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Adenovirus receptors on antigen-presenting cells of the skin 皮肤抗原呈递细胞上的腺病毒受体
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-07-30 DOI: 10.1111/boc.202200043
Elina Gerber-Tichet Dienst, Eric J. Kremer

Skin, the largest human organ, is part of the first line of physical and immunological defense against many pathogens. Understanding how skin antigen-presenting cells (APCs) respond to viruses or virus-based vaccines is crucial to develop antiviral pharmaceutics, and efficient and safe vaccines. Here, we discuss the way resident and recruited skin APCs engage adenoviruses and the impact on innate immune responses.

皮肤是人体最大的器官,是抵御许多病原体的第一道物理和免疫防线的一部分。了解皮肤抗原提呈细胞(apc)如何对病毒或基于病毒的疫苗作出反应,对于开发抗病毒药物以及高效和安全的疫苗至关重要。在这里,我们讨论常驻和招募皮肤apc参与腺病毒的方式和对先天免疫反应的影响。
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引用次数: 1
Ezrin and CD44 participate in the internalization process of Coxiella burnetii into non-phagocytic cells Ezrin和CD44参与伯纳氏杆菌进入非吞噬细胞的内化过程
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-07-19 DOI: 10.1111/boc.202100096
Jesús S. Distel, Rodolfo M. Ortiz Flores, Arthur Bienvenu, Milton O. Aguilera, Matteo Bonazzi, Walter Berón

Ezrin protein is involved in the interaction of actin cytoskeleton with membrane receptors such as CD44. It regulates plasma membrane dynamics and intracellular signaling. Coxiella burnetii, the etiologic agent of Q fever, is internalized into host cell through a poorly characterized molecular mechanism. Here we analyzed the role of ezrin and CD44 in the C. burnetii internalization by HeLa cells. The knockdown of ezrin and CD44 inhibited the bacterial uptake. Interestingly, at early stages of C. burnetii internalization, ezrin was recruited to the cell membrane fraction and phosphorylated. Moreover, the overexpression of non-phosphorylatable and phosphomimetic ezrin mutants decreased and increased the bacterial entry, respectively. A decrease in the internalization of C. burnetii was observed by the overexpression of CD44 truncated forms containing the intracellular or the extracellular domains. Interestingly, the CD44 mutant was unable to interact with ERM proteins decreased the bacterial internalization. These findings demonstrate the participation of ezrin in the internalization process of C. burnetii in non-phagocytic cells. Additionally, we present evidence that CD44 receptor would be involved in that process.

Ezrin蛋白参与肌动蛋白细胞骨架与膜受体(如CD44)的相互作用。它调节质膜动力学和细胞内信号。伯纳蒂克希菌是Q热的病原,其内化进入宿主细胞的分子机制尚不明确。我们分析了ezrin和CD44在HeLa细胞内化burnetii中的作用。敲低ezrin和CD44抑制细菌摄取。有趣的是,在伯氏梭菌内化的早期阶段,ezrin被招募到细胞膜部分并磷酸化。此外,非磷酸化和拟磷酸化ezrin突变体的过表达分别减少和增加了细菌的进入。通过过度表达含有细胞内或细胞外结构域的CD44截断形式,可以观察到伯氏梭菌内化的减少。有趣的是,CD44突变体不能与ERM蛋白相互作用,减少了细菌内化。这些发现表明ezrin参与了伯氏梭菌在非吞噬细胞中的内化过程。此外,我们提出的证据表明,CD44受体可能参与这一过程。
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引用次数: 2
Extracellular vesicles containing the I-BAR protein IRSp53 are released from the cell plasma membrane in an Arp2/3 dependent manner 含有I-BAR蛋白IRSp53的细胞外囊泡以Arp2/3依赖的方式从细胞膜释放
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-07-17 DOI: 10.1111/boc.202100095
Aurore de Poret, Rayane Dibsy, Peggy Merida, Alice Trausch, Kaushik Inamdar, Delphine Muriaux

Backgroud

Extracellular vesicles (EVs) are nanometric membrane vesicles produced by cells and involved in cell–cell communication. EV formation can occur in endosomal compartments whose budding depends on the ESCRT machinery (i.e., exosomes), or at the cell plasma membrane (i.e., EVs or microvesicles). How these EVs bud from the cell plasma membrane is not completely understood. Membrane curvatures of the plasma membrane toward the exterior are often generated by I-BAR domain proteins. I-BAR proteins are cytosolic proteins that when activated bind to the cell plasma membrane and are involved in protrusion formation including filopodia and lamellipodia. These proteins contain a conserved I-BAR domain that senses curvature and induces negative membrane curvatures at the plasma membrane. I-BAR proteins, such as IRSp53, also interact with actin co-factors to favor membrane protrusions.

Results

Here, we explore whether the I-BAR protein IRSp53 is sorting with EVs and if ectopic GFP-tagged I-BAR proteins, such as IRSp53-GFP, as well as related IRTKS-GFP or Pinkbar proteins, can be found in these EVs originated from the cell plasma membrane. We found that a subpopulation of these I-BAR EVs, which are negative for the CD81 exosomal biomarker, are produced from the cell plasma membrane in a TSG101-independent manner but in an Arp2/3-dependent manner.

Conclusions

Our results thus reveal that IRSp53 containing EVs represent a subset of plasma membrane EVs whose production depends on branched actin.

Significance

IRSp53 belongs to the I-BAR family proteins involved in curving cell membranes through a link with cortical actin. In that perspective, IRSp53 was shown to help membrane curvature of HIV-1 particles and, here, to be part of the budding process of a sub-population of EVs through its link with Arp2/3. IRSp53 is consequently a biomarker of these EVs of the cell plasma membrane.

细胞外囊泡(EVs)是细胞产生并参与细胞间通讯的纳米膜囊泡。囊泡的形成可以发生在内体腔室,其出芽取决于ESCRT机制(即外泌体),也可以发生在细胞膜(即囊泡或微泡)。这些电动汽车是如何从细胞质膜发芽的还不完全清楚。质膜向外的膜曲率通常是由I-BAR结构域蛋白产生的。I-BAR蛋白是一种胞质蛋白,当被激活时,它与细胞膜结合,并参与包括丝状足和板足在内的突起形成。这些蛋白含有一个保守的I-BAR结构域,该结构域感知曲率并在质膜处诱导负膜曲率。I-BAR蛋白,如IRSp53,也与肌动蛋白辅助因子相互作用,有利于膜突出。本研究探讨了I-BAR蛋白IRSp53是否与EVs分选,以及是否可以在这些源自细胞膜的EVs中发现异位gfp标记的I-BAR蛋白,如IRSp53- gfp,以及相关的IRTKS-GFP或Pinkbar蛋白。我们发现这些I-BAR ev的一个亚群,CD81外泌体生物标志物阴性,以tsg101独立的方式从细胞膜产生,但以arp2 /3依赖的方式产生。因此,我们的研究结果表明,含有IRSp53的ev是质膜ev的一个子集,其产生依赖于支链肌动蛋白。IRSp53属于I-BAR家族蛋白,通过与皮质肌动蛋白的联系参与细胞膜弯曲。从这个角度来看,IRSp53被证明有助于HIV-1颗粒的膜曲率,并且通过其与Arp2/3的联系,成为ev亚群出芽过程的一部分。因此,IRSp53是细胞膜上这些ev的生物标志物。
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引用次数: 5
HIV-1 Nef hijacks both exocytic and endocytic pathways of host intracellular trafficking through differential regulation of Rab GTPases HIV‐1 Nef通过Rab GTP酶的差异调节劫持宿主细胞内运输的胞外和胞内途径
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-06-17 DOI: 10.1111/boc.202100027
Sushila Kumari, Prasanta K. Dash, Tripti Kumari, Ming-Lei Guo, Jimut Kanti Ghosh, Shilpa J. Buch, Raj Kamal Tripathi

Background

HIV-1 Nef regulates several cellular functions in an infected cell which results in viral persistence and AIDS pathogenesis. The currently understood molecular mechanism(s) underlying Nef-dependent cellular function(s) are unable to explain how events are coordinately regulated in the host cell. Intracellular membranous trafficking maintains cellular homeostasis and is regulated by Rab GTPases - a member of the Ras superfamily.

Results

In the current study, we tried to decipher the role of Nef on the Rab GTPases-dependent complex and vesicular trafficking. Expression profiling of Rabs in Nef-expressing cells showed that Nef differentially regulates the expression of individual Rabs in a cell-specific manner. Further analysis of Rabs in HIV-1NL4-3 or ΔNef infected cells demonstrated that the Nef protein is responsible for variation in Rabs expression. Using a panel of competitive peptide inhibitors against Nef, we identified the critical domain of HIV-1 Nef involved in modulation of Rabs expression. The molecular function of Nef-mediated upregulation of Rab5 and Rab7 and downregulation of Rab11 increased the transport of SERINC5 from the cell surface to the lysosomal compartment. Moreover, the Nef-dependent increase in Rab27 expression assists exosome release. Reversal of Rabs expression using competitive inhibitors against Nef and manipulation of Rabs expression reduced viral release and infectivity of progeny virions.

Conclusion

This study demonstrates that Nef differentially regulates the expression of Rab proteins in HIV-1 infected cells to hijack the host intracellular trafficking, which augments viral replication and HIV-1 pathogenesis.

Significance

Our study emphasized the indispensable role of HIV-1 protein Nef on various aspects of the intracellular trafficking regulated by Rabs GTPases, which explained how HIV-1 Nef may hijack membrane trafficking pathways in infected cells.

HIV‐1 Nef调节感染细胞的几种细胞功能,导致病毒持续存在和艾滋病发病机制。目前所了解的Nef依赖性细胞功能的分子机制无法解释宿主细胞中事件是如何协调调节的。细胞内膜运输维持细胞稳态,并受Ras超家族成员Rab GTP酶的调节。
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引用次数: 0
Low-density cell culture enhances hepatic function through tight junction formation in HepG2 cells 低密度细胞培养通过在HepG2细胞中形成紧密连接来增强肝功能
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-05-23 DOI: 10.1111/boc.202200002
Rieko Tanaka-Yachi, Kazuko Aizawa, Kie shimizu, Hidenori Akutsu, Kazuaki Nakamura

Background Information

An in vitro evaluation system using cultured hepatocytes is the most useful method in preclinical research, such as drug metabolism and toxicity test. Human hepatocytes should be used in an in vitro evaluation system because the expression of drug-metabolizing enzymes varies among animal species. HepG2 cells, a liver cancer-derived cell line, are widely used as a human hepatocyte model; however, their hepatic functions are generally weak.

Results

In this study, we showed that low-density HepG2 cell culture induces hepatic function. The morphology of HepG2 cells was altered depending on the cell density at the time of seeding. Low-density cultured HepG2 cells proliferated as tightly packed colonies. The HepG2 cell colonies in low-density culture demonstrated enhanced tight junction formation. Tight junction protein gene expression levels, such as those of zonula occludens-1 (ZO-1), junctional adhesion molecule 1 (JAM), claudin, occludin, and tricellulin, increased in low-density cultured HepG2 cells. Phases I and II metabolic enzymes, phase III transporter gene expression, and CYP3A4 activity also increased in low-density cultured HepG2 cells. Occludin and tricellulin knockdown inhibited the increased hepatic function in low-density cultures. Tricellulin knockdown reduced the expression of hepatocyte nuclear factor 6 (HNF6), CCAAT/enhancer-binding protein alpha (CEBPA), and aryl hydrocarbon receptor (AHR). In addition, the expression of nuclear receptor subfamily 1 group h member 2 (NR1H2) increased in low-density cultures, canceled by occludin and tricellulin knockdown.

Conclusions

Our results suggest that low-density HepG2 cell cultures enhance hepatic function by promoting tight junction formation and demonstrate the importance of cell density in drug evaluation using hepatocyte cell lines.

体外培养肝细胞评价系统是药物代谢和毒性试验等临床前研究中最有用的方法。人肝细胞应该用于体外评价系统,因为药物代谢酶的表达在动物物种中是不同的。HepG2细胞是一种肝癌来源的细胞系,被广泛用作人类肝细胞模型;然而,他们的肝功能普遍较弱。
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引用次数: 0
Coordination between phospholipid pools and DNA damage sensing 磷脂库与DNA损伤传感的协同作用
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-05-07 DOI: 10.1111/boc.202200007
Sara Ovejero, Caroline Soulet, Sylvain Kumanski, María Moriel-Carretero

Background

Both phospholipid synthesis and the detection of DNA damage are coupled to cell cycle progression, yet whether these two aspects crosstalk to each other remains unassessed. We postulate here that shortage of phospholipids, which negatively affects proliferation, may reduce the need for checkpoint activation in response to DNA damage.

Results

To test this hypothesis, we explore here the DNA Damage Response activation in response to seven different genotoxins, in three distinct cell types, and manipulate phospholipid synthesis both pharmacologically and genetically. This allows us to point at the DNA damage response kinase ATR as responsible for the coordination between phospholipid levels and DNA damage sensing.

Conclusions and Significance

ATR could combine its ability to sense DNA damage and phospholipid profiles in order to finetune the response to DNA lesions depending on metabolic cues. Further, our analysis reveals the functional significance of this crosstalk to keep genome homeostasis.

磷脂合成和DNA损伤检测都与细胞周期进展相关,但这两个方面是否相互串扰仍未得到评估。我们在这里假设,磷脂的缺乏会对增殖产生负面影响,可能会减少对DNA损伤时检查点激活的需求。
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引用次数: 5
3D FIB-SEM structural insights into the architecture of sub-pellicular microtubules of Trypanosoma cruzi epimastigotes 三维FIB - SEM结构洞察克氏锥虫表皮下微管的结构
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-04-27 DOI: 10.1111/boc.202100038
Juliana C. Vidal, Wanderley De Souza

Background information

Trypanosomatidae, which includes eukaryotic species agents of diseases like leishmaniasis, sleeping sickness, and Chagas disease, have special structures and organelles not found in mammalian cells. They present a layer of microtubules, known as subpellicular microtubules (SPMT), located underneath the plasma membrane and responsible for preserving cell morphology, cell polarity, the position of single copy organelles, and morphological changes that occur throughout the protozoan life cycle. Even though a lot of knowledge about the SPMT is available, we still do not know exactly how each microtubule in the system is organized in three dimensions. Here, we use focused ion beam scanning electron microscopy (FIB-SEM) to analyze the tridimensional organization of epimastigotes SPMT.

Results

The high-resolution 3D analyses revealed that certain microtubules of the SPMT end more prematurely than the neighboring ones.

Conclusions

These microtubules could (1) be shorter or (2) have the same length as the neighboring ones, assuming that those end up earlier at their other end, might be treadmilling/catastrophe events that have not yet been described in trypanosomatids.

锥虫科,包括真核物种病原体,如利什曼病、昏睡病和恰加斯病,具有哺乳动物细胞中没有的特殊结构和细胞器。它们呈现出一层微管,称为膜下微管(SPMT),位于质膜下方,负责保存细胞形态,细胞极性,单拷贝细胞器的位置以及整个原生动物生命周期中发生的形态变化。尽管我们对SPMT有很多了解,但我们仍然不知道系统中的每个微管是如何在三维空间中组织的。本文利用聚焦离子束扫描电子显微镜(FIB - SEM)分析了附生毛石SPMT的三维组织结构。
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引用次数: 2
Contributions of Andrée Tixier-Vidal (1923–2021) to modern cell biology Andrée Tixier‐Vidal(1923–2021)对现代细胞生物学的贡献
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-04-11 DOI: 10.1111/boc.202200020
Claude Tougard, Thierry Galli, Bruno Goud

This article illustrates the main stages of the scientific career of Dr Andrée Tixier–Vidal, a pioneer in cell biology research in France. She made important discoveries in the field of hormone secretion and neuronal morphogenesis. She played a key role in developing pituitary and neuronal cultures and using electron microscopy to study cellular structures. Her scientific influence continues to irradiate through her students and collaborators.

本文阐述了法国细胞生物学研究先驱Andrée Tixier–Vidal博士科学生涯的主要阶段。她在激素分泌和神经元形态发生领域有重要发现。她在开发垂体和神经元培养物以及使用电子显微镜研究细胞结构方面发挥了关键作用。她的科学影响力继续在她的学生和合作者中传播。
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引用次数: 0
The magic of MAGI-1: A scaffolding protein with multi signalosomes and functional plasticity MAGI-1的神奇之处:一种具有多信号体和功能可塑性的支架蛋白。
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-04-07 DOI: 10.1111/boc.202200014
Katherine J. D. A. Excoffon, Christina L. Avila, Mahmoud S. Alghamri, Abimbola O. Kolawole

MAGI-1 is a critical cellular scaffolding protein with over 110 different cellular and microbial protein interactors. Since the discovery of MAGI-1 in 1997, MAGI-1 has been implicated in diverse cellular functions such as polarity, cell–cell communication, neurological processes, kidney function, and a host of diseases including cancer and microbial infection. Additionally, MAGI-1 has undergone nomenclature changes in response to the discovery of an additional PDZ domain, leading to lack of continuity in the literature. We address the nomenclature of MAGI-1 as well as summarize many of the critical functions of the known interactions. Given the importance of many of the interactors, such as human papillomavirus E6, the Coxsackievirus and adenovirus receptor (CAR), and PTEN, the enhancement or disruption of MAGI-based interactions has the potential to affect cellular functions that can potentially be harnessed as a therapeutic strategy for a variety of diseases.

MAGI-1是一种重要的细胞支架蛋白,具有110多种不同的细胞和微生物蛋白相互作用因子。自1997年发现MAGI-1以来,MAGI-1与多种细胞功能有关,如极性、细胞间通讯、神经过程、肾功能以及包括癌症和微生物感染在内的多种疾病。此外,由于发现了额外的PDZ结构域,MAGI-1的命名发生了变化,导致文献缺乏连续性。我们讨论了MAGI-1的命名,并总结了已知相互作用的许多关键功能。鉴于许多相互作用因子的重要性,如人乳头瘤病毒E6、柯萨奇病毒和腺病毒受体(CAR)以及PTEN,基于MAGI的相互作用的增强或破坏有可能影响细胞功能,这些功能可能被用作多种疾病的治疗策略。
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引用次数: 2
Site-specific N-glycan profiles of α5β1 integrin from rat liver 大鼠肝脏α5β1整合素的位点特异性N聚糖谱
IF 2.7 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-03-19 DOI: 10.1111/boc.202200017
Ekaterina Mirgorodskaya, Estelle Dransart, Massiullah Shafaq-Zadah, Daniel Roderer, Carina Sihlbom, Hakon Leffler, Ludger Johannes

Background Information

Like most other cell surface proteins, α5β1 integrin is glycosylated, which is required for its various activities in ways that mostly remain to be determined.

Results

Here, we have established the first comprehensive site-specific glycan map of α5β1 integrin that was purified from a natural source, that is, rat liver. This analysis revealed striking site selective variations in glycan composition. Complex bi, tri, or tetraantennary N-glycans were predominant at various proportions at most potential N-glycosylation sites. A few of these sites were nonglycosylated or contained high mannose or hybrid glycans, indicating that early N-glycan processing was hindered. Almost all complex N-glycans had fully galactosylated and sialylated antennae. Moderate levels of core fucosylation and high levels of O-acetylation of NeuAc residues were observed at certain sites. An O-linked HexNAc was found in an EGF-like domain of β1 integrin. The extensive glycan information that results from our study was projected onto a map of α5β1 integrin that was obtained by homology modeling. We have used this model for the discussion of how glycosylation might be used in the functional cycle of α5β1 integrin. A striking example concerns the involvement of glycan-binding galectins in the regulation of the molecular homeostasis of glycoproteins at the cell surface through the formation of lattices or endocytic pits according to the glycolipid-lectin (GL-Lect) hypothesis.

Conclusion

We expect that the glycoproteomics data of the current study will serve as a resource for the exploration of structural mechanisms by which glycans control α5β1 integrin activity and endocytic trafficking.

Significance

Glycosylation of α5β1 integrin has been implicated in multiple aspects of integrin function and structure. Yet, detailed knowledge of its glycosylation, notably the specific sites of glycosylation, is lacking. Furthermore, the α5β1 integrin preparation that was analyzed here is from a natural source, which is of importance as there is not a lot of literature in the field about the glycosylation of “native” glycoproteins.

与大多数其他细胞表面蛋白一样,α5β1整合素是糖基化的,这是其各种活性所必需的,其方式大多有待确定。
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引用次数: 1
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Biology of the Cell
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