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Identification and expression analysis of two steamer-like retrotransposons in the Chilean blue mussel (Mytilus chilensis) 智利蓝贻贝(Mytilus chilensis)中两个类似蒸汽机的转座子的鉴定和表达分析
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-04-26 DOI: 10.1186/s40659-024-00498-x
Gloria Arriagada, Johan Quezada, Nicolas Merino-Veliz, Fernando Avilés, Diana Tapia-Cammas, Jorge Gomez, Daniela Curotto, Juan A. Valdes, Pablo A. Oyarzún, Cristian Gallardo-Escárate, Michael J. Metzger, Marco Alvarez
Disseminated neoplasia (DN) is a proliferative cell disorder of the circulatory system of bivalve mollusks. The disease is transmitted between individuals and can also be induced by external chemical agents such as bromodeoxyuridine. In Mya arenaria, we have cloned and characterized an LTR-retrotransposon named Steamer. Steamer mRNA levels and gene copy number correlates with DN and can be used as a marker of the disease. So far, the only mollusk where a retrotransposon expression relates to DN is Mya arenaria. On the other hand, it has been reported that the Chilean blue mussel Mytilus chilensis can also suffers DN. Our aim was to identify retrotransposons in Mytilus chilensis and to study their expression levels in the context of disseminated neoplasia. Here we show that 7.1% of individuals collected in August 2018, from two farming areas, presents morphological characteristics described in DN. Using Steamer sequence to interrogate the transcriptome of M. chilensis we found two putative retrotransposons, named Steamer-like elements (MchSLEs). MchSLEs are present in the genome of M. chilensis and MchSLE1 is indeed an LTR-retrotransposon. Neither expression, nor copy number of the reported MchSLEs correlate with DN status but both are expressed at different levels among individual animals. We also report that in cultured M. chilensis haemocytes MchSLEs1 expression can be induced by bromodeoxyuridine. We conclude that SLEs present in Mytilus chilensis are differentially expressed among individuals and do not correlate with disseminated neoplasia. Treatment of haemocytes with a stressor like bromodeoxyuridine induces expression of MchSLE1 suggesting that in Mytilus chilensis environmental stressors can induce activation of LTR-retrotransposon.
播散性肿瘤病(DN)是双壳类软体动物循环系统的一种细胞增生性疾病。这种疾病可在个体间传播,也可由溴脱氧尿苷等外部化学物质诱发。我们克隆并鉴定了一种名为 Steamer 的 LTR 反转座子。Steamer mRNA水平和基因拷贝数与DN相关,可用作该疾病的标记。迄今为止,逆转录转座子的表达与 DN 有关的软体动物只有 Mya arenaria。另一方面,有报道称智利蓝贻贝(Mytilus chilensis)也会感染 DN。我们的目的是鉴定智利贻贝中的逆转录转座子,并研究它们在播散性肿瘤中的表达水平。在此,我们表明,2018 年 8 月从两个养殖区采集的个体中有 7.1%呈现出 DN 所描述的形态特征。利用Steamer序列询问M. chilensis的转录组,我们发现了两个推定的逆转录转座子,命名为Steamer样元件(MchSLEs)。MchSLEs 存在于 M. chilensis 的基因组中,而且 MchSLE1 确实是一个 LTR 逆转录转座子。所报道的 MchSLEs 的表达和拷贝数均与 DN 状态无关,但两者在不同动物个体中的表达水平不同。我们还报告说,在培养的 M. chilensis 血细胞中,溴脱氧尿苷可诱导 MchSLEs1 的表达。我们的结论是,存在于智利贻贝中的 SLEs 在不同个体中的表达量不同,而且与播散性肿瘤无关。用溴脱氧尿苷等应激源处理血细胞可诱导 MchSLE1 的表达,这表明在智利贻贝中,环境应激源可诱导 LTR 反转座子的活化。
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引用次数: 0
Noncoding RNAs in skeletal development and disorders 骨骼发育和骨骼疾病中的非编码 RNA
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-04-22 DOI: 10.1186/s40659-024-00497-y
Qing Yao, Tailin He, Jian-You Liao, Rongdong Liao, Xiaohao Wu, Lijun Lin, Guozhi Xiao
Protein-encoding genes only constitute less than 2% of total human genomic sequences, and 98% of genetic information was previously referred to as “junk DNA”. Meanwhile, non-coding RNAs (ncRNAs) consist of approximately 60% of the transcriptional output of human cells. Thousands of ncRNAs have been identified in recent decades, and their essential roles in the regulation of gene expression in diverse cellular pathways associated with fundamental cell processes, including proliferation, differentiation, apoptosis, and metabolism, have been extensively investigated. Furthermore, the gene regulation networks they form modulate gene expression in normal development and under pathological conditions. In this review, we integrate current information about the classification, biogenesis, and function of ncRNAs and how these ncRNAs support skeletal development through their regulation of critical genes and signaling pathways in vivo. We also summarize the updated knowledge of ncRNAs involved in common skeletal diseases and disorders, including but not limited to osteoporosis, osteoarthritis, rheumatoid arthritis, scoliosis, and intervertebral disc degeneration, by highlighting their roles established from in vivo, in vitro, and ex vivo studies.
编码蛋白质的基因只占人类基因组总序列的不到 2%,98% 的遗传信息以前被称为 "垃圾 DNA"。与此同时,非编码 RNA(ncRNA)约占人类细胞转录输出的 60%。近几十年来,已经发现了数千种 ncRNA,它们在与增殖、分化、凋亡和新陈代谢等基本细胞过程相关的各种细胞通路中调控基因表达的重要作用已得到广泛研究。此外,它们形成的基因调控网络在正常发育和病理条件下调节基因表达。在这篇综述中,我们整合了当前关于 ncRNA 的分类、生物发生和功能的信息,以及这些 ncRNA 如何通过调控体内关键基因和信号通路来支持骨骼发育。我们还总结了与常见骨骼疾病和失调(包括但不限于骨质疏松症、骨关节炎、类风湿性关节炎、脊柱侧弯和椎间盘变性)有关的 ncRNA 的最新知识,重点介绍了这些 ncRNA 在体内、体外和体外研究中发挥的作用。
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引用次数: 0
Cx43 hemichannels and panx1 channels contribute to ethanol-induced astrocyte dysfunction and damage Cx43 半通道和 panx1 通道有助于乙醇诱导的星形胶质细胞功能障碍和损伤
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-04-04 DOI: 10.1186/s40659-024-00493-2
Gonzalo I. Gómez, Tanhia F. Alvear, Daniela A. Roa, Arantza Farias-Pasten, Sergio A. Vergara, Luis A. Mellado, Claudio J. Martinez-Araya, Juan Prieto-Villalobos, Claudia García-Rodríguez, Natalia Sánchez, Juan C. Sáez, Fernando C. Ortíz, Juan A. Orellana
Alcohol, a widely abused drug, significantly diminishes life quality, causing chronic diseases and psychiatric issues, with severe health, societal, and economic repercussions. Previously, we demonstrated that non-voluntary alcohol consumption increases the opening of Cx43 hemichannels and Panx1 channels in astrocytes from adolescent rats. However, whether ethanol directly affects astroglial hemichannels and, if so, how this impacts the function and survival of astrocytes remains to be elucidated. Clinically relevant concentrations of ethanol boost the opening of Cx43 hemichannels and Panx1 channels in mouse cortical astrocytes, resulting in the release of ATP and glutamate. The activation of these large-pore channels is dependent on Toll-like receptor 4, P2X7 receptors, IL-1β and TNF-α signaling, p38 mitogen-activated protein kinase, and inducible nitric oxide (NO) synthase. Notably, the ethanol-induced opening of Cx43 hemichannels and Panx1 channels leads to alterations in cytokine secretion, NO production, gliotransmitter release, and astrocyte reactivity, ultimately impacting survival. Our study reveals a new mechanism by which ethanol impairs astrocyte function, involving the sequential stimulation of inflammatory pathways that further increase the opening of Cx43 hemichannels and Panx1 channels. We hypothesize that targeting astroglial hemichannels could be a promising pharmacological approach to preserve astrocyte function and synaptic plasticity during the progression of various alcohol use disorders.
酒精是一种被广泛滥用的药物,会大大降低生活质量,引发慢性疾病和精神问题,对健康、社会和经济造成严重影响。此前,我们曾证实,非自愿饮酒会增加青少年大鼠星形胶质细胞中 Cx43 半通道和 Panx1 通道的开放。然而,乙醇是否会直接影响星形胶质细胞半通道,如果会,这又会如何影响星形胶质细胞的功能和存活,这些问题仍有待阐明。临床相关浓度的乙醇会促进小鼠皮质星形胶质细胞中 Cx43 半通道和 Panx1 通道的开放,从而导致 ATP 和谷氨酸的释放。这些大孔通道的激活依赖于 Toll 样受体 4、P2X7 受体、IL-1β 和 TNF-α 信号、p38 丝裂原活化蛋白激酶和诱导型一氧化氮(NO)合酶。值得注意的是,乙醇诱导的 Cx43 半通道和 Panx1 通道开放会导致细胞因子分泌、NO 生成、神经胶质递质释放和星形胶质细胞反应性的改变,最终影响存活率。我们的研究揭示了乙醇损害星形胶质细胞功能的新机制,其中涉及炎症通路的连续刺激,而炎症通路会进一步增加 Cx43 半ich通道和 Panx1 通道的开放。我们假设,在各种酒精使用障碍的进展过程中,以星形胶质半通道为靶点可能是保护星形胶质细胞功能和突触可塑性的一种很有前景的药理学方法。
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引用次数: 0
Galectins in epithelial-mesenchymal transition: roles and mechanisms contributing to tissue repair, fibrosis and cancer metastasis 上皮-间质转化过程中的加连蛋白:促进组织修复、纤维化和癌症转移的作用和机制
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-04-04 DOI: 10.1186/s40659-024-00490-5
Elisa Perez-Moreno, Claudia Oyanadel, Adely de la Peña, Ronny Hernández, Francisca Pérez-Molina, Claudia Metz, Alfonso González, Andrea Soza
Galectins are soluble glycan-binding proteins that interact with a wide range of glycoproteins and glycolipids and modulate a broad spectrum of physiological and pathological processes. The expression and subcellular localization of different galectins vary among tissues and cell types and change during processes of tissue repair, fibrosis and cancer where epithelial cells loss differentiation while acquiring migratory mesenchymal phenotypes. The epithelial-mesenchymal transition (EMT) that occurs in the context of these processes can include modifications of glycosylation patterns of glycolipids and glycoproteins affecting their interactions with galectins. Moreover, overexpression of certain galectins has been involved in the development and different outcomes of EMT. This review focuses on the roles and mechanisms of Galectin-1 (Gal-1), Gal-3, Gal-4, Gal-7 and Gal-8, which have been involved in physiologic and pathogenic EMT contexts.
凝集素是一种可溶性糖结合蛋白,能与多种糖蛋白和糖脂相互作用,并能调节多种生理和病理过程。在组织修复、纤维化和癌变过程中,上皮细胞会失去分化能力,同时获得迁移性间充质表型,不同组织和细胞类型的上皮细胞会失去分化能力,同时获得迁移性间充质表型。在这些过程中发生的上皮-间充质转化(EMT)可能包括糖脂和糖蛋白糖基化模式的改变,从而影响它们与半连接蛋白的相互作用。此外,某些 galectins 的过度表达也与 EMT 的发展和不同结果有关。本综述将重点讨论 Galectin-1(Gal-1)、Gal-3、Gal-4、Gal-7 和 Gal-8 在生理性和致病性 EMT 中的作用和机制。
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引用次数: 0
Glutaminolysis regulates endometrial fibrosis in intrauterine adhesion via modulating mitochondrial function. 谷氨酰胺溶解通过调节线粒体功能调节宫腔内粘连的子宫内膜纤维化。
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1186/s40659-024-00492-3
Pei Chen, Chaoshuang Ye, Yunke Huang, Bingning Xu, Tianyu Wu, Yuanhang Dong, Yang Jin, Li Zhao, Changchang Hu, Jingxia Mao, Ruijin Wu

Background: Endometrial fibrosis, a significant characteristic of intrauterine adhesion (IUA), is caused by the excessive differentiation and activation of endometrial stromal cells (ESCs). Glutaminolysis is the metabolic process of glutamine (Gln), which has been implicated in multiple types of organ fibrosis. So far, little is known about whether glutaminolysis plays a role in endometrial fibrosis.

Methods: The activation model of ESCs was constructed by TGF-β1, followed by RNA-sequencing analysis. Changes in glutaminase1 (GLS1) expression at RNA and protein levels in activated ESCs were verified experimentally. Human IUA samples were collected to verify GLS1 expression in endometrial fibrosis. GLS1 inhibitor and glutamine deprivation were applied to ESCs models to investigate the biological functions and mechanisms of glutaminolysis in ESCs activation. The IUA mice model was established to explore the effect of glutaminolysis inhibition on endometrial fibrosis.

Results: We found that GLS1 expression was significantly increased in activated ESCs models and fibrotic endometrium. Glutaminolysis inhibition by GLS1 inhibitor bis-2-(5-phenylacetamido-1,2,4-thiadiazol-2-yl) ethyl sulfide (BPTES or glutamine deprivation treatment suppressed the expression of two fibrotic markers, α-SMA and collagen I, as well as the mitochondrial function and mTORC1 signaling in ESCs. Furthermore, inhibition of the mTORC1 signaling pathway by rapamycin suppressed ESCs activation. In IUA mice models, BPTES treatment significantly ameliorated endometrial fibrosis and improved pregnancy outcomes.

Conclusion: Glutaminolysis and glutaminolysis-associated mTOR signaling play a role in the activation of ESCs and the pathogenesis of endometrial fibrosis through regulating mitochondrial function. Glutaminolysis inhibition suppresses the activation of ESCs, which might be a novel therapeutic strategy for IUA.

背景:子宫内膜纤维化是宫腔内粘连(IUA)的一个重要特征,是由子宫内膜基质细胞(ESC)过度分化和活化引起的。谷氨酰胺分解是谷氨酰胺(Gln)的代谢过程,与多种类型的器官纤维化有关。迄今为止,人们对谷氨酰胺溶解是否在子宫内膜纤维化中发挥作用知之甚少:方法:利用 TGF-β1 建立了 ESCs 活化模型,然后进行 RNA 序列分析。实验验证了活化的 ESCs 中谷氨酰胺酶 1(GLS1)在 RNA 和蛋白质水平上的表达变化。收集人类 IUA 样本以验证 GLS1 在子宫内膜纤维化中的表达。将 GLS1 抑制剂和谷氨酰胺剥夺应用于 ESCs 模型,研究谷氨酰胺溶解在 ESCs 活化过程中的生物学功能和机制。建立IUA小鼠模型,探讨谷氨酰胺酵解抑制对子宫内膜纤维化的影响:结果:我们发现,GLS1在活化的ESCs模型和纤维化的子宫内膜中表达明显增加。通过GLS1抑制剂双-2-(5-苯乙酰氨基-1,2,4-噻二唑-2-基)乙基硫醚(BPTES)抑制谷氨酰胺分解或谷氨酰胺剥夺处理,可抑制两种纤维化标志物α-SMA和胶原蛋白I的表达,并抑制ESCs的线粒体功能和mTORC1信号传导。此外,雷帕霉素抑制了 mTORC1 信号通路,从而抑制了 ESCs 的活化。在IUA小鼠模型中,BPTES治疗能明显改善子宫内膜纤维化并改善妊娠结局:结论:谷氨酰胺酵解和谷氨酰胺酵解相关的mTOR信号转导通过调节线粒体功能在激活ESCs和子宫内膜纤维化的发病机制中发挥作用。抑制谷氨酰胺酵解可抑制 ESCs 的活化,这可能是 IUA 的一种新型治疗策略。
{"title":"Glutaminolysis regulates endometrial fibrosis in intrauterine adhesion via modulating mitochondrial function.","authors":"Pei Chen, Chaoshuang Ye, Yunke Huang, Bingning Xu, Tianyu Wu, Yuanhang Dong, Yang Jin, Li Zhao, Changchang Hu, Jingxia Mao, Ruijin Wu","doi":"10.1186/s40659-024-00492-3","DOIUrl":"10.1186/s40659-024-00492-3","url":null,"abstract":"<p><strong>Background: </strong>Endometrial fibrosis, a significant characteristic of intrauterine adhesion (IUA), is caused by the excessive differentiation and activation of endometrial stromal cells (ESCs). Glutaminolysis is the metabolic process of glutamine (Gln), which has been implicated in multiple types of organ fibrosis. So far, little is known about whether glutaminolysis plays a role in endometrial fibrosis.</p><p><strong>Methods: </strong>The activation model of ESCs was constructed by TGF-β1, followed by RNA-sequencing analysis. Changes in glutaminase1 (GLS1) expression at RNA and protein levels in activated ESCs were verified experimentally. Human IUA samples were collected to verify GLS1 expression in endometrial fibrosis. GLS1 inhibitor and glutamine deprivation were applied to ESCs models to investigate the biological functions and mechanisms of glutaminolysis in ESCs activation. The IUA mice model was established to explore the effect of glutaminolysis inhibition on endometrial fibrosis.</p><p><strong>Results: </strong>We found that GLS1 expression was significantly increased in activated ESCs models and fibrotic endometrium. Glutaminolysis inhibition by GLS1 inhibitor bis-2-(5-phenylacetamido-1,2,4-thiadiazol-2-yl) ethyl sulfide (BPTES or glutamine deprivation treatment suppressed the expression of two fibrotic markers, α-SMA and collagen I, as well as the mitochondrial function and mTORC1 signaling in ESCs. Furthermore, inhibition of the mTORC1 signaling pathway by rapamycin suppressed ESCs activation. In IUA mice models, BPTES treatment significantly ameliorated endometrial fibrosis and improved pregnancy outcomes.</p><p><strong>Conclusion: </strong>Glutaminolysis and glutaminolysis-associated mTOR signaling play a role in the activation of ESCs and the pathogenesis of endometrial fibrosis through regulating mitochondrial function. Glutaminolysis inhibition suppresses the activation of ESCs, which might be a novel therapeutic strategy for IUA.</p>","PeriodicalId":9084,"journal":{"name":"Biological Research","volume":"57 1","pages":"13"},"PeriodicalIF":6.7,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10983700/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140334634","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The long-chain flavodoxin FldX1 improves the biodegradation of 4-hydroxyphenylacetate and 3-hydroxyphenylacetate and counteracts the oxidative stress associated to aromatic catabolism in Paraburkholderia xenovorans. 长链黄酮毒素 FldX1 可改善 4-hydroxyphenylacetate 和 3-hydroxyphenylacetate 的生物降解,并抵消 Paraburkholderia xenovorans 中与芳香族分解代谢相关的氧化应激。
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-04-01 DOI: 10.1186/s40659-024-00491-4
Laura Rodríguez-Castro, Roberto E Durán, Valentina Méndez, Flavia Dorochesi, Daniela Zühlke, Katharina Riedel, Michael Seeger

Background: Bacterial aromatic degradation may cause oxidative stress. The long-chain flavodoxin FldX1 of Paraburkholderia xenovorans LB400 counteracts reactive oxygen species (ROS). The aim of this study was to evaluate the protective role of FldX1 in P. xenovorans LB400 during the degradation of 4-hydroxyphenylacetate (4-HPA) and 3-hydroxyphenylacetate (3-HPA).

Methods: The functionality of FldX1 was evaluated in P. xenovorans p2-fldX1 that overexpresses FldX1. The effects of FldX1 on P. xenovorans were studied measuring growth on hydroxyphenylacetates, degradation of 4-HPA and 3-HPA, and ROS formation. The effects of hydroxyphenylacetates (HPAs) on the proteome (LC-MS/MS) and gene expression (qRT-PCR) were quantified. Bioaugmentation with strain p2-fldX1 of 4-HPA-polluted soil was assessed, measuring aromatic degradation (HPLC), 4-HPA-degrading bacteria, and plasmid stability.

Results: The exposure of P. xenovorans to 4-HPA increased the formation of ROS compared to 3-HPA or glucose. P. xenovorans p2-fldX1 showed an increased growth on 4-HPA and 3-HPA compared to the control strain WT-p2. Strain p2-fldX1 degraded faster 4-HPA and 3-HPA than strain WT-p2. Both WT-p2 and p2-fldX1 cells grown on 4-HPA displayed more changes in the proteome than cells grown on 3-HPA in comparison to glucose-grown cells. Several enzymes involved in ROS detoxification, including AhpC2, AhpF, AhpD3, KatA, Bcp, CpoF1, Prx1 and Prx2, were upregulated by hydroxyphenylacetates. Downregulation of organic hydroperoxide resistance (Ohr) and DpsA proteins was observed. A downregulation of the genes encoding scavenging enzymes (katE and sodB), and gstA and trxB was observed in p2-fldX1 cells, suggesting that FldX1 prevents the antioxidant response. More than 20 membrane proteins, including porins and transporters, showed changes in expression during the growth of both strains on hydroxyphenylacetates. An increased 4-HPA degradation by recombinant strain p2-fldX1 in soil microcosms was observed. In soil, the strain overexpressing the flavodoxin FldX1 showed a lower plasmid loss, compared to WT-p2 strain, suggesting that FldX1 contributes to bacterial fitness. Overall, these results suggest that recombinant strain p2-fldX1 is an attractive bacterium for its application in bioremediation processes of aromatic compounds.

Conclusions: The long-chain flavodoxin FldX1 improved the capability of P. xenovorans to degrade 4-HPA in liquid culture and soil microcosms by protecting cells against the degradation-associated oxidative stress.

背景:细菌的芳香降解可能会导致氧化应激。Paraburkholderia xenovorans LB400 的长链黄酮毒素 FldX1 可抵消活性氧(ROS)。本研究的目的是评估 FldX1 在 Paraburkholderia xenovorans LB400 降解 4-hydroxyphenylacetate (4-HPA) 和 3-hydroxyphenylacetate (3-HPA) 过程中的保护作用:方法:在过表达 FldX1 的 P. xenovorans p2-fldX1 中评估了 FldX1 的功能。方法:在过量表达 FldX1 的 P. xenovorans p2-fldX1 中评估了 FldX1 的功能。研究了 FldX1 对 P. xenovorans 的影响,测量了其在羟基苯乙酸酯上的生长、4-HPA 和 3-HPA 的降解以及 ROS 的形成。还量化了羟基苯乙酸盐(HPAs)对蛋白质组(LC-MS/MS)和基因表达(qRT-PCR)的影响。用菌株 p2-fldX1 对受 4-HPA 污染的土壤进行生物增强评估,测量芳烃降解(HPLC)、4-HPA 降解细菌和质粒稳定性:结果:与 3-HPA 或葡萄糖相比,P. xenovorans 暴露于 4-HPA 会增加 ROS 的形成。与对照菌株 WT-p2 相比,P. xenovorans p2-fldX1 在 4-HPA 和 3-HPA 上的生长速度加快。与 WT-p2 菌株相比,p2-fldX1 菌株降解 4-HPA 和 3-HPA 的速度更快。与生长在葡萄糖中的细胞相比,生长在 4-HPA 上的 WT-p2 和 p2-fldX1 细胞比生长在 3-HPA 上的细胞显示出更多的蛋白质组变化。参与 ROS 解毒的几种酶,包括 AhpC2、AhpF、AhpD3、KatA、Bcp、CpoF1、Prx1 和 Prx2,在羟基苯乙酸盐的作用下上调。观察到有机过氧化氢抗性(Ohr)和 DpsA 蛋白下调。在 p2-fldX1 细胞中观察到编码清除酶(katE 和 sodB)、gstA 和 trxB 的基因下调,这表明 FldX1 阻止了抗氧化反应。在两种菌株在羟基苯乙酸盐上的生长过程中,包括孔蛋白和转运体在内的 20 多种膜蛋白的表达发生了变化。在土壤微生态系统中,重组菌株 p2-fldX1 对 4-HPA 的降解增加。在土壤中,与 WT-p2 菌株相比,过表达黄酮毒素 FldX1 的菌株的质粒损失较少,这表明 FldX1 对细菌的适应性有贡献。总之,这些结果表明,重组菌株 p2-fldX1 是一种有吸引力的细菌,可用于芳香族化合物的生物修复过程:结论:长链黄酮毒素 FldX1 通过保护细胞免受与降解相关的氧化应激,提高了 P. xenovorans 在液体培养和土壤微生态系统中降解 4-HPA 的能力。
{"title":"The long-chain flavodoxin FldX1 improves the biodegradation of 4-hydroxyphenylacetate and 3-hydroxyphenylacetate and counteracts the oxidative stress associated to aromatic catabolism in Paraburkholderia xenovorans.","authors":"Laura Rodríguez-Castro, Roberto E Durán, Valentina Méndez, Flavia Dorochesi, Daniela Zühlke, Katharina Riedel, Michael Seeger","doi":"10.1186/s40659-024-00491-4","DOIUrl":"10.1186/s40659-024-00491-4","url":null,"abstract":"<p><strong>Background: </strong>Bacterial aromatic degradation may cause oxidative stress. The long-chain flavodoxin FldX1 of Paraburkholderia xenovorans LB400 counteracts reactive oxygen species (ROS). The aim of this study was to evaluate the protective role of FldX1 in P. xenovorans LB400 during the degradation of 4-hydroxyphenylacetate (4-HPA) and 3-hydroxyphenylacetate (3-HPA).</p><p><strong>Methods: </strong>The functionality of FldX1 was evaluated in P. xenovorans p2-fldX1 that overexpresses FldX1. The effects of FldX1 on P. xenovorans were studied measuring growth on hydroxyphenylacetates, degradation of 4-HPA and 3-HPA, and ROS formation. The effects of hydroxyphenylacetates (HPAs) on the proteome (LC-MS/MS) and gene expression (qRT-PCR) were quantified. Bioaugmentation with strain p2-fldX1 of 4-HPA-polluted soil was assessed, measuring aromatic degradation (HPLC), 4-HPA-degrading bacteria, and plasmid stability.</p><p><strong>Results: </strong>The exposure of P. xenovorans to 4-HPA increased the formation of ROS compared to 3-HPA or glucose. P. xenovorans p2-fldX1 showed an increased growth on 4-HPA and 3-HPA compared to the control strain WT-p2. Strain p2-fldX1 degraded faster 4-HPA and 3-HPA than strain WT-p2. Both WT-p2 and p2-fldX1 cells grown on 4-HPA displayed more changes in the proteome than cells grown on 3-HPA in comparison to glucose-grown cells. Several enzymes involved in ROS detoxification, including AhpC2, AhpF, AhpD3, KatA, Bcp, CpoF1, Prx1 and Prx2, were upregulated by hydroxyphenylacetates. Downregulation of organic hydroperoxide resistance (Ohr) and DpsA proteins was observed. A downregulation of the genes encoding scavenging enzymes (katE and sodB), and gstA and trxB was observed in p2-fldX1 cells, suggesting that FldX1 prevents the antioxidant response. More than 20 membrane proteins, including porins and transporters, showed changes in expression during the growth of both strains on hydroxyphenylacetates. An increased 4-HPA degradation by recombinant strain p2-fldX1 in soil microcosms was observed. In soil, the strain overexpressing the flavodoxin FldX1 showed a lower plasmid loss, compared to WT-p2 strain, suggesting that FldX1 contributes to bacterial fitness. Overall, these results suggest that recombinant strain p2-fldX1 is an attractive bacterium for its application in bioremediation processes of aromatic compounds.</p><p><strong>Conclusions: </strong>The long-chain flavodoxin FldX1 improved the capability of P. xenovorans to degrade 4-HPA in liquid culture and soil microcosms by protecting cells against the degradation-associated oxidative stress.</p>","PeriodicalId":9084,"journal":{"name":"Biological Research","volume":"57 1","pages":"12"},"PeriodicalIF":6.7,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10983741/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140334574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MicroRNA-148b secreted by bovine oviductal extracellular vesicles enhance embryo quality through BPM/TGF-beta pathway. 牛输卵管细胞外囊泡分泌的 MicroRNA-148b 通过 BPM/TGF-beta 途径提高胚胎质量。
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-03-23 DOI: 10.1186/s40659-024-00488-z
Karina Cañón-Beltrán, Yulia N Cajas, Vasileios Almpanis, Sandra Guisado Egido, Alfonso Gutierrez-Adan, Encina M González, Dimitrios Rizos

Background: Extracellular vesicles (EVs) and their cargoes, including MicroRNAs (miRNAs) play a crucial role in cell-to-cell communication. We previously demonstrated the upregulation of bta-mir-148b in EVs from oviductal fluid of cyclic cows. This miRNA is linked to the TGF-β pathway in the cell proliferation. Our aim was to verify whether miR-148b is taken up by embryos through gymnosis, validate its target genes, and investigate the effect of miR-148b supplementation on early embryo development and quality.

Methods: Zygotes were cultured in SOF + 0.3% BSA (Control) or supplemented with: 1 µM miR-148b mimics during: D1-D7 (miR148b) or D1-D4 (miR148b-OV: representing miRNA effect in the oviduct) or D4-D7 (miR148b-UT: representing miRNA effect in the uterus) or 1 µM control mimics was used during: D1-D7 (CMimic). Embryos at ≥ 16-cells and D7 blastocysts (BD7) were collected to examine the mRNA abundance of transcripts linked to the TGF-β pathway (TGFBR2, SMAD1, SMAD2, SMAD3, SMAD5, BMPR2, RPS6KB1, POU5F1, NANOG), total cell number (TC), trophectoderm (TE), and inner cell mass (ICM) were also evaluated. One-way ANOVA was used for all analyses.

Results: We demonstrated that miR-148b can be taken up in both 16-cell embryos and BD7 by gymnosis, and we observed a decrease in SMAD5 mRNA, suggesting it's a potential target of miR-148b. Cleavage and blastocysts rates were not affected in any groups; however, supplementation of miR-148b mimics had a positive effect on TC, TE and ICM, with values of 136.4 ± 1.6, 92.5 ± 0.9, 43.9 ± 1.3 for miR148b and 135.3 ± 1.5, 92.6 ± 1.2, 42.7 ± 0.8, for miR148b-OV group. Furthermore, mRNA transcripts of SMAD1 and SMAD5 were decreased (P ≤ 0.001) in 16-cell embryos and BD7 from miR148b and miR148b-OV groups, while POU5F1 and NANOG were upregulated (P ≤ 0.001) in BD7 and TGFBR2 was only downregulated in 16-cell embryos. pSMAD1/5 levels were higher in the miR148b and miR148b-OV groups.

Conclusions: Our findings suggest that supplementation of bta-miR-148b mimics during the entire culture period (D1 - D7) or from D1 - D4 improves embryo quality and influences the TGF-β signaling pathway by altering the transcription of genes associated with cellular differentiation and proliferation. This highlights the importance of miR-148b on embryo quality and development.

背景:细胞外囊泡(EVs)及其载体,包括微RNAs(miRNAs),在细胞间通讯中发挥着至关重要的作用。我们以前曾证实,在周期性奶牛输卵管液的 EVs 中,bta-mir-148b 上调。这种 miRNA 与细胞增殖过程中的 TGF-β 通路有关。我们的目的是验证miR-148b是否通过体细胞形成被胚胎吸收,验证其靶基因,并研究补充miR-148b对早期胚胎发育和质量的影响:在 SOF + 0.3% BSA(对照组)或补充 1 µM miR-148b 的 SOF + 0.3% BSA(对照组)中培养小胚胎:1 µM miR-148b模拟物:D1-D7(miR148b)或 D1-D4(miR148b-OV:代表 miRNA 在输卵管中的作用)或 D4-D7(miR148b-UT:代表 miRNA 在子宫中的作用),或在 D1-D7 期间使用 1 µM 对照模拟物(CMimic):D1-D7(CMimic)。收集≥ 16 个细胞的胚胎和 D7 囊胚(BD7),检测与 TGF-β 通路相关的转录本(TGFBR2、SMAD1、SMAD2、SMAD3、SMAD5、BMPR2、RPS6KB1、POU5F1、NANOG)的 mRNA 丰度,还评估了细胞总数(TC)、滋养层(TE)和内细胞团(ICM)。所有分析均采用单因素方差分析:结果:我们证实,miR-148b可在16细胞胚胎和BD7中被体细胞吞噬,而且我们观察到SMAD5 mRNA减少,这表明它是miR-148b的一个潜在靶标。然而,补充 miR-148b 模拟物对 TC、TE 和 ICM 有积极影响,miR148b 组为 136.4 ± 1.6、92.5 ± 0.9、43.9 ± 1.3,miR148b-OV 组为 135.3 ± 1.5、92.6 ± 1.2、42.7 ± 0.8。此外,在 miR148b 组和 miR148b-OV 组的 16 细胞胚胎和 BD7 中,SMAD1 和 SMAD5 的 mRNA 转录物降低(P ≤ 0.001),而在 BD7 中,POU5F1 和 NANOG 上调(P ≤ 0.001),TGFBR2 仅在 16 细胞胚胎中下调,pSMAD1/5 水平在 miR148b 组和 miR148b-OV 组中较高:我们的研究结果表明,在整个培养期(D1 - D7)或从 D1 - D4 补充 bta-miR-148b 模拟物可提高胚胎质量,并通过改变与细胞分化和增殖相关的基因转录影响 TGF-β 信号通路。这突显了 miR-148b 对胚胎质量和发育的重要性。
{"title":"MicroRNA-148b secreted by bovine oviductal extracellular vesicles enhance embryo quality through BPM/TGF-beta pathway.","authors":"Karina Cañón-Beltrán, Yulia N Cajas, Vasileios Almpanis, Sandra Guisado Egido, Alfonso Gutierrez-Adan, Encina M González, Dimitrios Rizos","doi":"10.1186/s40659-024-00488-z","DOIUrl":"10.1186/s40659-024-00488-z","url":null,"abstract":"<p><strong>Background: </strong>Extracellular vesicles (EVs) and their cargoes, including MicroRNAs (miRNAs) play a crucial role in cell-to-cell communication. We previously demonstrated the upregulation of bta-mir-148b in EVs from oviductal fluid of cyclic cows. This miRNA is linked to the TGF-β pathway in the cell proliferation. Our aim was to verify whether miR-148b is taken up by embryos through gymnosis, validate its target genes, and investigate the effect of miR-148b supplementation on early embryo development and quality.</p><p><strong>Methods: </strong>Zygotes were cultured in SOF + 0.3% BSA (Control) or supplemented with: 1 µM miR-148b mimics during: D1-D7 (miR148b) or D1-D4 (miR148b-OV: representing miRNA effect in the oviduct) or D4-D7 (miR148b-UT: representing miRNA effect in the uterus) or 1 µM control mimics was used during: D1-D7 (CMimic). Embryos at ≥ 16-cells and D7 blastocysts (BD7) were collected to examine the mRNA abundance of transcripts linked to the TGF-β pathway (TGFBR2, SMAD1, SMAD2, SMAD3, SMAD5, BMPR2, RPS6KB1, POU5F1, NANOG), total cell number (TC), trophectoderm (TE), and inner cell mass (ICM) were also evaluated. One-way ANOVA was used for all analyses.</p><p><strong>Results: </strong>We demonstrated that miR-148b can be taken up in both 16-cell embryos and BD7 by gymnosis, and we observed a decrease in SMAD5 mRNA, suggesting it's a potential target of miR-148b. Cleavage and blastocysts rates were not affected in any groups; however, supplementation of miR-148b mimics had a positive effect on TC, TE and ICM, with values of 136.4 ± 1.6, 92.5 ± 0.9, 43.9 ± 1.3 for miR148b and 135.3 ± 1.5, 92.6 ± 1.2, 42.7 ± 0.8, for miR148b-OV group. Furthermore, mRNA transcripts of SMAD1 and SMAD5 were decreased (P ≤ 0.001) in 16-cell embryos and BD7 from miR148b and miR148b-OV groups, while POU5F1 and NANOG were upregulated (P ≤ 0.001) in BD7 and TGFBR2 was only downregulated in 16-cell embryos. pSMAD1/5 levels were higher in the miR148b and miR148b-OV groups.</p><p><strong>Conclusions: </strong>Our findings suggest that supplementation of bta-miR-148b mimics during the entire culture period (D1 - D7) or from D1 - D4 improves embryo quality and influences the TGF-β signaling pathway by altering the transcription of genes associated with cellular differentiation and proliferation. This highlights the importance of miR-148b on embryo quality and development.</p>","PeriodicalId":9084,"journal":{"name":"Biological Research","volume":"57 1","pages":"11"},"PeriodicalIF":6.7,"publicationDate":"2024-03-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10960404/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140193304","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
YME1L-mediated mitophagy protects renal tubular cells against cellular senescence under diabetic conditions. 在糖尿病条件下,YME1L介导的有丝分裂可保护肾小管细胞免于细胞衰老。
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-03-17 DOI: 10.1186/s40659-024-00487-0
Yuanyuan Luo, Lingxiao Zhang, Ning Su, Lerong Liu, Tongfeng Zhao

Background: The senescence of renal tubular epithelial cells (RTECs) is crucial in the progression of diabetic kidney disease (DKD). Accumulating evidence suggests a close association between insufficient mitophagy and RTEC senescence. Yeast mitochondrial escape 1-like 1 (YME1L), an inner mitochondrial membrane metalloprotease, maintains mitochondrial integrity. Its functions in DKD remain unclear. Here, we investigated whether YME1L can prevent the progression of DKD by regulating mitophagy and cellular senescence.

Methods: We analyzed YME1L expression in renal tubules of DKD patients and mice, explored transcriptomic changes associated with YME1L overexpression in RTECs, and assessed its impact on RTEC senescence and renal dysfunction using an HFD/STZ-induced DKD mouse model. Tubule-specific overexpression of YME1L was achieved through the use of recombinant adeno-associated virus 2/9 (rAAV 2/9). We conducted both in vivo and in vitro experiments to evaluate the effects of YME1L overexpression on mitophagy and mitochondrial function. Furthermore, we performed LC-MS/MS analysis to identify potential protein interactions involving YME1L and elucidate the underlying mechanisms.

Results: Our findings revealed a significant decrease in YME1L expression in the renal tubules of DKD patients and mice. However, tubule-specific overexpression of YME1L significantly alleviated RTEC senescence and renal dysfunction in the HFD/STZ-induced DKD mouse model. Moreover, YME1L overexpression exhibited positive effects on enhancing mitophagy and improving mitochondrial function both in vivo and in vitro. Mechanistically, our LC-MS/MS analysis uncovered a crucial mitophagy receptor, BCL2-like 13 (BCL2L13), as an interacting partner of YME1L. Furthermore, YME1L was found to promote the phosphorylation of BCL2L13, highlighting its role in regulating mitophagy.

Conclusions: This study provides compelling evidence that YME1L plays a critical role in protecting RTECs from cellular senescence and impeding the progression of DKD. Overexpression of YME1L demonstrated significant therapeutic potential by ameliorating both RTEC senescence and renal dysfunction in the DKD mice. Moreover, our findings indicate that YME1L enhances mitophagy and improves mitochondrial function, potentially through its interaction with BCL2L13 and subsequent phosphorylation. These novel insights into the protective mechanisms of YME1L offer a promising strategy for developing therapies targeting DKD.

背景:肾小管上皮细胞(RTECs)的衰老是糖尿病肾病(DKD)进展的关键。越来越多的证据表明,有丝分裂不足与 RTEC 的衰老密切相关。酵母线粒体逸出1样1(YME1L)是一种线粒体内膜金属蛋白酶,可维持线粒体的完整性。它在 DKD 中的功能仍不清楚。在此,我们研究了YME1L是否能通过调节有丝分裂和细胞衰老来阻止DKD的进展:我们分析了YME1L在DKD患者和小鼠肾小管中的表达,探讨了与YME1L在RTECs中过表达相关的转录组变化,并使用HFD/STZ诱导的DKD小鼠模型评估了YME1L对RTEC衰老和肾功能障碍的影响。通过使用重组腺相关病毒2/9(rAAV 2/9)实现了YME1L在肾小管特异性过表达。我们进行了体内和体外实验,以评估 YME1L 过表达对有丝分裂吞噬和线粒体功能的影响。此外,我们还进行了LC-MS/MS分析,以确定涉及YME1L的潜在蛋白质相互作用,并阐明其潜在机制:结果:我们的研究结果显示,YME1L在DKD患者和小鼠肾小管中的表达量明显下降。然而,在HFD/STZ诱导的DKD小鼠模型中,肾小管特异性过表达YME1L能显著缓解RTEC衰老和肾功能障碍。此外,YME1L的过表达在体内和体外均表现出增强有丝分裂吞噬和改善线粒体功能的积极作用。从机理上讲,我们的LC-MS/MS分析发现了一个关键的有丝分裂受体BCL2-like 13(BCL2L13)是YME1L的相互作用伙伴。此外,研究还发现YME1L能促进BCL2L13的磷酸化,从而突出了它在调控有丝分裂中的作用:本研究提供了令人信服的证据,证明YME1L在保护RTECs免于细胞衰老和阻碍DKD进展方面发挥着关键作用。过表达 YME1L 可改善 DKD 小鼠 RTEC 的衰老和肾功能障碍,具有显著的治疗潜力。此外,我们的研究结果表明,YME1L可能通过与BCL2L13的相互作用以及随后的磷酸化作用,增强了有丝分裂吞噬功能并改善了线粒体功能。这些对YME1L保护机制的新见解为开发针对DKD的疗法提供了一种前景广阔的策略。
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引用次数: 0
Effects of latroeggtoxin-VI on dopamine and α-synuclein in PC12 cells and the implications for Parkinson's disease. 拉特罗格毒素-VI 对 PC12 细胞中多巴胺和 α-突触核蛋白的影响以及对帕金森病的影响。
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-03-16 DOI: 10.1186/s40659-024-00489-y
Dianmei Yu, Haiyan Wang, Yiwen Zhai, Zhixiang Lei, Minglu Sun, Si Chen, Panfeng Yin, Xianchun Wang

Background: Parkinson's disease (PD) is characterized by death of dopaminergic neurons leading to dopamine deficiency, excessive α-synuclein facilitating Lewy body formation, etc. Latroeggtoxin-VI (LETX-VI), a proteinaceous neurotoxin discovered from the eggs of spider L. tredecimguttatus, was previously found to promote the synthesis and release of PC12 cells, showing a great potential as a drug candidate for PD. However, the relevant mechanisms have not been understood completely. The present study explored the mechanism underlying the effects of LETX-VI on dopamine and α-synuclein of PC12 cells and the implications for PD.

Results: After PC12 cells were treated with LETX-VI, the level of dopamine was significantly increased in a dose-dependent way within a certain range of concentrations. Further mechanism analysis showed that LETX-VI upregulated the expression of tyrosine hydroxylase (TH) and L-dopa decarboxylase to enhance the biosynthesis of dopamine, and downregulated that of monoamine oxidase B to reduce the degradation of dopamine. At the same time, LETX-VI promoted the transport and release of dopamine through modulating the abundance and/or posttranslational modification of vesicular monoamine transporter 2 (VMAT2) and dopamine transporter (DAT). While the level of dopamine was increased by LETX-VI treatment, α-synuclein content was reduced by the spider toxin. α-Synuclein overexpression significantly decreased the dopamine level and LETX-VI efficiently alleviated the inhibitory action of excessive α-synuclein on dopamine. In the MPTP-induced mouse model of PD, application of LETX-VI ameliorated parkinsonian behaviors of the mice, and reduced the magnitude of MPTP-induced α-synuclein upregulation and TH downregulation. In addition, LETX-VI displayed neuroprotective effects by inhibiting MPTP-induced decrease in the numbers of TH-positive and Nissl-stained neurons in mouse brain tissues.

Conclusions: All the results demonstrate that LETX-VI promotes the synthesis and release of dopamine in PC12 cells via multiple mechanisms including preventing abnormal α-synuclein accumulation, showing implications in the prevention and treatment of PD.

背景:帕金森病(PD)的特征是多巴胺能神经元死亡导致多巴胺缺乏,过量的α-突触核蛋白促进路易体形成等。从蜘蛛 L. tredecimguttatus 的卵中发现的一种蛋白神经毒素 Latroeggtoxin-VI (LETX-VI),以前曾被发现能促进 PC12 细胞的合成和释放,显示出作为 PD 候选药物的巨大潜力。然而,相关机制尚未完全清楚。本研究探讨了LETX-VI对PC12细胞多巴胺和α-突触核蛋白的影响机制以及对PD的影响:结果:PC12 细胞经 LETX-VI 处理后,多巴胺水平在一定浓度范围内呈剂量依赖性显著升高。进一步的机理分析表明,LETX-VI可上调酪氨酸羟化酶(TH)和左旋多巴脱羧酶的表达,从而促进多巴胺的生物合成;下调单胺氧化酶B的表达,从而减少多巴胺的降解。同时,LETX-VI 通过调节囊泡单胺转运体 2(VMAT2)和多巴胺转运体(DAT)的丰度和/或翻译后修饰,促进多巴胺的转运和释放。α-突触核蛋白过表达会显著降低多巴胺水平,而LETX-VI能有效缓解过量α-突触核蛋白对多巴胺的抑制作用。在 MPTP 诱导的帕金森病小鼠模型中,应用 LETX-VI 可改善小鼠的帕金森行为,并降低 MPTP 诱导的 α 突触核蛋白上调和 TH 下调的幅度。此外,LETX-VI 还具有神经保护作用,可抑制 MPTP 诱导的小鼠脑组织中 TH 阳性和 Nissl 染色神经元数量的减少:所有研究结果表明,LETX-VI 可通过多种机制促进 PC12 细胞中多巴胺的合成和释放,包括防止α-突触核蛋白的异常积累,对预防和治疗帕金森病具有重要意义。
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引用次数: 0
Carbapenem-resistant hypervirulent ST23 Klebsiella pneumoniae with a highly transmissible dual-carbapenemase plasmid in Chile 智利带有高传播性双碳青霉烯酶质粒的碳青霉烯耐药高病毒性 ST23 肺炎克雷伯菌
IF 6.7 2区 生物学 Q1 BIOLOGY Pub Date : 2024-03-12 DOI: 10.1186/s40659-024-00485-2
Matías Gálvez-Silva, Patricio Arros, Camilo Berríos-Pastén, Aura Villamil, Paula I. Rodas, Ingrid Araya, Rodrigo Iglesias, Pamela Araya, Juan C. Hormazábal, Constanza Bohle, Yahua Chen, Yunn-Hwen Gan, Francisco P. Chávez, Rosalba Lagos, Andrés E. Marcoleta
The convergence of hypervirulence and carbapenem resistance in the bacterial pathogen Klebsiella pneumoniae represents a critical global health concern. Hypervirulent K. pneumoniae (hvKp) strains, frequently from sequence type 23 (ST23) and having a K1 capsule, have been associated with severe community-acquired invasive infections. Although hvKp were initially restricted to Southeast Asia and primarily antibiotic-sensitive, carbapenem-resistant hvKp infections are reported worldwide. Here, within the carbapenemase production Enterobacterales surveillance system headed by the Chilean Public Health Institute, we describe the isolation in Chile of a high-risk ST23 dual-carbapenemase-producing hvKp strain, which carbapenemase genes are encoded in a single conjugative plasmid. Phenotypic and molecular tests of this strain revealed an extensive resistance to at least 15 antibiotic classes and the production of KPC-2 and VIM-1 carbapenemases. Unexpectedly, this isolate lacked hypermucoviscosity, challenging this commonly used hvKp identification criteria. Complete genome sequencing and analysis confirmed the K1 capsular type, the KpVP-1 virulence plasmid, and the GIE492 and ICEKp10 genomic islands carrying virulence factors strongly associated with hvKp. Although this isolate belonged to the globally disseminated hvKp clonal group CG23-I, it is unique, as it formed a clade apart from a previously reported Chilean ST23 hvKp isolate and acquired an IncN KPC-2 plasmid highly disseminated in South America (absent in other hvKp genomes), but now including a class-I integron carrying blaVIM−1 and other resistance genes. Notably, this isolate was able to conjugate the double carbapenemase plasmid to an E. coli recipient, conferring resistance to 1st -5th generation cephalosporins (including combinations with beta-lactamase inhibitors), penicillins, monobactams, and carbapenems. We reported the isolation in Chile of high-risk carbapenem-resistant hvKp carrying a highly transmissible conjugative plasmid encoding KPC-2 and VIM-1 carbapenemases, conferring resistance to most beta-lactams. Furthermore, the lack of hypermucoviscosity argues against this trait as a reliable hvKp marker. These findings highlight the rapid evolution towards multi-drug resistance of hvKp in Chile and globally, as well as the importance of conjugative plasmids and other mobile genetic elements in this convergence. In this regard, genomic approaches provide valuable support to monitor and obtain essential information on these priority pathogens and mobile elements.
细菌病原体肺炎克雷伯氏菌(Klebsiella pneumoniae)的高致病性和碳青霉烯类耐药性趋于一致是全球健康关注的一个重要问题。肺炎克雷伯菌(hvKp)菌株通常来自序列 23 型(ST23),具有 K1 包囊,与严重的社区获得性侵袭性感染有关。虽然 hvKp 最初仅限于东南亚地区,而且主要对抗生素敏感,但耐碳青霉烯类的 hvKp 感染在世界各地都有报道。在智利公共卫生研究所领导的碳青霉烯酶生产肠杆菌监测系统中,我们描述了在智利分离到的一株高风险 ST23 双碳青霉烯酶生产 hvKp 菌株,其碳青霉烯酶基因编码在单个共轭质粒中。对该菌株进行的表型和分子检测显示,它对至少 15 种抗生素具有广泛的耐药性,并能产生 KPC-2 和 VIM-1 碳青霉烯酶。意想不到的是,该分离株缺乏高黏度,这对常用的 hvKp 鉴定标准提出了挑战。完整的基因组测序和分析证实了 K1 胶囊型、KpVP-1 毒力质粒以及携带与 hvKp 密切相关的毒力因子的 GIE492 和 ICEKp10 基因组岛。虽然该分离物属于全球传播的 hvKp 克隆组 CG23-I,但它是独一无二的,因为它与之前报道的智利 ST23 hvKp 分离物形成了一个支系,并获得了在南美洲高度传播的 IncN KPC-2 质粒(在其他 hvKp 基因组中不存在),但现在包括一个携带 blaVIM-1 和其他抗性基因的 I 类整合子。值得注意的是,该分离株能够将双碳青霉烯酶质粒连接到大肠杆菌受体上,从而产生对第一代至第五代头孢菌素(包括与β-内酰胺酶抑制剂的组合)、青霉素类、单内酰胺类和碳青霉烯类的耐药性。我们报告了在智利分离出的高风险碳青霉烯类耐药 hvKp,其携带的编码 KPC-2 和 VIM-1 碳青霉烯类酶的高传播性共轭质粒可使其对大多数β-内酰胺类药物产生耐药性。此外,由于缺乏高黏度,这一特征不能作为可靠的 hvKp 标记。这些发现突显了 hvKp 在智利和全球范围内向耐多药方向的快速进化,以及共轭质粒和其他移动遗传因子在这种趋同中的重要性。在这方面,基因组学方法为监测和获取有关这些重点病原体和移动元素的重要信息提供了宝贵的支持。
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