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An antimicrobial metabolite n- hexadecenoic acid from marine sponge-associated bacteria Bacillus subtilis effectively inhibited biofilm forming multidrug-resistant P. aeruginosa. 海洋海绵相关细菌枯草芽孢杆菌的抗菌代谢物正十六烯酸有效抑制多重耐药铜绿假单胞菌的生物膜形成。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 DOI: 10.1080/08927014.2023.2232722
Arya Sajayan, Amrudha Ravindran, Joseph Selvin, Prathiviraj Ragothaman, George Seghal Kiran

Effective drug candidates to obstruct the emergence of multidrug-resistant pathogens have become a major concern. A potent antimicrobial producer was isolated from a marine sponge designated as MSI38 and was identified as Bacillus subtilis by 16SrDNA sequencing. The active antimicrobial fraction was purified, and the metabolite was identified as n-hexadecanoic acid by spectroscopic analysis. The fish-borne pathogen Pseudomonas aeruginosa FP012 was found to be multidrug-resistant and poses a risk of disease to food handlers and consumers in general. The compound showed a potent bactericidal effect against P. aeruginosa FP012 with a MIC of 31.33 ± 5.67 mg L-1 and MBC of 36.66 ± 5.17 mg L-1. The time-based biofilm inhibitory potential of MSI38 and ciprofloxacin was analyzed by confocal laser scanning microscopy. A synergistic effect of MSI38 and ciprofloxacin on biofilm showed 85% inhibition.

有效的候选药物来阻止多药耐药病原体的出现已经成为一个主要关注的问题。从海绵中分离到一株高效抑菌菌MSI38,经16SrDNA测序鉴定为枯草芽孢杆菌(Bacillus subtilis)。对活性抗菌部位进行了纯化,代谢产物经光谱分析鉴定为正十六酸。鱼类传播的病原体铜绿假单胞菌FP012被发现具有多重耐药性,并对食品处理人员和一般消费者构成疾病风险。该化合物对铜绿假单胞菌(P. aeruginosa FP012)有较强的杀菌作用,MIC为31.33±5.67 mg L-1, MBC为36.66±5.17 mg L-1。用激光共聚焦扫描显微镜分析了MSI38和环丙沙星的时间基生物膜抑制电位。MSI38和环丙沙星对生物膜有85%的协同抑制作用。
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引用次数: 0
Interspecies interactions in mixed-species biofilms formed by Enterococcus faecalis and gram-negative bacteria isolated from polymicrobial diabetic foot ulcers. 从多微生物糖尿病足溃疡中分离的粪肠球菌和革兰氏阴性菌形成的混合物种生物膜中的种间相互作用。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 Epub Date: 2023-07-24 DOI: 10.1080/08927014.2023.2236949
Florencia Mariani, Guillermo E Juarez, Claudia Barberis, Florencia Veiga, Carlos Vay, Estela M Galvan

Diabetic foot ulcers (DFU) are exacerbated by bacterial colonisation. Here, a high prevalence of Enterococcus faecalis was observed in DFU patients from an Argentinean hospital. E. faecalis was frequently co-isolated with Escherichia coli, Morganella morganii, and Pseudomonas aeruginosa. The effect of interspecies interactions on bacterial growth was investigated in mixed-species macrocolony biofilms developed in Lubbock-Glc-agar. Similar cell counts were found for E. faecalis and M. morganii growing in mixed and single-species biofilms. An E. faecalis strain showed 1 Log higher cell counts in mixed biofilms with E. coli. Remarkably, E. faecalis strains showed 2 to 4 Log higher cell counts in mixed biofilms with P. aeruginosa. This effect was not observed in planktonic growth or biofilms developed in tryptic soy agar. The present findings reveal bacterial interactions that benefit E. faecalis in mixed-species biofilms, mainly with P. aeruginosa, in a medium that partially mimics the nutrients found in DFU.

糖尿病足溃疡(DFU)因细菌定植而加剧。在这里,在一家阿根廷医院的DFU患者中观察到粪肠球菌的高患病率。粪大肠杆菌经常与大肠杆菌、Morganella morganii和铜绿假单胞菌共分离。在Lubbock Glc琼脂中制备的混合物种大菌落生物膜中,研究了种间相互作用对细菌生长的影响。在混合生物膜和单一物种生物膜中生长的粪大肠杆菌和莫氏分枝杆菌的细胞计数相似。粪便大肠杆菌菌株在与大肠杆菌混合的生物膜中显示出高出1Log的细胞计数。值得注意的是,在与铜绿假单胞菌混合的生物膜中,粪便大肠杆菌菌株的细胞计数高出2至4Log。在胰蛋白酶大豆琼脂中形成的浮游生物生长或生物膜中没有观察到这种影响。目前的研究结果揭示了在部分模拟DFU中发现的营养物质的培养基中,混合物种生物膜中的细菌相互作用对粪肠球菌有益,主要是与铜绿假单胞菌的相互作用。
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引用次数: 0
Evaluation of lipophosphoramidates-based amphiphilic compounds on the formation of biofilms of marine bacteria. 基于脂磷酰胺的两亲性化合物对海洋细菌生物膜形成的评价。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 Epub Date: 2023-08-16 DOI: 10.1080/08927014.2023.2241377
Dorsaf Malouch, Mathieu Berchel, Catherine Dreanno, Sabine Stachowski-Haberkorn, Morgane Chalopin, Yoann Godfrin, Paul-Alain Jaffrès

The bacteriostatic and/or bactericidal properties of few phosphoramide-based amphiphilic compounds on human pathogenic bacteria were previously reported. In this study, the potential of two cationic (BSV36 and KLN47) and two zwitterionic (3 and 4) amphiphiles as inhibitors of marine bacterial growth and biofilm formation were investigated. Results showed that the four compounds have little impact on the growth of a panel of 18 selected marine bacteria at a concentration of 200 µM, and up to 700 µM for some bacterial strains. Interestingly, cationic lipid BSV36 and zwitterionic lipids 3 and 4 effectively disrupt biofilm formation of Paracoccus sp. 4M6 and Vibrio sp. D02 at 200 µM and to a lesser extent of seven other bacterial strains tested. Moreover, ecotoxicological assays on four species of microalgae highlighted that compounds 3 and 4 have little impact on microalgae growth with EC50 values of 51 µM for the more sensitive species and up to 200 µM for most of the others. Amphiphilic compounds, especially zwitterionic amphiphiles 3 and 4 seem to be promising candidates against biofilm formation by marine bacteria.

先前报道了几种基于磷酰胺的两亲性化合物对人类致病菌的抑菌和/或杀菌性能。在本研究中,研究了两种阳离子(BSV36和KLN47)和两种两性离子(3和4)两亲物作为海洋细菌生长和生物膜形成抑制剂的潜力。结果表明,在浓度为200的条件下,这四种化合物对18种选定的海洋细菌的生长几乎没有影响 µM,最高可达700 µM。有趣的是,阳离子脂质BSV36和两性离子脂质3和4在200 µM,并且在较小程度上测试了其他七种细菌菌株。此外,对四种微藻的生态毒理学分析强调,化合物3和4对微藻生长的影响很小,EC50值为51 µM,适用于更敏感的物种,最高可达200 µM。两亲性化合物,特别是两性离子两亲性3和4似乎是对抗海洋细菌形成生物膜的有前途的候选者。
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引用次数: 1
The combined effect of essential oils on wood physico-chemical properties and their antiadhesive activity against mold fungi: application of mixture design methodology. 精油对木材物理化学性质的综合影响及其对霉菌的抗粘附活性:混合物设计方法的应用。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 Epub Date: 2023-07-21 DOI: 10.1080/08927014.2023.2236029
Moulay Sadiki, Mounyr Balouiri, Soumya Elabed, Fadoua Bennouna, Mohammed Lachkar, Saad Ibnsouda Koraichi

In the heritage field, the microbial adhesion on wood, and consequently the formation of biofilm led to inestimable losses of historical and cultural monuments. Thereby, this study aimed to examine the combined effect of Thymus vulgaris, Myrtus communis, and Mentha pulegium essential oils on wood surface physico-chemical properties, and to elaborate the optimal mixture using the mixture design approach coupled to the contact angle method. It was found that both wood hydrophobicity and electron donor character increased significantly after treatment using an optimal mixture containing 57% and 43% of M. pulegium and M. communis essential oils, respectively. The theoretical and experimental fungal adhesion on untreated and treated wood were also investigated. The results showed that the adhesion was favorable on untreated wood and reduced using the optimal mixture. Moreover, the experimental data demonstrated that the same mixture exhibited an antiadhesive efficacy effect with a reduction of 36-75% in adhesion.

在遗产领域,微生物粘附在木材上,从而形成生物膜,导致历史文化古迹损失不可估量。因此,本研究旨在检验百里香、杨梅和薄荷精油对木材表面物理化学性质的综合影响,并采用混合物设计法结合接触角法来制定最佳混合物。研究发现,使用分别含有57%和43%的M.pulegium和M.commons精油的最佳混合物处理后,木材的疏水性和电子供体特性都显著提高。还对真菌在未处理和处理木材上的粘附进行了理论和实验研究。结果表明,使用最佳混合物,未处理木材的附着力良好,降低了附着力。此外,实验数据表明,相同的混合物表现出抗粘附功效,粘附力降低36-75%。
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引用次数: 0
Pyrrole-2-carboxylic acid inhibits biofilm formation and suppresses the virulence of Listeria monocytogenes. 吡咯-2-羧酸抑制生物膜的形成并抑制单核增生李斯特菌的毒力。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 DOI: 10.1080/08927014.2023.2235287
Yuxi Yue, Kai Zhong, Yanping Wu, Hong Gao

Bacterial adhesion and biofilm formation of Listeria monocytogenes on food-contact surfaces result in serious safety concerns. This study aimed to explore the antibiofilm efficacy of pyrrole-2-carboxylic acid (PCA) against L. monocytogenes. Crystal violet staining assay demonstrated that PCA reduced the biofilm biomass of L. monocytogenes. The 2,3-bis-(2-methoxy-4-nitro-5-sulfophenyl)-2H-tetrazolium-5-carboxanilide reduction and flow cytometric assays indicated that PCA attenuated the metabolic activity of L. monocytogenes biofilm together with a decrease in viability. Morphologic observations revealed that PCA exposure collapsed the biofilm architecture. PCA administration of 0.75 mg ml-1 decreased the excretion of extracellular DNA, protein and polysaccharide by 48.58%, 61.60% and 75.63%, respectively. PCA failed to disperse the mature biofilm, even at 1.5 mg ml-1. However, PCA suppressed L. monocytogenes adhesion on common food-contact surfaces. Additionally, PCA exposure suppressed the hemolytic activity of L. monocytogenes. These findings suggested that PCA might serve as an alternative antibiofilm agent to control L. monocytogenes contamination.

单核细胞增生李斯特菌在食品接触表面的粘附和生物膜形成引起了严重的安全问题。本研究旨在探讨吡咯-2-羧酸(PCA)对单核增生乳杆菌的抗菌效果。结晶紫染色表明,PCA降低了单核增生乳杆菌的生物膜生物量。2,3-二-(2-甲氧基-4-硝基-5-巯基)- 2h -四氮唑-5-羧基苯胺还原和流式细胞术分析表明,PCA降低了单核增生乳杆菌生物膜的代谢活性,并降低了生物膜的活力。形态学观察显示PCA暴露使生物膜结构崩溃。0.75 mg ml-1 PCA组细胞外DNA、蛋白质和多糖的排泄量分别减少48.58%、61.60%和75.63%。PCA即使在1.5 mg ml-1的浓度下也不能分散成熟的生物膜。然而,PCA抑制了单核增生乳杆菌在常见食物接触表面的粘附。此外,PCA暴露抑制了单核增生乳杆菌的溶血活性。这些结果提示PCA可以作为一种替代的抗生物膜剂来控制单核增生乳杆菌的污染。
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引用次数: 0
Marine biofouling and the role of biocidal coatings in balancing environmental impacts. 海洋生物污垢和生物杀灭涂层在平衡环境影响中的作用。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 Epub Date: 2023-08-17 DOI: 10.1080/08927014.2023.2246906
Florian Weber, Naser Esmaeili

Marine biofouling is a global problem affecting various industries, particularly the shipping industry due to long-distance voyages across various ecosystems. Therein fouled hulls cause increased fuel consumption, greenhouse gas emissions, and the spread of invasive aquatic species. To counteract these issues, biofouling management plans are employed using manual cleaning protocols and protective coatings. This review provides a comprehensive overview of adhesion strategies of marine organisms, and currently available mitigation methods. Further, recent developments and open challenges of antifouling (AF) and fouling release (FR) coatings are discussed with regards to the future regulatory environment. Finally, an overview of the environmental and economic impact of fouling is provided to point out why and when the use of biocidal solutions is beneficial in the overall perspective.

海洋生物淤积是一个全球性问题,影响着各个行业,尤其是航运业,因为它要穿越各种生态系统进行长途航行。其中被污染的船体会导致燃料消耗增加、温室气体排放和入侵水生物种的传播。为了解决这些问题,采用了生物污垢管理计划,使用手动清洁协议和保护涂层。这篇综述全面概述了海洋生物的粘附策略,以及目前可用的缓解方法。此外,还讨论了防污(AF)和污垢释放(FR)涂料的最新发展和面临的挑战,以应对未来的监管环境。最后,概述了污垢对环境和经济的影响,指出了为什么以及何时使用杀生物剂溶液从整体角度来看是有益的。
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引用次数: 2
Biofouling potential of surface-enhanced Raman scattering-based seawater quality sensors by Ulva spp. Ulva spp.基于表面增强拉曼散射的海水质量传感器的生物污垢潜力。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 Epub Date: 2023-08-18 DOI: 10.1080/08927014.2023.2242283
Kayla R Kurtz, Tania Thalyta Silva de Oliveira, Robert Chevalier, Noura Rayes, Arijit Bose, Jason R Dwyer, Vinka Oyanedel-Craver

This study investigated the biofouling potential of surface-enhanced Raman scattering (SERS)-based sensor materials in the context of marine environments. Uncoated and monolithic commercial gold (Au) silicon nanopillar array SERS substrates, Au-coated carbon black nanoparticle (AuCB NP) substrates, uncoated and Au sputter-coated in-house SERS, and uncoated and Au sputter-coated glass controls were tested for biofouling potential using Ulva spp. as model biofouling organisms. The mean percentages of Ulva spp. zoospores that adhered per mm2 (×103) on the uncoated and coated Au silicon nanopillar array, AuCB NP, uncoated and Au sputter-coated in-house, and uncoated and Au sputter-coated glass substrates were 10.28%, 5.45%, 10.49%, 3.25%, 24.84%, 12.86% and 7.78%, respectively. Results indicated that surface properties such as hydrophobicity, roughness, Au sputter-coating and the presence of micro-refuges on nano- and microstructured substrates were critical to the biofouling formation.

本研究研究了基于表面增强拉曼散射(SERS)的传感器材料在海洋环境中的生物污垢潜力。使用Ulva spp.作为模型生物污垢生物,测试了未涂覆和单片商业金(Au)硅纳米柱阵列SERS基底、涂覆Au的炭黑纳米颗粒(AuCB NP)基底、未涂覆和Au溅射涂覆的内部SERS以及未涂覆和金溅射涂覆的玻璃对照的生物污垢潜力。在未涂覆和涂覆的Au硅纳米柱阵列、AuCB NP、内部未涂覆和Au溅射涂覆以及未涂覆和金溅射涂覆的玻璃基板上,每mm2(×103)附着的Ulva spp.游动孢子的平均百分比分别为10.28%、5.45%、10.49%、3.25%、24.84%、12.86%和7.78%。结果表明,表面性质,如疏水性、粗糙度、Au溅射涂层以及纳米和微结构基底上存在的微避难所,对生物污垢的形成至关重要。
{"title":"Biofouling potential of surface-enhanced Raman scattering-based seawater quality sensors by <i>Ulva</i> spp.","authors":"Kayla R Kurtz,&nbsp;Tania Thalyta Silva de Oliveira,&nbsp;Robert Chevalier,&nbsp;Noura Rayes,&nbsp;Arijit Bose,&nbsp;Jason R Dwyer,&nbsp;Vinka Oyanedel-Craver","doi":"10.1080/08927014.2023.2242283","DOIUrl":"10.1080/08927014.2023.2242283","url":null,"abstract":"<p><p>This study investigated the biofouling potential of surface-enhanced Raman scattering (SERS)-based sensor materials in the context of marine environments. Uncoated and monolithic commercial gold (Au) silicon nanopillar array SERS substrates, Au-coated carbon black nanoparticle (AuCB NP) substrates, uncoated and Au sputter-coated in-house SERS, and uncoated and Au sputter-coated glass controls were tested for biofouling potential using <i>Ulva</i> spp. as model biofouling organisms. The mean percentages of <i>Ulva</i> spp. zoospores that adhered per mm<sup>2</sup> (×10<sup>3</sup>) on the uncoated and coated Au silicon nanopillar array, AuCB NP, uncoated and Au sputter-coated in-house, and uncoated and Au sputter-coated glass substrates were 10.28%, 5.45%, 10.49%, 3.25%, 24.84%, 12.86% and 7.78%, respectively. Results indicated that surface properties such as hydrophobicity, roughness, Au sputter-coating and the presence of micro-refuges on nano- and microstructured substrates were critical to the biofouling formation.</p>","PeriodicalId":8898,"journal":{"name":"Biofouling","volume":"39 6","pages":"629-642"},"PeriodicalIF":2.7,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10531716","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of sphingosine and inoculum concentrations on Staphylococcus aureus and Staphylococcus epidermidis biofilms. 鞘氨醇和接种量对金黄色葡萄球菌和表皮葡萄球菌生物膜的影响。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 DOI: 10.1080/08927014.2023.2236584
Minyoung Kim, Jada S McMahon, Julianna M Nerone, Luciana H Skinner, Guy K German, Cláudia N H Marques

Atopic dermatitis (AD) is a chronic inflammatory skin disease where patients are more susceptible to infection and inflammation. The most salient symptoms of atopic dermatitis (AD) are skin dysbiosis and ceramide deficiency. Here, the effect of AD conditions on S. aureus resilience was investigated. S. aureus and S. epidermidis biofilms were co-inoculated at healthy and AD bacterial ratios and exposed to various sphingosine dosing regimens. In both healthy (S. epidermidis dominant) and AD (S. aureus dominant) conditions the viability of the non-dominant bacterial species was affected. Quorum sensing (QS)-impaired S. aureus was overall more susceptible to sphingosine. Despite the general resilience of QS-intact S. aureus against sphingosine, modulation of S. epidermidis (healthy ratio) and sphingosine (healthy Sph) led to a lack of recovery from its initial killing. Overall, it was found that when in biofilms, S. epidermidis increases S. aureus resilience to sphingosine, possibly enhancing the pathogen's recalcitrance in AD skin.

特应性皮炎(AD)是一种慢性炎症性皮肤病,患者更容易感染和炎症。特应性皮炎(AD)最显著的症状是皮肤生态失调和神经酰胺缺乏。本文研究了AD条件对金黄色葡萄球菌恢复力的影响。金黄色葡萄球菌和表皮葡萄球菌生物膜以健康菌和AD菌的比例共接种,并暴露于不同的鞘氨醇剂量方案。在健康(表皮葡萄球菌优势)和AD(金黄色葡萄球菌优势)条件下,非优势细菌物种的生存能力都受到影响。群体感应(Quorum sensing, QS)受损的金黄色葡萄球菌总体上对鞘氨醇更敏感。尽管qs完整的金黄色葡萄球菌对鞘氨醇具有普遍的恢复力,但表皮葡萄球菌(健康比率)和鞘氨醇(健康Sph)的调节导致其最初被杀后缺乏恢复。总的来说,我们发现表皮葡萄球菌在生物膜中增加了金黄色葡萄球菌对鞘氨醇的抵抗力,可能增强了病原菌对AD皮肤的抵抗力。
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引用次数: 0
Measuring the recruitment and growth of biofouling communities using clear recruitment panels. 使用清晰的招聘小组来衡量生物污染社区的招聘和增长。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 Epub Date: 2023-08-03 DOI: 10.1080/08927014.2023.2243236
Ann Wassick, Kelli Z Hunsucker, Geoffrey Swain

Ecological monitoring has been recognized as a key tool for guiding biofouling management practices. A two-year study was designed to collect comprehensive data on the biofouling community progression at Port Canaveral, Florida, using clear recruitment panels and a scanner to directly observe organisms attached to the surface. This method allowed for minimal disruption to the natural community development and aided the collection of a suite of metrics to explore environmental relationships. Seasonal changes in community composition and biofouling pressure, especially at earlier stages, were related to abiotic conditions. Interannual variation within seasonal communities was also observed. The type of dominant organism present impacted the rate at which surfaces were covered (e.g. fastest cover with tunicates) and the overall biomass accumulation (e.g. highest rate with tubeworms). Results highlight that understanding the influence of the time of year and the dominant organism identity is ecologically vital for improving biofouling management.

生态监测已被公认为指导生物淤积管理实践的关键工具。一项为期两年的研究旨在收集佛罗里达州卡纳维拉尔港生物淤积群落进展的全面数据,使用透明的招募面板和扫描仪直接观察附着在表面的生物。这种方法对自然社区发展的干扰最小,并有助于收集一套指标来探索环境关系。群落组成和生物淤积压力的季节性变化,尤其是在早期阶段,与非生物条件有关。还观察到季节性群落的年际变化。存在的优势生物的类型影响了表面被覆盖的速率(例如被膜覆盖最快)和总生物量积累(例如管虫的最高速率)。研究结果强调,了解一年中的时间和优势生物身份的影响对于改善生物淤积管理在生态学上至关重要。
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引用次数: 0
Analysis of microbial communities of ocular prostheses and anophthalmic sockets using 16S rRNA gene sequencing. 应用16S rRNA基因测序分析义眼和无眼窝的微生物群落。
IF 2.7 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2023-05-01 Epub Date: 2023-07-20 DOI: 10.1080/08927014.2023.2236562
L R Makrakis, V C Oliveira, E S Santos, C Nascimento, E Watanabe, A B Ribeiro, C H Silva-Lovato

Ocular prostheses are liable to host microbial adhesion, which can favor conjunctival inflammation. Knowing the microbiota of the ocular prosthesis and anophthalmic socket is important for predicting infection-related pathogens. This study evaluated the microbiota of the prostheses and anophthalmic sockets of six individuals by 16S rRNA sequencing. The microbial abundance and diversity were analyzed using the Operational Taxonomic Units at the genus level. Forty-seven phyla, capturing 1,258 named genera, were recorded in the sample set. In both sites, the most frequent genera were Fusobacterium, Staphylococcus, Prevotella, and Streptococcus. The microbial abundance was higher for the anophthalmic socket than for the prosthesis. Alpha diversity showed no significant differences in bacterial richness or diversity between sites. Although the microbial abundance in the anophthalmic socket was higher, both sites had similar microbiota with high diversity and low dominance among the genera.

义眼易附着微生物,有利于结膜炎症。了解义眼和无眼窝的微生物群对于预测感染相关病原体很重要。本研究通过16S rRNA测序评估了6名患者的义眼和无眼窝的微生物群。使用属水平的操作分类单位分析微生物的丰度和多样性。样本集中记录了47个门,共有1258个命名属。在这两个地点,最常见的属是梭杆菌属、葡萄球菌属、普雷沃氏菌属和链球菌属。无眼窝的微生物丰度高于假体。阿尔法多样性在不同地点的细菌丰富度或多样性方面没有显著差异。尽管无眼窝中的微生物丰度较高,但两个位点的微生物群相似,属间多样性高,优势度低。
{"title":"Analysis of microbial communities of ocular prostheses and anophthalmic sockets using 16S rRNA gene sequencing.","authors":"L R Makrakis,&nbsp;V C Oliveira,&nbsp;E S Santos,&nbsp;C Nascimento,&nbsp;E Watanabe,&nbsp;A B Ribeiro,&nbsp;C H Silva-Lovato","doi":"10.1080/08927014.2023.2236562","DOIUrl":"10.1080/08927014.2023.2236562","url":null,"abstract":"<p><p>Ocular prostheses are liable to host microbial adhesion, which can favor conjunctival inflammation. Knowing the microbiota of the ocular prosthesis and anophthalmic socket is important for predicting infection-related pathogens. This study evaluated the microbiota of the prostheses and anophthalmic sockets of six individuals by 16S rRNA sequencing. The microbial abundance and diversity were analyzed using the Operational Taxonomic Units at the genus level. Forty-seven phyla, capturing 1,258 named genera, were recorded in the sample set. In both sites, the most frequent genera were <i>Fusobacterium</i>, <i>Staphylococcus</i>, <i>Prevotella</i>, and <i>Streptococcus</i>. The microbial abundance was higher for the anophthalmic socket than for the prosthesis. Alpha diversity showed no significant differences in bacterial richness or diversity between sites. Although the microbial abundance in the anophthalmic socket was higher, both sites had similar microbiota with high diversity and low dominance among the genera.</p>","PeriodicalId":8898,"journal":{"name":"Biofouling","volume":"39 5","pages":"555-564"},"PeriodicalIF":2.7,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10251041","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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