取,另一条具有破坏基本细胞功能的酶功能。这些毒素在自然传播和恐怖主义方面都构成威胁。为了使公共卫生和应急官员在爆发时采取适当行动,无论是自然的还是故意的,都需要快速可靠的检测方法。传统上,像蛋白质这样的大分子是用免疫学技术检测的。这些方法虽然敏感,但也存在一些缺点,如交叉反应和检测失活毒素可能产生假阳性。本文介绍了最近发展的基于质谱的可靠检测肉毒杆菌神经毒素、炭疽毒素和蓖麻毒素的仪器方法。蛋白质毒素的明确鉴定可以通过质谱为基础的氨基酸测序进行。此外,结合抗体亲和预浓缩和生物化学测试与质谱检测证明毒素的酶活性,非常强大的分析方法已经被描述。总之,灵敏、易于操作的质谱仪的出现为检测蛋白质毒素提供了新的可能性。
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引用次数: 22
Knowledge communication: a key to successful crisis management. 知识沟通:危机管理成功的关键。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2013.0052
Anders Johansson, Malin Härenstam

A winning concept of crisis management can be summarized in 2 words: knowledge communication. If decision makers, communicators, experts, and the public understand what the crisis is about and share their knowledge, the process of handling it will be optimized. Effective crisis communication implies the necessity of an unhindered but purposeful exchange of information within and between authorities, organizations, media, involved individuals, and groups before, during, and after a crisis. This article focuses on the importance of the before, or prevention, part of a crisis since it holds a rich possibility to enhance the chances for successful crisis management of a bioterrorism incident. An extended perspective on crisis communication efficiently links to a more thorough understanding of risk perception with various stakeholders and the public, which also will be helpful for situational awareness. Furthermore, the grounded baseline for the dialogue type of crisis communication suitable in modern society and to modern social media is achieved by linking to those risk communication efforts that are made. The link between risk and crisis should be afforded more attention since, especially in biosecurity, there would be no crisis without risk negligence and poor or malfunctioning preventive efforts.

一个成功的危机管理理念可以用两个词来概括:知识沟通。如果决策者、传播者、专家和公众了解危机是什么,并分享他们的知识,处理危机的过程将得到优化。有效的危机沟通意味着在危机发生之前、期间和之后,当局、组织、媒体、相关个人和团体内部和之间进行不受阻碍但有目的的信息交流的必要性。这篇文章的重点是前,或预防,危机的一部分的重要性,因为它拥有丰富的可能性,以提高成功的生物恐怖主义事件的危机管理的机会。危机沟通的扩展视角有效地与各种利益相关者和公众对风险感知的更彻底理解联系在一起,这也将有助于情景感知。此外,通过将风险沟通工作与现代社会和现代社交媒体联系起来,可以实现适合现代社会和现代社交媒体的对话型危机沟通的基础基线。风险和危机之间的联系应该得到更多的关注,因为,特别是在生物安全方面,如果没有风险疏忽和不良或失灵的预防努力,就不会有危机。
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引用次数: 14
Analysis of research publications that relate to bioterrorism and risk assessment. 分析与生物恐怖主义和风险评估有关的研究出版物。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2013.0019
Gary C Barker

Research relating to bioterrorism and its associated risks is interdisciplinary and is performed with a wide variety of objectives. Although published reports of this research have appeared only in the past decade, there has been a steady increase in their number and a continuous diversification of sources, content, and document types. In this analysis, we explored a large set of published reports, identified from accessible indices using simple search techniques, and tried to rationalize the patterns and connectivity of the research subjects rather than the detailed content. The analysis is based on a connectivity network representation built from author-assigned keywords. Network analysis reveals a strong relationship between research aimed at bioterrorism risks and research identified with public health. Additionally, the network identifies clusters of keywords centered on emergency preparedness and food safety issues. The network structure includes a large amount of meta-information that can be used for assessment and planning of research activity and for framing specific research interests.

与生物恐怖主义及其相关风险有关的研究是跨学科的,并且具有各种各样的目标。虽然这方面的研究报告是在过去十年才发表的,但它们的数量一直在稳步增长,来源、内容和文档类型也在不断多样化。在本分析中,我们探索了大量已发表的报告,使用简单的搜索技术从可访问的索引中识别,并试图使研究主题的模式和连通性合理化,而不是详细的内容。该分析基于由作者分配的关键字构建的连接性网络表示。网络分析显示,针对生物恐怖主义风险的研究与确定为公共卫生的研究之间存在密切关系。此外,该网络还确定了以应急准备和食品安全问题为中心的关键字集群。该网络结构包含大量元信息,可用于评估和规划研究活动,并用于构建特定的研究兴趣。
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引用次数: 2
IDSR as a platform for implementing IHR in African countries. IDSR作为在非洲国家实施《国际卫生条例》的平台。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2013.0032
Francis Kasolo, Zabulon Yoti, Nathan Bakyaita, Peter Gaturuku, Rebecca Katz, Julie E Fischer, Helen N Perry

Of the 46 countries in the World Health Organization (WHO) African region (AFRO), 43 are implementing Integrated Disease Surveillance and Response (IDSR) guidelines to improve their abilities to detect, confirm, and respond to high-priority communicable and noncommunicable diseases. IDSR provides a framework for strengthening the surveillance, response, and laboratory core capacities required by the revised International Health Regulations [IHR (2005)]. In turn, IHR obligations can serve as a driving force to sustain national commitments to IDSR strategies. The ability to report potential public health events of international concern according to IHR (2005) relies on early warning systems founded in national surveillance capacities. Public health events reported through IDSR to the WHO Emergency Management System in Africa illustrate the growing capacities in African countries to detect, assess, and report infectious and noninfectious threats to public health. The IHR (2005) provide an opportunity to continue strengthening national IDSR systems so they can characterize outbreaks and respond to public health events in the region.

在世界卫生组织(世卫组织)非洲区域的46个国家中,有43个国家正在实施疾病监测和应对综合准则,以提高其发现、确认和应对高度优先的传染病和非传染性疾病的能力。IDSR提供了一个框架,用于加强经修订的《国际卫生条例》[《国际卫生条例(2005)》]所要求的监测、应对和实验室核心能力。反过来,《国际卫生条例》的义务可以成为维持国家对IDSR战略承诺的推动力。根据《国际卫生条例(2005)》报告可能引起国际关注的公共卫生事件的能力依赖于建立在国家监测能力基础上的预警系统。通过IDSR向世卫组织非洲应急管理系统报告的公共卫生事件表明,非洲国家在发现、评估和报告对公共卫生的传染性和非传染性威胁方面的能力日益增强。《国际卫生条例(2005)》提供了一个机会,继续加强国家IDSR系统,使它们能够确定疫情特征并对该区域的公共卫生事件作出反应。
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引用次数: 84
Communications in public health emergency preparedness: a systematic review of the literature. 突发公共卫生事件准备中的传播:文献系统综述。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2013.0038
Elena Savoia, Leesa Lin, Kasisomayajula Viswanath

During a public health crisis, public health agencies engage in a variety of public communication efforts to inform the population, encourage the adoption of preventive behaviors, and limit the impact of adverse events. Given the importance of communication to the public in public health emergency preparedness, it is critical to examine the extent to which this field of study has received attention from the scientific community. We conducted a systematic literature review to describe current research in the area of communication to the public in public health emergency preparedness, focusing on the association between sociodemographic and behavioral factors and communication as well as preparedness outcomes. Articles were searched in PubMed and Embase and reviewed by 2 independent reviewers. A total of 131 articles were included for final review. Fifty-three percent of the articles were empirical, of which 74% were population-based studies, and 26% used information environment analysis techniques. None had an experimental study design. Population-based studies were rarely supported by theoretical models and mostly relied on a cross-sectional study design. Consistent results were reported on the association between population socioeconomic factors and public health emergency preparedness communication and preparedness outcomes. Our findings show the need for empirical research to determine what type of communication messages can be effective in achieving preparedness outcomes across various population groups. They suggest that a real-time analysis of the information environment is valuable in knowing what is being communicated to the public and could be used for course correction of public health messages during a crisis.

在公共卫生危机期间,公共卫生机构参与各种公共沟通工作,告知民众,鼓励采取预防行为,并限制不良事件的影响。鉴于公共卫生应急准备中与公众沟通的重要性,审查这一研究领域受到科学界关注的程度至关重要。我们进行了系统的文献综述,描述了公共卫生应急准备中与公众沟通领域的当前研究,重点关注社会人口统计学和行为因素与沟通以及准备结果之间的关系。文章在PubMed和Embase中检索,并由2名独立审稿人进行评审。共有131篇文章被纳入最后审查。53%的文章是实证性的,其中74%是基于人群的研究,26%使用了信息环境分析技术。没有一个有实验研究设计。基于人群的研究很少得到理论模型的支持,而主要依赖于横断面研究设计。关于人口、社会经济因素与公共卫生应急准备、沟通和准备结果之间的关联,报告了一致的结果。我们的研究结果表明,需要进行实证研究,以确定哪种类型的传播信息可以有效地在不同人群中实现备灾结果。他们认为,对信息环境的实时分析对于了解正在向公众传播的信息是有价值的,并且可以用于在危机期间纠正公共卫生信息的方向。
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引用次数: 73
Separated by a common language: awareness of term usage differences between languages and disciplines in biopreparedness. 用共同语言分隔:认识生物防备中不同语言和学科之间术语用法的差异。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2012.0083
M Gunnar Andersson, Katharina Tomuzia, Charlotta Löfström, Bernd Appel, Luca Bano, Haralampos Keremidis, Rickard Knutsson, Mikael Leijon, Susanna Ekströmer Lövgren, Dario De Medici, Andrea Menrath, Bart J van Rotterdam, Henk J Wisselink, Gary C Barker

Preparedness for bioterrorism is based on communication between people in organizations who are educated and trained in several disciplines, including law enforcement, health, and science. Various backgrounds, cultures, and vocabularies generate difficulties in understanding and interpretating terms and concepts, which may impair communication. This is especially true in emergency situations, in which the need for clarity and consistency is vital. The EU project AniBioThreat initiated methods and made a rough estimate of the terms and concepts that are crucial for an incident, and a pilot database with key terms and definitions has been constructed. Analysis of collected terms and sources has shown that many of the participating organizations use various international standards in their area of expertise. The same term often represents different concepts in the standards from different sectors, or, alternatively, different terms were used to represent the same or similar concepts. The use of conflicting terminology can be problematic for decision makers and communicators in planning and prevention or when handling an incident. Since the CBRN area has roots in multiple disciplines, each with its own evolving terminology, it may not be realistic to achieve unequivocal communication through a standardized vocabulary and joint definitions for words from common language. We suggest that a communication strategy should include awareness of alternative definitions and ontologies and the ability to talk and write without relying on the implicit knowledge underlying specialized jargon. Consequently, cross-disciplinary communication skills should be part of training of personnel in the CBRN field. In addition, a searchable repository of terms and definitions from relevant organizations and authorities would be a valuable addition to existing glossaries for improving awareness concerning bioterrorism prevention planning.

防备生物恐怖主义的基础是各组织中受过执法、卫生和科学等多个学科教育和培训的人员之间的沟通。不同的背景、文化和词汇会给理解和解释术语和概念带来困难,从而影响沟通。这在紧急情况下尤其如此,因为在这种情况下,清晰度和一致性至关重要。欧盟的 AniBioThreat 项目启动了一些方法,对事件中至关重要的术语和概念进行了粗略估计,并建立了一个包含关键术语和定义的试验性数据库。对收集到的术语和来源进行的分析表明,许多参与组织在其专业领域使用各种国际标准。在不同部门的标准中,同一个术语往往代表不同的概念,或者使用不同的术语来代表相同或相似的概念。使用相互矛盾的术语可能会给决策者和沟通者在规划和预防或处理事故时造成问题。由于化学、生物、辐射和核领域植根于多个学科,每个学科都有自己不断演变的术语,因此通过标准化词汇和共同语言中的共同定义来实现明确的沟通可能并不现实。我们建议,交流战略应包括对其他定义和本体的认识,以及不依赖专业术语背后的隐含知识进行交谈和写作的能力。因此,跨学科交流技能应成为化学、生物、辐射和核领域人员培训的一部分。此外,可搜索的相关组织和当局的术语和定义库将是对现有词汇表的宝贵补充,以提高对生物恐怖主义预防规划的认识。
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引用次数: 0
A multidisciplinary approach to increasing preparedness against bioterrorism. 加强防范生物恐怖主义的多学科方法。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2013.0861
Bernd Appel
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引用次数: 2
Federal agency biodefense funding, FY2013-FY2014. 2013- 2014财年联邦机构生物防御资金。
Pub Date : 2013-09-01 Epub Date: 2013-08-01 DOI: 10.1089/bsp.2013.0047
Tara Kirk Sell, Matthew Watson

Since 2001, the United States government has spent substantial resources on preparing the nation against a bioterrorist attack. Earlier articles in this series have analyzed civilian biodefense funding by the federal government for fiscal years (FY) 2001 through proposed funding for FY2013. This article updates those figures with budgeted amounts for FY2014, specifically analyzing the budgets and allocations for biodefense at the Departments of Health and Human Services, Defense, Homeland Security, Agriculture, Commerce, Veterans Affairs, and State; the Environmental Protection Agency; and the National Science Foundation. This article also includes an updated assessment of the proportion of biodefense funding provided for programs that address multiple scientific, public health, healthcare, national security, and international security issues in addition to biodefense. The FY2014 federal budget for civilian biodefense totals $6.69 billion. Of that total, $5.86 billion (88%) is budgeted for programs that have both biodefense and nonbiodefense goals and applications, and $835 million (12%) is budgeted for programs that have objectives solely related to biodefense.

自2001年以来,美国政府投入了大量资源,为国家防范生物恐怖袭击做准备。本系列的早期文章分析了联邦政府从2001财政年度到2013财政年度的民用生物防御资金。本文用2014财年的预算金额更新了这些数字,具体分析了卫生与公众服务部、国防部、国土安全部、农业部、商务部、退伍军人事务部和国务院的生物防御预算和拨款;环境保护署;和国家科学基金会。本文还包括对生物防御资金比例的最新评估,这些资金用于除生物防御外解决多种科学、公共卫生、医疗保健、国家安全和国际安全问题的项目。2014财年民用生物防御的联邦预算总额为66.9亿美元。其中58.6亿美元(88%)用于同时具有生物防御和非生物防御目标和应用的项目,8.35亿美元(12%)用于仅与生物防御相关的项目。
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引用次数: 25
The human-animal interface and zoonotic threats: the Russian Federation approach. 人-动物界面和人畜共患病威胁:俄罗斯联邦的做法。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2013.0054
Tracey McNamara, Alexander Platonov, Tatyana Elleman, Louise Gresham

Zoonotic pathogens have caused the majority of emerging infectious disease events in the past 6 decades. With most emerging infectious diseases arising from animal origins, including many of the select agents identified as most likely candidates for bioterrorism, linking human and animal surveillance systems will be critical to effective disease identification and control in the future. Lack of this linkage has been the focus of a number of important policy papers in recent years. These have expressed concern over the continued lack of preparedness for addressing zoonotic threats and have called for a new approach to integrating biosurveillance. However, these studies have been mainly Western-centric in viewpoint and have overlooked the example of the Russian Federation (RF) Anti-Plague System (AP system). In this article we submit that the RF AP system has select components that effectively address recent concerns and inform the US and UK intersectoral efforts on human-animal health surveillance, forming a basis for US, UK, and RF collaboration.

在过去60年中,大多数新发传染病事件都是由人畜共患病原体引起的。由于大多数新出现的传染病源于动物,包括许多被确定为最有可能成为生物恐怖主义候选者的特定病原体,将人类和动物监测系统联系起来将是未来有效识别和控制疾病的关键。缺乏这种联系是近年来一些重要政策文件的重点。这些国家对应对人畜共患病威胁的准备工作持续不足表示关切,并呼吁采取一种整合生物监测的新方法。然而,这些研究主要以西方为中心,忽视了俄罗斯联邦(RF)抗鼠疫系统(AP系统)的例子。在这篇文章中,我们提出射频AP系统选择了一些组件,这些组件有效地解决了最近的问题,并为美国和英国在人-动物健康监测方面的跨部门努力提供了信息,为美国、英国和射频合作奠定了基础。
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引用次数: 6
Evaluation of DNA extraction methods suitable for PCR-based detection and genotyping of Clostridium botulinum. 适用于肉毒梭菌pcr检测及基因分型的DNA提取方法评价。
Pub Date : 2013-09-01 DOI: 10.1089/bsp.2012.0082
Bruna Auricchio, Fabrizio Anniballi, Alfonsina Fiore, Jeffrey E Skiby, Dario De Medici

Sufficient quality and quantity of extracted DNA is critical to detecting and performing genotyping of Clostridium botulinum by means of PCR-based methods. An ideal extraction method has to optimize DNA yield, minimize DNA degradation, allow multiple samples to be extracted, and be efficient in terms of cost, time, labor, and supplies. Eleven botulinum toxin-producing clostridia strains and 25 samples (10 food, 13 clinical, and 2 environmental samples) naturally contaminated with botulinum toxin-producing clostridia were used to compare 4 DNA extraction procedures: Chelex(®) 100 matrix, Phenol-Cloroform-Isoamyl alcohol, NucliSENS(®) magnetic extraction kit, and DNeasy(®) Blood & Tissue kit. Integrity, purity, and amount of amplifiable DNA were evaluated. The results show that the DNeasy(®) Blood & Tissue kit is the best extraction method evaluated because it provided the most pure, intact, and amplifiable DNA. However, Chelex(®) 100 matrix seems to be suitable for PCR-based methods intended for laboratory diagnosis of suspected outbreaks of botulism, because it is faster and cheaper compared to DNeasy(®) Blood & Tissue kit, and for samples in which the mean of Ct values obtained are statistically different (P>0.05) with respect to the best method, no lack of PCR amplification was shown. In addition, molecular methods for laboratory diagnosis currently are based on a microbial enrichment step prior to PCR, and so the differences in amplification seem to not influence the analytical results.

以pcr为基础的方法检测肉毒梭菌并进行基因分型,提取足够质量和数量的DNA至关重要。理想的提取方法必须优化DNA产率,最小化DNA降解,允许提取多个样品,并且在成本,时间,劳动力和供应方面效率高。采用11株产肉毒杆菌梭菌和25份天然被产肉毒杆菌污染的样品(10份食品、13份临床和2份环境样品),比较4种DNA提取方法:Chelex(®)100基质、苯酚-氯仿-异戊醇、NucliSENS(®)磁力提取试剂盒和DNeasy(®)Blood & Tissue试剂盒。评估可扩增DNA的完整性、纯度和数量。结果表明,DNeasy(®)血液和组织试剂盒是评估的最佳提取方法,因为它提供了最纯净、完整和可扩增的DNA。然而,Chelex(®)100基质似乎适用于基于PCR的方法,用于疑似肉毒中毒的实验室诊断,因为与DNeasy(®)Blood & Tissue试剂盒相比,Chelex(®)100基质更快、更便宜,并且对于获得的Ct值平均值与最佳方法有统计学差异(P>0.05)的样品,并不缺乏PCR扩增。此外,目前用于实验室诊断的分子方法是基于PCR之前的微生物富集步骤,因此扩增的差异似乎不会影响分析结果。
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引用次数: 11
期刊
Biosecurity and bioterrorism : biodefense strategy, practice, and science
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