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Bioremediation of azo dyes using biogenic iron nanoparticles 生物源铁纳米颗粒对偶氮染料的生物修复
Pub Date : 2019-01-04 DOI: 10.15406/jmen.2019.07.00232
H. Sharma, P. Shirkot
From the beginning of human civilization natural matter was used to stain hides, decorate feathers and shells and paint stories on the walls of ancient caves to over 15,000 B.C. with black, white, yellow and reddish pigments made from ochre. After the Neolithic revolution the permanent settlement of man began resulting in new discoveries and inventions around 7,000-2,000 B.C. like production of textiles by adding various colorants to them.1 These natural organic colorants had timeless history of application, especially as textile dyes. The pioneer in discovery of synthetic dye was William Henry Perkin; a student at the Royal College of Chemistry who while making drug quinine from aniline produced thick dark sludge which he diluted with alcohol. This produced purple color ‘fast’ dye, resistant to washing and to the fading effects of light and was used to dye silk.
从人类文明开始,自然物质被用来在古代洞穴的墙壁上染色兽皮、装饰羽毛和贝壳,并用赭石制成的黑色、白色、黄色和红色颜料绘制故事,直到公元前15000多年。新石器时代革命后,人类的永久定居在公元前7000-2000年左右开始产生新的发现和发明,比如通过在纺织品中添加各种着色剂来生产纺织品。1这些天然有机着色剂有着永恒的应用历史,尤其是作为织物染料。发现合成染料的先驱是威廉·亨利·帕金;英国皇家化学学院的一名学生在用苯胺制造药物奎宁时,产生了厚厚的深色污泥,并用酒精稀释。这产生了紫色的“快速”染料,耐洗涤和光的褪色作用,并用于染色丝绸。
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引用次数: 5
Diagnosis of tuberculosis meningitis by using Trc4 and Is6110 primers in Bangladesh 孟加拉国使用Trc4和Is6110引物诊断结核性脑膜炎
Pub Date : 2019-01-03 DOI: 10.15406/jmen.2019.07.00229
Abu Naser Ibne Sattar, Sanjida Khondakar Setu, Towfique Hasan Firoz, S. Islam
Tuberculosis (TB) is a highly prevalent global human infection caused by Mycobacterium tuberculosis (MTB). One-third of the world’s population is infected with latent TB. Tuberculous meningitis (TBM) can occur as the sole manifestation of TB or concurrent with pulmonary or other extra pulmonary sites of infection.1,2 Tuberculosis (TB) is the major cause of death worldwide and is due to a single pathogen.3 TB meningitis in particular owes their existence to unsuspected, undiagnosed, or incompletely treated in the community. Mortality due to TB occurs mainly due to the neural form of TB, namely, TB meningitis. Delay in diagnosis and so in the start of effective treatment results in poor prognosis and sequalae in up to 25% of cases.4 Prompt diagnosis is critical for initiating appropriate therapy and facilitating measures to prevent dissemination of this highly contagious disease. The prevalence of TB meningitis remains largely underestimated because clinical manifestations are nonspecific in early stages of the disease and bacteriologic confirmation is available only for a small proportion of patients. Also, clinical diagnosis of TB meningitis is difficult due to its varied clinical presentations. Further, routinely used tests employed for clinical diagnosis of TB are inadequate to detect extrapulmonary forms of TB like TB meningitis. PCR is currently the most sensitive and rapid method to detect extra pulmonary Mycobacterium tuberculosis.5-7 We used as a new target TRC4, which was cloned and characterized previously in our laboratory (10). TRC4 is a conserved repetitive element with specificity for M. tuberculosis complex. The aim of this paper was to compare the efficiency of a PCR with a target chosen from this cloned fragment with that of a PCR with the widely used IS6110sequence in detecting M. tuberculosis in cerebrospinal fluid (CSF) samples from patients with meningitis. Materials and methods
结核病(TB)是由结核分枝杆菌(MTB)引起的一种高度流行的全球人类感染。世界上三分之一的人口感染了潜伏性结核病。结核性脑膜炎(TBM)可作为结核病的唯一表现或与肺部或其他肺外部位感染同时发生。1,2结核病(TB)是全世界死亡的主要原因,是由单一病原体引起的结核性脑膜炎的存在尤其要归功于社区中未被怀疑、未被诊断或未得到完全治疗。结核造成的死亡主要是由于结核的神经形式,即结核性脑膜炎。诊断的延误和有效治疗的开始导致预后不良和后遗症,在多达25%的病例中及时诊断对于开始适当治疗和促进预防这种高度传染性疾病传播的措施至关重要。结核性脑膜炎的患病率在很大程度上仍然被低估,因为在疾病的早期阶段临床表现是非特异性的,而且只有一小部分患者可获得细菌学证实。此外,结核性脑膜炎的临床诊断是困难的,由于其不同的临床表现。此外,用于结核病临床诊断的常规检测方法不足以发现肺外形式的结核病,如结核性脑膜炎。PCR是目前检测肺外结核分枝杆菌最灵敏、最快速的方法。5-7我们使用了TRC4作为新的靶点,该靶点之前在我们的实验室进行了克隆和鉴定(10)。TRC4是一个保守的重复元件,对结核分枝杆菌复合体具有特异性。本文的目的是比较从该克隆片段中选择目标的PCR与广泛使用的is6110序列的PCR检测脑膜炎患者脑脊液(CSF)样本中的结核分枝杆菌的效率。材料与方法
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引用次数: 0
Comparison of multiplex PCR against blood cultures for the identification of microorganisms in a cohort of patients with bloodstream infections  多重PCR与血液培养物鉴定血液感染患者微生物的比较
Pub Date : 2019-01-01 DOI: 10.15406/jmen.2019.07.00269
B. Eduardo, Corona-Nava Ana Karen, Martínez-Orozco José Arturo, Flores-Perez Elia Maria, Jimenez-Martinez Maria Elena, Mireles-Davalos Christian Daniel, S. Ángel, Ruiz Santillán Danna Patricia, Santillan Segura Francisco Javier
Blood Stream Infections (BSI) represent an important cause of morbidity and mortality worldwide. Most treatment decisions in these cases are made taking into consideration the results of blood cultures, which has been the most important diagnostic procedure to identify the causal agent when there is a clinical suspicion of BSI. However, there is a significant delay in results when conventional methods like these are performed.1 This diagnostic method, based on the isolation of a microorganism and its identification and susceptibility test using standard biochemical techniques, is a process that can generally take from 48 to 72 hrs, and whose performance is variable. If 2 to 4 samples are obtained (40 to 80 ml of blood) before starting antimicrobial treatment, an etiological agent is detected in 80 to 96% of cases.2 In patients with bacteremia, which frequently causes sepsis and septic shock, an early and appropriate administration of antimicrobial treatments affects directly in the patient’s prognosis.3,4 an inadequate treatment can duplicate mortality, which also increases a 7,6% each hour that therapy adjustment is delayed.5,6
血流感染(BSI)是世界范围内发病率和死亡率的重要原因。在这些病例中,大多数治疗决定都要考虑到血培养的结果,这是临床上怀疑BSI时确定病因的最重要的诊断程序。然而,当使用这些传统方法时,结果会有明显的延迟这种诊断方法基于微生物的分离及其鉴定和使用标准生化技术的敏感性试验,该过程通常需要48至72小时,其性能是可变的。如果在开始抗微生物治疗之前获得2至4个样本(40至80毫升血液),则在80%至96%的病例中检测到病原体对于经常引起败血症和感染性休克的菌血症患者,早期适当给予抗菌药物治疗直接影响患者的预后。不适当的治疗可以重复死亡率,这也使治疗调整延迟每小时增加7.6%
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引用次数: 0
Antiplasmodial activity of stem bark and leaves of Alstonia boonei (De Wild) 野桤木茎、皮和叶的抗疟原虫活性研究
Pub Date : 2019-01-01 DOI: 10.15406/jmen.2019.07.00267
F. Omoya, Taiwo Folayele Oyebola
Malaria is one of the world’s leading epidemic widely spread in tropical and subtropical areas.1 The disease kills 1 million people worldwide annually, and an estimated 700,000 of them are children.2 Malaria is said to kill a child every 30 seconds, since with the onset of severe malaria, death may occur within 24 h or less.3 In Nigeria, malaria accounts for 30%-50% morbidity and 25% mortality in infants (Idowu et al., 2010). According to world malaria report 2017, Nigeria accounted for the highest proportion of global malaria cases (27%).4 During the past 30 years, malaria parasites especially Plasmodium falciparum (P. falciparum) have rapidly developed resistance to commonly used antimalarial drugs.5 Due to the fact that effective vaccine to control malaria has not been successfully developed, hence antimalarial drugs are mainly focused. This has prompted research towards the development and discovery of new, safe, and affordable antimalarial chemotherapies. During last decade, several demonstrations have been conducted to explore antimalarial activity of many plants, including curcumin,6,7 green tea8 and others.9
疟疾是世界上主要的流行病之一,广泛传播于热带和亚热带地区全世界每年有100万人死于这种疾病,其中估计有70万是儿童据说每30秒就有一名儿童死于疟疾,因为严重疟疾发病后,可在24小时或更短时间内死亡在尼日利亚,疟疾占婴儿发病率的30%-50%和死亡率的25% (Idowu et al., 2010)。根据《2017年世界疟疾报告》,尼日利亚在全球疟疾病例中所占比例最高(27%)在过去的30年里,疟疾寄生虫,特别是恶性疟原虫(P. falciparum)迅速对常用的抗疟疾药物产生了耐药性由于控制疟疾的有效疫苗尚未成功开发,因此抗疟药物是重点。这促使研究朝着开发和发现新的、安全和负担得起的抗疟疾化疗的方向发展。在过去的十年中,许多植物的抗疟活性已经进行了一些研究,包括姜黄素、绿茶等
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引用次数: 7
Two species of Phytopythium (Pythiaceae, Pythiales) new to China 标题中国植藻科植藻属二新种
Pub Date : 2019-01-01 DOI: 10.15406/jmen.2019.07.00264
Xiaobo Zheng, Jia-Jia Chen, H. Feng
Abbreviations: BI, bayesian inference; BPP, bayesian posterior probabilities; BT, bootstrap; CMA, corn meal agar; CI, consistency index; Cox1, cytochrome c oxidase subunit 1; GTR, general time reversible; HI, homoplasy index; ITS, the internal transcribed spacer; MP, maximum parsimony; MPT, maximum parsimonious tree; NJAU, the College of Plant Protection, Nanjing Agricultural University; PCA, potato carrot agar; PCR, the polymerase chain reaction; RC, rescaled consistency index; RI, retention index; TL, descriptive tree statistics tree length.
缩写:BI,贝叶斯推理;BPP:贝叶斯后验概率;BT,引导;CMA,玉米粉琼脂;CI:一致性指数;Cox1,细胞色素c氧化酶亚基1;GTR,一般时间可逆;HI,同质性指数;ITS,内部转录间隔;MP,最大限度节俭;MPT:最大简约树;南京农业大学植物保护学院;PCA,马铃薯胡萝卜琼脂;PCR,聚合酶链反应;RC:标度一致性指数;RI:保留指数;TL,描述树统计树的长度。
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引用次数: 0
CRISPR technology-a brave new world for microbes CRISPR技术——微生物的美丽新世界
Pub Date : 2018-12-27 DOI: 10.15406/jmen.2018.06.00225
S. Wood
human genome and the possibilities of cutting out and replacing those pieces of the human genome that carry illness and disease. As can be anticipated, ethical issues abound as one contemplates moving in this direction. We give tribute to those who were the first to discover ways to transfer genetic material, but also greatly acknowledge all who have contributed to the efforts in genetic engineering of bacteria through the years, both preceding and following all major discoveries. Herbert Boyer and Stanley Cohen first accomplished genetic engineering as the direct transfer of DNA from one organism to another in 1972. Development work in this area led through the years to the first description of what would later be called CRISPR. It came from researcher Yoshizumi Ishino and his colleagues in 1987 at Osaka University. They accidentally cloned part of a CRISPR gene region together with the iap gene, their target of interest. Then most recently, the U.S. Patent and Trademark Office decided to grant two new CRISPR patents to UC Berkeley, home of Jennifer Doudna, a biochemist who many consider the creator of CRISPR, giving her legal ownership of the unique invention.
人类基因组以及切除和替换携带疾病的人类基因组片段的可能性。正如可以预见的那样,当人们考虑朝着这个方向前进时,道德问题比比皆是。我们向那些最早发现遗传物质转移方法的人致敬,但也非常感谢所有在所有重大发现之前和之后多年来为细菌基因工程做出贡献的人。Herbert Boyer和Stanley Cohen于1972年首次完成基因工程,将DNA从一个生物体直接转移到另一个生物体。多年来,这一领域的开发工作首次描述了后来被称为CRISPR的东西。它来自1987年大阪大学的研究员石野义泉和他的同事。他们意外地将CRISPR基因区域的一部分与他们感兴趣的靶点iap基因一起克隆了出来。最近,美国专利商标局决定向加州大学伯克利分校授予两项新的CRISPR专利,赋予她对这项独特发明的合法所有权。
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引用次数: 0
Marine peptides act as novel chemotherapeutic agent 海洋多肽是一种新型的化疗药物
Pub Date : 2018-12-27 DOI: 10.15406/jmen.2018.06.00227
V. Mishra, A. Srivastava
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引用次数: 4
Bioprospecting filamentous fungi from Puerto Rico for biotechnological applications  波多黎各丝状真菌生物技术应用的生物勘探
Pub Date : 2018-12-26 DOI: 10.15406/jmen.2018.06.00224
R. Giles, Luis J Barrios Babilonia, D. G. Vargas, Juan G Abreu Ramos, Carlos A Betancourt Velez, Eliseo A Lebron Burgos, Arnaldo J Roman Acevedo, Omar M Zayas Cruz, Jeffrey C. Zackeru
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引用次数: 1
Microbiomes of freshwater lake ecosystems  淡水湖生态系统的微生物组
Pub Date : 2018-12-05 DOI: 10.15406/jmen.2018.06.00223
N. Yadav, Divjot Kour, Ajar Nath Yadav
cold environments,7‒10 acidic/alkaline soil,11,12 drought13‒15 and plant associated.16‒20 Microbes play central roles in regulating elemental cycles like carbon, nitrogen, and sulfur. Lake is an area which is filled with water and surrounded by land. It is localized in a basin, apart from any river or other outlet that serves to feed or drain the lake. Microbiome varies among lakes with different environmental variables.
寒冷的环境,7-10酸性/碱性土壤,11,12干旱13-15和植物相关。16-20微生物在调节碳、氮和硫等元素循环中发挥着核心作用。湖是一个充满水和陆地环绕的区域。它位于一个盆地中,除了任何河流或其他用于湖泊供水或排水的出口。不同环境变量的湖泊微生物组各不相同。
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引用次数: 4
Production and characterization of orange pigment produced by Halophilic bacterium Salinococcus roseus isolated from Abattoir soil 从屠宰场土壤中分离的嗜盐细菌玫瑰盐球菌生产橙色色素及其特性
Pub Date : 2018-12-05 DOI: 10.15406/jmen.2018.06.00222
H. Usman, A. Farouq, A. Baki, N. Abdulkadir, G. Mustapha
The color determines the acceptance of a product and has paramount influence on human life. Many synthetic colors used in foodstuff, dyestuff, cosmetics and pharmaceutical manufacturing pose various hazardous effects like allergies, tumor, cancer and severe damages to the vital organs.1 Moreover, the effluent of synthetic dyes poses series threat to the environment conservation. Consequently, many synthetic colors have been banned due to their toxicological problems. With the increasing awareness about the toxic effects of synthetic colors and consumer safety, there is an increasing interest in the development of colors from natural sources.2 Pigments are the chemical substances that absorb the light of visible region. They produced color because of the chromophore, a molecule specific structure which captures the sun energy and causes an excitation of electron from external orbital to higher orbital, where the non-absorbed energy is refracted or reflected to be captured by eye.3 As the present trend throughout the world is shifting towards the use of eco-friendly and biodegradable commodities, the demand for natural colorants is increasing day by day. Natural pigments are sourced from ores, insects, plants and microbes. Among microbes, bacteria have immense potential to produced diverse bio-products and one such bio-product is pigments. Biopigments produced from microorganisms are preferred over those from plants because of their stability4 and availability for cultivation throughout the year.5 Bacterial pigment production is now one of the emerging field of research to demonstrate its potential for various industrial applications.6 Most of the bacterial pigment production is still at the R&D stage. Hence, work on the bacterial pigments should be intensified especially in finding cheap and suitable growth medium which can reduce the cost and increase its applicability for industrial production.7 Materials and methods
颜色决定了产品的接受度,对人类生活有着至关重要的影响。许多用于食品、染料、化妆品和药品生产的合成色素会造成各种危险的影响,如过敏、肿瘤、癌症和对重要器官的严重损害此外,合成染料废水对环境保护造成了一系列威胁。因此,许多合成色素由于其毒理学问题而被禁止使用。随着人们对合成色素的毒性作用和消费者安全意识的提高,人们对开发天然色素的兴趣越来越大色素是一种吸收可见光的化学物质。它们产生颜色是因为发色团,一种捕获太阳能量的分子特定结构,并引起电子从外部轨道到更高轨道的激发,在那里未被吸收的能量被折射或反射被眼睛捕获随着目前世界范围内的趋势转向使用生态友好和可生物降解的商品,对天然色素的需求日益增加。天然色素来源于矿石、昆虫、植物和微生物。在微生物中,细菌具有生产多种生物制品的巨大潜力,其中一种生物制品就是色素。从微生物中产生的生物色素比从植物中产生的生物色素更受欢迎,因为它们的稳定性和全年可栽培性细菌色素生产现在是一个新兴的研究领域,以证明其在各种工业应用方面的潜力大多数细菌色素的生产仍处于研发阶段。因此,应加强对细菌色素的研究,特别是寻找廉价和合适的生长介质,以降低成本并增加其在工业生产中的适用性材料与方法
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引用次数: 11
期刊
Journal of microbiology & experimentation
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