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Secondary ion mass spectrometry for bone research. 用于骨骼研究的二次离子质谱。
IF 1.6 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002820
Christine Kern, Stefanie Kern, Anja Henss, Marcus Rohnke

The purpose of this Tutorial is to highlight the suitability of time-of-flight secondary ion mass spectrometry (ToF-SIMS) and OrbiTrap™ SIMS (Orbi-SIMS) in bone research by introducing fundamentals and best practices of bone analysis with these mass spectrometric imaging (MSI) techniques. The Tutorial includes sample preparation, determination of best-suited measurement settings, data acquisition, and data evaluation, as well as a brief overview of SIMS applications in bone research in the current literature. SIMS is a powerful analytical technique that allows simultaneous analysis and visualization of mineralized and nonmineralized bone tissue, bone marrow as well as implanted biomaterials, and interfaces between bone and implants. Compared to histological staining, which is the standard analytical procedure in bone research, SIMS provides chemical imaging of nonstained bone sections that offers insights beyond what is conventionally obtained. The Tutorial highlights the versatility of ToF- and Orbi-SIMS in addressing important questions in bone research. By illustrating the value of these MSI techniques, it demonstrates how they can contribute to advance progress in bone research.

本教程旨在通过介绍利用飞行时间二次离子质谱(ToF-SIMS)和 OrbiTrap™ SIMS(Orbi-SIMS)质谱成像(MSI)技术进行骨质分析的基本原理和最佳实践,突出强调这些技术在骨质研究中的适用性。教程包括样品制备、确定最合适的测量设置、数据采集和数据评估,以及简要概述当前文献中 SIMS 在骨研究中的应用。SIMS 是一种功能强大的分析技术,可同时分析和观察矿化和非矿化骨组织、骨髓、植入生物材料以及骨与植入物之间的界面。与骨研究中的标准分析程序--组织学染色法相比,SIMS 可对未染色的骨切片进行化学成像,从而提供超出传统方法的洞察力。教程强调了 ToF- 和 Orbi-SIMS 在解决骨研究中的重要问题方面的多功能性。通过说明这些 MSI 技术的价值,它展示了这些技术如何有助于推动骨研究的进展。
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引用次数: 0
Influence of titanium and zirconia substrates on the synthesis of inflammatory mediators. 钛和氧化锆底物对炎症介质合成的影响。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002659
João Moura Neto, Lais Medeiros Cardoso, Taisa Nogueira Pansani, Larissa M S C Raucci, Carlos Alberto de Souza Costa, Fernanda G Basso

The repair and homeostasis of peri-implant tissues depend on several factors such as the local presence of pathogenic bacteria and their products. Among other events, peri-implant tissue response is also related to the implant material used, which interferes with cells and extracellular matrix interactions, affecting the osseointegration process. In this study, the influence of zirconia (Zr) and titanium (Ti) substrates on the response of preosteoblasts (MC3T3) and murine macrophages (RAW 264.7) exposed to lipopolysaccharide (LPS, P. gingivalis) was evaluated. Zr and Ti disks were obtained and subjected to surface roughness standardization, which was analyzed by scanning electronic microscopy (SEM). The cells were subsequently cultured on Zr and Ti surfaces in AlphaMEM culture medium for 24 h, followed by LPS stimulus for 4 h. The production of reactive oxygen species (ROS) and gene expression of inflammatory markers were determined. SEM images showed that Ti disks exhibited higher surface roughness than that of Zr disks. Cells that seeded onto Ti and Zr had increased expression of inflammatory mediators and ROS production in the presence of LPS; however, such cell responses were more evident for Ti disks. These data indicate that contact of cells with Zr surfaces may lead to a lower inflammatory potential than Ti surfaces. Elucidation of the inflammatory response triggered by LPS for cells in contact with titanium and zirconia may contribute to the selection of materials for installation of osseointegrated implants.

种植体周围组织的修复和内环境平衡取决于几个因素,如病原菌及其产物的局部存在。在其他事件中,种植体周围组织反应也与所使用的种植体材料有关,它干扰细胞和细胞外基质的相互作用,影响骨整合过程。本研究评估了氧化锆(Zr)和钛(Ti)底物对暴露于脂多糖(LPS, P. gingivalis)的成骨前细胞(MC3T3)和小鼠巨噬细胞(RAW 264.7)反应的影响。制备了Zr和Ti圆盘,对其表面粗糙度进行了标准化,并通过扫描电子显微镜(SEM)进行了分析。在AlphaMEM培养基中分别在Zr和Ti表面培养24 h, LPS刺激4 h。检测小鼠活性氧(ROS)的产生和炎症标志物的基因表达。SEM图像显示,Ti盘的表面粗糙度高于Zr盘。在LPS存在的情况下,Ti和Zr上的细胞炎症介质的表达和ROS的产生增加;然而,这种细胞反应在钛圆盘上更为明显。这些数据表明,细胞与Zr表面接触可能导致比Ti表面更低的炎症电位。阐明LPS对接触钛和氧化锆的细胞引发的炎症反应,可能有助于骨整合种植体安装材料的选择。
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引用次数: 0
Linking drivers of plant per- and polyfluoroalkyl substance (PFAS) uptake to agricultural land management decisions. 将植物全氟和多氟烷基物质(PFAS)吸收的驱动因素与农业土地管理决策联系起来。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002772
Alex E Scearce, Caleb P Goossen, Rachel E Schattman, Ellen B Mallory, Jean D MaCrae

Widespread contamination of the per- and polyfluoroalkyl substance (PFAS) in agricultural areas is largely attributed to the application of sewage sludge in which the PFAS can be concentrated. This creates a pathway for these contaminants to enter the food chain and, by extension, causes human health and economic concerns. One barrier to managing land with PFAS contamination is the variation in reported plant uptake levels across studies. A review of the literature suggests that the variation in plant uptake is influenced by a host of factors including the composition of PFAS chemicals, soil conditions, and plant physiology. Factors include (1) the chemical components of the PFAS such as the end group and chain length; (2) drivers of soil sorption such as the presence of soil organic matter (SOM), multivalent cation concentration, pH, soil type, and micropore volume; and (3) crop physiological features such as fine root area, percentage of mature roots, and leaf blade area. The wide range of driving factors highlights a need for research to elucidate these mechanisms through additional experiments as well as collect more data to support refined models capable of predicting PFAS uptake in a range of cropping systems. A conceptual framework presented here links drivers of plant PFAS uptake found in the literature to phytomanagement approaches such as modified agriculture or phytoremediation to provide decision support to land managers.

全氟烷基和多氟烷基物质(PFAS)在农业地区的广泛污染在很大程度上归因于可浓缩PFAS的污水污泥的应用。这为这些污染物进入食物链创造了一个途径,并由此引起人类健康和经济问题。管理PFAS污染土地的一个障碍是不同研究中报告的植物吸收水平的差异。对文献的回顾表明,植物吸收的变化受到一系列因素的影响,包括PFAS化学物质的组成、土壤条件和植物生理。影响因素包括:(1)PFAS的化学成分,如端基和链长;(2)土壤吸附的驱动因素,如土壤有机质(SOM)、多价阳离子浓度、pH、土壤类型和微孔体积;(3)细根面积、成熟根百分比、叶片面积等作物生理特征。广泛的驱动因素表明,需要通过更多的实验来阐明这些机制,并收集更多的数据来支持能够预测各种种植系统中PFAS吸收的精确模型。本文提出了一个概念框架,将文献中发现的植物吸收PFAS的驱动因素与植物管理方法(如改良农业或植物修复)联系起来,为土地管理者提供决策支持。
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引用次数: 2
Ultraflexible polyvinylidene fluoride film based amperometric enzyme-free sensor for selective detection of uric acid in a trace level. 基于超柔性聚偏氟乙烯薄膜的无酶安培传感器,用于微量尿酸的选择性检测。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002792
Abhisek Maikap, Riju Karmakar, Ajit Kumar Meikap, Subhra Samanta

The present invention describes a novel flexible nanosensor for the electrochemical detection of uric acid (UA) present in urine. The synthesized graphite-boron nanocomposite with an average thickness of ∼32 nm was grown up on a flexible polyvinylidene fluoride film with an average thickness of ∼50 μm and it acts as a nonenzymatic sensor for UA. The developed flexible sensor showed a prominent reduction peak in cyclic voltammetry and amperometric response with the presence of different concentrations of aqueous UA solution. In the electrochemical study, the redox peak was generated near ∼-0.42 V with a detection limit of around ∼2.09 μM as the bottom level. The high robustness of the developed sensor originated from the polymeric film base and the rapid response time of ∼0.5 s for detecting UA present in human urine. The interference property of the sensor was confirmed in the presence of bilirubin and creatinine as an eventual reference toward selectivity. The phase and morphology of the sensor surface were extensively observed before and after sensing to comprehend the electrochemical interaction between the sensor and target molecules. The generated quantitative results of the integrated system were verified by testing known and unknown concentrations of UA solutions.

本发明描述了一种用于电化学检测尿液中尿酸(UA)的新型柔性纳米传感器。将合成的平均厚度为~ 32 nm的石墨-硼纳米复合材料生长在平均厚度为~ 50 μm的柔性聚偏氟乙烯薄膜上,并作为UA的非酶传感器。所研制的柔性传感器在不同浓度的UA水溶液存在时,在循环伏安和安培响应中表现出明显的还原峰。在电化学研究中,氧化还原峰在~ -0.42 V附近产生,检测限为~ 2.09 μM左右。所开发的传感器的高鲁棒性源于聚合物膜基和检测人体尿液中UA的快速响应时间(~ 0.5 s)。在胆红素和肌酐的存在下,传感器的干扰特性被证实为选择性的最终参考。在传感前后广泛观察传感器表面的物相和形貌,以了解传感器与目标分子之间的电化学相互作用。通过测试已知和未知浓度的UA溶液,验证了集成系统生成的定量结果。
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引用次数: 0
Theoretical study of electronic sum frequency generation spectroscopy to assess the buried interfaces. 电子和频产生谱评价埋藏界面的理论研究。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002698
Yogesh Kumar, Suman Dhami, Ravindra Pandey

This article provides a comprehensive theoretical background of electronic sum frequency generation (ESFG), a second-order nonlinear spectroscopy technique. ESFG is utilized to investigate both exposed and buried interfaces, which are challenging to study using conventional spectroscopic methods. By overlapping two incident beams at the interface, ESFG generates a beam at the sum of their frequencies, allowing for the extraction of valuable interfacial molecular information such as molecular orientation and density of states present at interfaces. The unique surface selectivity of ESFG arises from the absence of inversion symmetry at the interfaces. However, detecting weak signals from interfaces requires the ultrafast lasers to generate a sufficiently strong signal. By understanding the theoretical foundations of ESFG presented in this article, readers can gain a solid grasp of the basics of ESFG spectroscopy.

本文介绍了一种二阶非线性光谱技术——电子和频产生的理论背景。ESFG用于研究暴露界面和埋藏界面,这是传统光谱方法难以研究的。通过在界面处重叠两个入射光束,ESFG产生一个频率之和的光束,从而可以提取有价值的界面分子信息,如分子取向和界面上存在的状态密度。ESFG独特的表面选择性源于界面处不存在反转对称性。然而,检测来自界面的微弱信号需要超快激光器产生足够强的信号。通过了解本文中介绍的ESFG的理论基础,读者可以对ESFG光谱的基础知识有一个扎实的掌握。
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引用次数: 2
Immobilization of horseradish peroxidase with zwitterionic polymer material for industrial phenolic removal. 两性离子高分子材料固定化辣根过氧化物酶的工业苯酚脱除。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002657
Qi Wang, Hao Fu, Xiaoyu Qi, Lei Zhang, Hongyan Ma

Horseradish peroxidase (HRP) is a hemoglobin composed of a single peptide chain that catalyzes the oxidation of various substrates such as phenol and aniline in the presence of hydrogen peroxide via its iron-porphyrin catalytic center. This enzyme is widely used in industrial phenol removal, food additives, biomedicine, and clinical test reagents due to its rapid reaction rate and obvious reaction outcomes. However, the large-scale use of HRP in industrial applications still faces numerous challenges, including activity, stability, and sustainability. This study demonstrates that when peroxidase is immobilized in zwitterionic polymer hydrogels, polycarboxybetaine (PCB) and polysulfobetaine (PSB), the properties of the enzyme are improved. PCB and PSB-embedded HRP exhibit a 6.11 and 1.53 times increase in Kcat/Km value, respectively, compared to the free enzyme. The immobilized enzyme also experiences increased activity over a range of temperatures and better tolerance to extreme pH and organic solvents, including formaldehyde. In addition, immobilized HRP exhibits excellent performance in storage and reproducibility. Remarkably, PCB-HRP still retains 80% of the initial activity after a 6-week storage period and can still attain the initial catalytic level of the free enzyme after six repeated cycles. It also removes 90% of phenol within 12 min, surpassing the current pharmacy on the market. These experimental results indicated that we have successfully designed a set of stable and efficient support substrates for horseradish peroxidase, which enhances its suitability for deployment in industrial applications.

辣根过氧化物酶(HRP)是一种由单肽链组成的血红蛋白,它通过铁卟啉催化中心在过氧化氢的存在下催化各种底物的氧化,如苯酚和苯胺。该酶反应速度快,反应效果明显,广泛应用于工业除酚、食品添加剂、生物医药、临床试验试剂等领域。然而,HRP在工业应用中的大规模使用仍然面临着许多挑战,包括活性、稳定性和可持续性。研究表明,将过氧化物酶固定在两性离子聚合物水凝胶、聚羧基甜菜碱(PCB)和聚磺基甜菜碱(PSB)中,酶的性能得到了改善。与游离酶相比,PCB和psb包埋的HRP的Kcat/Km值分别提高了6.11倍和1.53倍。固定化酶在一定温度范围内的活性也会增加,对极端pH值和有机溶剂(包括甲醛)的耐受性也会提高。此外,固定化HRP在存储和再现性方面表现出优异的性能。值得注意的是,PCB-HRP在6周的贮存期后仍保持80%的初始活性,并且在6次重复循环后仍能达到游离酶的初始催化水平。它还可以在12分钟内去除90%的苯酚,超过目前市场上的药店。这些实验结果表明,我们成功设计了一套稳定高效的辣根过氧化物酶载体底物,增强了其在工业应用中的适用性。
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引用次数: 0
Development of electronic sum frequency generation spectrophotometer to assess the buried interfaces. 电子和频产生分光光度计的研制。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002697
Suman Dhami, Yogesh Kumar, Ravindra Pandey

The interfacial region between two bulk media in organic semiconductor based devices, such as organic field-effect transistors (OFETs), organic light-emitting diodes, and organic photovoltaics, refers to the region where two different materials such as an organic material and an electrode come in contact with each other. Although the interfacial region contains a significantly smaller fraction of molecules compared to the bulk, it is the primary site where many photoinduced excited state processes occur, such as charge transfer, charge recombination, separation, energy transfer processes, etc. All such photoinduced processes have a dependence on molecular orientation and density of states at the interfaces, therefore having an understanding of the interfacial region is essential. However, conventional spectroscopic techniques, such as surface-enhanced Raman scattering, x-ray photoelectron spectroscopy, atomic force microscopy, etc., face limitations in probing the orientation and density of states of interfacial molecules. Therefore, there is a need for noninvasive techniques capable of efficiently investigating the interfaces. The electronic sum frequency generation (ESFG) technique offers an interface selectivity based on the principle that the second-order nonlinear susceptibility tensor, within the electric dipole approximation, is zero in the isotropic bulk but nonzero at interfaces. This selectivity makes ESFG a promising spectroscopy tool to probe the molecular orientation and density of states at the buried interface. For beginners interested in employing ESFG to study the density of states at the interface, a detailed description of the experimental setup is provided here.

在基于有机半导体的器件中,如有机场效应晶体管(ofet)、有机发光二极管和有机光伏中,两种大块介质之间的界面区域是指两种不同材料(如有机材料和电极)相互接触的区域。虽然界面区所含的分子比体区要少得多,但它是许多光致激发态过程发生的主要场所,如电荷转移、电荷重组、分离、能量转移过程等。所有这些光诱导过程都依赖于界面上的分子取向和态密度,因此了解界面区域是必不可少的。然而,传统的光谱技术,如表面增强拉曼散射、x射线光电子能谱、原子力显微镜等,在探测界面分子的取向和状态密度方面存在局限性。因此,需要能够有效地研究接口的非侵入性技术。电子和频生成(ESFG)技术提供了一种基于二阶非线性磁化率张量原理的界面选择性,在电偶极近似下,各向同性体中为零,而在界面处为非零。这种选择性使ESFG成为一种很有前途的光谱工具,用于探测埋藏界面处的分子取向和状态密度。对于有兴趣使用ESFG来研究界面态密度的初学者,这里提供了实验设置的详细描述。
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引用次数: 1
PFAS (per- and polyfluoroalkyl substance)-free molded fiber: The future is already here. 无PFAS(全氟和多氟烷基物质)模制纤维:未来已经到来。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-07-01 DOI: 10.1116/6.0002756
Mehdi Tajvidi

With renewed interest in food packaging materials that can be both recyclable and compostable and the environmental concerns about plastic pollution in the terrestrial and aquatic ecosystems, molded fiber food packaging is experiencing an unprecedented demand around the globe. However, the phase-out of per- and polyfluoroalkyl substances (PFASs), commonly used as a water/grease resistant agent in food contact molded materials in many jurisdictions, has posed a significant challenge to the industry. This perspective outlines a recently developed solution to replace PFASs through the application of a layer of cellulose nanofibrils on the surface of molded fiber objects.

随着人们对可回收和可堆肥的食品包装材料的重新兴趣,以及对陆地和水生生态系统中塑料污染的环境问题的关注,模塑纤维食品包装在全球范围内正经历着前所未有的需求。然而,在许多司法管辖区,全氟烷基和多氟烷基物质(PFASs)通常用作食品接触模塑材料中的抗水/抗脂剂,其逐步淘汰对该行业构成了重大挑战。这一观点概述了最近开发的一种解决方案,通过在模塑纤维物体表面应用一层纤维素纳米原纤维来取代全氟丙烷。
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引用次数: 1
Evidence of compost contamination with per- and polyfluoroalkyl substances (PFAS) from "compostable" food serviceware. 来自“可堆肥”食品餐具的全氟和多氟烷基物质(PFAS)污染堆肥的证据。
IF 2.1 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-05-01 DOI: 10.1116/6.0002746
Caleb P Goossen, Rachel E Schattman, Jean D MacRae

Per- and polyfluoroalkyl substances (PFAS) have been used to waterproof and greaseproof food serviceware for decades. Health concerns about these compounds have drawn attention to the potential for contamination of the food system. Finished compost (n = 3) made from manure and food serviceware labeled "compostable" generated at a large fair was found to contain 12 or 13 of the 28 PFAS compounds sampled for, in concentrations ranging from 1.1 to 183 μg/kg (Σ28PFAS range = 209-455 μg/kg). Of note, perfluorooctanoic acid, a known carcinogen, was found at concentrations between 47.2 and 55.5 μg/kg. In contrast, fresh manure contained only perfluoroctanesulfonic acid at 3.7 μg/kg, and separated food waste from the fair composted with grass clippings and livestock bedding had no detectable PFAS in 2022, and Σ28PFAS = 9.6 μg/kg in 2019. Including compostable serviceware in compost likely contaminates the finished compost and threatens surrounding groundwater and surface waters, in addition to increasing potential crop uptake.

全氟烷基和多氟烷基物质(PFAS)用于防水和防油食品器皿已有几十年的历史。对这些化合物的健康担忧引起了人们对食品系统可能受到污染的关注。由大型集市上生产的粪便和标记为“可堆肥”的食品餐具制成的成品堆肥(n = 3)被发现含有28种PFAS化合物中的12或13种,浓度范围为1.1至183 μg/kg (Σ28PFAS范围= 209-455 μg/kg)。值得注意的是,已知致癌物全氟辛酸的浓度在47.2至55.5 μg/kg之间。相比之下,新鲜粪便中全氟辛烷磺酸的含量仅为3.7 μg/kg, 2022年与剪草和牲畜床上堆肥的博览会分离食物垃圾中未检测到PFAS, 2019年Σ28PFAS = 9.6 μg/kg。在堆肥中加入可堆肥的服务工具可能会污染成品堆肥,并威胁到周围的地下水和地表水,此外还会增加潜在的作物吸收。
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引用次数: 2
Back to the basics of time-of-flight secondary ion mass spectrometry data analysis of bio-related samples. II. Data processing and display. 生物相关样品的飞行时间二次离子质谱数据分析的基本原理。II.数据处理和显示。
IF 1.6 4区 医学 Q4 BIOPHYSICS Pub Date : 2023-05-01 DOI: 10.1116/6.0002633
Daniel J Graham, Lara J Gamble

This is the second half of a two-part Tutorial on the basics of the time-of-flight secondary ion mass spectrometry (ToF-SIMS) analysis of bio-related samples. Part I of this Tutorial series covers planning for a ToF-SIMS experiment, preparing and shipping samples, and collecting ToF-SIMS data. This Tutorial aims at helping the ToF-SIMS user to process, display, and interpret ToF-SIMS data. ToF-SIMS provides detailed chemical information about surfaces but comes with a steep learning. The purpose of this Tutorial is to provide the reader with a solid foundation in the ToF-SIMS data analysis.

本教程由两部分组成,后半部分介绍飞行时间二次离子质谱 (ToF-SIMS) 分析生物相关样品的基础知识。本系列教程的第一部分包括 ToF-SIMS 实验的规划、样品的制备和运输以及 ToF-SIMS 数据的采集。本教程旨在帮助 ToF-SIMS 用户处理、显示和解释 ToF-SIMS 数据。ToF-SIMS 可提供详细的表面化学信息,但学习难度很大。本教程旨在为读者打下坚实的 ToF-SIMS 数据分析基础。
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引用次数: 0
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