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Production of the Bakırköy strain of sheeppox vaccine virus in spinner flasks using an alternative method with Cytodex 1 microcarriers on Vero cells. 用在Vero细胞上使用Cytodex 1微载体的替代方法在旋转瓶中生产Bakırköy株羊痘疫苗病毒。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-20 DOI: 10.1186/s12896-025-01089-8
Görkem Çolak, Serdar Uzar, Meral Birbir
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引用次数: 0
Unveiling the role of EGR1 and hub senescence-related genes in type II alveolar epithelial cells senescence for obstructive sleep apnea. 揭示EGR1和中枢衰老相关基因在阻塞性睡眠呼吸暂停患者II型肺泡上皮细胞衰老中的作用
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-19 DOI: 10.1186/s12896-025-01067-0
Cai-Li Li, Yu-Xiang Zhang, Xia Yang, Yubao Wang, Hai-Yan Zhao, Jing Feng
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引用次数: 0
Enhancing fruit quality attributes and storability of Ruby Seedless grape cultivar using different irradiated potassium sources as an alternative to ethrel. 不同辐照钾源替代乙烯利提高红宝石无核葡萄果实品质和贮藏性。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-17 DOI: 10.1186/s12896-025-01082-1
Mohamed Farouk Ahmed, Ola Mohamed Fekry, Basma Salah Eldin Ahmed Salama

The current study aims to assess the efficiency of different irradiated potassium sources as alternatives to ethrel in enhancing the fruit quality and storability of Ruby grapevines. This investigation was conducted on seven- year- old Ruby Seedless grape cultivars that were sprayed as follows: control (water); ethrel at 150 ppm; potassium citrate at 2000 and 4000 ppm; irradiated potassium citrate at 750 and 1500 ppm; potassium silicate at 2000 and 4000 ppm and irradiated potassium silicate at 750 and 1500 ppm. The data revealed that all the potassium sprays used significantly increased cluster weight, berry weight, and berry firmness compared with those in the control and ethrel groups. Moreover, the total soluble solids, sugars and anthocyanin contents increased with decreasing acidity% compared with those of the control group. Storability data revealed that all potassium sprays decreased weight loss, decay, firmness loss, and shattering during the storage period compared with those of the control and ethrel groups. Additionally, the total soluble solids, sugars and anthocyanin contents increased with decreasing acidity compared with those of the control. In conclusion, potassium sprays, especially irradiated potassium silicate, can be a good alternative to ethrel for improving the physical and chemical properties of Ruby Seedless grapes and increasing their storability by improving firmness and reducing weight loss, decay, and shattering.

本研究旨在评价不同辐照钾源作为乙烯基的替代品在提高红宝石葡萄果实品质和贮藏性方面的效率。本试验以7年生红宝石无核葡萄品种为试验对象,采用以下喷施方法:对照(水);乙烯利150ppm;2000和4000 ppm的柠檬酸钾;750和1500ppm辐照柠檬酸钾;2000和4000 PPM的硅酸钾和750和1500 PPM的辐照硅酸钾。数据显示,与对照组和乙烯基组相比,所有使用的钾喷雾剂都显著增加了簇重、浆果重和浆果硬度。总可溶性固形物、糖和花青素含量随酸度%的降低而增加。贮藏性数据显示,与对照组和乙烯基组相比,所有喷钾剂在贮藏期间均降低了失重、腐烂、硬度损失和碎裂。总可溶性固形物、糖和花青素含量随酸度的降低而增加。综上所述,喷钾剂,特别是辐照硅酸钾,可以很好地替代乙烯基,改善红宝石无核葡萄的物理和化学性质,并通过改善硬度、减少失重、腐烂和落粒来提高其储存性。
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引用次数: 0
Qualitative parameters and deterioration kinetics of palm oil, shea butter and their blend use for frying cheese. 用于煎炸奶酪的棕榈油、乳木果油及其混合物的定性参数和变质动力学。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-15 DOI: 10.1186/s12896-025-01068-z
Muftaudeen Taoheed Kolawole, Moses Dele Adams, Adio Tayo Ibrahim, Frank Abimbola Ogundolie, Temidayo Emmanuel Olajugbagbe, Gbadamosi Idayat Titilayo
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引用次数: 0
Augmentation of antibacterial activity of ciprofloxacin by bisabololoxide A encapsulated in polymeric nanoparticles against uropathogenic Escherichia coli. 高分子纳米颗粒包封双abololoa增强环丙沙星对尿路致病性大肠杆菌的抑菌活性。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-15 DOI: 10.1186/s12896-025-01070-5
Maryam Bazgosha, Gita Alkan Saberi, Maryam Hormozi, Kimia Shirangi, Fatemeh Shaghaghi Bahri, Hossein Zahmatkesh, Behnam Rasti, Farhod Najafi, Najmeh Ranji, Mohammad Nikpassand, Mahdi Shahriarinour
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引用次数: 0
Sustainable biohydrogen production from banana peels using microbial fermentation. 利用微生物发酵从香蕉皮中可持续生产生物氢。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-13 DOI: 10.1186/s12896-025-01080-3
Mohamed Hemida Abd-Alla, Shymaa Ryhan Bashandy, Wafaa Abdelnaser Sleem, David Mamdouh Khalaf
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引用次数: 0
CLAP-HMM: a biologically constrained deep learning framework for resistance gene prediction in long DNA sequences. CLAP-HMM:一个生物约束的深度学习框架,用于长DNA序列的抗性基因预测。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-12 DOI: 10.1186/s12896-025-01086-x
Liuyan Wang, Yingfan Xu, Xuemei Guan, Shanchun Yan
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引用次数: 0
Determination of the cytotoxic effects of parasporal proteins in native Bacillus thuringiensis isolates on various cancer cell lines and investigation of the apoptotic, synergistic, and angiogenic potency of the isolate Bt 5.4. 苏云金芽孢杆菌原生分离物中副孢蛋白对多种癌细胞的细胞毒作用的测定,以及分离物Bt 5.4的凋亡、协同和血管生成能力的研究。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-11 DOI: 10.1186/s12896-025-01084-z
Müjgan Kesik Oktay, Burcu Şahin, Hatice Güneş
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引用次数: 0
Biosynthesis of silver nanoparticles using Phoma herbarum and evaluation of their fungicidal effects against onion basal root rot disease. 莪术生物合成纳米银及其对洋葱根腐病的杀菌效果评价。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-10 DOI: 10.1186/s12896-025-01085-y
Idris Bektas

This study aims to evaluate the effectiveness of a new alternative biofungicidal product in controlling the fungal disease agent, Fusarium oxysporum f. sp. cepae, which causes considerable losses during onion storage. In the first stage of this study, silver nanoparticles derived from the microorganism (Phoma herbarum) were biosynthesized using the green synthesis method in nanotechnology. Characterisation tests of the nano product, which was synthesized through the biosynthesis process, confirmed that it is a silver-based nano product with size dimensions ranging from 4 to 40 nm. In the second phase of the study, the fungicidal efficacy of the synthesized silver nanoparticle product, at concentrations ranging from 2.5 to 500 ppm, was investigated against pathogenic fungi. Its effectiveness was evaluated under both in vitro and in vivo conditions. In the in vitro study conducted in petri dishes, the highest mycelial growth, 87.66 ± 0.57 mm, was observed in the control group. Following the application of 2.5 and 5 ppm silver nanoparticles, the mycelium diameter measured 86.66 ± 1.15 mm. However, as the concentration of silver nanoparticles increased, a significant reduction in mycelial growth was observed. At 200 ppm, the mycelial diameter decreased to 10.66 ± 1.15 mm; at 500 ppm, no mycelial growth was observed. In the in vivo study conducted on onion bulbs, the fungicidal activity of silver nanoparticles was evaluated by measuring the disease inhibition rates after the application of silver nanoparticles on the bulbs. When disease inhibition rates are compared in onion bulbs, the dose-dependent rot diameters are as follows: positive control(50.20 ± 0.20 mm); 10 ppm (34.60 ± 0.50 mm); 25 ppm (27.60 ± 0.30 mm); 50 ppm (19.00 ± 0.38); 100 ppm (12.00 ± 0.40); 200 ppm (6.80 ± 0.31 mm) and 500 ppm (1.20 ± 0.17 mm). In addition to these results, different concentrations of silver nanoparticles demonstrated a dose-dependent reduction in disease incidence, ranging from 28.89% to 94.42%. When evaluated collectively, the results indicated that silver nanoparticles synthesized through the green synthesis method exhibited varying degrees of fungicidal activity under both in vitro and in vivo conditions, with effectiveness dependent on the concentration applied. Consequently, the synthesized silver nanoparticles product has demonstrated considerable potential as an alternative solution for effectively managing Fusarium oxysporum f. sp. cepae a significant threat to stored onion bulbs.

本研究旨在评价一种新的生物杀菌剂对洋葱贮藏过程中造成严重损失的真菌病剂——尖孢镰刀菌(Fusarium oxysporum f. sp. cepae)的有效性。在本研究的第一阶段,利用纳米技术中的绿色合成方法,从微生物(Phoma herbarum)中提取银纳米颗粒。通过生物合成工艺合成的纳米产品的表征测试证实,它是一种尺寸在4至40纳米之间的银基纳米产品。在研究的第二阶段,研究了合成的银纳米颗粒产品在2.5至500 ppm浓度范围内对致病真菌的杀真菌效果。在体外和体内条件下对其有效性进行了评价。在培养皿中进行的体外研究中,对照组菌丝生长最高,为87.66±0.57 mm。添加2.5 ppm和5 ppm的银纳米粒子后,菌丝直径为86.66±1.15 mm。然而,随着银纳米颗粒浓度的增加,观察到菌丝生长显著减少。在200 ppm时,菌丝直径减小至10.66±1.15 mm;在500ppm时,未观察到菌丝生长。在对洋葱鳞茎进行的体内研究中,通过测定银纳米粒子对洋葱鳞茎的抑菌率来评价银纳米粒子的杀菌活性。当比较洋葱鳞茎的疾病抑制率时,剂量相关的腐烂直径如下:阳性对照(50.20±0.20 mm);10 PPM(34.60±0.50 mm);25ppm(27.60±0.30 mm);50 PPM(19.00±0.38);100 PPM(12.00±0.40);200 ppm(6.80±0.31毫米)和500 ppm(1.20±0.17毫米)。除了这些结果外,不同浓度的银纳米颗粒显示出疾病发病率的剂量依赖性降低,范围从28.89%到94.42%。综合评价结果表明,通过绿色合成方法合成的银纳米颗粒在体外和体内条件下均表现出不同程度的杀真菌活性,其效果取决于施加的浓度。因此,合成的银纳米颗粒产品已经显示出相当大的潜力,作为一种替代解决方案,有效地控制尖孢镰刀菌(一种对储存洋葱鳞茎的重大威胁)。
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引用次数: 0
Biomass and bioethanol production from pretreated mixed fruit peel hydrolysate using Saccharomyces cerevisiae strains at different pH and oxygen conditions. 利用酿酒酵母菌在不同pH和氧条件下预处理混合果皮水解产物生产生物质和生物乙醇。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-09 DOI: 10.1186/s12896-025-01074-1
Anahit Shirvanyan, Ayaulym Daniyarova, Anait Vassilian, Anna Poladyan, Gopalakrishnan Kumar, Duman Orynbekov, Kairat Bekbayev, Karen Trchounian

Background: Fruit peels as a lignocellulosic biomass are rich in sugars and nutrients, thus making them favorable medium for yeast growth and various materials production. This study showed the potential of fuit peels hydrolysate (FPH) as a substrate for single-cell protein (SCP) and bioethanol production, depending on substrate concentration, pH, oxygen availability.

Results: The highest specific growth rate (0.50 ± 0.01 h- 1) was observed at pH 6.5 in non-diluted hydrolysates, which corresponds to ~ 250.0 g L- 1 carbohydrates and 0.2 g L- 1 total nitrogen concentration. The maximal protein production yield (~ 50% by dry weight) was recorded during 24 h cultivation of S. cerevisiae ATCC 13,007 under oxygen-limited conditions at pH 6.5, while the maximal ethanol production (109.00 ± 4.00 g L- 1) was observed at 6 h for S. cerevisiae ATCC 9804 and ATCC 13,007 starins under aerobic conditions. The maximal fermentation efficiency (~ 99%) was observed at 24 h cultivation of S. cerevisiae ATCC 13,007 in 2-fold diluted hydrolysate under oxygen-limited conditions at pH 6.5, while the same strain exhibited the highest carbon conversion efficiency (CCE) (~ 56%) during aerobic cultivation in 2-fold diluted hydrolysate at pH 3.0.

Conclusion: Thus, FPH can serve as a favorable substrate for SCP and bioethanol production using S. cerevisiae strains ATCC 13,007 and ATCC 9804. Nitrogen supplementation and combination with fruit and vegetable processing industries could further enhance SCP production and process efficiency which aligns with circular economic strategy.

背景:果皮作为一种富含糖类和营养物质的木质纤维素生物质,是酵母生长和各种物质生产的良好培养基。该研究表明,果皮水解物(FPH)作为单细胞蛋白(SCP)和生物乙醇生产的底物的潜力,取决于底物浓度、pH值和氧可用性。结果:未稀释的水解产物在pH 6.5时的比生长率最高(0.50±0.01 h- 1),对应于~ 250.0 g L- 1碳水化合物和0.2 g L- 1总氮浓度。在pH 6.5的限氧条件下,酿酒葡萄球菌ATCC 13007在培养24 h时的最大蛋白质产量为干重的50%,而在有氧条件下,酿酒葡萄球菌ATCC 9804和ATCC 13007在培养6 h时的最大乙醇产量为109.00±4.00 g L- 1。酿酒酵母ATCC 13007在限氧条件下,pH为6.5稀释2倍的水解液中培养24 h,发酵效率最高(~ 99%),而在pH为3.0稀释2倍的水解液中培养24 h,碳转化效率最高(~ 56%)。结论:FPH可作为酿酒葡萄球菌ATCC 13007和ATCC 9804产SCP和生物乙醇的良好底物。氮的补充和与果蔬加工业的结合可以进一步提高SCP的生产和加工效率,符合循环经济战略。
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