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Automated underwater imaging system for continuous biofouling assessment. 用于连续生物污染评估的自动水下成像系统。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-01 Epub Date: 2026-01-15 DOI: 10.1080/08927014.2025.2610308
J Anani, K Dam-Johansen, J A H Dreyer

Traditional antifouling coating evaluations rely on manual sample retrieval, imaging and subjective visual assessments, which are labour-intensive and constrained by infrequent sampling intervals that may overlook critical fouling developments. This study presents a novel, automated biofouling assessment system at the CoaST Maritime Test Centre. A custom underwater camera captures daily images, while advanced image analysis techniques track fouling progression. To address imaging challenges, a median stacking technique removes transient artefacts such as overhanging algae and floating debris, enabling accurate assessment of attachment points, the primary metric for biofouling coverage. Multi-exposure fusion enhances image illumination. For image analysis, ilastik, a machine-learning tool using a random forest algorithm, performs pixel classification segmentation to differentiate biofouling classes and monitor their growth. This automated approach improves accuracy, repeatability and efficiency in biofouling assessment, reducing subjectivity and enhancing antifouling research.

传统的防污涂层评估依赖于人工取样、成像和主观视觉评估,这是一项劳动密集型工作,并且受到采样间隔不频繁的限制,可能会忽略关键的污垢发展。本研究在CoaST海事测试中心提出了一种新型的自动化生物结垢评估系统。一个定制的水下相机捕捉日常图像,而先进的图像分析技术跟踪污垢的进展。为了解决成像问题,中值叠加技术可以去除悬垂藻类和漂浮碎片等瞬态伪影,从而准确评估附着点,这是生物污垢覆盖的主要指标。多曝光融合增强图像照明。对于图像分析,ilastik是一种使用随机森林算法的机器学习工具,它执行像素分类分割,以区分生物污垢类别并监测它们的生长。这种自动化方法提高了生物污染评估的准确性、可重复性和效率,减少了主观性,加强了防污研究。
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引用次数: 0
Antifouling compounds from marine fungus Aspergillus iizukae GXIMD 00548. 海洋真菌猪曲霉GXIMD 00548的防污化合物。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-01 Epub Date: 2026-01-15 DOI: 10.1080/08927014.2025.2610823
Chun-Qing Fu, Meng-Fan Qi, Chun-Xiao Chen, Hua-Qing Huang, Xiao-Wei Luo, Cheng-Hai Gao, Yong-Hong Liu, Xin-Ya Xu

Twenty-three phenolic acids (1-23), including three novel sulfur-containing derivatives, along with five alkaloids (24-28) were isolated from the marine-derived fungus Aspergillus iizukae GXIMD 00548. Their structures were elucidated through comprehensive spectroscopic analysis and comparison with literature. All isolated compounds were evaluated for antifouling activities against barnacle larval settlement. Compounds 1-6, 8-11, 13, 20, 22 and 24-26 exhibited potent antifouling effects with median effect concentration (EC50) values ranging from 0.03 to 11.03 μg/mL. Additionally, compounds 9, 10 and 13 showed acetylcholinesterase (AChE) inhibitory effects with half maximal inhibitory concentration (IC50) values of 49.67 ± 0.08, 77.69 ± 0.09, and 127.5 ± 0.09 μM, respectively.

从海洋源真菌猪曲霉GXIMD 00548中分离得到23个酚酸(1 ~ 23),包括3个新的含硫衍生物,以及5个生物碱(24 ~ 28)。通过综合光谱分析和文献比较,对其结构进行了鉴定。所有分离得到的化合物对藤壶幼虫沉降的防污活性进行了评价。化合物1 ~ 6、8 ~ 11、13、20、22和24 ~ 26具有较强的防污效果,中位效应浓度(EC50)为0.03 ~ 11.03 μg/mL。化合物9、10和13对乙酰胆碱酯酶(AChE)有抑制作用,半数最大抑制浓度(IC50)分别为49.67±0.08 μM、77.69±0.09 μM和127.5±0.09 μM。
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引用次数: 0
Ocimum gratissimum (Linnaeus) essential oil disrupts Candida albicans biofilms via morphogenetic suppression and stress reprogramming: translational implications for antifungal prophylaxis. 桉树精油通过形态发生抑制和应激重编程破坏白色念珠菌生物膜:抗真菌预防的翻译意义。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-02-01 Epub Date: 2026-01-19 DOI: 10.1080/08927014.2025.2610314
Dang Anh Tuan, Jan Masak

Ocimum gratissimum L. (African basil) is widely used in ethnomedicine to treat infectious and inflammatory conditions, yet its antifungal mechanisms remain unclear. In this study, we evaluated the essential oil of O. gratissimum L. (OGEO) against Candida albicans biofilms, a clinically relevant driver of antifungal resistance in device-associated infections. Gas chromatography-mass spectrometry identified eugenol as the predominant constituent (59.5%), supported by terpenoid and sesquiterpene derivatives. Functional assays demonstrated potent antibiofilm activity, as exposure to 1% and 2% OGEO reduced viable biofilm cells by >2 log10 CFU/biofilm at Day 1 and sustained ∼70% inhibition at Day 3, with corresponding biomass reductions of ∼65% and ∼80%, respectively. Confocal microscopy revealed marked thinning and fragmentation of hyphal networks, while scanning electron microscopy confirmed collapse of extracellular matrix architecture. Kinetic modeling showed that OGEO induced an intermediate suppression profile, delaying biofilm recovery compared to untreated controls and fluconazole (which permitted ∼90% regrowth by Day 7), but without the sustained fungicidal effect observed with caspofungin (>80% suppression). Transcriptomic profiling at Day 3 identified 463 differentially expressed genes, with strong repression of hyphal regulators (HWP1, ALS3, EFG1, BCR1) and extracellular matrix-associated genes (FKS1, ZAP1), alongside upregulation of oxidative and proteotoxic stress pathways (SOD5, HSP90, MAPK signaling). Together, these data suggest that OGEO functions as a biofilm modulator rather than a fungicidal agent, weakening structural resilience and redirecting C. albicans into a stress-adaptive state. Clinically, this modulatory activity-marked by early biomass suppression, matrix destabilization, and transcriptional remodeling-highlights OGEO's potential as a prophylactic or adjunctive strategy in device-associated candidiasis. Applications may include medical device coatings or topical formulations that prevent biofilm initiation and enhance susceptibility to existing antifungal drugs.

非洲罗勒(Ocimum gratissimum L.)在民族医学中被广泛用于治疗感染性和炎症性疾病,但其抗真菌机制尚不清楚。在这项研究中,我们评估了O. gratissimum L. (OGEO)精油对白色念珠菌生物膜的作用,白色念珠菌生物膜是器械相关感染中抗真菌耐药性的临床相关驱动因素。气相色谱-质谱分析鉴定丁香酚为主要成分(59.5%),由萜类和倍半萜类衍生物支持。功能测试显示了有效的抗生物膜活性,暴露于1%和2%的OGEO在第1天使活的生物膜细胞减少了约2 log10 CFU/生物膜,在第3天持续了约70%的抑制,相应的生物量分别减少了约65%和约80%。共聚焦显微镜显示菌丝网络明显变薄和断裂,而扫描电镜证实细胞外基质结构崩溃。动力学模型显示,与未经处理的对照和氟康唑相比,OGEO诱导了中度抑制,延迟了生物膜的恢复(第7天允许~ 90%的再生),但没有caspofungin观察到的持续的杀真菌效果(抑制80%)。第3天的转录组学分析鉴定出463个差异表达基因,其中菌丝调节基因(HWP1, ALS3, EFG1, BCR1)和细胞外基质相关基因(FKS1, ZAP1)受到强烈抑制,氧化和蛋白毒性应激途径(SOD5, HSP90, MAPK信号传导)上调。综上所述,这些数据表明,OGEO的功能是作为生物膜调节剂而不是杀菌剂,削弱了结构弹性,并将白色念珠菌重定向到应激适应状态。临床上,这种以早期生物量抑制、基质不稳定和转录重塑为特征的调节活性突出了OGEO作为器械相关念珠菌病预防或辅助策略的潜力。应用可能包括医疗器械涂层或局部配方,以防止生物膜的形成并增强对现有抗真菌药物的敏感性。
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引用次数: 0
Characterization of β-lactam resistance in dual-species biofilms of Pseudomonas aeruginosa and methicillin-sensitive Staphylococcus aureus. 铜绿假单胞菌和甲氧西林敏感金黄色葡萄球菌双种生物膜中β-内酰胺耐药性的研究。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-28 DOI: 10.1080/08927014.2026.2620072
Waleska S da Cruz Nizer, Kira N Allison, Carole Beaulieu, Megan C Montgomery, Edana Cassol, Joerg Overhage

Polymicrobial biofilms are frequently associated with chronic infections and are highly tolerant to antibiotic treatment. Given that β-lactam antibiotics are the most prescribed antibiotics worldwide, we investigated β-lactam resistance in dual-species biofilms formed by Pseudomonas aeruginosa PAO1 and methicillin-sensitive Staphylococcus aureus (MSSA). Compared to monocultures, MSSA exhibited reduced susceptibility to cephalexin, ampicillin, and cefazolin, while P. aeruginosa showed reduced susceptibility to cefazolin and nafcillin within dual-species biofilms. Using a set of P. aeruginosa mutants, we demonstrate that the PAO1 AmpC β-lactamase, the exopolysaccharides Psl and Pel, and the quorum sensing regulators LasR and RhlR each play significant roles in protecting MSSA from β-lactam treatment. Interestingly, co-cultures of MSSA with the ΔpslA pelF mutant strain increased the survival of ΔpslA pelF under β-lactam exposure. Overall, these findings advance our understanding of how interdependent bacterial interactions compensate for the loss of matrix components and thereby contribute to antimicrobial tolerance in polymicrobial biofilms.

多微生物生物膜通常与慢性感染有关,并且对抗生素治疗具有高度耐受性。鉴于β-内酰胺类抗生素是世界范围内处方最多的抗生素,我们研究了铜绿假单胞菌PAO1和甲氧西林敏感金黄色葡萄球菌(MSSA)形成的双种生物膜中β-内酰胺的耐药性。与单一培养相比,MSSA对头孢氨苄、氨苄西林和头孢唑林的敏感性降低,而铜绿假单胞菌在双种生物膜中对头孢唑林和萘西林的敏感性降低。利用一组铜绿假单胞菌突变体,我们证明了PAO1 AmpC β-内酰胺酶、胞外多糖Psl和Pel以及群体感应调节因子LasR和RhlR在保护MSSA免受β-内酰胺处理方面都发挥了重要作用。有趣的是,MSSA与ΔpslA pelF突变株共培养增加了ΔpslA pelF在β-内酰胺暴露下的存活率。总的来说,这些发现促进了我们对细菌相互作用如何补偿基质成分损失的理解,从而促进了多微生物生物膜的抗微生物耐受性。
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引用次数: 0
The action of selected monoterpenes as biofilm control agents and antibiotic resistance modifiers. 选定的单萜烯作为生物膜控制剂和抗生素抗性调节剂的作用。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-19 DOI: 10.1080/08927014.2026.2615081
Francisca Massano, Ana C Afonso, Mariana Sousa, Lília S Teixeira, Anabela Borges, Manuel Simões

Multidrug-resistant bacteria in biofilms are a growing public health threat, due to their resistance to conventional antibiotics. Phytochemicals are attractive candidates because of their structural diversity and ability to potentiate antimicrobial activity. This study investigated the antibiofilm and resistance-modifying effects of two monoterpenes, menthol and linalool, alone and in combination with ten antibiotics, against Escherichia coli and Staphylococcus epidermidis. Menthol exhibited MIC and MBC of 800 µg/mL against E. coli and the same MIC against S. epidermidis, while linalool showed MICs of 800 µg/mL and 400 µg/mL, respectively. Combination assays revealed enhanced activity of erythromycin with both monoterpenes against E. coli and of amoxicillin with menthol against S. epidermidis, although sessile cells were largely unaffected. When applied individually, both monoterpenes caused a 3-log reduction in culturable E. coli biofilm cells. The overall findings highlight the antibiofilm activity of linalool and, particularly, menthol, supporting their role as antibiotic adjuvants against biofilm-associated infections.

生物膜中的多重耐药细菌由于对常规抗生素具有耐药性,已成为日益严重的公共卫生威胁。植物化学物质因其结构多样性和增强抗菌活性的能力而成为有吸引力的候选物质。本实验研究了薄荷醇和芳樟醇两种单萜单用和联用10种抗生素对大肠杆菌和表皮葡萄球菌的抗菌膜和耐药修饰作用。薄荷醇对大肠杆菌的MIC和MBC均为800µg/mL,对表皮葡萄球菌的MIC均为800µg/mL,芳樟醇的MIC分别为400µg/mL。联合试验显示,红霉素与单萜烯对大肠杆菌的活性增强,阿莫西林与薄荷醇对表皮葡萄球菌的活性增强,但无根细胞在很大程度上不受影响。当单独应用时,两种单萜烯导致可培养的大肠杆菌生物膜细胞减少3倍。总体发现强调了芳樟醇的抗生物膜活性,特别是薄荷醇,支持它们作为抗生素佐剂对抗生物膜相关感染的作用。
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引用次数: 0
Leonard V. "Len" Evans (1937-2023): In Memoriam and Article Collection. 伦纳德V。“莱恩”埃文斯(1937-2023):纪念和文章收藏。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-01 Epub Date: 2026-01-21 DOI: 10.1080/08927014.2026.2616070
Manuel Simões, Sergey Dobretsov
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引用次数: 0
Navigating towards sustainable antifouling solutions. 走向可持续的防污解决方案。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-01 Epub Date: 2026-01-02 DOI: 10.1080/08927014.2025.2597851
Sergey Dobretsov
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引用次数: 0
Enhancing the efficacy and selectivity of novel antimicrobial peptides against methicillin-resistant Staphylococcus aureus through computational and experimental approaches. 通过计算和实验方法提高新型抗菌肽对耐甲氧西林金黄色葡萄球菌的有效性和选择性。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-01 Epub Date: 2026-01-04 DOI: 10.1080/08927014.2025.2604263
Parweenuch Santaweesuk, Worada Khumbungkha, Thararin Ngamsiri, Chonlatip Pipattanaboon, Supranee Phanthanawiboon, Watshara Shoombuatong, Sakawrat Kanthawong

Methicillin-resistant Staphylococcus aureus (MRSA) poses a major global health threat and is recognized by the World Health Organization as a high-priority pathogen for new drug development. MRSA's ability to form biofilms further complicates treatment and enhances antibiotic resistance. Antimicrobial peptides (AMPs) present a promising alternative to conventional antibiotics, however, their discovery remains labor-intensive. This study utilized computational and experimental approaches to evaluate the physicochemical properties, anti-MRSA activity against 10 clinical isolates, bacterial selectivity, cytotoxicity, and antibiofilm effects of AMPs. Temporin-PF (TPF) peptide was identified as a leading candidate and modified to generate TPF-M1, achieving an improved anti-MRSA score of 600.0. TPF-M1 exhibited enhanced killing activity and selectivity against MRSA with low toxicity toward human cells. At 20 µM, TPF-M1 effectively reduced MRSA biofilm viability using the transferable solid-phase pin lid method and disrupted the biofilm structure. These findings underscore the potential of AI-guided AMP development for anti-MRSA therapy.

耐甲氧西林金黄色葡萄球菌(MRSA)对全球健康构成重大威胁,被世界卫生组织认定为新药开发的高优先级病原体。MRSA形成生物膜的能力使治疗变得更加复杂,并增强了抗生素耐药性。抗菌肽(AMPs)是传统抗生素的一个很有前途的替代品,然而,它们的发现仍然是劳动密集型的。本研究利用计算和实验方法评估了amp的理化性质、抗mrsa活性、细菌选择性、细胞毒性和抗生物膜作用。Temporin-PF (TPF)肽被确定为主要候选,并被修饰为TPF- m1,获得了600.0的抗mrsa评分。TPF-M1对MRSA具有较强的杀伤活性和选择性,对人体细胞毒性低。在20µM时,TPF-M1使用可转移固相针盖法有效地降低了MRSA生物膜的活力,破坏了生物膜结构。这些发现强调了ai引导的AMP开发抗mrsa治疗的潜力。
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引用次数: 0
Polymicrobial periprosthetic joint infection: eradication with different antimicrobials. 多微生物假体周围关节感染:不同抗菌剂的根除。
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-12-14 DOI: 10.1080/08927014.2025.2591166
Daniyil Semeshchenko, Alicia Farinati, Iván Huespe, Martin A Buttaro, Pablo A Slullitel

Antibiotics incorporated into spacers do not guarantee complete eradication of infection. This study aimed to compare, in vitro, the antimicrobial activity of antibiotic-loaded cement with and without additional alternative antimicrobial molecules for the eradication of polymicrobial biofilms. Methicillin-resistant Staphylococcus aureus (MRSA), Pseudomonas aeruginosa (PA), and Candida albicans (CA) were selected to form mono- and polymicrobial biofilms on polyurethane sponges. Bone cement was supplemented with vancomycin, imipenem, silver nitrate (SN), and xylitol in different combinations. In monomicrobial biofilms, the combination of vancomycin + SN + xylitol showed superior activity against MRSA compared with other formulations. In polymicrobial biofilms, the combinations imipenem + vancomycin + xylitol, imipenem + vancomycin + SN, and imipenem + vancomycin + SN + xylitol were most effective in eradicating PA. For MRSA, all combinations achieved complete eradication, whereas CA eradication remained incomplete. Overall, the inclusion of SN and xylitol in cement improved antimicrobial performance compared with antibiotic-only formulations.

植入隔离剂的抗生素并不能保证完全根除感染。本研究旨在比较,在体外,抗生素负载水泥的抗菌活性与没有额外的替代抗菌分子根除多微生物生物膜。选择耐甲氧西林金黄色葡萄球菌(MRSA)、铜绿假单胞菌(PA)和白色念珠菌(CA)在聚氨酯海绵上形成单微生物和多微生物生物膜。在骨水泥中添加万古霉素、亚胺培南、硝酸银、木糖醇等不同组合。在单微生物生物膜中,万古霉素+ SN +木糖醇组合对MRSA的抑制作用优于其他组合。在多微生物生物膜中,亚胺培南+万古霉素+木糖醇、亚胺培南+万古霉素+ SN、亚胺培南+万古霉素+ SN +木糖醇对PA的根除效果最好。对于MRSA,所有组合都实现了完全根除,而CA仍然不完全根除。总体而言,与仅含抗生素的配方相比,在水泥中加入SN和木糖醇可提高其抗菌性能。
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引用次数: 0
Impact of biofilm model of Streptococcus mutans on the pH, ions release, and sorption/solubility of glass ionomer cements enriched with 45S5 bioglass. 变形链球菌生物膜模型对富含45S5生物玻璃的玻璃离子聚合物水泥的pH、离子释放和吸附/溶解度的影响
IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2026-01-01 Epub Date: 2025-12-15 DOI: 10.1080/08927014.2025.2601045
Fábia Regina Vieira de Oliveira Roma, Mayron Guedes Silva, Tarcisio Jorge Leitão de Oliveira, José Bauer, Leily Macedo Firoozmand

Resin materials enriched with bioglass (45S5) could potentially improve the physicochemical properties of dental materials. Specimens were categorized into five groups: (GIC)- conventional glass ionomer cement; (RMGIC.1)- resin-modified GIC with non-lyophilised polyacrylic acid, (RMGIC.1_45S5)- RMGIC.1 with 45S5 (10 w/w%); (RMGIC.2)- resin-modified GIC with freeze-dried polyacrylic acid; and (RMGIC.2_45S5)- RMGIC.2 with 45S5 (10 w/w%). The specimens were tested at acid/neutral pH, and the antibacterial activity colony-forming units (CFU/mg), sorption, solubility, calcium ion release, and bioactivity were measured in a Streptococcus mutans biofilm model. Analysis of variance and Scheffe/Tukey statistical tests were used. The 45S5 in the RMGICs resulted in higher alkalinization and the formation of calcium/phosphorus precipitates. RMGIC.1_45S5 improved pH stability and increased the sorption and solubility. In the S.mutans biofilm, none of the materials significantly increased the pH. The enrichment of RMGIC.1 (45S5) increased the sorption, solubility, calcium release, and showed bioactivity, but had no antimicrobial effect on the S.mutans biofilm model.

富含生物玻璃(45S5)的树脂材料有可能改善牙科材料的理化性能。样品分为五组:(GIC)-常规玻璃离子水门合剂;(RMGIC.1)-含非冻干聚丙烯酸的树脂改性GIC, (RMGIC.1_45S5)- RMGIC.1含45S5 (10w /w%);(RMGIC.2)-冻干聚丙烯酸树脂改性GIC;和(RMGIC.2_45S5)- RMGIC.2 with 45S5 (10 w/w%)。在酸性/中性pH下检测样品,并在变形链球菌生物膜模型中测定其抗菌活性菌落形成单位(CFU/mg)、吸附、溶解度、钙离子释放和生物活性。采用方差分析和Scheffe/Tukey统计检验。rmgic中的45S5导致较高的碱化和钙/磷沉淀的形成。RMGIC.1_45S5改善了pH稳定性,提高了吸附和溶解度。在变形链球菌生物膜中,没有一种物质显著提高ph值。RMGIC.1 (45S5)的富集增加了其吸附、溶解、钙释放,并显示出生物活性,但对变形链球菌生物膜模型没有抑菌作用。
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引用次数: 0
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