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Biosynthesis of silver nanoparticles using Phoma herbarum and evaluation of their fungicidal effects against onion basal root rot disease. 莪术生物合成纳米银及其对洋葱根腐病的杀菌效果评价。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-10 DOI: 10.1186/s12896-025-01085-y
Idris Bektas

This study aims to evaluate the effectiveness of a new alternative biofungicidal product in controlling the fungal disease agent, Fusarium oxysporum f. sp. cepae, which causes considerable losses during onion storage. In the first stage of this study, silver nanoparticles derived from the microorganism (Phoma herbarum) were biosynthesized using the green synthesis method in nanotechnology. Characterisation tests of the nano product, which was synthesized through the biosynthesis process, confirmed that it is a silver-based nano product with size dimensions ranging from 4 to 40 nm. In the second phase of the study, the fungicidal efficacy of the synthesized silver nanoparticle product, at concentrations ranging from 2.5 to 500 ppm, was investigated against pathogenic fungi. Its effectiveness was evaluated under both in vitro and in vivo conditions. In the in vitro study conducted in petri dishes, the highest mycelial growth, 87.66 ± 0.57 mm, was observed in the control group. Following the application of 2.5 and 5 ppm silver nanoparticles, the mycelium diameter measured 86.66 ± 1.15 mm. However, as the concentration of silver nanoparticles increased, a significant reduction in mycelial growth was observed. At 200 ppm, the mycelial diameter decreased to 10.66 ± 1.15 mm; at 500 ppm, no mycelial growth was observed. In the in vivo study conducted on onion bulbs, the fungicidal activity of silver nanoparticles was evaluated by measuring the disease inhibition rates after the application of silver nanoparticles on the bulbs. When disease inhibition rates are compared in onion bulbs, the dose-dependent rot diameters are as follows: positive control(50.20 ± 0.20 mm); 10 ppm (34.60 ± 0.50 mm); 25 ppm (27.60 ± 0.30 mm); 50 ppm (19.00 ± 0.38); 100 ppm (12.00 ± 0.40); 200 ppm (6.80 ± 0.31 mm) and 500 ppm (1.20 ± 0.17 mm). In addition to these results, different concentrations of silver nanoparticles demonstrated a dose-dependent reduction in disease incidence, ranging from 28.89% to 94.42%. When evaluated collectively, the results indicated that silver nanoparticles synthesized through the green synthesis method exhibited varying degrees of fungicidal activity under both in vitro and in vivo conditions, with effectiveness dependent on the concentration applied. Consequently, the synthesized silver nanoparticles product has demonstrated considerable potential as an alternative solution for effectively managing Fusarium oxysporum f. sp. cepae a significant threat to stored onion bulbs.

本研究旨在评价一种新的生物杀菌剂对洋葱贮藏过程中造成严重损失的真菌病剂——尖孢镰刀菌(Fusarium oxysporum f. sp. cepae)的有效性。在本研究的第一阶段,利用纳米技术中的绿色合成方法,从微生物(Phoma herbarum)中提取银纳米颗粒。通过生物合成工艺合成的纳米产品的表征测试证实,它是一种尺寸在4至40纳米之间的银基纳米产品。在研究的第二阶段,研究了合成的银纳米颗粒产品在2.5至500 ppm浓度范围内对致病真菌的杀真菌效果。在体外和体内条件下对其有效性进行了评价。在培养皿中进行的体外研究中,对照组菌丝生长最高,为87.66±0.57 mm。添加2.5 ppm和5 ppm的银纳米粒子后,菌丝直径为86.66±1.15 mm。然而,随着银纳米颗粒浓度的增加,观察到菌丝生长显著减少。在200 ppm时,菌丝直径减小至10.66±1.15 mm;在500ppm时,未观察到菌丝生长。在对洋葱鳞茎进行的体内研究中,通过测定银纳米粒子对洋葱鳞茎的抑菌率来评价银纳米粒子的杀菌活性。当比较洋葱鳞茎的疾病抑制率时,剂量相关的腐烂直径如下:阳性对照(50.20±0.20 mm);10 PPM(34.60±0.50 mm);25ppm(27.60±0.30 mm);50 PPM(19.00±0.38);100 PPM(12.00±0.40);200 ppm(6.80±0.31毫米)和500 ppm(1.20±0.17毫米)。除了这些结果外,不同浓度的银纳米颗粒显示出疾病发病率的剂量依赖性降低,范围从28.89%到94.42%。综合评价结果表明,通过绿色合成方法合成的银纳米颗粒在体外和体内条件下均表现出不同程度的杀真菌活性,其效果取决于施加的浓度。因此,合成的银纳米颗粒产品已经显示出相当大的潜力,作为一种替代解决方案,有效地控制尖孢镰刀菌(一种对储存洋葱鳞茎的重大威胁)。
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引用次数: 0
Biomass and bioethanol production from pretreated mixed fruit peel hydrolysate using Saccharomyces cerevisiae strains at different pH and oxygen conditions. 利用酿酒酵母菌在不同pH和氧条件下预处理混合果皮水解产物生产生物质和生物乙醇。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-09 DOI: 10.1186/s12896-025-01074-1
Anahit Shirvanyan, Ayaulym Daniyarova, Anait Vassilian, Anna Poladyan, Gopalakrishnan Kumar, Duman Orynbekov, Kairat Bekbayev, Karen Trchounian

Background: Fruit peels as a lignocellulosic biomass are rich in sugars and nutrients, thus making them favorable medium for yeast growth and various materials production. This study showed the potential of fuit peels hydrolysate (FPH) as a substrate for single-cell protein (SCP) and bioethanol production, depending on substrate concentration, pH, oxygen availability.

Results: The highest specific growth rate (0.50 ± 0.01 h- 1) was observed at pH 6.5 in non-diluted hydrolysates, which corresponds to ~ 250.0 g L- 1 carbohydrates and 0.2 g L- 1 total nitrogen concentration. The maximal protein production yield (~ 50% by dry weight) was recorded during 24 h cultivation of S. cerevisiae ATCC 13,007 under oxygen-limited conditions at pH 6.5, while the maximal ethanol production (109.00 ± 4.00 g L- 1) was observed at 6 h for S. cerevisiae ATCC 9804 and ATCC 13,007 starins under aerobic conditions. The maximal fermentation efficiency (~ 99%) was observed at 24 h cultivation of S. cerevisiae ATCC 13,007 in 2-fold diluted hydrolysate under oxygen-limited conditions at pH 6.5, while the same strain exhibited the highest carbon conversion efficiency (CCE) (~ 56%) during aerobic cultivation in 2-fold diluted hydrolysate at pH 3.0.

Conclusion: Thus, FPH can serve as a favorable substrate for SCP and bioethanol production using S. cerevisiae strains ATCC 13,007 and ATCC 9804. Nitrogen supplementation and combination with fruit and vegetable processing industries could further enhance SCP production and process efficiency which aligns with circular economic strategy.

背景:果皮作为一种富含糖类和营养物质的木质纤维素生物质,是酵母生长和各种物质生产的良好培养基。该研究表明,果皮水解物(FPH)作为单细胞蛋白(SCP)和生物乙醇生产的底物的潜力,取决于底物浓度、pH值和氧可用性。结果:未稀释的水解产物在pH 6.5时的比生长率最高(0.50±0.01 h- 1),对应于~ 250.0 g L- 1碳水化合物和0.2 g L- 1总氮浓度。在pH 6.5的限氧条件下,酿酒葡萄球菌ATCC 13007在培养24 h时的最大蛋白质产量为干重的50%,而在有氧条件下,酿酒葡萄球菌ATCC 9804和ATCC 13007在培养6 h时的最大乙醇产量为109.00±4.00 g L- 1。酿酒酵母ATCC 13007在限氧条件下,pH为6.5稀释2倍的水解液中培养24 h,发酵效率最高(~ 99%),而在pH为3.0稀释2倍的水解液中培养24 h,碳转化效率最高(~ 56%)。结论:FPH可作为酿酒葡萄球菌ATCC 13007和ATCC 9804产SCP和生物乙醇的良好底物。氮的补充和与果蔬加工业的结合可以进一步提高SCP的生产和加工效率,符合循环经济战略。
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引用次数: 0
Seasonal variations in microbial and physicochemical parameters of Nile river water in Giza, Egypt: comparison of IDEXX and conventional methods. 埃及吉萨尼罗河水微生物和理化参数的季节变化:IDEXX与传统方法的比较
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-08 DOI: 10.1186/s12896-025-01076-z
Ahmed S Saied, Adel A Mousa, Abdullah M Abdo
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引用次数: 0
Effects of optogenetic stimulation on neural gene expression in human bone marrow and adipose-derived mesenchymal stem cells. 光遗传刺激对人骨髓和脂肪源间充质干细胞神经基因表达的影响。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-08 DOI: 10.1186/s12896-025-01083-0
Mohammad Amin Fereidounian, Shahriyar Bourbour, Afshan Shirkavand, Hoda Keshmiri Neghab, Mahdi Saberi Pirouz, Ezeddin Mohajerani, Shirin Farivar
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引用次数: 0
Overexpression of NtGSTU10 gene enhances nicotine content in hybrids by promoting the synthesis and transport metabolism of nicotine. NtGSTU10基因的过表达通过促进烟碱的合成和转运代谢来提高烟碱含量。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-08 DOI: 10.1186/s12896-025-01063-4
Zejun Mo, Ying Huang, Kai Pi, Lili Duan, Min Xie, Benshan Long, Renxiang Liu

Background: Nicotine exhibits positive heterosis, and through its utilization, new tobacco varieties with ideal nicotine content have been bred. However, the potential mechanism underlying the increased transport and nicotine accumulation capacity in hybrids remain poorly understood.

Results: The purpose of this study was to reveal the regulatory role of the key gene NtGSTU10, which was identified during the early stages of nicotine heterosis. NtGSTU10-over expression lines were created through genetic transformation, and the nicotinic content, transport coefficient, and heterosis of NtGSTU10-over expression lines and wild-type tobacco plants were compared. The results suggested that the nicotine content in the leaves of V×OB7 (The over expression hybrids were produced by crossing Va116 as the female parent with OB7 as the male parent.) and V×OB12 (The over expression hybrids were produced by crossing Va116 as the female parent with OB12 as the male parent.) was significantly higher than that of the wild-type hybrid (V×B). Compared to the V×B, the nicotine transport coefficients of V×OB7 and V×OB12 were significantly increased by 39.50% and 40.67%, respectively; and nicotine heterosis was significantly increased by 120.07% and 127.59%, respectively. Further analysis showed that overexpression of the NtGSTU10 gene could result in up-regulated expression of genes related to nicotine synthesis (AOC, QS, ODC, and PAO) and transport (ABCB1, ABCC1, and ABCC2), as well as down-regulation of negative regulatory factors (ERF1, ETR, and JAZ).

Conclusions: The results indicated that overexpression of the NtGSTU10 gene promotes the synthesis and transport metabolism of nicotine in tobacco, positively contributing to increased nicotine content in hybrids. The research findings provide a molecular basis for regulating the nicotine transport and accumulation in hybrids, and also provide genetic resources for the targeted cultivation of new tobacco varieties with suitable nicotine content.

背景:烟碱具有正杂种优势,通过对烟碱的利用,培育出烟碱含量理想的烟草新品种。然而,杂种烟草转运和尼古丁积累能力增加的潜在机制仍不清楚。结果:本研究旨在揭示尼古丁杂种优势早期鉴定的关键基因NtGSTU10的调控作用。通过遗传转化建立NtGSTU10-over表达系,比较NtGSTU10-over表达系与野生型烟草的烟碱含量、转运系数和杂种优势。结果表明,V×OB7(以Va116为母本,OB7为父本杂交得到的过表达杂种)和V×OB12(以Va116为母本,OB12为父本杂交得到的过表达杂种)叶片中尼古丁含量显著高于野生型杂种V×B。与V×B相比,V×OB7和V×OB12的尼古丁转运系数分别显著提高了39.50%和40.67%;烟碱杂种优势分别提高了120.07%和127.59%。进一步分析发现,过表达NtGSTU10基因可导致尼古丁合成相关基因(AOC、QS、ODC、PAO)和转运相关基因(ABCB1、ABCC1、ABCC2)表达上调,负调控因子(ERF1、ETR、JAZ)表达下调。结论:NtGSTU10基因的过表达促进烟叶中尼古丁的合成和转运代谢,对烟叶中尼古丁含量的增加有积极的促进作用。研究结果为烟碱转运积累调控提供了分子基础,也为有针对性地培育烟碱含量适宜的烟草新品种提供了遗传资源。
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引用次数: 0
Antibacterial and antibiofilm activity of platelet-rich plasma under different activation conditions against multidrug-resistant MRSA isolated from human skin abscesses. 富血小板血浆在不同活化条件下对人皮肤脓肿多药耐药MRSA的抗菌和抗生物膜活性研究
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-08 DOI: 10.1186/s12896-025-01078-x
Asmaa Sayed Abdelgeliel, Waiel F Sayed, Wesam M Salem, Fatma S Hassan
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引用次数: 0
Design, optimization of Niosomal gel capability for solubility and bioavailability enhancement of Kynurenic acid after intranasal administration: In Vitro and In Vivo Evaluation. 设计,优化乳质体凝胶能力,以提高犬尿酸在鼻内的溶解度和生物利用度:体外和体内评估。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-05 DOI: 10.1186/s12896-025-01069-y
Ananda Kumar Chettupalli, Sarad Pawar Naik Bukke, Shaik Abdul Rahaman, Mounika Bodige, Vijaya Kishore Kanakaraju, Marati Kavitha, Darla Srinivasarao, Achor Mohammed, Narayana Goruntla, Tadele Mekuriya Yadesa
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引用次数: 0
Green biosynthesis and antimicrobial activity of silver nanoparticles synthesized by Lactobacillus acidophilus against multidrug-resistant Klebsiella pneumoniae. 嗜酸乳杆菌合成的银纳米颗粒对多重耐药肺炎克雷伯菌的绿色生物合成及抗菌活性研究。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-03 DOI: 10.1186/s12896-025-01018-9
Mahsa Maqsoodi, Elahe Tajbakhsh, Hassan Momtaz
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引用次数: 0
Metagenomic laccase-catalyzed crosslinking of wheat proteins for enhanced soybean meal nutritional value: applications in poultry feed and food industry. 宏基因组漆酶催化小麦蛋白交联提高豆粕营养价值:在家禽饲料和食品工业中的应用。
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-02 DOI: 10.1186/s12896-025-01081-2
Tina Rouzban, Razieh Goudarzi, Elaheh Motamedi, Marzieh Ghollasi, Mehrshad Zeinalabedini, Shohreh Ariaeenejad
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引用次数: 0
Staphylococcus epidermidis MB614 and Staphylococcus hominis MB621 from human milk as up regulators of TNF-α induced IL-8 production by Caco-2 cell line. 人乳表皮葡萄球菌MB614和人型葡萄球菌MB621对TNF-α诱导Caco-2细胞系产生IL-8的调节作用
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-12-01 DOI: 10.1186/s12896-025-01079-w
Ayesha Saeed, Azra Yasmin, Muhamad Arslan Ahmed, Shomaila Zaib, Muhammad Tabish, Bushra Rehman
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引用次数: 0
期刊
BMC Biotechnology
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