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Species and Intraspecies Level Diversity of Beauveria in Boreal Forests of Northwestern Russia 俄罗斯西北部北方森林中牛维氏菌的物种和种内多样性
Pub Date : 2023-12-23 DOI: 10.1134/s207908642307006x
I. A. Kazartsev, G. R. Lednev, M. V. Levchenko

Abstract—The diversity of entomopathogenic fungi, including, inter alia, members of the genus Beauveria, has been assessed insufficiently in Northwestern Russia. With respect to the contemporary taxonomical changes based on molecular markers, the available data are poor and need to be improved. We have established the species and intraspecies diversity of sixty Beauveria spp. isolates obtained from dead insects collected in Leningrad (2017), Novgorod (2018), Vologda (2018), and Pskov (2013, 2018) oblasts and in the Republic of Karelia (2017). Most fungi were isolated from beetles of the subfamily Scolytinae. Beauveria pseudobassiana was the predominant species in the studied subset (with an occurrence of 75.0%). B. bassiana (13.3%) and B. caledonica (11.7%) were isolated in smaller quantities. The latter species was considered rare for Russia; only one finding has been registered up to this time. Molecular analysis of the Bloc and tef1α loci allowed the designation of a new broad clade within B. pseudobassiana, comprised of haplotypes that had not been published in the nucleotide sequence databases previously. All other clades of the found species have a broad geographical distribution.

摘要--俄罗斯西北部昆虫病原真菌的多样性,尤其包括蒲公英属真菌的多样性,尚未得到充分评估。关于基于分子标记的当代分类学变化,现有数据贫乏,需要改进。我们确定了从列宁格勒州(2017 年)、诺夫哥罗德州(2018 年)、沃洛格达州(2018 年)和普斯科夫州(2013 年,2018 年)以及卡累利阿共和国(2017 年)收集的昆虫尸体中分离出的 60 株 Beauveria 属真菌的物种和种内多样性。大多数真菌都是从甲虫亚科的甲虫身上分离出来的。Beauveria pseudobassiana 是研究子集中的主要物种(出现率为 75.0%)。B. bassiana(13.3%)和 B. caledonica(11.7%)的分离数量较少。后者在俄罗斯被认为是罕见的;到目前为止仅有一次发现。通过对 Bloc 和 tef1α 基因座的分子分析,在 B. pseudobassiana 中发现了一个新的大支系,由以前未在核苷酸序列数据库中公布的单倍型组成。所发现物种的所有其他支系都有广泛的地理分布。
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引用次数: 0
Detection of Colletotrichum coccodes by Real-Time PCR 通过实时 PCR 检测球孢子菌
Pub Date : 2023-12-01 DOI: 10.1134/s2079086423070101

Abstract

Colletotrichum coccodes causes dangerous potato and tomato diseases, known as anthracnose and black spot. Morphologically, they are often difficult to distinguish from diseases caused by other microorganisms. On green tomato fruits, the disease may be asymptomatic; it appears only on ripe red fruits. For quick and accurate diagnosis and identification of the pathogen, a test system for real-time PCR is proposed. To develop a test system, the nucleotide sequence of the glycerol-3-phosphate dehydrogenase gene was determined in 45 different strains of C. coccodes. Based on the results obtained and analysis of similar sequences of other species available in the GenBank Database, C. coccodes species-specific primers and a probe were designed. To test the specificity of the created test system, PCR was done with DNA isolated from pure cultures of 15 different species of parasitic and saprotrophic fungi associated with tomato and potato plants (Fusarium oxysporum, Fusarium verticillium, Phomopsis phaseoli, Alternaria alternatа, Helminthosporium solani, Colletotrichum coccodes, Phellinus ferrugineovelutinus, Stemphylium vesicarium, Helminthosporium solani, Phomopsis phaseoli, Neonectria radicicola, Rhizoctonia solani, Penicillium sp., Cladosporium fulvum, and Cladosporium cladosporioides). The presence of Colletotrichum coccodes DNA was determined at a 20‒27 threshold cycle. The remaining types of fungi were determined after 40 cycles or were not detected at all. The test system makes it possible to confidently detect in the analyzed PCR-mixture concentrations of C. coccodes exceeding 0.01 ng/mm3. The test system was used to study the presence of C. coccodes in tomato leaves with symptoms of fungal diseases and potato tubers without external symptoms of disease. Leaves with fungal lesion symptoms were collected from two different fields in Krasnodar krai; tubers, from the fields in Kostroma, Moscow, Kaluga, and Nizhny Novgorod oblasts. A single tomato leaf containing C. coccodes DNA was found, while the presence of C. coccodes DNA tubers grown in Kostroma, Moscow, and Kaluga oblasts was detected in five samples.

摘要 Colletotrichum coccodes 可引起危险的马铃薯和番茄病害,即炭疽病和黑斑病。从形态上看,它们通常很难与其他微生物引起的病害区分开来。在绿色番茄果实上,这种病可能没有症状;只有在成熟的红色果实上才会出现。为了快速准确地诊断和鉴定病原体,建议采用实时 PCR 检测系统。为了开发测试系统,测定了 45 株不同的球孢菌甘油-3-磷酸脱氢酶基因的核苷酸序列。根据所获得的结果以及对 GenBank 数据库中其他物种类似序列的分析,设计了球尾蛛物种特异性引物和探针。为了检验所创建的检测系统的特异性,我们用从与番茄和马铃薯植物相关的 15 种不同寄生真菌和噬菌真菌(Fusarium oxysporum、Fusarium verticillium、Phomopsis phaseoli、Alternaria)的纯培养物中分离的 DNA 进行了 PCR 检测、与番茄和马铃薯植物有关的 15 种不同寄生真菌和吸附性真菌(镰刀菌、轮枝镰刀菌、拟褐 鳞孢霉、交替孢霉、茄黑星菌、球孢霉、铁锈黄壳菌、葡萄孢、茄黑星菌、拟褐 鳞孢霉、根瘤蚜、根霉、青霉菌属)的纯培养物分离的 DNA 进行了检测。,(Cladosporium fulvum 和 Cladosporium cladosporioides)。Colletotrichum coccodes DNA 的存在是在 20-27 个阈值周期内确定的。其余类型的真菌在 40 个周期后才能确定,或者根本检测不到。该测试系统可以在分析的 PCR 混合物中检测到浓度超过 0.01 纳克/立方毫米的球孢子菌。该检测系统用于研究有真菌病害症状的番茄叶片和无外部病害症状的马铃薯块茎中是否存在球孢子虫。有真菌病害症状的叶片采集自克拉斯诺达尔边疆区的两块不同的田地;块茎采集自科斯特罗马州、莫斯科州、卡卢加州和下诺夫哥罗德州的田地。发现一片番茄叶片含有球孢菌 DNA,而在科斯特罗马州、莫斯科州和卡卢加州种植的块茎中有五个样本检测到球孢菌 DNA。
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引用次数: 0
Effect of Metabolic Inhibitors on the Size and Structure of Halos Induced by the Powdery Mildew Pathogen Blumeria graminis f. sp. tritici on Wheat Leaves 代谢抑制剂对小麦叶片上白粉病病原体 Blumeria graminis f. sp. tritici 诱导的晕的大小和结构的影响
Pub Date : 2023-12-01 DOI: 10.1134/S2079086423070022
A. Babosha, T. V. Avetisyan
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引用次数: 0
Race Composition of the Novosibirsk Population of Puccinia graminis f. sp. tritici 新西伯利亚禾谷粉虱种群的种族组成
Pub Date : 2023-12-01 DOI: 10.1134/S2079086423070125
E. Skolotneva, V. Kelbin, A. Morgunov, N. I. Boiko, V. Shamanin, E. A. Salina
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引用次数: 0
Order Cantharellales: Taxonomic and Ecological Diversification Cantharellales 目:分类和生态多样性
Pub Date : 2023-12-01 DOI: 10.1134/s2079086423070046

Abstract

The review is devoted to the taxonomic representation of the order Cantharellales in connection with problems of taxonomical history of the group and problems of its ecological diversification. The history of the taxonomy of Cantharellales is considered, and it is shown that at present the order is limited to no more than 550 species from 31 genera and 5 families: Aphelariaceae (Aphelaria, Phaeoaphelaria, Tumidapexus); Botryobasidiaceae (Botryobasidium with anamorphs, Suillosporium); Ceratobasidiaceae (Ceratoporia, Ceratobasidium pr.p., Rhizoctonia); Hydnaceae (Bergerella, Bryoclavula, Bulbilla, Burgella, Burgellopsis, Burgoa, Cantharellus, Clavulina, Craterellus, Gloeomucro, Hydnum, Ingoldiella, Membranomyces, Minimedusa, Multiclavula, Neoburgoa, Parastereopsis, Repetobasidiellum, Rogersiomyces, Sistotrema, Sistotremella); and Tulasnellaceae (Pseudotulasnella, Stilbotulasnella, Tulasnella). The unresolved problems of the Cantharellales taxonomy are discussed. The ecomorphological and ecological-trophic diversification of the order is consi-dered. A synopsis of families and genera is given with identification keys and detailed original taxa diagnoses down to the generic level. It is concluded that, during the evolution of the order Cantharellales and other large groups of Agaricomycetes, there is a parallelism associated with the development by fungi of similar adaptive zones that opened up in connection with the Early Cretaceous diversification of the terrestrial biota: the co-lonization of wood debris with the formation of hypochnoid, corticioid, and secondary resupinate forms; fo-rest litter with the formation of clavarioid and ramarioid forms; the development of sporulation within grasses with a reduction of cantharelloid and secondary formation of clavarioid forms; the formation of ectomycorrhizae and orchid mycorrhiza by lignotrophic fungi; and colonization of moss protonemata, films of aerophytic algae, and lichen thalli.

摘要 本综述结合坎塔雷尔目分类学历史问题及其生态多样化问题,专门论述了坎塔雷尔目在分类学上的代表性。文章回顾了坎塔雷尔目分类学的历史,并指出目前坎塔雷尔目只有 5 科 31 属不超过 550 个物种:Aphelariaceae(Aphelaria,Phaeoaphelaria,Tumidapexus);Botryobasidiaceae(Botryobasidium with anamorphs,Suillosporium);Ceratobasidiaceae(Ceratoporia,Ceratobasidium pr.p、Rhizoctonia);水螅科(Bergerella、Bryoclavula、Bulbilla、Burgella、Burgellopsis、Burgoa、Cantharellus、Clavulina、Craterellus、Gloeomucro、Hydnum、Ingoldiella、Membranomyces、Minimedusa、Multiclavula、Neoburgoa、Parastereopsis、Repetobasidiellum、Rogersiomyces、Sistotrema、Sistotremella);以及土拉菌科(Pseudotulasnella、Stilbotulasnella、Tulasnella)。讨论了 Cantharellales 分类学中尚未解决的问题。对该目在形态学和生态营养学上的多样化进行了梳理。给出了科和属的概述,并附有识别钥匙和详细的原始分类群诊断,直至属级。结论是,在姬松茸目和其他大型姬松茸类群的进化过程中,与真菌在早白垩世陆地生物群多样化过程中开辟的类似适应区的发展有平行关系:木屑的共同隆起,形成了下瘤胃、皮质瘤胃和次生瘤胃;枯枝落叶的共同隆起,形成了克拉瓦里奥瘤胃和拉马里奥瘤胃;禾本科植物内孢子的发展,形成了茎状孢子和次生茎状孢子;木质营养真菌形成了外生菌根和兰花菌根;苔藓原生质、气生藻膜和地衣苔藓的定殖。
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引用次数: 0
Biodiversity of Colletotrichum spp. on Several Wild and Cultivated Plants 几种野生和栽培植物上 Colletotrichum 菌属的生物多样性
Pub Date : 2023-12-01 DOI: 10.1134/s2079086423070071

Abstract—The genus Colletotrichum includes a number of plant pathogens of major importance, causing diseases in a broad variety of woody and herbaceous plants. Due to recent molecular analysis, Colletotrichum spp. have undergone many taxonomic changes, i.e., introduction of a significant number of new species and abolition of some old ones. The data on the species diversity, abundance and host specialization of species in this genus on the territory of Russia and neighboring countries are obviously far from being complete, do not correspond to the modern taxonomy of the genus and require substantial revision. In this work, the molecular genetic identification and pathogenicity assessment of 35 isolates, previously identified as Colletotrichum spp., from the European part of Russia, Ukraine, Siberia, and the Russian Far East were carried out. It has been found that 12 isolates obtained from wild plants and crops belong to the species Colletotrichum coccodes. The remaining isolates belong to destructivum (14 isolates) and dematium (9 isolates) species complexes. Among the members of the destructivum complex, it was possible to identify the species C. destructivum and C. lini. C. dematium, C. lineola and Colletotrichum cf. spinaciae were defined among the isolates of the dematium complex. Three isolates of C. destructivum from wild plants of Leningrad oblast and Kamchatka, to our knowledge, are the first findings of this species for Russia. According to the results of the pathogenicity assessment, three isolates assigned to the destructivum species complex may be of interest for the biocontrol of Galinsoga parviflora, and one isolate identified as С. coccodes may be potentially used for the control of Ambrosia artemisiifolia.

摘要:Colletotrichum 属包括许多重要的植物病原体,可引起多种木本和草本植物的病害。由于最近的分子分析,Colletotrichum 属经历了许多分类上的变化,即引入了大量新种,废除了一些旧种。有关该属物种在俄罗斯及其邻国境内的多样性、丰度和寄主专一性的数据显然远不够完整,与该属的现代分类法不符,需要进行大量修订。在这项工作中,对之前从俄罗斯欧洲地区、乌克兰、西伯利亚和俄罗斯远东地区鉴定为 Colletotrichum spp.的 35 个分离株进行了分子遗传鉴定和致病性评估。结果发现,从野生植物和农作物中获得的 12 个分离株属于 Colletotrichum coccodes 菌种。其余的分离物属于 destructivum(14 个分离物)和 dematium(9 个分离物)种群。在 destructivum 复合体成员中,可以鉴定出 C. destructivum 和 C. lini。在dematium复合体的分离物中,确定了C. dematium、C. lineola和Colletotrichum cf. spinaciae。据我们所知,从列宁格勒州和堪察加半岛的野生植物中分离出的三株破坏疫霉(C. destructivum)是俄罗斯首次发现该物种。根据致病性评估结果,属于 destructivum 物种复合体的三个分离物可能对 Galinsoga parviflora 的生物防治有意义,一个被鉴定为 С. coccodes 的分离物可能用于防治 Ambrosia artemisiifolia。
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引用次数: 0
Dynamics of Virulence of Commensals: Preventive Phenotypical Mutability 共生菌毒力动力学:预防性表型突变
Pub Date : 2023-11-28 DOI: 10.1134/s207908642306004x
S. V. Chepur, N. N. Pluzhnikov, S. A. Saiganov, O. V. Chubar, L. S. Bakulina, I. V. Litvinenko

Abstract

The peculiarities of the influence of cytokines and metabolites of the systemic inflammatory reaction and stress-implementing and nutritional factors contributing to the transformation of the phenotype of the resident intestinal microflora with an increase in its virulence are described. From the perspective of expression of genes and conformations of proteins and phospholipids, the influence of temperature as a signaling factor in increasing the virulence of the intestinal microbiome is considered. Evolutionarily formed mechanisms of expression of the maximum pathogenic phenotype of microorganisms and, thus, achieving an increase in their biomass and maximum dissemination through the microorganism compartments increase the probability of the transmission of commensals to another biotope, i.e., increases the probability of their survival after the death of the host organism. To prevent bacterial translocation after the relief of critical conditions, early enteral administration of β-glucans in food mixtures, iron excretion, and relief of inorganic phosphate deficiency, including by induction of alkaline phosphatase synthesis, are substantiated.

摘要:本文描述了细胞因子和代谢产物对全身炎症反应和应激的影响,以及营养因子对常驻肠道菌群表型转化和毒力增加的影响。从基因表达、蛋白质和磷脂构象的角度考虑温度作为信号因子对肠道微生物群毒力增强的影响。进化形成的微生物最大致病表型的表达机制,从而实现其生物量的增加和通过微生物室的最大传播,增加了共生生物向另一个生物群落传播的可能性,即增加了它们在宿主生物死亡后存活的可能性。为了防止危重症状缓解后的细菌易位,研究证实了在食物混合物中早期肠内给药β-葡聚糖、铁排泄和无机磷酸盐缺乏的缓解,包括通过诱导碱性磷酸酶合成。
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引用次数: 0
The Emergence and Preventability of Globally Spreading Antibiotic Resistance: A Literature Review 全球蔓延的抗生素耐药性的出现和预防:文献综述
Pub Date : 2023-11-28 DOI: 10.1134/s2079086423060154
Osman Türkyılmaz, Cihan Darcan

Abstract

Antibiotics have been used in clinical treatment since the mid-20th century. With the use of antibiotics, infant mortality has decreased and average life has increased by about 20 years. However, since the early years of antibiotic use, bacteria have begun to change to reduce or eliminate the effectiveness of antibiotics. Antibiotic resistance is spreading rapidly, but the mechanisms of resistance acquisition, how resistance arises, and how it can be prevented are not clearly understood. The purpose of this review is to compile information on studies of antibiotic resistance and the prevention of resistance acquisition. Spontaneous mutations are an important cause of resistance acquisition in the presence of antibiotics. One of the most commonly used methods to study how these mutations arise is adaptive resistance experiments. Using the information obtained from these experiments, it has been determined that the SOS response plays an important role in the acquisition of resistance mutations. Therefore, the SOS response could be an important target for inhibiting the acquisition of antibiotic resistance.

摘要抗生素自20世纪中期开始用于临床治疗。随着抗生素的使用,婴儿死亡率下降,平均寿命增加了约20年。然而,自从早期使用抗生素以来,细菌已经开始发生变化,以降低或消除抗生素的有效性。抗生素耐药性正在迅速蔓延,但耐药性获得的机制、耐药性如何产生以及如何预防尚不清楚。本综述的目的是汇编有关抗生素耐药和耐药获得预防的研究资料。在抗生素存在的情况下,自发突变是获得耐药性的一个重要原因。研究这些突变如何产生的最常用的方法之一是适应性抗性实验。利用这些实验获得的信息,已经确定SOS反应在抗性突变的获得中起着重要作用。因此,SOS反应可能是抑制抗生素耐药性获得的重要靶点。
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引用次数: 0
Soil Enzyme Activity in Natural and Plowed Catenas as Parameters of Physiological State of Microbial Communities 天然和耕地土壤酶活性作为微生物群落生理状态的参数
Pub Date : 2023-11-28 DOI: 10.1134/s2079086423060063
E. V. Chernysheva, K. S. Dushchanova, T. E. Khomutova, A. V. Borisov

Abstract

The study of soil microbial biomass and enzymatic activity of natural and anthropogenically transformed ecosystems was carried out. The catenas of virgin luvisols and chernozems of the Belogorye Natural Reserve and the catenas of arable soils were studied under similar geomorphological and lithological conditions. The activities of enzymes involved in the cycles of carbon (β-glucosidase and xylosidase), nitrogen (chitinase), and phosphorus (acid and alkaline phosphatase) was studied. It has been established that a decrease in soil microbial biomass as a result of plowing is not accompanied by an equivalent decrease in the enzymatic activity of the soil. Differences in the enzymatic activity of different soils types were revealed, which indicates differences in the structure of the microbial community and the type of phytocenoses. Patterns of changes in the enzymatic activity of soils in watershed areas, in the transit and accumulative parts of catenas, have been established. The values of specific activities of enzymes (enzymatic activities per unit of microbial biomass) were calculated. The obtained patterns of changes in the specific enzymatic activity of arable soils indicate that, despite the loss of organic matter and a decrease in microbial biomass as a result of plowing, the physiological efficiency of the microbial community of agrochernozem is higher than in virgin soil. High specific enzymatic activity in arable soils is associated with higher rate of enzyme production by soil microorganisms due to land use changes.

摘要对自然生态系统和人为改造生态系统的土壤微生物生物量和酶活性进行了研究。在相似的地貌、岩性条件下,对别洛戈里耶自然保护区原生土黑钙土链带和耕地土壤链带进行了研究。研究了参与碳(β-葡萄糖苷酶和木糖苷酶)、氮(几丁质酶)和磷(酸性和碱性磷酸酶)循环的酶的活性。已经确定,土壤微生物生物量的减少是耕作的结果,并不伴随着土壤酶活性的等效减少。不同土壤类型的酶活性存在差异,表明微生物群落结构和植物糖类型存在差异。流域土壤酶活性的变化模式,在传输线的过境部分和累积部分,已经建立。计算酶的比活性(单位微生物生物量的酶活性)。所获得的耕地土壤比酶活性的变化模式表明,尽管耕作导致有机质损失和微生物生物量减少,但黑土土壤微生物群落的生理效率高于未开垦土壤。耕地土壤的高比酶活性与土壤微生物由于土地利用变化而产生更高的酶的速率有关。
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引用次数: 0
Ecofriendly Management of Pieris brassicae in Brassica oleracea: A Review 甘蓝中青花螟的生态管理研究进展
Pub Date : 2023-11-28 DOI: 10.1134/s2079086423060117
Meenakshi, Sapna Thakur, Kanika Choudhary, Rakesh Kumar, Sunil Kumar, Dixit Sharma

Abstract

Cabbage, Brassica oleracea, is the leafy vegetable of Brassicaceae family. Leafy vegetables are unique among the many vegetable groups due to their high carotene and ascorbic acid content. It is consumed all over the world. Cabbage’s high nutritional value makes it more herbivores, among them Pieris brassiace is major pest causing huge damage in seedlings, vegetative and flowering stages of plant. Leaves and head of cabbage are damaged thus interfering with the growth of the plant and marketability of the cabbage. But persistent usage of artificial chemical pesticides for pest control has a number of detrimental outcomes including harm to wild species and pest resistance development. Therefore, there is need of substitute methods that are used for management of such pest that are easily biodegradable, ecofriendly and cost-effective. So, for the continuing management of this pest, effective bio-control agents should be used in conjunction with the cultural control techniques in Integrated Pest Management (IPM) systems. IPM aids in minimizing ecological damage and reliance on chemical pesticides. IPM uses different methods for pest management, i.e., natural enemies, entomopathogenic organisms and botanical insecticides that are being, reported.

摘要白菜(Brassica oleracea)是芸苔科叶类蔬菜。叶类蔬菜因其高胡萝卜素和抗坏血酸含量而在众多蔬菜中独树一帜。它在世界各地都被消费。白菜的高营养价值使其更具草食性,其中青花粉蚧是对植物苗期、营养期和开花期危害巨大的主要害虫。白菜的叶和头受到损害,从而影响植株的生长和白菜的销路。但是,持续使用人工化学农药防治害虫有许多有害的后果,包括对野生物种的伤害和害虫抗性的发展。因此,需要一种易于生物降解、对生态友好和具有成本效益的替代方法来管理这类害虫。因此,在害虫综合治理(IPM)系统中,有效的生物防治剂应与培养防治技术相结合,以实现对该害虫的持续治理。IPM有助于减少生态破坏和对化学农药的依赖。IPM使用不同的虫害管理方法,即正在报道的天敌、昆虫病原生物和植物杀虫剂。
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引用次数: 0
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