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Tempo-defined resilience: Early Bacillus amyloliquefaciens F11 application reshapes rhizosphere microbiome to suppress tobacco bacterial wilt 时间定义的弹性:早期解淀粉芽孢杆菌F11应用重塑根际微生物群抑制烟草细菌性枯萎病
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-28 DOI: 10.1016/j.biocontrol.2025.105954
Ji Yang , Hainian Chen , Chaowen Li , Benfu Cao , Xianghong Zeng , Xiang Li , Shengliang Zhang , Yingang Lu , Li Liu , Sanwei Yang
Therapeutic application of Bacillus amyloliquefaciens F11 during initial symptom onset suppressed tobacco bacterial wilt with 32 % control efficacy, outperforming both diseased controls and streptomycin treatment. STAMP analysis revealed that F11 treatments (B and I) substantially reduced key pathogens including Ralstonia and Acidobacterium, a suppression not achieved by streptomycin. The biocontrol mechanism likely combined direct pathogen suppression targeting Ralstonia solanacearum and Aquicella with enrichment of beneficial taxa including Stenotrophomonas and Rhizobium, leading to structural reorganization of the rhizosphere microbiome as confirmed by β-diversity shifts (PERMANOVA, P = 0.001). Our comparative indicator taxa analysis identified eight microbial indicators, including disease-suppressive members (Stenotrophomonas, Rhizobium, and Sphingobacterium), and disease-conducive guild (Ralstonia, Metallibacterium, Rhizomicrobium, Asticcacaulis, and Rhodocista), overcoming the limitations of conventional biomarker approaches LEfSe. Notably, F11 application disrupted the co-occurrence pattern between Ralstonia and Metallibacterium, indicating its capacity to interfere with potentially pathogenic associations. These findings demonstrate that temporally optimized F11 application rebuilds disease-suppressive soils through targeted microbiome restructuring, providing a sustainable alternative to chemical dependent disease management.
在症状初期施用解淀粉芽孢杆菌F11对烟草青枯病的防治效果为32%,优于对照和链霉素治疗。STAMP分析显示,F11处理(B和I)显著减少了包括Ralstonia和Acidobacterium在内的关键病原体,这是链霉素没有达到的抑制作用。其生物防治机制可能结合了直接抑制病原菌的拮抗作用,同时丰富了窄养单胞菌和根瘤菌等有益类群,导致根际微生物群的结构重组,β-多样性变化证实了这一点(PERMANOVA, P = 0.001)。我们的比较指标分类群分析确定了8个微生物指标,包括疾病抑制成员(窄养单胞菌,根瘤菌和Sphingobacterium)和疾病促进成员(Ralstonia, Metallibacterium, Rhizomicrobium, Asticcacaulis和Rhodocista),克服了传统生物标志物方法LEfSe的局限性。值得注意的是,F11的施用破坏了Ralstonia和Metallibacterium的共生模式,表明其能够干扰潜在的致病关联。这些发现表明,暂时优化的F11施用可以通过有针对性的微生物群重组重建疾病抑制土壤,为依赖化学物质的疾病管理提供可持续的替代方案。
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引用次数: 0
Indirect effects of beneficial fungal treatments on pest insects can vary with plant genotype and spore viability 有益真菌处理对害虫的间接影响可能因植物基因型和孢子活力而异
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-24 DOI: 10.1016/j.biocontrol.2025.105953
Cesar U. Valencia , Janaina C.S. Cunha , Loren Rivera-Vega , Gregory A. Sword
Fungal entomopathogens as biopesticides are typically applied as foliar sprays and assessed for their insecticidal activity. However, plant responses to these microbial treatments remain poorly understood. Additionally, environmental conditions such as desiccation and UV exposure can reduce spore viability, resulting in both live and dead spores serving as potential elicitors of plant responses. Whether foliar treatments with viable or dead fungal spores influence cotton defenses against the cotton aphid, Aphis gossypii, was studied. Spores of Beauveria bassiana, Phialemonium inflatum, and Chaetomium globosum were tested on two cotton genotypes for effects on aphid reproduction. Viable spores did not alter aphid population growth on either genotype. In contrast, dead spores significantly increased aphid populations on one genotype. Treatments with plant defense elicitors, Methyl Jasmonate and Actigard 50WG, increased aphid populations to levels observed with heat-killed spore treatments, suggesting that dead spores may activate plant defense pathways that inadvertently benefit aphids. Foliar application of chitosan, a proxy for fungal chitin, further indicated that plant genotype-specific responses to Microbe-Associated Molecular Patterns (MAMPs) likely underlie the observed differential aphid responses. Together, these findings demonstrate that heat-killed fungal spores can modulate plant defenses, thereby influencing the performance of insect herbivores. Our results highlight how beneficial fungal applications may alter host plant suitability by inducing plant defense pathways, potentially with unintended consequences for insect pest populations.
真菌昆虫病原体作为生物农药通常作为叶面喷雾剂施用,并评估其杀虫活性。然而,植物对这些微生物处理的反应仍然知之甚少。此外,干燥和紫外线暴露等环境条件会降低孢子的活力,导致活孢子和死孢子都成为植物反应的潜在促子。研究了活孢子和死孢子叶面处理对棉花抗棉蚜能力的影响。研究了球孢白僵菌、膨胀球毛霉和球毛霉孢子在棉花上对蚜虫繁殖的影响。活孢子对两种基因型的蚜虫种群生长均无影响。相反,死孢子在一个基因型上显著增加蚜虫的数量。用植物防御激发子茉莉酸甲酯和Actigard 50WG处理后,蚜虫数量增加到热杀孢子处理时的水平,这表明死孢子可能激活植物防御途径,无意中有利于蚜虫。壳聚糖(真菌甲壳素的代用物)的叶面施用进一步表明,植物对微生物相关分子模式(Microbe-Associated Molecular Patterns, MAMPs)的基因型特异性反应可能是观察到的蚜虫差异反应的基础。总之,这些发现表明,热杀真菌孢子可以调节植物防御,从而影响昆虫食草动物的性能。我们的研究结果强调了有益的真菌应用如何通过诱导植物防御途径改变寄主植物的适应性,可能对害虫种群产生意想不到的后果。
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引用次数: 0
Bioprotectants for the suppression of Ascochyta rabiei infection and inoculum production on chickpea (Cicer arietinum) 生物保护剂抑制鹰嘴豆感染及接种量的研究
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-16 DOI: 10.1016/j.biocontrol.2025.105950
Melanie Bullock , Bounnaliam Thammavongsa , Luke G. Barrett , Mohamed Cassim Mohamed Zakeel , Louise F. Thatcher , Susan J. Sprague
Ascochyta blight, caused by the fungal pathogen Ascochyta rabiei, is one of the most widespread and devastating diseases affecting chickpeas globally. In Australia, protection against disease and yield loss is heavily reliant on synthetic fungicides, with implications for resistance development and environmental damage. Bioprotectants such as microbial biological control agents (BCAs) and biopesticides may provide alternatives to synthetic fungicides, however their efficacy against the current aggressive strains of A. rabiei on chickpea plants is unknown. Here we assessed representative bioprotectants for their ability to limit A. rabiei growth in vitro, as well as disease development and subsequent conidial spore inoculum load on chickpea seedlings under glasshouse conditions. Treatments included a strain of Bacillus amyloliquefaciens and a Streptomyces species, the fungus Trichoderma harzianum, a biofungicide formulation derived from Streptomyces, and synthetic fungicide controls. All bioprotectants demonstrated some level of A. rabiei growth suppression in vitro. However, only the biofungicide effectively reduced in planta disease development and conidial spore production, with a 48 % and 88 % reduction in stem disease severity and stem lesion lengths respectively compared to the control, comparable to levels achieved with synthetic fungicides. In a second in planta experiment, pre-treatment of plants with B. amyloliquefaciens 1 week prior to A. rabiei inoculation (compared to 24 h in experiment 1) suppressed stem lesion development, suggesting application timing may be crucial for optimising BCA efficacy. In view of efforts to reduce synthetic fungicide use and promote durable and sustainable integrated disease management strategies for Ascochyta blight control in chickpea, our findings identify bioprotectants such as the Streptomyces-derived biofungicide as candidates for evaluation under field conditions.
鹰嘴豆枯萎病是由真菌病原体引起的,是影响全球鹰嘴豆最广泛和最具破坏性的疾病之一。在澳大利亚,预防疾病和产量损失严重依赖于合成杀菌剂,这对耐药性的发展和环境破坏产生了影响。微生物生物防治剂(bca)和生物农药等生物保护剂可能是合成杀菌剂的替代品,但它们对目前鹰嘴豆植物上具有侵略性的拉贝伊弧菌的效果尚不清楚。在这里,我们评估了代表性的生物保护剂在温室条件下对鹰嘴豆苗的体外生长、疾病发展和随后的分生孢子接种负荷的限制能力。处理包括一株解淀粉芽孢杆菌和一种链霉菌、一种真菌哈茨木霉、一种从链霉菌中提取的生物杀菌剂制剂和合成杀菌剂对照。所有生物保护剂在体外均表现出一定程度的抑制rabiei生长的作用。然而,只有生物杀菌剂有效地减少了植物的疾病发展和分生孢子的产生,与对照相比,茎疾病严重程度和茎损伤长度分别减少了48%和88%,与合成杀菌剂达到的水平相当。在第二项植物试验中,与实验1中的24小时相比,在接种解淀粉芽孢杆菌前1周对植物进行预处理抑制了茎损伤的发展,这表明施用时间可能是优化BCA效果的关键。鉴于减少合成杀菌剂的使用和促进持久和可持续的鹰嘴豆疫病综合防治策略的努力,我们的研究结果确定了链霉菌衍生的生物杀菌剂等生物保护剂作为田间条件下评价的候选物。
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引用次数: 0
Growth-promoting and biocontrol features of Pantoea ananatis BRT175 in tomato 番茄Pantoea ananatis BRT175的促生抑菌特性研究
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-15 DOI: 10.1016/j.biocontrol.2025.105949
Simon Duchateau , Célia Borrego , Sonia Verdelet , Stéphan Dorey , Aziz Aziz , Sandrine Dhondt-Cordelier , Charles Gauthier , Éric Déziel , Sylvain Cordelier , Jérôme Crouzet
Beneficial bacteria belonging to Pantoea spp. and their interactions with plants have recently attracted growing interest for their beneficial effects, especially in promoting plant growth and health. In this study, we evaluated the growth-promoting and induced resistance activities of Pantoea ananatis strain BRT175 in tomato. In vitro assays revealed that this strain exhibits different beneficial traits, including phosphate solubilization, siderophore production, and IAA synthesis. These traits were further supported in silico by the presence of corresponding genes annotated in P. ananatis BRT175 genome. The capacity of this strain to significantly promote tomato growth was demonstrated under both growth chamber and greenhouse conditions. This bacterium also showed significant biocontrol activity through its antifungal effect against Botrytis cinerea. Interestingly, P. ananatis BRT175-derived ananatosides, a group of amphiphilic glycolipids, also showed an antifungal effect against B. cinerea. These glycolipids could therefore act as bacterial determinants contributing to protection against the pathogen. In addition, both root and leaf treatments with the bacterium resulted in a significant reduction of necrotic symptoms, suggesting that P. ananatis BRT175 potentially triggers systemic resistance of tomato. At the leaf level, P. ananatis BRT175 may displays a multifaceted protective effect by combining antifungal properties, competition for nutrients, and stimulation of tomato systemic resistance.
Pantoea属有益细菌及其与植物的相互作用近年来引起了人们越来越多的兴趣,特别是在促进植物生长和健康方面。本研究对番茄Pantoea ananatis菌株BRT175的促生长和诱导抗性活性进行了研究。体外实验表明,该菌株表现出不同的有益性状,包括磷酸增溶、铁载体生产和IAA合成。这些性状在计算机上进一步得到了P. ananatis BRT175基因组中注释的相应基因的支持。该菌株在室内和温室条件下均能显著促进番茄生长。该菌对灰霉病菌具有明显的抑菌活性。有趣的是,P. ananatis brt175衍生的ananatosides(一组两亲性糖脂)也显示出对B. cinerea的抗真菌作用。因此,这些糖脂可以作为细菌的决定因素,有助于抵御病原体。此外,用该细菌处理番茄的根和叶都能显著减少坏死症状,这表明P. ananatis BRT175可能引发番茄的系统性抗性。在叶片水平上,ananatis BRT175可能通过结合抗真菌特性、养分竞争和刺激番茄系统抗性来表现出多方面的保护作用。
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引用次数: 0
Combined applications of organic bran Fertilizer, biochar and microbial inoculants control tobacco soil-borne diseases by recruiting beneficial rhizosphere microbes and enhancing soil quality 有机麸皮肥、生物炭和微生物菌剂配施通过吸收有益根际微生物和提高土壤质量来防治烟草土传病害
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-13 DOI: 10.1016/j.biocontrol.2025.105948
Simin Zhang , Jianyu Wei , Jili Zhang , Minghui Chen , Yingying Zhang , Yixia Cai , Wei Wang
The application of green additives is an effective strategy to enhance soil health and control tobacco diseases. In this study, microbiome and metabolomics techniques were employed to investigate the mechanisms by which the combined application (SP) of organic bran fertilizer, biochar, and microbial inoculants suppresses tobacco soil-borne diseases. The results showed that SP significantly decreased the incidence of bacterial blight, black shank, and root rot by 66.58 %, 76.12 %, and 64.37 %, respectively. Soil pH, the contents of organic matter and total potassium were improved obviously, and the activities of catalase, polyphenol oxidase and invertase activities were enhanced, too. The abundance of beneficial bacterial genera, such as Sphingomonas and Bacillus, and fungal genera, including Pseudeurotium and Rhizophagus, increased significantly, whereas pathogenic genera such as Gemmatimonas and Fusarium were significantly suppressed. Bacterial functional groups associated with “peptidases and inhibitors” and fungal saprotroph-symbiotroph groups were distinctly enhanced. A total of 925 differential metabolites were identified in tobacco roots, stems, and rhizosphere soil. Lanceotoxin A increased by 119.96-fold in rhizosphere soil, with key metabolic pathways, including glucosinolates and alkaloids, activated, promoting the biosynthesis of disease-resistant metabolites such as gingerol and 12-KETE. Additionally, plant resistance was supported by Albizziin as well as by Rhizophagus and Bacillus. Structural equation modeling revealed that fungal abundance was negatively correlated with disease incidence but positively correlated with Lanceotoxin A. Soil nutrients accounted for a substantial proportion of the variation in enzyme activity and fungal community composition. Overall, SP provides a feasible and effective approach to controlling soil-borne diseases and enhancing tobacco yields through improved soil quality, regulated microbial communities, and activated host metabolic pathways.
绿色添加剂的应用是促进土壤健康和防治烟草病害的有效策略。本研究采用微生物组学和代谢组学技术,探讨有机麸皮肥、生物炭和微生物菌剂配施抑制烟草土传病害的机制。结果表明,SP显著降低了青枯病、黑胫病和根腐病的发病率,分别降低了66.58%、76.12%和64.37%。土壤pH、有机质和全钾含量均明显改善,过氧化氢酶、多酚氧化酶和转化酶活性均增强。有益菌属(鞘氨单胞菌、芽孢杆菌)和真菌属(假尿菌、食根菌)的丰度显著增加,致病菌属(双胞菌、镰刀菌)的丰度显著降低。与“肽酶和抑制剂”相关的细菌功能群和真菌腐生共生群明显增强。在烟草根、茎和根际土壤中共鉴定出925种差异代谢物。根际土壤中枪毒素A含量增加119.96倍,硫代葡萄糖苷和生物碱等关键代谢途径被激活,促进姜辣素和12-KETE等抗病代谢物的生物合成。此外,白比菌素、根噬菌和芽孢杆菌也支持植物的抗性。结构方程模型表明,真菌丰度与病害发生率呈负相关,与杉毒素a呈正相关。土壤养分在酶活性和真菌群落组成变化中占很大比例。综上所述,SP通过改善土壤质量,调节微生物群落,激活宿主代谢途径,为控制土传疾病和提高烟草产量提供了可行有效的途径。
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引用次数: 0
Functional characterization of four antimicrobial defensins in the globally invasive pest Tuta (Phthorimaea) absoluta (Lepidoptera: Gelechiidae) 四种抗微生物防御素在全球入侵害虫绝对灰蛾中的功能研究
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-13 DOI: 10.1016/j.biocontrol.2025.105944
Bo Xu , Guohui Zhang , Nannan Zhu , Jörg Romeis , Jana Collatz , Guifen Zhang , Cong Huang , Yibo Zhang , Fanghao Wan
Beauveria bassiana and Bacillus thuringiensis are widely utilized entomopathogens for biological control. Insects combat these microbial threats through the activation of innate immune defenses, with antimicrobial peptides (AMPs), particularly defensins, playing pivotal roles. Tuta (Phthorimaea) absoluta (Lepidoptera: Gelechiidae), is a rapidly spreading and highly destructive invasive tomato pest that has developed resistance to conventional insecticides. To enhance the efficacy of entomopathogens targeted by AMPs, we investigated defensin functions in T. absoluta during pathogen challenge. A genome-wide survey identified four defensin genes (tadef14), each encoding 76–124 amino acids (228–372bp ORFs). All contained the insect defensin motif (C-X5-16-C-X3-C-X9-10-C-X4-7-CX1-C) and a conserved two-exon structure. Phylogenetic analysis confirmed their membership in the insect defensin family. Post-infection expression profiling showed that tadef1/2 were upregulated by both B. bassiana and B. thuringiensis, while tadef3/4 were suppressed by B. bassiana but induced by B. thuringiensis relative to uninfected controls. Developmental and tissue-specific expression analyses showed that tadef1/2 peaked in early instar larvae, especially midgut. Recombinant tadef1/2 demonstrated antibacterial activity against B. thuringiensis but lacked antifungal effects against B. bassiana. These results establish tadef1/2 as key effectors against Gram-positive bacteria and provide a molecular basis for improving the biocontrol of T. absoluta via immune modulation.
球孢白僵菌和苏云金芽孢杆菌是广泛应用于生物防治的昆虫病原体。昆虫通过激活先天免疫防御来对抗这些微生物威胁,其中抗菌肽(AMPs),特别是防御素,起着关键作用。绝对灰蛾(鳞翅目:灰蛾科)是一种快速传播和高度破坏性的入侵番茄害虫,已对常规杀虫剂产生抗药性。为了提高抗菌肽对昆虫病原体的杀灭效果,我们研究了抗菌肽在攻毒过程中的防御素功能。一项全基因组调查确定了4个防御素基因(tadef1-4),每个基因编码76-124个氨基酸(228-372bp orf)。它们都含有昆虫防御蛋白基序(C-X5-16-C-X3-C-X9-10-C-X4-7-CX1-C)和保守的双外显子结构。系统发育分析证实了它们属于昆虫防御素家族。感染后表达谱分析显示,与未感染对照相比,球孢白僵菌和苏云金芽孢杆菌均上调了tadef1/2,而tadef3/4被球孢白僵菌抑制,但被苏云金芽孢杆菌诱导。发育和组织特异性表达分析表明,tadef1/2在早期幼虫,尤其是中肠中达到峰值。重组tadef1/2对苏云金芽孢杆菌具有抑菌活性,但对球孢芽孢杆菌缺乏抑菌作用。这些结果证实了tadef1/2是拮抗革兰氏阳性菌的关键效应物,为通过免疫调控提高绝对T.的生物防治提供了分子基础。
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引用次数: 0
Entomopathogenic fungi and chemical insecticides have synergistic action against adult large pine weevil, Hylobius abietis 昆虫病原真菌与化学杀虫剂对成虫大象鼻虫有协同作用
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-11 DOI: 10.1016/j.biocontrol.2025.105945
Johan van Vlaenderen , Niamh Hennessy , Padraig O’Tuama , Christopher D. Williams , Christine T. Griffin
The large pine weevil, Hylobius abietis, is a serious pest of reforestation across much of northern Europe. Larvae develop in the stumps and roots of recently felled conifers, and adults feed on the bark of young trees used to replant the site. Entomopathogenic fungi and chemical insecticides, alone and in combination, were tested against adult pine weevil in laboratory and field experiments. In a broad screening experiment, weevils were dipped in conidial suspension of Beauveria bassiana (Bb Naturalis and Bb SC4), Beauveria caledonica (Bc SG61) and Metarhizium anisopliae (Ma F52 and Ma SG6) and/or provided with twigs treated with chemical insecticides (cypermethrin, acetamiprid and thiacloprid). When assessed after 14 or 17 days, there was higher weevil mortality in combined treatments than expected based on individual treatments, with synergistic effects demonstrated in most cases. In a second laboratory experiment, Bb Naturalis, Bc SG61 and Ma F52 applied in each of two ways, either by dipping weevils or contaminating the substrate, gave synergistic effects in combination with cypermethrin, and mainly additive effects with acetamiprid. Weevil cadavers in all fungus-insecticide treatments tested developed mycosis, which would facilitate recycling of fungi in the field. In a field trial, a commercial formulation of Ma F52 (Met52) and cypermethrin were tested alone and in combination for protection of young Sitka spruce trees. Weevil feeding damage on trees treated with Met52 and half the recommended rate of cypermethrin did not differ significantly from that of trees that received full rate cypermethrin, but damage to trees that received half rate cypermethrin was higher. This study demonstrates the potential of entomopathogenic fungi to reduce the amount of chemical insecticide used to protect trees against pine weevil damage as part of an integrated pest management approach to pine weevil.
大型松象鼻虫是北欧大部分地区重新造林的严重害虫。幼虫在最近被砍伐的针叶树的树桩和树根中发育,成虫以用来重新种植的幼树的树皮为食。在室内和田间试验中,对昆虫病原真菌和化学杀虫剂单独或联合施用对成虫松象鼻虫进行了试验。在广泛筛选实验中,将象象虫浸在球孢白僵菌(Bb Naturalis和Bb SC4)、caledonica白僵菌(Bc SG61)和绿僵菌(Ma F52和Ma SG6)的分生悬浮液中,或放置在化学杀虫剂(氯氰菊酯、啶虫啉和噻虫啉)处理过的树枝上。在14或17天后进行评估时,联合治疗的象鼻虫死亡率高于基于单独治疗的预期,在大多数情况下显示出协同效应。在第二项室内试验中,Bb Naturalis、Bc SG61和Ma F52分别以浸渍象象虫或污染底物两种方式施用,与氯氰菊酯联用均产生协同效应,与啶虫脒联用主要为加性效应。经过所有真菌-杀虫剂处理的象鼻虫尸体都患上了真菌病,这将促进真菌在田间的回收利用。在田间试验中,对Ma F52 (Met52)和氯氰菊酯的商业配方进行了单独和联合试验,以保护锡特卡云杉幼树。施用Met52和一半推荐用量的高效氯氰菊酯对树木象鼻虫的取食损害与施用满效氯氰菊酯对树木的取食损害无显著差异,但施用半效氯氰菊酯对树木的取食损害更大。这项研究证明了昆虫病原真菌作为综合虫害管理方法的一部分,可以减少用于保护树木免受松象鼻虫损害的化学杀虫剂的用量。
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引用次数: 0
Integrating biological control as a sustainable approach for managing silver scurf and black dot in potatoes 结合生物防治作为马铃薯银斑病和黑点病的可持续治理方法
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-11 DOI: 10.1016/j.biocontrol.2025.105946
Apsara Indhu Gopan , Sabine Ravnskov , Jens Grønbech Hansen , Isaac Kwesi Abuley
The potato (Solanum tuberosum) is a globally cultivated crop, but blemish diseases such as silver scurf (Helminthosporium solani) and black dot (Colletotrichum coccodes) cause significant quality and market losses, black dot could reduce yield up to 30–50 % with estimated market loss of ∼ £3 million yearly and silver scurf can cause tuber weight losses up to ∼ 17 %. The origins of these diseases are multifaceted, involving complex interactions among pathogens, environmental conditions, and the host plant. This review aims to offer a thorough examination of current knowledge on their biology, epidemiology, and management practices, highlighting that cultural practices such as crop rotation, reduced tillage, regulated irrigation, curing and controlled storage conditions reduce disease severity, but are insufficient as standalone management strategies. Numerous bacterial and fungal biocontrol agents have shown strong in vitro inhibition but still require field validation. Plant derived metabolites and microbial metabolites also exhibited potent antifungal activity against these diseases under in vitro dual culture assays, mini-tuber assays and as post-harvest protectants. Although combining biocontrol agents with early detection, optimized agricultural practices, and regulated storage conditions has not yet been fully validated for potato tuber blemish diseases, similar integrated pest management strategies have proven successful against other crop diseases, highlighting the potential of this approach but also signifying the need for further research. Thus, this review highlights the existing biological management approaches investigated against black dot and silver scurf and the possibility of incorporating it with other non-chemical approaches for sustainable management of these diseases.
马铃薯(Solanum tuberosum)是一种全球种植的作物,但缺陷病,如银斑病(Helminthosporium solani)和黑点病(Colletotrichum coccodes)会造成重大的质量和市场损失,黑点病可使产量降低30 - 50%,估计每年的市场损失为300万英镑,银斑病可导致块茎重量损失高达17%。这些疾病的起源是多方面的,涉及病原体、环境条件和寄主植物之间复杂的相互作用。这篇综述的目的是对其生物学、流行病学和管理实践方面的现有知识进行全面的检查,强调诸如作物轮作、减少耕作、调节灌溉、养护和控制储存条件等文化实践可以降低疾病的严重程度,但作为单独的管理策略是不够的。许多细菌和真菌生物防治剂已经显示出很强的体外抑制作用,但仍需要实地验证。植物源代谢物和微生物代谢物在体外双重培养试验、微型块茎试验和收获后保护剂中也表现出对这些疾病的有效抗真菌活性。尽管将生物防治剂与早期检测、优化农业实践和规范储存条件结合起来防治马铃薯块茎缺陷病尚未得到充分验证,但类似的综合病虫害管理策略已被证明在防治其他作物疾病方面取得了成功,这突显了该方法的潜力,但也表明需要进一步研究。因此,本综述重点介绍了针对黑点病和银屑病的现有生物管理方法,以及将其与其他非化学方法相结合以实现这些疾病可持续管理的可能性。
{"title":"Integrating biological control as a sustainable approach for managing silver scurf and black dot in potatoes","authors":"Apsara Indhu Gopan ,&nbsp;Sabine Ravnskov ,&nbsp;Jens Grønbech Hansen ,&nbsp;Isaac Kwesi Abuley","doi":"10.1016/j.biocontrol.2025.105946","DOIUrl":"10.1016/j.biocontrol.2025.105946","url":null,"abstract":"<div><div>The potato (<em>Solanum tuberosum</em>) is a globally cultivated crop, but blemish diseases such as silver scurf (<em>Helminthosporium solani</em>) and black dot (<em>Colletotrichum coccodes</em>) cause significant quality and market losses, black dot could reduce yield up to 30–50 % with estimated market loss of ∼ £3 million yearly and silver scurf can cause tuber weight losses up to ∼ 17 %. The origins of these diseases are multifaceted, involving complex interactions among pathogens, environmental conditions, and the host plant. This review aims to offer a thorough examination of current knowledge on their biology, epidemiology, and management practices, highlighting that cultural practices such as crop rotation, reduced tillage, regulated irrigation, curing and controlled storage conditions reduce disease severity, but are insufficient as standalone management strategies. Numerous bacterial and fungal biocontrol agents have shown strong <em>in vitro</em> inhibition but still require field validation. Plant derived metabolites and microbial metabolites also exhibited potent antifungal activity against these diseases under <em>in vitro</em> dual culture assays, mini-tuber assays and as post-harvest protectants. Although combining biocontrol agents with early detection, optimized agricultural practices, and regulated storage conditions has not yet been fully validated for potato tuber blemish diseases, similar integrated pest management strategies have proven successful against other crop diseases, highlighting the potential of this approach but also signifying the need for further research. Thus, this review highlights the existing biological management approaches investigated against black dot and silver scurf and the possibility of incorporating it with other non-chemical approaches for sustainable management of these diseases.</div></div>","PeriodicalId":8880,"journal":{"name":"Biological Control","volume":"212 ","pages":"Article 105946"},"PeriodicalIF":3.4,"publicationDate":"2025-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145788929","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multi-omics dissection of Bacillus atrophaeus mediated antagonism against Wilsonomyces carpophilus in wild apricot 萎缩性芽孢杆菌介导的野生杏对carpopophilus拮抗作用的多组学分析
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-05 DOI: 10.1016/j.biocontrol.2025.105933
Ziyan Xu, Rong Ma
The development of green and targeted biocontrol agents requires a comprehensive understanding of the biocontrol potential of microbial strains and their interaction mechanisms with pathogens. In this study, we addressed the challenge of managing Wilsonomyces carpophilus by employing an integrative genomics and metabolomics approach to elucidate the antagonistic mechanisms of Bacillus atrophaeus XHG-1–3 m2. Genomic analysis rev ealed the presence of a complete srfABCD gene cluster along with diverse antimicrobial enzyme systems. Metabolomic profiling indicated that the strain undergoes metabolic reprogramming under interaction conditions, leading to the activation of arginine and proline biosynthesis while suppressing central carbon and phosphorus metabolism. This metabolic shift redirects resources toward the production of antimicrobial compounds. The fermentation broth exhibited a notable accumulation of amino acids, peptides, and alkaloids, achieving a peak inhibition rate of 79.38 % against the pathogen on day 5. A functional correlation was established between the key metabolite surfactin and the srfABCD gene cluster, confirming its pivotal role from both genetic and metabolic perspectives. Collectively, our findings demonstrate that B. atrophaeus XHG-1–3 m2 exerts biocontrol activity through metabolic reprogramming and the synergistic production of surfactin and other antimicrobial compounds. These results provide a molecular framework for developing targeted biocontrol strategies against fungal diseases in fruit trees.
开发绿色和靶向生物防治剂需要全面了解微生物菌株的生物防治潜力及其与病原体的相互作用机制。在这项研究中,我们采用整合基因组学和代谢组学方法来阐明萎缩芽孢杆菌XHG-1-3 m2的拮抗机制,解决了管理嗜车芽孢杆菌的挑战。基因组分析显示存在一个完整的srfABCD基因簇以及多种抗菌酶系统。代谢组学分析表明,该菌株在相互作用条件下进行了代谢重编程,导致精氨酸和脯氨酸的生物合成被激活,同时抑制了中心碳和磷的代谢。这种代谢转变将资源重新导向抗菌化合物的生产。发酵液中氨基酸、多肽和生物碱积累显著,第5天对病原菌的抑制率达到79.38%。关键代谢产物surfactin与srfABCD基因簇之间建立了功能相关性,从遗传和代谢角度证实了其关键作用。总之,我们的研究结果表明,萎缩芽孢杆菌XHG-1-3 m2通过代谢重编程和协同产生表面素和其他抗菌化合物来发挥生物防治活性。这些结果为制定针对果树真菌病害的生物防治策略提供了分子框架。
{"title":"Multi-omics dissection of Bacillus atrophaeus mediated antagonism against Wilsonomyces carpophilus in wild apricot","authors":"Ziyan Xu,&nbsp;Rong Ma","doi":"10.1016/j.biocontrol.2025.105933","DOIUrl":"10.1016/j.biocontrol.2025.105933","url":null,"abstract":"<div><div>The development of green and targeted biocontrol agents requires a comprehensive understanding of the biocontrol potential of microbial strains and their interaction mechanisms with pathogens. In this study, we addressed the challenge of managing <em>Wilsonomyces carpophilus</em> by employing an integrative genomics and metabolomics approach to elucidate the antagonistic mechanisms of <em>Bacillus atrophaeus</em> XHG-1–3 m2. Genomic analysis rev ealed the presence of a complete srfABCD gene cluster along with diverse antimicrobial enzyme systems. Metabolomic profiling indicated that the strain undergoes metabolic reprogramming under interaction conditions, leading to the activation of arginine and proline biosynthesis while suppressing central carbon and phosphorus metabolism. This metabolic shift redirects resources toward the production of antimicrobial compounds. The fermentation broth exhibited a notable accumulation of amino acids, peptides, and alkaloids, achieving a peak inhibition rate of 79.38 % against the pathogen on day 5. A functional correlation was established between the key metabolite surfactin and the srfABCD gene cluster, confirming its pivotal role from both genetic and metabolic perspectives. Collectively, our findings demonstrate that <em>B. atrophaeus</em> XHG-1–3 m2 exerts biocontrol activity through metabolic reprogramming and the synergistic production of surfactin and other antimicrobial compounds. These results provide a molecular framework for developing targeted biocontrol strategies against fungal diseases in fruit trees.</div></div>","PeriodicalId":8880,"journal":{"name":"Biological Control","volume":"212 ","pages":"Article 105933"},"PeriodicalIF":3.4,"publicationDate":"2025-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145788886","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Improved biocontrol performance of acid-tolerant Pseudomonas koreensis CLP-23 against Ralstonia solanacearum causing tobacco wilt 提高耐酸韩国假单胞菌CLP-23对烟草枯萎病的防效
IF 3.4 2区 农林科学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-03 DOI: 10.1016/j.biocontrol.2025.105934
Zhang Guozheng , Lin Wei , Liu Jianyang , Lin Yong , Ye Chao , Liu Tianbo , Jing Wang
Pseudomonas koreensis, a subgroup of the P. fluorescens complex, is a potential plant growth-promoting rhizobacterium. The aim of this study was to evaluate the biocontrol effects of Pseudomonas koreensis CLP-23 against R. solanacearum under acidic conditions, both in vitro and in vivo. P. koreensis CLP-23 had an antagonistic activity against R. solanacearum, with the strongest antagonism at pH 5.5. Additionally, P. koreensis CLP-23 enhanced the plant growth-promoting (PGP) characteristics, including protease production, indole-3-acetic acid synthesis, and phosphate solubilization, particularly at a pH of 5.5. In pot and field, P. koreensis CLP-23 improved biomass accumulation and enhanced bioccontrol efficacy to tobacco wilt in soils with pH 5.5, respectively. Morover, P. koreensis CLP-23 significantly enhanced phosphatase and urease activities as well as available phosphorus and potassium contents in the rhizosphere soil within 45 d post-inoculation. Our results indicated that an acid-tolerant P. koreensis CLP-23 plays an important role in the tobacco wilt prevention, the process of growth enhancement under acidic soil.
韩国假单胞菌是荧光假单胞菌复合体的一个亚群,是一种潜在的植物促生长根瘤菌。研究了酸性条件下韩国假单胞菌CLP-23对番茄红枯病菌的体内和体外防效。韩国松CLP-23对茄枯病菌具有拮抗活性,在pH为5.5时拮抗作用最强。此外,韩国平CLP-23增强了植物生长促进(PGP)特性,包括蛋白酶生成、吲哚-3-乙酸合成和磷酸盐增溶,特别是在pH为5.5时。盆栽和田间试验中,在pH为5.5的土壤中,韩国松CLP-23分别改善了土壤生物量积累,提高了对烟草枯萎病的防治效果。此外,接种45 d后,韩国松CLP-23显著提高了根际土壤磷酸酶和脲酶活性以及速效磷和速效钾含量。结果表明,耐酸型韩国平CLP-23在酸性土壤下烟草防枯萎、促生长过程中起着重要作用。
{"title":"Improved biocontrol performance of acid-tolerant Pseudomonas koreensis CLP-23 against Ralstonia solanacearum causing tobacco wilt","authors":"Zhang Guozheng ,&nbsp;Lin Wei ,&nbsp;Liu Jianyang ,&nbsp;Lin Yong ,&nbsp;Ye Chao ,&nbsp;Liu Tianbo ,&nbsp;Jing Wang","doi":"10.1016/j.biocontrol.2025.105934","DOIUrl":"10.1016/j.biocontrol.2025.105934","url":null,"abstract":"<div><div><em>Pseudomonas koreensis</em>, a subgroup of the <em>P. fluorescens</em> complex, is a potential plant growth-promoting rhizobacterium. The aim of this study was to evaluate the biocontrol effects of <em>Pseudomonas koreensis</em> CLP-23 against <em>R. solanacearum</em> under acidic conditions, both <em>in vitro</em> and <em>in vivo</em>. <em>P. koreensis</em> CLP-23 had an antagonistic activity against <em>R. solanacearum</em>, with the strongest antagonism at pH 5.5. Additionally, <em>P. koreensis</em> CLP-23 enhanced the plant growth-promoting (PGP) characteristics, including protease production, indole-3-acetic acid synthesis, and phosphate solubilization, particularly at a pH of 5.5. In pot and field, <em>P. koreensis</em> CLP-23 improved biomass accumulation and enhanced bioccontrol efficacy to tobacco wilt in soils with pH 5.5, respectively. Morover, <em>P. koreensis</em> CLP-23 significantly enhanced phosphatase and urease activities as well as available phosphorus and potassium contents in the rhizosphere soil within 45 d post-inoculation. Our results indicated that an acid-tolerant <em>P. koreensis</em> CLP-23 plays an important role in the tobacco wilt prevention, the process of growth enhancement under acidic soil.</div></div>","PeriodicalId":8880,"journal":{"name":"Biological Control","volume":"212 ","pages":"Article 105934"},"PeriodicalIF":3.4,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145712311","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Biological Control
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