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Blended/flipped biology classes during COVID-19 新冠肺炎期间的混合/翻转生物课程。
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-06-07 DOI: 10.1002/bmb.21753
Iman Mostafa, Andreas Kakarougkas

Higher education has been significantly affected by the COVID-19 pandemic, disrupting universities worldwide. Unexpectedly, the global academic community was forced to transition to remote and online learning. In many cases, fragilities in the systems of the higher education institutions were exposed, pointing to the need for investment in developing more digital solutions, infrastructure, and teaching modalities. In the post-COVID-19 era, the development and adoption of robust pedagogical modalities is crucial to provide the education systems with effective strategies for designing high-quality courses. Since 2008, MOOCs have been widely used to support billions of students worldwide with flexible, accessible, and high-quality learning experiences. This study attempts to investigate the effectiveness of adopting the MOOC-based flipped approach. We present findings and lessons learned from adopting this approach in two different biology classes using the MITx online materials. Findings on students' preparedness, students' performance, MOOCs integration evaluation, and during-pandemic approach assessment are also explained. In general, the results indicated that students favored the overall experience and the implemented approach. Since the online learning is currently at an evolving stage in Egypt, we believe this study's results might be beneficial for policymakers and Egyptian education institutions in designing strategies to improve the education process.

高等教育受到新冠肺炎疫情的严重影响,扰乱了世界各地的大学。出乎意料的是,全球学术界被迫向远程和在线学习过渡。在许多情况下,高等教育机构系统的脆弱性暴露出来,这表明需要投资开发更多的数字解决方案、基础设施和教学模式。在后COVID-19时代,开发和采用稳健的教学模式对于为教育系统提供设计高质量课程的有效战略至关重要。自2008年以来,慕课已被广泛用于为全球数十亿学生提供灵活、方便和高质量的学习体验。本研究试图调查采用基于MOOC的翻转方法的有效性。我们使用MITx在线材料,在两个不同的生物学课堂上展示了采用这种方法的发现和经验教训。还解释了学生准备情况、学生表现、MOOC综合评估和疫情期间方法评估的结果。总体而言,研究结果表明,学生更喜欢整体体验和实施方法。由于埃及的在线学习目前正处于发展阶段,我们相信这项研究的结果可能有利于决策者和埃及教育机构设计改进教育过程的策略。
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引用次数: 0
The real reason why ATP hydrolysis is spontaneous at pH > 7: It's (mostly) the proton concentration! ATP水解在pH下自发的真正原因 > 7:(主要)是质子浓度!
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-06-06 DOI: 10.1002/bmb.21745
Todd P. Silverstein

Common wisdom holds that ATP hydrolysis is spontaneous because of the weakness of its phosphoanhydride bonds, electrostatic repulsion within the polyanionic ATP4− molecule, and resonance stabilization of the inorganic phosphate and ADP products. By examining the pH-dependence of the hydrolysis Gibbs free energy, we show that in fact, above pH 7, ATP hydrolysis is spontaneous due mainly to the low concentration of the H+ that is released as product. Hence, ATP is essentially just an electrophilic target whose attack by H2O causes the acidity of the water nucleophile to increase dramatically; the spontaneity of the resulting acid ionization supplies much of the released Gibbs free energy. We also find that fermentation lowers pH not due to its organic acid products (e.g., lactic, acetic, formic, or succinic acids), but again, due to the H+ product of ATP hydrolysis.

普遍认为,ATP水解是自发的,因为它的磷酸酐键较弱,聚阴离子ATP4-分子内的静电排斥,以及无机磷酸盐和ADP产物的共振稳定。通过考察水解吉布斯自由能对pH的依赖性,我们发现,事实上,高于pH 7,ATP水解是自发的,主要是由于作为产物释放的H+浓度低。因此,ATP本质上只是一个亲电靶标,其被H2 O攻击会导致水亲核试剂的酸度急剧增加;所产生的酸电离的自发性提供了大部分释放的吉布斯自由能。我们还发现,发酵降低pH值并不是由于其有机酸产物(如乳酸、乙酸、甲酸或琥珀酸),而是由于ATP水解的H+产物。
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引用次数: 1
Teaching biochemistry and metabolism using a YouTube channel during COVID-19 pandemic 新冠肺炎大流行期间,使用YouTube频道教授生物化学和新陈代谢。
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-06-01 DOI: 10.1002/bmb.21754
Fernando Tume

YouTube is a widely recognized video-sharing platform that students often use to search for videos that explain ideas and concepts related to their courses, seminars, or research. With the outbreak of the coronavirus pandemic, education has undergone a dramatic shift toward virtual learning, leading to a surge in the number of YouTube viewers and video creators. This article discusses the launch of a Spanish-language YouTube channel focused on biochemistry and metabolism, which was found to be useful by the author's students enrolled in Nutritional Biochemistry course at Universidad Científica del Sur, Lima Perú. This innovation has also benefited students and teachers across Peru and other Spanish-speaking countries. Based on this experience, teachers and professionals should be encouraged to share their knowledge on this platform, making it a reliable source of information during challenging situations.

YouTube是一个广受认可的视频共享平台,学生们经常使用它来搜索解释与课程、研讨会或研究相关的想法和概念的视频。随着冠状病毒疫情的爆发,教育向虚拟学习发生了戏剧性的转变,导致YouTube观众和视频创作者的数量激增。这篇文章讨论了一个西班牙语YouTube频道的推出,该频道专注于生物化学和新陈代谢,作者的学生在利马Perú的Científica del Sur大学学习营养生物化学课程时发现该频道很有用。这一创新也使秘鲁和其他西班牙语国家的学生和教师受益。基于这一经验,应鼓励教师和专业人员在该平台上分享他们的知识,使其成为应对挑战的可靠信息来源。
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引用次数: 0
Standards for the Doctoral Degrees in the Molecular Biosciences: Recommendations of the Education and Training Committee of the International Union of Biochemistry and Molecular Biology (IUBMB) 分子生物科学博士学位标准:国际生物化学与分子生物学联合会教育与培训委员会的建议
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-05-23 DOI: 10.1002/bmb.21731
Daniel R. Dries, Yang Mooi Lim
The International Union of Biochemistry and Molecular Biology (IUBMB) has as its mission “to foster and support the growth and advancement of biochemistry and molecular biology as the foundation from which the biomolecular sciences derive their basic ideas and techniques in the service of [human]kind.” As part of this mission, the Education and Training Committee (ETC) of IUBMB has published the “Standards for the Doctoral Degrees in the Molecular Biosciences” as a set of international standards for a contemporary doctorate education in biochemistry and molecular biology (BMB). The present work aims to inform the international BMB education community of changes to the Standards for the Doctoral Degrees in the Molecular Biosciences that resulted from a revision adopted by IUBMB in January 2023. We thank the Executive Committee of IUBMB for their valuable assistance and support, the Education and Training Committee for participating in this project, all those who contributed with their comments and other suggestions, and all those who contributed to the previous Recommendations for providing a basis for the ones here presented and for facilitating our work. Final responsibility for the contents of the present Recommendations, however, rests equally with the authors. 2 | BACKGROUND
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引用次数: 0
Teaching Python programming for bioinformatics with Jupyter notebook in the Post-COVID-19 era 在后COVID-19时代,使用Jupyter笔记本为生物信息学教授Python编程。
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-05-18 DOI: 10.1002/bmb.21746
Yash Munnalal Gupta, Satwika Nindya Kirana, Somjit Homchan, Supatcharee Tanasarnpaiboon

The COVID-19 pandemic has forced the Bioinformatics course to switch from on-site teaching to remote learning. This shift has prompted a change in teaching methods and laboratory activities. Students need to have a basic understanding of DNA sequences and how to analyze them using custom scripts. To facilitate learning, we have modified the course to use Jupyter Notebook, which offers an alternative approach to writing custom scripts for basic DNA sequence analysis. This approach allows students to acquire the necessary skills while working remotely. It is a versatile and user-friendly platform that can be used to combine explanations, code, and results in a single document. This feature enables students to interact with the code and results, making the learning process more engaging and effective. Jupyter Notebook provides a hybrid approach to learning basic Python scripting and genomics that is effective for remote teaching and learning during the COVID-19 pandemic.

新冠肺炎疫情迫使生物信息学课程从现场教学转向远程学习。这种转变促使教学方法和实验室活动发生了变化。学生需要对DNA序列有基本的了解,以及如何使用自定义脚本进行分析。为了便于学习,我们修改了课程,使用Jupyter Notebook,它提供了一种为基本DNA序列分析编写自定义脚本的替代方法。这种方法允许学生在远程工作时获得必要的技能。它是一个通用且用户友好的平台,可用于将解释、代码和结果组合到一个文档中。该功能使学生能够与代码和结果进行交互,使学习过程更加引人入胜和有效。Jupyter Notebook为学习基本Python脚本和基因组学提供了一种混合方法,在新冠肺炎大流行期间对远程教学有效。
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引用次数: 1
Themes in molecular life science education: Engaging pedagogies and faculty development for student success 分子生命科学教育的主题:参与教学和教师发展以促进学生的成功
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-05-11 DOI: 10.1002/bmb.21741
Celeste N. Peterson, Odutayo O. Odunuga, Pamela S. Mertz, Joseph J. Provost
Preparing faculty to teach the next generation of STEM students is as essential as ever. Many faculties are learning new approaches to address the foundational knowledge and skills gaps created by the COVID-19 pandemic and grappling with ever-changing students' learning patterns.1–4 After several years of working remotely, faculty are eager to network and learn about current and emerging high impact practices. These approaches will be discussed at the American Society for Biochemistry and Molecular Biology Transforming Undergraduate Education in the Molecular Life Sciences Symposium from July 27 to 30, 2023 at Suffolk University in Boston (https://www.asbmb.org/meetings-events/transformingundergraduate-education). Seasoned and aspiring faculty and science educators must be aware of how to address the needs of an increasingly diverse student population. One approach championed by Dr. Donataire Stalling generates policy based solutions to increasing diversity and inclusion within the chemistry and biochemistry disciplines. He has developed the OXIDE program, which incorporates social science approaches in science education to reduce inequitable practices that have historically led to disproportionate representation in faculties with respect to gender, race-ethnicity, disabilities, and sexual orientation. The impact of the OXIDE program has been very encouraging. Another approach – the growth mindset – has been shown to be a straightforward way of helping college students succeed. Dr. Bill Davis is a strong advocate of the growth mindset method, and uses this inclusive approach to teach his students, emphasizing that the capacity to learn and achieve success is not fixed. This approach has been particularly successful in helping students who face social and economic challenges growing up; Dr. Davis's work and those of others have shown that the growth mindset approach significantly decreases stereotypes and the threats it poses to student learning. Finally, Dr Erin Dolan and Dr Erika Offerdahl have been champions of applying education research to active learning in the classroom to reach all types of students. Faculty development of pedagogical strategies and educational research topics is becoming increasingly collaborative, especially through NSF-supported RCNUBE and DUE grants. Some of the programs supported include MDH CUREs group (NSF Award # 2119918), CRISPR-Cas9 group (NSF Award # 2120417), BASIL group (NSF Award # 1503811), MolecularCaseNet (NSF Award # 2018884), ICABL Assessment group (NSF Award # 2120673), BioMolViz (NSF Award # 1712268 and 1920270) and CURE.net (NSF Award 1061874 and 1730273). Goals of these groups include promoting faculty professional development and teaching practices that enhance minoritized students' learning. These groups are actively looking for additional participants. Faculty starting to implement impactful changes at all levels in higher education are looking for resources and guidance. A framework has been deve
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引用次数: 0
A field guide for implementing a flipped classroom 实施翻转课堂的实地指南
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-05-06 DOI: 10.1002/bmb.21737
Pierre Poulain, Mickael Bertrand, Héloise Dufour, Antoine Taly

The way flipped classrooms are perceived and even practiced by teachers is sometimes approximate. For instance, while the Covid-19 pandemic has pushed many universities to adopt distance learning, flipped classrooms have often been mentioned as a solution in that context. This inducement maintains a confusion between flipped classrooms and distance learning that might be detrimental for students and teachers. Moreover, embarking on a new pedagogical practice such as flipped classroom could be intimidating and time-consuming for the newcomer teacher. For these reasons, this article aims to share some tips for implementing a flipped classroom, with examples from biology and biochemistry. Based on our experiences but also on the current scientific literature, we structured these advise around three phases: preparation, implementation, and follow-up. In the preparation phase, we advise planning early to invert time in class and outside the classroom, but also to say it explicitly, as well as to identify (or optionally create) resources for students to learn in autonomy. In the implementation phase, we suggest to (i) be explicit in the acquisition of knowledge and foster students' autonomy; (ii) explore active learning in class; (iii) develop cooperation and sharing skills; and (iv) differentiate teaching practices to adapt to student needs. Lastly, in the follow-up phase, we propose to (i) evaluate both student learning and the pedagogical setting; (ii) take care of the logistics and the teacher's posture; (iii) document the flipped classroom, and (iv) share the teaching experience.

教师们对翻转课堂的认知甚至实践方式有时都是近似的。例如,虽然新冠肺炎大流行促使许多大学采用远程教育,但在这种情况下,翻转课堂经常被提到作为一种解决方案。这种诱导使得翻转课堂和远程学习之间的混淆可能对学生和教师都是有害的。此外,开始一种新的教学实践,如翻转课堂,对新老师来说可能是令人生畏和耗时的。基于这些原因,本文旨在分享一些实施翻转课堂的技巧,并以生物学和生物化学为例。根据我们的经验以及当前的科学文献,我们围绕三个阶段构建了这些建议:准备、实施和后续行动。在准备阶段,我们建议尽早规划课堂内外的时间,但也要明确地说出来,以及确定(或选择创建)学生自主学习的资源。在实施阶段,我们建议:(1)明确知识的获取,培养学生的自主性;(ii)探索课堂上的主动学习;(iii)发展合作和分享技能;(四)区分教学实践,以适应学生的需要。最后,在后续阶段,我们建议(i)评估学生的学习和教学环境;(二)负责后勤和老师的姿势;(三)记录翻转课堂;(四)分享教学经验。
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引用次数: 0
Scientific seminars in lockdown: Lessons for a post-pandemic time in defense of a permanent platform for science dissemination in the world 封锁期间的科学研讨会:大流行后时期捍卫世界科学传播永久平台的经验教训
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-05-06 DOI: 10.1002/bmb.21742
Bruna Sabatke, Izadora Volpato Rossi, Graciela E. Ramirez, Marcel I. Ramirez

In an academic semester, living in social isolation and under restrictions of the pandemic, we organized weekly multidisciplinary seminars from a postgraduate course program in Curitiba, Southern Brazil, integrating students from different regions of Brazil and South America. Outstanding researchers from Brazil, Germany, France, Argentina, Mexico, Portugal, England, and United States’ institutions gave seminars on chronic and infectious diseases with immunological, pharmacological, biochemical, cellular, and molecular biology point of views. The meetings were longer than traditional seminars, containing a part with scientific debate and other with a humanization or deconstruction of the researcher including trajectory, hobbies, scientific, and social thoughts. To facilitate learning and conceptualization, the seminars were available through YouTube and we applied weekly questionnaires to be answered rescuing scientific and motivational topics to give companionship and support to the students in pandemic times. Here, we are defending the creation of permanent platforms for scientific diffusion, with higher accessibility, connecting centers of different levels and giving academic excellence and opportunities for young researchers. Feedback received from participants indicates that this seminar structure can increase confidence and improve their perception of scientific processes and inspire researchers with development trajectories. We have discussed multidisciplinarity, scientific excellence, regional isolation and economic inequality, integration, humanization, and the value of science in society.

在一个学期中,在社会隔离和疫情的限制下,我们在巴西南部库里蒂巴的一个研究生课程中每周组织多学科研讨会,将来自巴西和南美洲不同地区的学生聚集在一起。来自巴西、德国、法国、阿根廷、墨西哥、葡萄牙、英国和美国机构的杰出研究人员从免疫学、药理学、生物化学、细胞和分子生物学的角度就慢性和传染病问题举行了研讨会。这些会议比传统的研讨会要长,其中一部分是科学辩论,另一部分是对研究人员的人性化或解构,包括轨迹、爱好、科学和社会思想。为了促进学习和概念化,我们通过YouTube提供了研讨会,我们每周使用问卷调查,让学生回答拯救科学和励志主题,以便在大流行时期陪伴和支持学生。在这里,我们捍卫科学传播的永久平台的创建,具有更高的可达性,连接不同层次的中心,为年轻的研究人员提供学术卓越和机会。与会者的反馈表明,这种研讨会结构可以增强信心,改善他们对科学过程的感知,并为研究人员提供发展轨迹的启发。我们讨论了多学科、科学卓越、区域隔离和经济不平等、一体化、人性化以及科学在社会中的价值。
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引用次数: 0
Identifying entrustable professional activities for MD program in biochemistry—A modified Delphi approach 确定生物化学医学博士项目可信赖的专业活动——一种改进的德尔菲法
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-05-06 DOI: 10.1002/bmb.21736
Sujatha Rajaragupathy, Sumitra Govindarajan, Jeyachandran Ganesan, Kavitha Subramanian, Vijaya Doraiswamy, Gayathri Balasubramaniam, Meenakshi Sundaram Andra Suryanarayana, Aruna Veeruswamy

Entrustable professional activities (EPAs) facilitate competency-based assessments. India is on the verge of implementing competency-based training for postgraduate programs. MD degree in Biochemistry is a unique program available exclusively in India. Postgraduate programs in most specialties have started working toward EPA-based curriculum, in both India and other countries. However, EPAs for MD Biochemistry course are yet to be defined. This study aims to identify EPAs for postgraduate training program in Biochemistry. Identification and attaining consensus on the list of EPAs for MD Biochemistry curriculum was done by modified Delphi method. The study was conducted in three rounds. In round 1, tasks expected from an MD Biochemistry graduate were identified by working group followed by expert panel validation. The tasks were organized and reframed to EPAs. Two rounds of online survey were conducted to achieve a consensus on the list of EPAs. Consensus measure was calculated. A cut-off value of 80% and above was considered to reflect good consensus. The working group identified 59 tasks. This was validated by 10 experts based on which, 53 items were retained. These tasks were reframed into 27 EPAs. In round 2, 11 EPAs achieved good consensus. Among the remaining EPAs, 13 achieved consensus of 60%–80% and were selected for round 3. Five EPAs achieved good consensus in this round. A total of 16 EPAs were identified for MD Biochemistry curriculum. This study provides a frame of reference for experts to develop an EPA-based curriculum in the future.

可信赖的专业活动(EPAs)促进了基于能力的评估。印度即将在研究生课程中实施以能力为基础的培训。在生物化学博士学位是一个独特的计划,专门在印度提供。在印度和其他国家,大多数专业的研究生课程已经开始向epa为基础的课程发展。然而,医学博士生物化学课程的EPAs尚未明确。本研究旨在确定生物化学研究生培养计划的epa。采用改进的德尔菲法,对医学博士生物化学课程EPAs列表进行了鉴定,并取得了共识。这项研究分三轮进行。在第一轮中,工作小组确定了生物化学博士毕业生的任务,然后由专家小组验证。这些任务被组织并重新定义为EPAs。我们进行了两轮网上调查,就环境保护措施名单达成共识。计算共识测度。临界值在80%及以上被认为反映了良好的共识。工作组确定了59项任务。经过10位专家的验证,保留了53个项目。这些任务被重组为27个环境方案。第二轮11个epa达成了良好共识。在其余的环境保护计划中,有13个达成了60%-80%的共识,并被选中进入第三轮。本轮会议达成了5个环境保护协定的良好共识。共确定了医学博士生物化学课程的16个EPAs。本研究为未来专家开发环境保护课程提供参考框架。
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引用次数: 0
Examination performance with flipped classroom as instructional strategy in the carbohydrate metabolism course unit at a Philippine medical school: Estimation of average treatment effect from observational data 菲律宾一所医学院碳水化合物代谢课程单元以翻转课堂为教学策略的考试表现:从观察数据估计平均治疗效果
IF 1.4 4区 教育学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-05-06 DOI: 10.1002/bmb.21740
Michael Van Haute, Jan David Monzon

While the innovativeness of the flipped classroom (FC) approach promotes active participation and higher-order thinking among students, there are concerns about its effectiveness in terms of knowledge retention. Currently, there are no studies involving medical school biochemistry that evaluate this aspect of effectiveness. Thus, we conducted a historical control study that analyzed observational data from two freshman batches of the Doctor of Medicine program in our institution. Class 2021 (n = 250) served as the traditional lecture (TL) group while Class 2022 (n = 264) served as the FC group. Data on relevant observed covariates (age, sex, National Medical Admission Test or NMAT score, undergraduate degree) and the outcome variable (carbohydrate metabolism course unit examination percentage scores, as indicator of knowledge retention) were included in the analysis. Propensity scores were calculated using logit regression conditional on these observed covariates. Afterwards, 1:1 nearest-neighbor propensity score matching (PSM) was performed to produce an estimated average treatment effect (ATE) measure afforded by FC (as adjusted mean difference in examination scores between the two batches), balancing on the covariates. Nearest-neighbor matching using the calculated propensity scores effectively balanced the two groups (standardized bias <10%), producing 250 matched student-pairs that received either TL or FC. Following PSM, the FC group was found to have a significantly higher adjusted mean examination score compared to the TL group (adjusted mean difference = 5.62%, 95% CI: 2.54%, 8.72%; p < 0.001). Using this approach, we were able to demonstrate benefit of FC over TL in terms of knowledge retention, as reflected by the estimated ATE.

虽然翻转课堂的创新性促进了学生的积极参与和高阶思维,但其在知识保留方面的有效性令人担忧。目前,还没有涉及医学院生物化学的研究来评估这方面的有效性。因此,我们进行了一项历史对照研究,分析了我们机构两批医学博士项目的观察数据。2021班(n = 250)作为传统讲座(TL)组,2022班(n = 264)作为FC组。相关观察协变量(年龄、性别、国家医学入学考试或NMAT成绩、本科学位)和结局变量(碳水化合物代谢课程单元考试百分比分数,作为知识保留的指标)的数据被纳入分析。倾向分数计算使用logit回归条件下,这些观察到的协变量。之后,进行1:1的最近邻倾向得分匹配(PSM),以产生FC提供的估计平均治疗效果(ATE)测量(作为两批考试分数的调整平均差异),平衡协变量。使用计算出的倾向得分的最近邻匹配有效地平衡了两组(标准化偏差<10%),产生250对匹配的学生对,他们要么接受TL,要么接受FC。PSM后,FC组的调整平均检查得分明显高于TL组(调整平均差异= 5.62%,95% CI: 2.54%, 8.72%;p < 0.001)。使用这种方法,我们能够证明FC在知识保留方面优于TL,正如估计的ATE所反映的那样。
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