Pub Date : 2025-12-31DOI: 10.1186/s13293-025-00783-8
Jessica Gronsbell, Hilary Thurston, Lillian Dong, Vanessa Ferguson, Diksha Sen Chaudhury, Braden O'Neill, Katrina S Sha, Rebecca Bonneville
Computational phenotyping has emerged as a practical solution to the incomplete collection of data on gender in electronic health records (EHRs). This approach relies on algorithms to infer a patient's gender using the available data in their health record, such as diagnosis codes, medication histories, and information in clinical notes. Although intended to improve the visibility of trans and gender-expansive populations in EHR-based biomedical research, computational phenotyping raises significant methodological and ethical concerns related to the potential misuse of algorithm outputs. In this paper, we provide a narrative review of computational phenotyping of gender and examine its challenges through a critical lens. We also highlight existing recommendations for biomedical researchers and propose priorities for future work in this domain.
{"title":"When algorithms infer gender: revisiting computational phenotyping with electronic health records data.","authors":"Jessica Gronsbell, Hilary Thurston, Lillian Dong, Vanessa Ferguson, Diksha Sen Chaudhury, Braden O'Neill, Katrina S Sha, Rebecca Bonneville","doi":"10.1186/s13293-025-00783-8","DOIUrl":"https://doi.org/10.1186/s13293-025-00783-8","url":null,"abstract":"<p><p>Computational phenotyping has emerged as a practical solution to the incomplete collection of data on gender in electronic health records (EHRs). This approach relies on algorithms to infer a patient's gender using the available data in their health record, such as diagnosis codes, medication histories, and information in clinical notes. Although intended to improve the visibility of trans and gender-expansive populations in EHR-based biomedical research, computational phenotyping raises significant methodological and ethical concerns related to the potential misuse of algorithm outputs. In this paper, we provide a narrative review of computational phenotyping of gender and examine its challenges through a critical lens. We also highlight existing recommendations for biomedical researchers and propose priorities for future work in this domain.</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":" ","pages":""},"PeriodicalIF":5.1,"publicationDate":"2025-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145877587","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-31DOI: 10.1186/s13293-025-00807-3
Joan Roughgarden
Darwin's [The Descent of Man (2nd Edn.) (1871)] theory of sexual selection has been expanded into a system of interlocking hypotheses to explain many features of sexual reproduction. It focusses on mating success and relies on processes featuring bad genes, selfishness, competition, conflict, coercion, ownership and deceit. Logical flaws and an absence of factual support challenge the sexual-selection system. An alternative explanatory system, social selection, focusses on offspring delivery and relies on processes featuring negotiation, teamwork and division of labor. The sexual-selection system and the social-selection system differ in their world views of nature.
{"title":"Explaining sex: contrast between social and sexual selection.","authors":"Joan Roughgarden","doi":"10.1186/s13293-025-00807-3","DOIUrl":"https://doi.org/10.1186/s13293-025-00807-3","url":null,"abstract":"<p><p>Darwin's [The Descent of Man (2nd Edn.) (1871)] theory of sexual selection has been expanded into a system of interlocking hypotheses to explain many features of sexual reproduction. It focusses on mating success and relies on processes featuring bad genes, selfishness, competition, conflict, coercion, ownership and deceit. Logical flaws and an absence of factual support challenge the sexual-selection system. An alternative explanatory system, social selection, focusses on offspring delivery and relies on processes featuring negotiation, teamwork and division of labor. The sexual-selection system and the social-selection system differ in their world views of nature.</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":" ","pages":""},"PeriodicalIF":5.1,"publicationDate":"2025-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145877502","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-30DOI: 10.1186/s13293-025-00813-5
Mina Guérin, Fanny Saulnier, Louis Cartier, Marco Hirnstein, Sébastien Hétu, Robert-Paul Juster
<p><strong>Background: </strong>Sexually polymorphic cognition (SPC) is influenced by sex differences and gender diversity. These differences have long been studied from a biological approach, but more and more studies are pointing to the importance of considering socio-culturalzgender-related factors. Several studies have shown, for example, that explicit gender stereotypes can modulate performance on cognitive tasks that are sexually dimorphic. However, no study has examined the relationship between gender stereotypes and SPC in a population that includes transgender and nonbinary (TNB) people.</p><p><strong>Methods: </strong>We recruited 488 adults who completed eight cognitive tasks measuring a range of cognitive functions during a 150-minute session. The three groups were cis women (n = 160), cis men (n = 172), and TNB people (n = 156). Participants were randomly assigned to three experimental conditions: a control condition and two conditions in which participants were exposed to an explicit gender stereotype prior to each task. Psychosocial data were collected using self-report questionnaires.</p><p><strong>Results: </strong>The cognitive performance of TNB people was similar to that of cis men in a judgment of line orientation task, similar to that of cis women in a fine motor skills task and superior to both cis men and cis women in a verbal learning task. Explicit gender stereotypes had no direct impact on cognitive performance. Interestingly, differences in performance between cis men, cis women and TNB people were not apparent under all experimental conditions, reflecting the inconsistency of results in the literature.</p><p><strong>Conclusion: </strong>Our results show that the inclusion of gender diverse people allows further exploration of SPC beyond "sexual dimorphisms" and that differences in cognition cannot be explained by birth-assigned sex alone. Moreover, sex/gender variations in cognition across different stereotype induction conditions highlight the lack of consistency in the literature on SPC. Future research should ascertain whether protocol features between studies can explain the variability in results and/or whether experimenters' stereotyped beliefs inadvertnantly influence the conclusions drawn from their studies. Many studies have shown that there are sex differences in cognition. Briefly, women perform better on verbal and fine motor tasks, while men perform better on spatial and mental rotation tasks. With regard to people with other gender identities and even sexual orientations other than heterosexual, the research points out that these sexual differences are reflected differently. However, more studies are needed. To understand sexual differences in cognition, several authors are interested in the role of gender stereotypes and have shown that verbalising a stereotype explicitly before a cognitive task can modify performance on this task. Our aim was therefore to determine how explicit stereotypes could influe
{"title":"Explicit gender stereotypes and sexually polymorphic cognition by gender identity.","authors":"Mina Guérin, Fanny Saulnier, Louis Cartier, Marco Hirnstein, Sébastien Hétu, Robert-Paul Juster","doi":"10.1186/s13293-025-00813-5","DOIUrl":"https://doi.org/10.1186/s13293-025-00813-5","url":null,"abstract":"<p><strong>Background: </strong>Sexually polymorphic cognition (SPC) is influenced by sex differences and gender diversity. These differences have long been studied from a biological approach, but more and more studies are pointing to the importance of considering socio-culturalzgender-related factors. Several studies have shown, for example, that explicit gender stereotypes can modulate performance on cognitive tasks that are sexually dimorphic. However, no study has examined the relationship between gender stereotypes and SPC in a population that includes transgender and nonbinary (TNB) people.</p><p><strong>Methods: </strong>We recruited 488 adults who completed eight cognitive tasks measuring a range of cognitive functions during a 150-minute session. The three groups were cis women (n = 160), cis men (n = 172), and TNB people (n = 156). Participants were randomly assigned to three experimental conditions: a control condition and two conditions in which participants were exposed to an explicit gender stereotype prior to each task. Psychosocial data were collected using self-report questionnaires.</p><p><strong>Results: </strong>The cognitive performance of TNB people was similar to that of cis men in a judgment of line orientation task, similar to that of cis women in a fine motor skills task and superior to both cis men and cis women in a verbal learning task. Explicit gender stereotypes had no direct impact on cognitive performance. Interestingly, differences in performance between cis men, cis women and TNB people were not apparent under all experimental conditions, reflecting the inconsistency of results in the literature.</p><p><strong>Conclusion: </strong>Our results show that the inclusion of gender diverse people allows further exploration of SPC beyond \"sexual dimorphisms\" and that differences in cognition cannot be explained by birth-assigned sex alone. Moreover, sex/gender variations in cognition across different stereotype induction conditions highlight the lack of consistency in the literature on SPC. Future research should ascertain whether protocol features between studies can explain the variability in results and/or whether experimenters' stereotyped beliefs inadvertnantly influence the conclusions drawn from their studies. Many studies have shown that there are sex differences in cognition. Briefly, women perform better on verbal and fine motor tasks, while men perform better on spatial and mental rotation tasks. With regard to people with other gender identities and even sexual orientations other than heterosexual, the research points out that these sexual differences are reflected differently. However, more studies are needed. To understand sexual differences in cognition, several authors are interested in the role of gender stereotypes and have shown that verbalising a stereotype explicitly before a cognitive task can modify performance on this task. Our aim was therefore to determine how explicit stereotypes could influe","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":" ","pages":""},"PeriodicalIF":5.1,"publicationDate":"2025-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145861787","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Background: Biological sex and sociocultural gender may influence changes in health status critical to clinical decision-making, yet scientific evidence of their effects on clinically relevant outcomes remain uncertain. We aimed to systematically review research on sex and gender effects on clinical outcomes and to assess the consistency and significance of associations between sex, gender, and clinical outcomes.
Methods: We searched Medline, Embase, PsycInfo, CINAHL, and Web of Science from each database's inception to November 20, 2023, and included English language peer-reviewed research utilizing standardized measures of sex and gender attributes in adults to measure their association with clinically relevant outcomes. We performed a risk of bias assessment and certainty assessment using criteria set a priori. We created visualizations of results with links to study quality and sex and gender attributes, which facilitated certainty assessment. We reported results across sex and gender-related attributes and measures.
Results: Of the 12,964 unique records identified, 19 studies with a total of 643,093 participants (54% male) were included in data synthesis. Four studies measured attributes of sex (testosterone, sex-specific polygenic score), and 15 studies measured attributes of gender (gender identity, roles, and adherence to masculine norms). We observed great heterogeneity in the direction and significance of the associations, resulting in evidence of moderate certainty only for the association between testosterone level and depression, and erectile function. We regarded all other evidence as very low in certainty.
Conclusion: Research findings regarding the effects of sex and gender attributes on clinical outcomes is variable. However, results suggest that neither sex nor gender attributes should be ignored when investigating clinically relevant outcomes. To enhance certainty, future research should delve into sex and gender attributes concurrently, taking into account that clinical disorders are not evenly distributed across sexes and genders. This approach would provide needed evidence to drive precision medicine and person-centered care.
Prospero: CRD42023456917.
Funding: Global Brain Health Institute, Alzheimer's Association, and Alzheimer's Society UK Pilot Award for Global Brain Health Leaders (GBHI ALZ UK-23-971123); Canada Research Chairs Program for Neurological Disorders and Brain Health (CRC-2021-00074).
背景:生理性别和社会文化性别可能影响对临床决策至关重要的健康状况变化,但其对临床相关结果影响的科学证据仍不确定。我们的目的是系统地回顾有关性别和社会性别对临床结果影响的研究,并评估性别、社会性别和临床结果之间关联的一致性和重要性。方法:我们检索了Medline、Embase、PsycInfo、CINAHL和Web of Science,从每个数据库的建立到2023年11月20日,并纳入了使用成人性别和性别属性标准化测量方法的英语同行评审研究,以衡量其与临床相关结果的关联。我们使用先验设定的标准进行了偏倚风险评估和确定性评估。我们创建了可视化的结果与研究质量和性别和性别属性的链接,这有助于确定性评估。我们报告了跨性别和与性别相关的属性和措施的结果。结果:在确定的12,964条独特记录中,19项研究共纳入643,093名参与者(54%为男性)。4项研究测量了性别属性(睾丸激素、性别特异性多基因评分),15项研究测量了性别属性(性别认同、角色和对男性规范的遵守)。我们观察到这些关联的方向和意义存在很大的异质性,因此只有睾酮水平与抑郁和勃起功能之间的关联具有中等确定性。我们认为其他证据的确定性都很低。结论:关于性别和性别属性对临床结果影响的研究结果是可变的。然而,结果表明,在调查临床相关结果时,性别和性别属性都不应被忽视。为了提高确定性,未来的研究应同时深入研究性别和性别属性,同时考虑到临床疾病在性别和性别之间的分布并不均匀。这种方法将为推动精准医疗和以人为本的护理提供必要的证据。普洛斯彼罗:CRD42023456917。资助:全球脑健康研究所、阿尔茨海默病协会和阿尔茨海默病协会英国全球脑健康领袖试点奖(GBHI ALZ UK-23-971123);加拿大神经疾病和大脑健康研究主席项目(CRC-2021-00074)。
{"title":"The effects of sex and gender attributes on clinical outcomes: a systematic review.","authors":"Anisa Brar, Anjali Issar, Thaisa Tylinski Sant'Ana, Tatyana Mollayeva","doi":"10.1186/s13293-025-00772-x","DOIUrl":"10.1186/s13293-025-00772-x","url":null,"abstract":"<p><strong>Background: </strong>Biological sex and sociocultural gender may influence changes in health status critical to clinical decision-making, yet scientific evidence of their effects on clinically relevant outcomes remain uncertain. We aimed to systematically review research on sex and gender effects on clinical outcomes and to assess the consistency and significance of associations between sex, gender, and clinical outcomes.</p><p><strong>Methods: </strong>We searched Medline, Embase, PsycInfo, CINAHL, and Web of Science from each database's inception to November 20, 2023, and included English language peer-reviewed research utilizing standardized measures of sex and gender attributes in adults to measure their association with clinically relevant outcomes. We performed a risk of bias assessment and certainty assessment using criteria set a priori. We created visualizations of results with links to study quality and sex and gender attributes, which facilitated certainty assessment. We reported results across sex and gender-related attributes and measures.</p><p><strong>Results: </strong>Of the 12,964 unique records identified, 19 studies with a total of 643,093 participants (54% male) were included in data synthesis. Four studies measured attributes of sex (testosterone, sex-specific polygenic score), and 15 studies measured attributes of gender (gender identity, roles, and adherence to masculine norms). We observed great heterogeneity in the direction and significance of the associations, resulting in evidence of moderate certainty only for the association between testosterone level and depression, and erectile function. We regarded all other evidence as very low in certainty.</p><p><strong>Conclusion: </strong>Research findings regarding the effects of sex and gender attributes on clinical outcomes is variable. However, results suggest that neither sex nor gender attributes should be ignored when investigating clinically relevant outcomes. To enhance certainty, future research should delve into sex and gender attributes concurrently, taking into account that clinical disorders are not evenly distributed across sexes and genders. This approach would provide needed evidence to drive precision medicine and person-centered care.</p><p><strong>Prospero: </strong>CRD42023456917.</p><p><strong>Funding: </strong>Global Brain Health Institute, Alzheimer's Association, and Alzheimer's Society UK Pilot Award for Global Brain Health Leaders (GBHI ALZ UK-23-971123); Canada Research Chairs Program for Neurological Disorders and Brain Health (CRC-2021-00074).</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":"16 1","pages":"108"},"PeriodicalIF":5.1,"publicationDate":"2025-12-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12751436/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145853714","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The liver is a central metabolic organ with pronounced sex-specific differences shaped by sex hormones, sex chromosome-linked gene expression, ageing, and circadian rhythm. These factors influence disease susceptibility, progression, and treatment response, with notable differences between females and males in the prevalence, severity, and clinical outcomes of metabolic dysfunction-associated steatotic liver disease. This condition represents a growing global health burden that can progress to hepatocellular carcinoma, the second leading cause of cancer-related death worldwide. Despite this impact, sex remains an underexplored variable in liver research, and the molecular mechanisms by which sex influences disease development remain poorly understood. In this review, we examine the key determinants of sex differences in liver pathogenesis. We highlight the protective role of estrogen signaling in female liver metabolism, the increased vulnerability to disease progression after menopause, and the contribution of circadian regulation to sex-specific outcomes. We further discuss how the lack of systematic inclusion of both sexes in preclinical and clinical studies limits the identification of biomarkers and the development of effective therapeutic interventions. Incorporating sex as a biological variable is therefore essential to improve mechanistic understanding, translational relevance, and the personalization of treatment approaches. Particular emphasis is placed on animal models that reflect sex-specific liver physiology and pathophysiology, as these provide valuable frameworks for studying disease progression and testing targeted interventions. In summary, recognizing and integrating sexual dimorphism in liver metabolism is crucial to advancing prevention, diagnosis, and treatment strategies. Addressing sex differences is critical for developing accurate diagnostic tools and personalized therapeutic approaches, ultimately improving outcomes for both women and men with liver disease.
{"title":"The importance of sex dimorphism in liver metabolism and progressive liver diseases.","authors":"Eva Kočar, Kaja Blagotinšek Cokan, Tinkara Kreft, Tadeja Režen, Damjana Rozman","doi":"10.1186/s13293-025-00811-7","DOIUrl":"https://doi.org/10.1186/s13293-025-00811-7","url":null,"abstract":"<p><p>The liver is a central metabolic organ with pronounced sex-specific differences shaped by sex hormones, sex chromosome-linked gene expression, ageing, and circadian rhythm. These factors influence disease susceptibility, progression, and treatment response, with notable differences between females and males in the prevalence, severity, and clinical outcomes of metabolic dysfunction-associated steatotic liver disease. This condition represents a growing global health burden that can progress to hepatocellular carcinoma, the second leading cause of cancer-related death worldwide. Despite this impact, sex remains an underexplored variable in liver research, and the molecular mechanisms by which sex influences disease development remain poorly understood. In this review, we examine the key determinants of sex differences in liver pathogenesis. We highlight the protective role of estrogen signaling in female liver metabolism, the increased vulnerability to disease progression after menopause, and the contribution of circadian regulation to sex-specific outcomes. We further discuss how the lack of systematic inclusion of both sexes in preclinical and clinical studies limits the identification of biomarkers and the development of effective therapeutic interventions. Incorporating sex as a biological variable is therefore essential to improve mechanistic understanding, translational relevance, and the personalization of treatment approaches. Particular emphasis is placed on animal models that reflect sex-specific liver physiology and pathophysiology, as these provide valuable frameworks for studying disease progression and testing targeted interventions. In summary, recognizing and integrating sexual dimorphism in liver metabolism is crucial to advancing prevention, diagnosis, and treatment strategies. Addressing sex differences is critical for developing accurate diagnostic tools and personalized therapeutic approaches, ultimately improving outcomes for both women and men with liver disease.</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":" ","pages":""},"PeriodicalIF":5.1,"publicationDate":"2025-12-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145846308","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-24DOI: 10.1186/s13293-025-00809-1
Leah C Beauchamp, Lily A Palumbo, Toby B Lanser, Mariam Baig, Laura M Cox
Background: While it is clear that inflammation contributes to Parkinson's disease (PD) and prevalence is higher in males, sex remains an underexplored determinant of immune responses in PD.
Methods: Using the 3KL transgenic mouse model, which expresses three E to K α-synuclein mutations, we investigated how sex and age shape peripheral and central immunity and behavior in synucleinopathy. Male and female 3KL mice were aged to 8- and 14-months. At these ages animals underwent motor and cognitive assessment, followed by assessment of the peripheral immune response using flow cytometry and analysis of microglial transcriptional profiles by bulk RNA sequencing.
Results: Male 3KL mice exhibited earlier onset and greater severity of motor and cognitive impairments, which was linked to a pro-inflammatory peripheral immune profile marked by increased cytotoxic CD8⁺ T cells and IFNγ-producing CD4 Th1 cells. In contrast, female mice displayed delayed symptom onset, preserved cognition, along with early elevations in regulatory IL-10⁺ CD4 and γδ T cells. RNA sequencing of microglia revealed broad sex differences at 8 months. Males demonstrated early upregulation of microglia neurodegenerative signatures, MHC class I/II signaling, ceramide signaling, and pronounced lipid dysregulation, while females showed upregulation of microglial pathways related to protein, metabolic, and neuronal maintenance, including phagosome formation, docosahexaenoic acid signaling, and synaptogenesis pathways. Microglial transcriptional differences were nearly absent by 14 months, suggesting sex-specific trajectories converge during late-stage disease, which is concurrent with a decrease in estrogen in aged female mice.
Conclusions: Together, these findings reveal distinct immune signaling in male and female 3KL mice and identify coordinated changes in T cell and microglial responses that may contribute to sex differences in PD vulnerability and progression. This work underscores the importance of incorporating sex as a biological variable in neurodegeneration research and provides mechanistic insight into immune-mediated modulation of synucleinopathy.
{"title":"Sex-dependent immune activation shapes disease progression in a model of Parkinson's disease.","authors":"Leah C Beauchamp, Lily A Palumbo, Toby B Lanser, Mariam Baig, Laura M Cox","doi":"10.1186/s13293-025-00809-1","DOIUrl":"https://doi.org/10.1186/s13293-025-00809-1","url":null,"abstract":"<p><strong>Background: </strong>While it is clear that inflammation contributes to Parkinson's disease (PD) and prevalence is higher in males, sex remains an underexplored determinant of immune responses in PD.</p><p><strong>Methods: </strong>Using the 3KL transgenic mouse model, which expresses three E to K α-synuclein mutations, we investigated how sex and age shape peripheral and central immunity and behavior in synucleinopathy. Male and female 3KL mice were aged to 8- and 14-months. At these ages animals underwent motor and cognitive assessment, followed by assessment of the peripheral immune response using flow cytometry and analysis of microglial transcriptional profiles by bulk RNA sequencing.</p><p><strong>Results: </strong>Male 3KL mice exhibited earlier onset and greater severity of motor and cognitive impairments, which was linked to a pro-inflammatory peripheral immune profile marked by increased cytotoxic CD8⁺ T cells and IFNγ-producing CD4 Th1 cells. In contrast, female mice displayed delayed symptom onset, preserved cognition, along with early elevations in regulatory IL-10⁺ CD4 and γδ T cells. RNA sequencing of microglia revealed broad sex differences at 8 months. Males demonstrated early upregulation of microglia neurodegenerative signatures, MHC class I/II signaling, ceramide signaling, and pronounced lipid dysregulation, while females showed upregulation of microglial pathways related to protein, metabolic, and neuronal maintenance, including phagosome formation, docosahexaenoic acid signaling, and synaptogenesis pathways. Microglial transcriptional differences were nearly absent by 14 months, suggesting sex-specific trajectories converge during late-stage disease, which is concurrent with a decrease in estrogen in aged female mice.</p><p><strong>Conclusions: </strong>Together, these findings reveal distinct immune signaling in male and female 3KL mice and identify coordinated changes in T cell and microglial responses that may contribute to sex differences in PD vulnerability and progression. This work underscores the importance of incorporating sex as a biological variable in neurodegeneration research and provides mechanistic insight into immune-mediated modulation of synucleinopathy.</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":" ","pages":""},"PeriodicalIF":5.1,"publicationDate":"2025-12-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145817710","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-24DOI: 10.1186/s13293-025-00781-w
Melanie D Smith, Seema Plaisier, James Breen, K Justinian Bogias, Tanja Jankovic-Karasoulos, Dylan McCullough, Dale McAninch, Anya L Arthurs, Melissa A Wilson, Katherine A Pillman, Claire T Roberts
<p><strong>Background: </strong>Preeclampsia is a hypertensive disorder of pregnancy with major maternal and fetal consequences. While the molecular basis of early-onset preeclampsia is well studied, the mechanisms underlying late-onset disease-and how they differ by fetal sex-remain poorly understood. Placental transcriptomic profiling at term can reveal persistent molecular alterations reflecting cumulative disease processes.</p><p><strong>Methods: </strong>We conducted a cross-sectional observational analysis of placental gene expression using RNA sequencing in a subset of 58 term placentas (21 male-bearing and 37 female-bearing pregnancies) drawn from two large prospective birth cohorts. Pregnancies were classified based on a clinical diagnosis of late-onset preeclampsia (diagnosed ≥ 20 weeks' gestation according to ISSHP criteria) or as uncomplicated pregnancies. We then assessed for differential gene expression. Cell type proportions were estimated using CIBERSORTx from a placenta-specific reference single-cell dataset. Weighted gene co-expression network analysis identified modules of co-expressed genes associated with late-onset preeclampsia and fetal sex.</p><p><strong>Results: </strong>Differential gene expression analysis identified 150 genes with altered expression in male-bearing placentas from pregnancies with late-onset preeclampsia compared to those from uncomplicated pregnancies. No differentially expressed genes were identified in female-bearing placentas. Cell type deconvolution revealed increased abundance of CD14 + monocytes and CD8 + activated T cells (log odds of 1.42 and 1.44 respectively) and reduced fetal GZMK natural killer cells (log odds of 0.60) in male-bearing placentas from affected pregnancies. In female-bearing placentas, late-onset preeclampsia was associated with increased fetal nucleated red blood cells and maternal plasma cells (log odds of 1.33 and 1.40 respectively). Male-specific co-expression analysis identified gene modules enriched for biological processes including RNA processing, immune regulation, and metabolism.</p><p><strong>Conclusions: </strong>Placental transcription and cellular responses to late-onset preeclampsia differ by fetal sex. Evidence of altered immune cell composition and gene co-expression in male-bearing placentas suggests a sex-specific vulnerability. These findings highlight the importance of considering fetal sex in molecular investigation and clinical management of preeclampsia. Preeclampsia is a common pregnancy complication marked by high blood pressure, but how it affects the placenta, especially in later pregnancy and depending on the baby's sex, is not well understood. In this study, we analysed placental tissue from pregnancies with and without late-onset preeclampsia using RNA sequencing. By separating the data based on whether the neonate was male or female, we found striking differences in gene expression. Only placentas from male-bearing pregnancies showed significant
{"title":"Sex-specific placental transcriptome alterations in late-onset preeclampsia reveal male-biased immune and metabolic dysregulation.","authors":"Melanie D Smith, Seema Plaisier, James Breen, K Justinian Bogias, Tanja Jankovic-Karasoulos, Dylan McCullough, Dale McAninch, Anya L Arthurs, Melissa A Wilson, Katherine A Pillman, Claire T Roberts","doi":"10.1186/s13293-025-00781-w","DOIUrl":"10.1186/s13293-025-00781-w","url":null,"abstract":"<p><strong>Background: </strong>Preeclampsia is a hypertensive disorder of pregnancy with major maternal and fetal consequences. While the molecular basis of early-onset preeclampsia is well studied, the mechanisms underlying late-onset disease-and how they differ by fetal sex-remain poorly understood. Placental transcriptomic profiling at term can reveal persistent molecular alterations reflecting cumulative disease processes.</p><p><strong>Methods: </strong>We conducted a cross-sectional observational analysis of placental gene expression using RNA sequencing in a subset of 58 term placentas (21 male-bearing and 37 female-bearing pregnancies) drawn from two large prospective birth cohorts. Pregnancies were classified based on a clinical diagnosis of late-onset preeclampsia (diagnosed ≥ 20 weeks' gestation according to ISSHP criteria) or as uncomplicated pregnancies. We then assessed for differential gene expression. Cell type proportions were estimated using CIBERSORTx from a placenta-specific reference single-cell dataset. Weighted gene co-expression network analysis identified modules of co-expressed genes associated with late-onset preeclampsia and fetal sex.</p><p><strong>Results: </strong>Differential gene expression analysis identified 150 genes with altered expression in male-bearing placentas from pregnancies with late-onset preeclampsia compared to those from uncomplicated pregnancies. No differentially expressed genes were identified in female-bearing placentas. Cell type deconvolution revealed increased abundance of CD14 + monocytes and CD8 + activated T cells (log odds of 1.42 and 1.44 respectively) and reduced fetal GZMK natural killer cells (log odds of 0.60) in male-bearing placentas from affected pregnancies. In female-bearing placentas, late-onset preeclampsia was associated with increased fetal nucleated red blood cells and maternal plasma cells (log odds of 1.33 and 1.40 respectively). Male-specific co-expression analysis identified gene modules enriched for biological processes including RNA processing, immune regulation, and metabolism.</p><p><strong>Conclusions: </strong>Placental transcription and cellular responses to late-onset preeclampsia differ by fetal sex. Evidence of altered immune cell composition and gene co-expression in male-bearing placentas suggests a sex-specific vulnerability. These findings highlight the importance of considering fetal sex in molecular investigation and clinical management of preeclampsia. Preeclampsia is a common pregnancy complication marked by high blood pressure, but how it affects the placenta, especially in later pregnancy and depending on the baby's sex, is not well understood. In this study, we analysed placental tissue from pregnancies with and without late-onset preeclampsia using RNA sequencing. By separating the data based on whether the neonate was male or female, we found striking differences in gene expression. Only placentas from male-bearing pregnancies showed significant","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":" ","pages":"8"},"PeriodicalIF":5.1,"publicationDate":"2025-12-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12809948/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145826867","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-23DOI: 10.1186/s13293-025-00786-5
Jian Zhang, Ruifang Wang, Xiuli Tian, Nan Ding, Yajun He, Kexin Wang, Chengbin Tao, Jiao Cai, Qiliang Jian, Fang Wang
Background: Polycystic ovary syndrome (PCOS) impairs endometrial receptivity, contributing to reproductive dysfunction. Our previous work identified ferroptosis-related dipeptidyl Peptidase 4 (DPP4) as a key regulator of endometrial receptivity in PCOS, though its mechanism remained unclear.
Objective: We aimed to explore the regulatory mechanism of DPP4 in the occurrence and tolerance of endometrial ferroptosis in PCOS.
Methods: Using high dose (HD) DHEA-induced rats and hormone-treated (E2 and HD DHEA) telomerase-immortalized human endometrial stromal cells (T-HESCs), we investigated DPP4's role in endometrial ferroptosis and receptivity. We evaluated the correlation of specific endometrial marker expression levels with reproductive outcomes.
Results: Phenotypic assessments revealed elevated endometrial Fe2+ accumulation, antioxidant dysfunction, mitochondrial damage, and enhanced estrogen/androgen receptor expression in PCOS models. DPP4 inhibition via sitagliptin improved decidualization responses and receptivity markers in rats prior to pregnancy. In T-HESCs, downregulated DPP4 could suppress hormone receptor expression and ferroptosis markers. Functional validation using BeWo spheroid implantation assays demonstrated restored endometrial receptivity following DPP4 intervention. Mechanistically, DPP4-driven ferroptosis exacerbated PCOS-associated endometrial dysfunction, while its suppression would enhance stromal cell decidualization capacity and implantation potential. Consistent with these findings, evaluation of endometrial specimens from PCOS patients confirmed a marked reversal of ferroptosis-related markers following sitagliptin intervention, which was further associated with significantly improved reproductive outcomes, including higher clinical pregnancy and live birth rates.
Conclusion: Reducing DPP4 expression not only inhibited ferroptosis but also improved the PCOS phenotype of the endometrium, ultimately influencing changes in endometrial receptivity, and indicating the ferroptosis-related protein DPP4 as a promising therapeutic target.
{"title":"The mechanism study of targeting DPP4 in regulating ferroptosis and its influence on endometrial receptivity in PCOS.","authors":"Jian Zhang, Ruifang Wang, Xiuli Tian, Nan Ding, Yajun He, Kexin Wang, Chengbin Tao, Jiao Cai, Qiliang Jian, Fang Wang","doi":"10.1186/s13293-025-00786-5","DOIUrl":"10.1186/s13293-025-00786-5","url":null,"abstract":"<p><strong>Background: </strong>Polycystic ovary syndrome (PCOS) impairs endometrial receptivity, contributing to reproductive dysfunction. Our previous work identified ferroptosis-related dipeptidyl Peptidase 4 (DPP4) as a key regulator of endometrial receptivity in PCOS, though its mechanism remained unclear.</p><p><strong>Objective: </strong>We aimed to explore the regulatory mechanism of DPP4 in the occurrence and tolerance of endometrial ferroptosis in PCOS.</p><p><strong>Methods: </strong>Using high dose (HD) DHEA-induced rats and hormone-treated (E2 and HD DHEA) telomerase-immortalized human endometrial stromal cells (T-HESCs), we investigated DPP4's role in endometrial ferroptosis and receptivity. We evaluated the correlation of specific endometrial marker expression levels with reproductive outcomes.</p><p><strong>Results: </strong>Phenotypic assessments revealed elevated endometrial Fe<sup>2+</sup> accumulation, antioxidant dysfunction, mitochondrial damage, and enhanced estrogen/androgen receptor expression in PCOS models. DPP4 inhibition via sitagliptin improved decidualization responses and receptivity markers in rats prior to pregnancy. In T-HESCs, downregulated DPP4 could suppress hormone receptor expression and ferroptosis markers. Functional validation using BeWo spheroid implantation assays demonstrated restored endometrial receptivity following DPP4 intervention. Mechanistically, DPP4-driven ferroptosis exacerbated PCOS-associated endometrial dysfunction, while its suppression would enhance stromal cell decidualization capacity and implantation potential. Consistent with these findings, evaluation of endometrial specimens from PCOS patients confirmed a marked reversal of ferroptosis-related markers following sitagliptin intervention, which was further associated with significantly improved reproductive outcomes, including higher clinical pregnancy and live birth rates.</p><p><strong>Conclusion: </strong>Reducing DPP4 expression not only inhibited ferroptosis but also improved the PCOS phenotype of the endometrium, ultimately influencing changes in endometrial receptivity, and indicating the ferroptosis-related protein DPP4 as a promising therapeutic target.</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":"16 1","pages":"107"},"PeriodicalIF":5.1,"publicationDate":"2025-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12729179/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145817756","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-19DOI: 10.1186/s13293-025-00808-2
Stacey A Ritz, L Zachary DuBois
Debates about the nature of sex are prominent in scientific, scholarly and public discourses. Scientific as well as societal debates largely focus on whether sex is appropriately conceptualized as a binary, a spectrum, or some other form. These have taken on particular urgency because of highly contested, polarizing, and consequential developments in the global landscape in which the political weaponization of binary sex has escalated. Here we propose three frameworks useful for retaining focus on why sex might be conceptualized in a certain way to address the aims of a given project to help avoid pitting binary versus non-binary approaches against one another in a continued impasse. These three frameworks are (a) sex as a system of classification, (b) sex as a trait, and (c) sex as a dynamic system. We also provide a series of questions and considerations to guide a critical read of scholarship and scientific engagement of sex in ways that might help mitigate the isolating effects of disciplinary silos and advance cross-disciplinary dialogue and collaboration. Thus, rather than recapitulating discussions of how sex should be conceptualized or trying to establish a universally applicable definition of sex, these three frameworks and guiding questions can be drawn on to consider why certain projects might employ particular definitions and methods of operationalization of sex over others, and outline the merits and drawbacks of each. By refocusing our scholarly attention on what sex is empirically being employed to do and why, and providing these frameworks to think with, we hope to bring some essential bridging between those for and those against binary thinking about sex and foster a diversity of approaches that might more effectively build on one another rather than exist in opposition. We can then continue to try to nimbly engage what it is sex is being leveraged to do and why in order to ask how a given conceptualization will help us to learn about a given phenomenon.
{"title":"Reframing the sex debate in scientific research: three frameworks to support rigor without rigidity.","authors":"Stacey A Ritz, L Zachary DuBois","doi":"10.1186/s13293-025-00808-2","DOIUrl":"10.1186/s13293-025-00808-2","url":null,"abstract":"<p><p>Debates about the nature of sex are prominent in scientific, scholarly and public discourses. Scientific as well as societal debates largely focus on whether sex is appropriately conceptualized as a binary, a spectrum, or some other form. These have taken on particular urgency because of highly contested, polarizing, and consequential developments in the global landscape in which the political weaponization of binary sex has escalated. Here we propose three frameworks useful for retaining focus on why sex might be conceptualized in a certain way to address the aims of a given project to help avoid pitting binary versus non-binary approaches against one another in a continued impasse. These three frameworks are (a) sex as a system of classification, (b) sex as a trait, and (c) sex as a dynamic system. We also provide a series of questions and considerations to guide a critical read of scholarship and scientific engagement of sex in ways that might help mitigate the isolating effects of disciplinary silos and advance cross-disciplinary dialogue and collaboration. Thus, rather than recapitulating discussions of how sex should be conceptualized or trying to establish a universally applicable definition of sex, these three frameworks and guiding questions can be drawn on to consider why certain projects might employ particular definitions and methods of operationalization of sex over others, and outline the merits and drawbacks of each. By refocusing our scholarly attention on what sex is empirically being employed to do and why, and providing these frameworks to think with, we hope to bring some essential bridging between those for and those against binary thinking about sex and foster a diversity of approaches that might more effectively build on one another rather than exist in opposition. We can then continue to try to nimbly engage what it is sex is being leveraged to do and why in order to ask how a given conceptualization will help us to learn about a given phenomenon.</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":"16 1","pages":"106"},"PeriodicalIF":5.1,"publicationDate":"2025-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12717726/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145793141","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-17DOI: 10.1186/s13293-025-00788-3
Julia I Neuharth, K Stephanie Hernandez, Jacob Bernholtz, Hadley Edwards, Adele Stewart
Background: Women are nearly twice as likely to be diagnosed with Alzheimer's Disease (AD) over their lifetime. However, historically, preclinical studies utilizing AD rodent models to define new therapeutic targets in AD treatment have neglected to consider the confounding influence of subject sex leading to a lack of mechanistic insight into the biological underpinnings of sex bias in AD.
Methods: Here, we tracked choice of subject sex over the twenty-year history of the 5xFAD mouse, one of the most frequently cited pre-clinical AD models. We analyzed 1,330 primary research articles indexed on PubMed and recorded information provided regarding subject sex and/or as a rationale for not including datasets separated by sex, if noted. Trends were then plotted as a function of time ending in December 2024.
Results: In the last 15 years, the number of published manuscripts on the 5xFAD model omitting information on subject sex has progressively declined. However, the proportion of studies utilizing either males only (29%) or combining data from both sexes (24%) far surpasses studies acknowledging sex as a biological variable (SABV) (< 12%) with no significant changes noted over time. On average, the ratio of male only: female only studies of 5xFAD mice hovered around 2:1. The most frequently cited reason for omitting sex-based analyses was either a lack of sex differences found (29%), accelerated development of plaque burden in 5xFAD females (17%), or the possibility of within- or between-sex variability (15%). Mention of SABV has steadily increased in studies utilizing 5xFAD mice peaking at ~ 30% of manuscripts published in 2024. However, two key confounds in the 5xFAD model, including the potential impact of an estrogen response element (ERE) and parental imprinting in the Thy1 promoter driving transgene expression, have been largely ignored.
Conclusions: The 5xFAD model represents a compelling example of how neglecting to recognize the impact of biological sex on neural function can compromise study design and data interpretation. Given sex-dependent Thy1 promoter regulation may skew phenotypic outcomes, investigators should judiciously interpret sex differences observed in any AD mouse utilizing the Thy1 promoter to drive transgene expression.
{"title":"Consideration of sex as a biological variable over the history of the 5xFAD Alzheimer's Disease mouse model.","authors":"Julia I Neuharth, K Stephanie Hernandez, Jacob Bernholtz, Hadley Edwards, Adele Stewart","doi":"10.1186/s13293-025-00788-3","DOIUrl":"10.1186/s13293-025-00788-3","url":null,"abstract":"<p><strong>Background: </strong>Women are nearly twice as likely to be diagnosed with Alzheimer's Disease (AD) over their lifetime. However, historically, preclinical studies utilizing AD rodent models to define new therapeutic targets in AD treatment have neglected to consider the confounding influence of subject sex leading to a lack of mechanistic insight into the biological underpinnings of sex bias in AD.</p><p><strong>Methods: </strong>Here, we tracked choice of subject sex over the twenty-year history of the 5xFAD mouse, one of the most frequently cited pre-clinical AD models. We analyzed 1,330 primary research articles indexed on PubMed and recorded information provided regarding subject sex and/or as a rationale for not including datasets separated by sex, if noted. Trends were then plotted as a function of time ending in December 2024.</p><p><strong>Results: </strong>In the last 15 years, the number of published manuscripts on the 5xFAD model omitting information on subject sex has progressively declined. However, the proportion of studies utilizing either males only (29%) or combining data from both sexes (24%) far surpasses studies acknowledging sex as a biological variable (SABV) (< 12%) with no significant changes noted over time. On average, the ratio of male only: female only studies of 5xFAD mice hovered around 2:1. The most frequently cited reason for omitting sex-based analyses was either a lack of sex differences found (29%), accelerated development of plaque burden in 5xFAD females (17%), or the possibility of within- or between-sex variability (15%). Mention of SABV has steadily increased in studies utilizing 5xFAD mice peaking at ~ 30% of manuscripts published in 2024. However, two key confounds in the 5xFAD model, including the potential impact of an estrogen response element (ERE) and parental imprinting in the Thy1 promoter driving transgene expression, have been largely ignored.</p><p><strong>Conclusions: </strong>The 5xFAD model represents a compelling example of how neglecting to recognize the impact of biological sex on neural function can compromise study design and data interpretation. Given sex-dependent Thy1 promoter regulation may skew phenotypic outcomes, investigators should judiciously interpret sex differences observed in any AD mouse utilizing the Thy1 promoter to drive transgene expression.</p>","PeriodicalId":8890,"journal":{"name":"Biology of Sex Differences","volume":"16 1","pages":"105"},"PeriodicalIF":5.1,"publicationDate":"2025-12-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12709748/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145773359","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}