首页 > 最新文献

BMC Medical Informatics and Decision Making最新文献

英文 中文
Predicting high blood pressure using machine learning models in low- and middle-income countries. 在中低收入国家使用机器学习模型预测高血压。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-23 DOI: 10.1186/s12911-024-02634-9
Ekaba Bisong, Noor Jibril, Preethi Premnath, Elsy Buligwa, George Oboh, Adanna Chukwuma

Responding to the rising global prevalence of noncommunicable diseases (NCDs) requires improvements in the management of high blood pressure. Therefore, this study aims to develop an explainable machine learning model for predicting high blood pressure, a key NCD risk factor, using data from the STEPwise approach to NCD risk factor surveillance (STEPS) surveys. Nationally representative samples of adults aged 18-69 years were acquired from 57 countries spanning six World Health Organization (WHO) regions. Data harmonization and processing were performed to standardize the selected predictors and synchronize features across countries, yielding 41 variables, including demographic, behavioural, physical, and biochemical factors. Five machine learning models - logistic regression, k-nearest neighbours, random forest, XGBoost, and a fully connected neural network - were trained and evaluated at global, regional, and country-specific levels using an 80/20 train-test split. The models' performance was assessed using accuracy, precision, recall, and F1 score. Feature importance analysis identified age, weight, heart rate, waist circumference, and height as key predictors of blood pressure. Across the 57 countries studied, model performances varied considerably, with accuracy ranging from as low as 58.96% in some models for specific countries to as high as 81.41% in others, underscoring the need for region and country-specific adaptations in modelling approaches. The explainable model offers an opportunity for population-level screening and continuous risk assessment in resource-limited settings.

要应对全球非传染性疾病(NCDs)发病率的不断上升,就必须改善对高血压的管理。因此,本研究旨在利用非传染性疾病风险因素监测 STEPwise 方法(STEPS)调查的数据,开发一种可解释的机器学习模型,用于预测高血压这一关键的非传染性疾病风险因素。该研究从世界卫生组织(WHO)六个地区的 57 个国家获得了具有国家代表性的 18-69 岁成人样本。对数据进行了统一和处理,以实现所选预测因素的标准化和国家间特征的同步化,从而产生了 41 个变量,包括人口、行为、身体和生化因素。在全球、地区和国家层面,采用 80/20 的训练-测试比例,对逻辑回归、k-近邻、随机森林、XGBoost 和全连接神经网络等五种机器学习模型进行了训练和评估。使用准确率、精确度、召回率和 F1 分数来评估模型的性能。特征重要性分析确定年龄、体重、心率、腰围和身高是预测血压的关键因素。在所研究的 57 个国家中,模型的性能差异很大,某些国家的模型准确率低至 58.96%,而另一些国家的准确率则高达 81.41%。可解释模型为在资源有限的环境中进行人群筛查和持续风险评估提供了机会。
{"title":"Predicting high blood pressure using machine learning models in low- and middle-income countries.","authors":"Ekaba Bisong, Noor Jibril, Preethi Premnath, Elsy Buligwa, George Oboh, Adanna Chukwuma","doi":"10.1186/s12911-024-02634-9","DOIUrl":"10.1186/s12911-024-02634-9","url":null,"abstract":"<p><p>Responding to the rising global prevalence of noncommunicable diseases (NCDs) requires improvements in the management of high blood pressure. Therefore, this study aims to develop an explainable machine learning model for predicting high blood pressure, a key NCD risk factor, using data from the STEPwise approach to NCD risk factor surveillance (STEPS) surveys. Nationally representative samples of adults aged 18-69 years were acquired from 57 countries spanning six World Health Organization (WHO) regions. Data harmonization and processing were performed to standardize the selected predictors and synchronize features across countries, yielding 41 variables, including demographic, behavioural, physical, and biochemical factors. Five machine learning models - logistic regression, k-nearest neighbours, random forest, XGBoost, and a fully connected neural network - were trained and evaluated at global, regional, and country-specific levels using an 80/20 train-test split. The models' performance was assessed using accuracy, precision, recall, and F1 score. Feature importance analysis identified age, weight, heart rate, waist circumference, and height as key predictors of blood pressure. Across the 57 countries studied, model performances varied considerably, with accuracy ranging from as low as 58.96% in some models for specific countries to as high as 81.41% in others, underscoring the need for region and country-specific adaptations in modelling approaches. The explainable model offers an opportunity for population-level screening and continuous risk assessment in resource-limited settings.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11342471/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142046402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rehab-AMD: co-design of an application for visual rehabilitation and monitoring of Age-related Macular Degeneration. Rehab-AMD:共同设计老年黄斑变性视觉康复和监测应用程序。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-23 DOI: 10.1186/s12911-024-02625-w
Guadalupe González-Montero, María Guijarro Mata-García, Carlos Moreno Martínez, Joaquín Recas Piorno

Background: The increasing demand for remote medical care, driven by digital healthcare advancements and the COVID-19 pandemic, necessitates effective solutions tailored to patients and healthcare practitioners. Co-design, involving collaboration between software developers, patients, and healthcare practitioners, prioritizes end-user needs. Research indicates that integrating patient perspectives enhances user experience and usability. However, its application in healthcare has been limited to small projects. This work focuses on co-designing a technological solution to enhance the monitoring and visual rehabilitation of individuals with Age-Related Macular Degeneration (AMD), a condition that significantly impacts the quality of life in people over 60. Current vision rehabilitation systems lack personalization, motivation, and effective progress monitoring. Involving patients and healthcare practitioners in the design process aims to ensure the final product meets their needs.

Methods: The project employs iterative and collaborative principles, involving a vision rehabilitation expert and two AMD patients as active users in the application's development and validation. The process begins by establishing requirements for user accounts and rehabilitation exercises. It continues with an initial approach extended through user validation. Co-design is facilitated by specific workshops marking each project iteration, totaling four workshops, along with continuous communication sessions between experts and developers to validate design decisions. Initial requirements gathering and constant feedback from end-users, the visual rehabilitator, and patients are crucial for refining the product effectively.

Results: The workshops produced a prototype featuring a test to monitor changes and progression and 15 visual rehabilitation exercises. Numerous patient and vision rehabilitation-driven software modifications led to a final design that is responsive and adaptive to end-user needs.

Conclusions: The Rehab-AMD pilot project aims to develop a collaborative and adaptive software solution for AMD rehabilitation by actively involving stakeholders and applying iterative design principles. Co-design in the Rehab-AMD solution proves to be a methodology that identifies usability issues and needs from the initial design stages. This approach ensures that software developers create a final product that is genuinely useful and manageable for people with AMD and the targeted vision rehabilitators.

背景:在数字医疗进步和 COVID-19 大流行的推动下,远程医疗的需求日益增长,这就需要为患者和医疗从业人员量身定制有效的解决方案。协同设计涉及软件开发人员、患者和医疗从业人员之间的合作,优先考虑最终用户的需求。研究表明,整合患者的观点可增强用户体验和可用性。然而,其在医疗保健领域的应用仅限于小型项目。这项工作的重点是共同设计一种技术解决方案,以加强对老年性黄斑变性(AMD)患者的监测和视觉康复,这种疾病严重影响了 60 岁以上人群的生活质量。目前的视力康复系统缺乏个性化、动力和有效的进展监测。让患者和医护人员参与设计过程,旨在确保最终产品满足他们的需求:方法:该项目采用迭代和协作原则,让视力康复专家和两名老年痴呆症患者作为积极用户参与应用程序的开发和验证。整个过程从建立用户账户和康复练习的要求开始。接着,通过用户验证来扩展初始方法。协同设计通过每次项目迭代的特定研讨会(共四次研讨会)以及专家和开发人员之间的持续沟通会议来促进,以验证设计决策。最初的需求收集以及来自最终用户、视觉康复师和患者的持续反馈对于有效改进产品至关重要:研讨会产生了一个原型,其中包括一个用于监测变化和进展的测试以及 15 个视觉康复练习。由患者和视力康复人员对软件进行了大量修改,最终设计出了能够满足和适应最终用户需求的产品:Rehab-AMD试点项目旨在通过让利益相关者积极参与并应用迭代设计原则,为AMD康复开发一种协作性和适应性软件解决方案。事实证明,Rehab-AMD 解决方案中的协同设计是一种从初始设计阶段就能识别可用性问题和需求的方法。这种方法可确保软件开发人员开发出对老年痴呆症患者和目标视力康复者真正有用且易于管理的最终产品。
{"title":"Rehab-AMD: co-design of an application for visual rehabilitation and monitoring of Age-related Macular Degeneration.","authors":"Guadalupe González-Montero, María Guijarro Mata-García, Carlos Moreno Martínez, Joaquín Recas Piorno","doi":"10.1186/s12911-024-02625-w","DOIUrl":"10.1186/s12911-024-02625-w","url":null,"abstract":"<p><strong>Background: </strong>The increasing demand for remote medical care, driven by digital healthcare advancements and the COVID-19 pandemic, necessitates effective solutions tailored to patients and healthcare practitioners. Co-design, involving collaboration between software developers, patients, and healthcare practitioners, prioritizes end-user needs. Research indicates that integrating patient perspectives enhances user experience and usability. However, its application in healthcare has been limited to small projects. This work focuses on co-designing a technological solution to enhance the monitoring and visual rehabilitation of individuals with Age-Related Macular Degeneration (AMD), a condition that significantly impacts the quality of life in people over 60. Current vision rehabilitation systems lack personalization, motivation, and effective progress monitoring. Involving patients and healthcare practitioners in the design process aims to ensure the final product meets their needs.</p><p><strong>Methods: </strong>The project employs iterative and collaborative principles, involving a vision rehabilitation expert and two AMD patients as active users in the application's development and validation. The process begins by establishing requirements for user accounts and rehabilitation exercises. It continues with an initial approach extended through user validation. Co-design is facilitated by specific workshops marking each project iteration, totaling four workshops, along with continuous communication sessions between experts and developers to validate design decisions. Initial requirements gathering and constant feedback from end-users, the visual rehabilitator, and patients are crucial for refining the product effectively.</p><p><strong>Results: </strong>The workshops produced a prototype featuring a test to monitor changes and progression and 15 visual rehabilitation exercises. Numerous patient and vision rehabilitation-driven software modifications led to a final design that is responsive and adaptive to end-user needs.</p><p><strong>Conclusions: </strong>The Rehab-AMD pilot project aims to develop a collaborative and adaptive software solution for AMD rehabilitation by actively involving stakeholders and applying iterative design principles. Co-design in the Rehab-AMD solution proves to be a methodology that identifies usability issues and needs from the initial design stages. This approach ensures that software developers create a final product that is genuinely useful and manageable for people with AMD and the targeted vision rehabilitators.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11342643/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142046403","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prediction of midpalatal suture maturation stage based on transfer learning and enhanced vision transformer. 基于迁移学习和增强视觉转换器的腭中缝成熟阶段预测。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-22 DOI: 10.1186/s12911-024-02598-w
Haomin Tang, Shu Liu, Weijie Tan, Lingling Fu, Ming Yan, Hongchao Feng

Background: Maxillary expansion is an important treatment method for maxillary transverse hypoplasia. Different methods of maxillary expansion should be carried out depending on the midpalatal suture maturation levels, and the diagnosis was validated by palatal plane cone beam computed tomography (CBCT) images by orthodontists, while such a method suffered from low efficiency and strong subjectivity. This study develops and evaluates an enhanced vision transformer (ViT) to automatically classify CBCT images of midpalatal sutures with different maturation stages.

Methods: In recent years, the use of convolutional neural network (CNN) to classify images of midpalatal suture with different maturation stages has brought positive significance to the decision of the clinical maxillary expansion method. However, CNN cannot adequately learn the long-distance dependencies between images and features, which are also required for global recognition of midpalatal suture CBCT images. The Self-Attention of ViT has the function of capturing the relationship between long-distance pixels of the image. However, it lacks the inductive bias of CNN and needs more data training. To solve this problem, a CNN-enhanced ViT model based on transfer learning is proposed to classify midpalatal suture CBCT images. In this study, 2518 CBCT images of the palate plane are collected, and the images are divided into 1259 images as the training set, 506 images as the verification set, and 753 images as the test set. After the training set image preprocessing, the CNN-enhanced ViT model is trained and adjusted, and the generalization ability of the model is tested on the test set.

Results: The classification accuracy of our proposed ViT model is 95.75%, and its Macro-averaging Area under the receiver operating characteristic Curve (AUC) and Micro-averaging AUC are 97.89% and 98.36% respectively on our data test set. The classification accuracy of the best performing CNN model EfficientnetV2_S was 93.76% on our data test set. The classification accuracy of the clinician is 89.10% on our data test set.

Conclusions: The experimental results show that this method can effectively complete CBCT images classification of midpalatal suture maturation stages, and the performance is better than a clinician. Therefore, the model can provide a valuable reference for orthodontists and assist them in making correct a diagnosis.

背景:上颌骨扩容是上颌骨横发育不良的重要治疗方法。根据腭中缝成熟度的不同,应采用不同的上颌扩弓方法,正畸医生通过腭平面锥形束计算机断层扫描(CBCT)图像进行诊断验证,但这种方法存在效率低、主观性强等问题。本研究开发并评估了一种增强型视觉变换器(ViT),用于自动对不同成熟阶段的腭中缝 CBCT 图像进行分类:近年来,利用卷积神经网络(CNN)对不同成熟阶段的腭中缝图像进行分类,为临床上颌扩容方法的决策带来了积极意义。然而,CNN 无法充分学习图像和特征之间的长距离依赖关系,而这也是对腭中缝 CBCT 图像进行全局识别所必需的。ViT 的 "自注意 "具有捕捉图像长距离像素间关系的功能。然而,它缺乏 CNN 的归纳偏差,需要更多的数据训练。为解决这一问题,本文提出了一种基于迁移学习的 CNN 增强 ViT 模型,用于对腭中缝 CBCT 图像进行分类。本研究收集了 2518 张腭平面 CBCT 图像,并将图像分为 1259 张作为训练集,506 张作为验证集,753 张作为测试集。对训练集图像进行预处理后,对 CNN 增强的 ViT 模型进行训练和调整,并在测试集上测试模型的泛化能力:我们提出的 ViT 模型的分类准确率为 95.75%,在数据测试集上的接收器工作特征曲线下的宏观平均面积(AUC)和微观平均面积(AUC)分别为 97.89% 和 98.36%。在我们的数据测试集上,表现最好的 CNN 模型 EfficientnetV2_S 的分类准确率为 93.76%。在我们的数据测试集上,临床医生的分类准确率为 89.10%:实验结果表明,该方法可以有效地完成腭中缝成熟阶段的 CBCT 图像分类,且性能优于临床医生。因此,该模型可以为口腔正畸医生提供有价值的参考,帮助他们做出正确的诊断。
{"title":"Prediction of midpalatal suture maturation stage based on transfer learning and enhanced vision transformer.","authors":"Haomin Tang, Shu Liu, Weijie Tan, Lingling Fu, Ming Yan, Hongchao Feng","doi":"10.1186/s12911-024-02598-w","DOIUrl":"10.1186/s12911-024-02598-w","url":null,"abstract":"<p><strong>Background: </strong>Maxillary expansion is an important treatment method for maxillary transverse hypoplasia. Different methods of maxillary expansion should be carried out depending on the midpalatal suture maturation levels, and the diagnosis was validated by palatal plane cone beam computed tomography (CBCT) images by orthodontists, while such a method suffered from low efficiency and strong subjectivity. This study develops and evaluates an enhanced vision transformer (ViT) to automatically classify CBCT images of midpalatal sutures with different maturation stages.</p><p><strong>Methods: </strong>In recent years, the use of convolutional neural network (CNN) to classify images of midpalatal suture with different maturation stages has brought positive significance to the decision of the clinical maxillary expansion method. However, CNN cannot adequately learn the long-distance dependencies between images and features, which are also required for global recognition of midpalatal suture CBCT images. The Self-Attention of ViT has the function of capturing the relationship between long-distance pixels of the image. However, it lacks the inductive bias of CNN and needs more data training. To solve this problem, a CNN-enhanced ViT model based on transfer learning is proposed to classify midpalatal suture CBCT images. In this study, 2518 CBCT images of the palate plane are collected, and the images are divided into 1259 images as the training set, 506 images as the verification set, and 753 images as the test set. After the training set image preprocessing, the CNN-enhanced ViT model is trained and adjusted, and the generalization ability of the model is tested on the test set.</p><p><strong>Results: </strong>The classification accuracy of our proposed ViT model is 95.75%, and its Macro-averaging Area under the receiver operating characteristic Curve (AUC) and Micro-averaging AUC are 97.89% and 98.36% respectively on our data test set. The classification accuracy of the best performing CNN model EfficientnetV2_S was 93.76% on our data test set. The classification accuracy of the clinician is 89.10% on our data test set.</p><p><strong>Conclusions: </strong>The experimental results show that this method can effectively complete CBCT images classification of midpalatal suture maturation stages, and the performance is better than a clinician. Therefore, the model can provide a valuable reference for orthodontists and assist them in making correct a diagnosis.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11340164/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142035324","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Usability evaluation of electronic health records at the trauma and emergency directorates at the Komfo Anokye teaching hospital in the Ashanti region of Ghana. 加纳阿散蒂地区 Komfo Anokye 教学医院创伤和急诊科电子病历的可用性评估。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-21 DOI: 10.1186/s12911-024-02636-7
Edith Antor, Joseph Owusu-Marfo, Jonathan Kissi

Background: Electronic health records (EHRs) are currently gaining popularity in emerging economies because they provide options for exchanging patient data, increasing operational efficiency, and improving patient outcomes. This study examines how service providers at Ghana's Komfo Anokye Teaching Hospital adopt and use an electronic health records (EHRs) system. The emphasis is on identifying factors impacting adoption and the problems that healthcare personnel encounter in efficiently using the EHRs system.

Method: A quantitative cross-sectional technique was utilised to collect data from 234 trauma and emergency department staff members via standardised questionnaires. The participants were selected using the purposive sampling method. The Pearson Chi-square Test was used to examine the relationship between respondents' acceptability and use of EHRs.

Results: The study discovered that a sizable number of respondents (86.8%) embraced and actively used the EHRs system. However, other issues were noted, including insufficient system training and malfunctions (35.9%), power outages (18.8%), privacy concerns (9.4%), and insufficient maintenance (4.7%). The respondents' comfortability in using the electronic health record system (X2=11.30, p=0.001), system dependability (X2=30.74, p=0.0001), and EHR's ability to reduce patient waiting time (X2=14.39, p=0.0001) were all strongly associated with their degree of satisfaction with the system. Furthermore, respondents who said elects increase patient care (X2= 75.59, p = 0.0001) and income creation (X2= 8.48, p = 0.004), which is related to the acceptability of the electronic health records system.

Conclusion: The study revealed that comfort, reliability, and improved care quality all had an impact on the EHRs system's acceptability and utilization. Challenges, including equipment malfunctions and power outages, were found. Continuous professional training was emphasized as a means of increasing employee confidence, as did the construction of a power backup system to combat disruptions. Patient data privacy was highlighted. In conclusion, this study highlights the relevance of EHRs system adoption and usability in healthcare. While the benefits are obvious, addressing obstacles through training, technical support, and infrastructure improvements is critical for increasing system effectiveness.

背景:电子病历(EHR)目前在新兴经济体中越来越受欢迎,因为它提供了交换病人数据、提高运营效率和改善病人治疗效果的选择。本研究探讨了加纳 Komfo Anokye 教学医院的服务提供商如何采用和使用电子病历系统。重点是确定影响采用的因素以及医护人员在有效使用电子病历系统时遇到的问题:采用定量横断面技术,通过标准化问卷向 234 名创伤和急诊科工作人员收集数据。采用有目的的抽样方法选取参与者。采用皮尔逊卡方检验法检验受访者对电子病历的接受程度和使用情况之间的关系:研究发现,相当多的受访者(86.8%)接受并积极使用电子病历系统。但也发现了其他问题,包括系统培训不足和故障(35.9%)、停电(18.8%)、隐私问题(9.4%)以及维护不足(4.7%)。受访者使用电子病历系统的舒适度(X2=11.30,p=0.001)、系统的可靠性(X2=30.74,p=0.0001)和电子病历减少病人等待时间的能力(X2=14.39,p=0.0001)都与他们对系统的满意度密切相关。此外,受访者认为电子病历能增加患者护理(X2= 75.59,p=0.0001)和创造收入(X2= 8.48,p=0.004),这与电子病历系统的可接受性有关:研究表明,舒适度、可靠性和护理质量的提高都对电子病历系统的可接受性和使用率有影响。但也发现了一些挑战,包括设备故障和停电。研究强调,持续的专业培训是增强员工信心的一种手段,建立备用电源系统以应对停电也是如此。研究还强调了患者数据隐私。总之,本研究强调了电子病历系统的采用和可用性与医疗保健的相关性。虽然好处显而易见,但通过培训、技术支持和基础设施改善来解决障碍对于提高系统效率至关重要。
{"title":"Usability evaluation of electronic health records at the trauma and emergency directorates at the Komfo Anokye teaching hospital in the Ashanti region of Ghana.","authors":"Edith Antor, Joseph Owusu-Marfo, Jonathan Kissi","doi":"10.1186/s12911-024-02636-7","DOIUrl":"10.1186/s12911-024-02636-7","url":null,"abstract":"<p><strong>Background: </strong>Electronic health records (EHRs) are currently gaining popularity in emerging economies because they provide options for exchanging patient data, increasing operational efficiency, and improving patient outcomes. This study examines how service providers at Ghana's Komfo Anokye Teaching Hospital adopt and use an electronic health records (EHRs) system. The emphasis is on identifying factors impacting adoption and the problems that healthcare personnel encounter in efficiently using the EHRs system.</p><p><strong>Method: </strong>A quantitative cross-sectional technique was utilised to collect data from 234 trauma and emergency department staff members via standardised questionnaires. The participants were selected using the purposive sampling method. The Pearson Chi-square Test was used to examine the relationship between respondents' acceptability and use of EHRs.</p><p><strong>Results: </strong>The study discovered that a sizable number of respondents (86.8%) embraced and actively used the EHRs system. However, other issues were noted, including insufficient system training and malfunctions (35.9%), power outages (18.8%), privacy concerns (9.4%), and insufficient maintenance (4.7%). The respondents' comfortability in using the electronic health record system (X<sup>2</sup>=11.30, p=0.001), system dependability (X<sup>2</sup>=30.74, p=0.0001), and EHR's ability to reduce patient waiting time (X<sup>2</sup>=14.39, p=0.0001) were all strongly associated with their degree of satisfaction with the system. Furthermore, respondents who said elects increase patient care (X<sup>2</sup>= 75.59, p = 0.0001) and income creation (X<sup>2</sup>= 8.48, p = 0.004), which is related to the acceptability of the electronic health records system.</p><p><strong>Conclusion: </strong>The study revealed that comfort, reliability, and improved care quality all had an impact on the EHRs system's acceptability and utilization. Challenges, including equipment malfunctions and power outages, were found. Continuous professional training was emphasized as a means of increasing employee confidence, as did the construction of a power backup system to combat disruptions. Patient data privacy was highlighted. In conclusion, this study highlights the relevance of EHRs system adoption and usability in healthcare. While the benefits are obvious, addressing obstacles through training, technical support, and infrastructure improvements is critical for increasing system effectiveness.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11340109/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142016457","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction: Creating a health informatics data resource for hearing health research. 更正:为听力健康研究创建健康信息学数据资源。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-19 DOI: 10.1186/s12911-024-02632-x
Nishchay Mehta, Baptiste Briot Ribeyre, Lilia Dimitrov, Louise J English, Colleen Ewart, Antje Heinrich, Nikhil Joshi, Kevin J Munro, Gail Roadknight, Luis Romao, Anne Gm Schilder, Ruth V Spriggs, Ruth Norris, Talisa Ross, George Tilston
{"title":"Correction: Creating a health informatics data resource for hearing health research.","authors":"Nishchay Mehta, Baptiste Briot Ribeyre, Lilia Dimitrov, Louise J English, Colleen Ewart, Antje Heinrich, Nikhil Joshi, Kevin J Munro, Gail Roadknight, Luis Romao, Anne Gm Schilder, Ruth V Spriggs, Ruth Norris, Talisa Ross, George Tilston","doi":"10.1186/s12911-024-02632-x","DOIUrl":"10.1186/s12911-024-02632-x","url":null,"abstract":"","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11334565/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142003681","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Machine learning model predicts airway stenosis requiring clinical intervention in patients after lung transplantation: a retrospective case-controlled study. 机器学习模型预测肺移植术后患者需要临床干预的气道狭窄:一项回顾性病例对照研究。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-19 DOI: 10.1186/s12911-024-02635-8
Dong Tian, Yu-Jie Zuo, Hao-Ji Yan, Heng Huang, Ming-Zhao Liu, Hang Yang, Jin Zhao, Ling-Zhi Shi, Jing-Yu Chen

Background: Patients with airway stenosis (AS) are associated with considerable morbidity and mortality after lung transplantation (LTx). This study aims to develop and validate machine learning (ML) models to predict AS requiring clinical intervention in patients after LTx.

Methods: Patients who underwent LTx between January 2017 and December 2019 were reviewed. The conventional logistic regression (LR) model was fitted by the independent risk factors which were determined by multivariate LR. The optimal ML model was determined based on 7 feature selection methods and 8 ML algorithms. Model performance was assessed by the area under the curve (AUC) and brier score, which were internally validated by the bootstrap method.

Results: A total of 381 LTx patients were included, and 40 (10.5%) patients developed AS. Multivariate analysis indicated that male, pulmonary arterial hypertension, and postoperative 6-min walking test were significantly associated with AS (all P < 0.001). The conventional LR model showed performance with an AUC of 0.689 and brier score of 0.091. In total, 56 ML models were developed and the optimal ML model was the model fitted using a random forest algorithm with a determination coefficient feature selection method. The optimal model exhibited the highest AUC and brier score values of 0.760 (95% confidence interval [CI], 0.666-0.864) and 0.085 (95% CI, 0.058-0.117) among all ML models, which was superior to the conventional LR model.

Conclusions: The optimal ML model, which was developed by clinical characteristics, allows for the satisfactory prediction of AS in patients after LTx.

背景:肺移植(LTx)后,气道狭窄(AS)患者的发病率和死亡率相当高。本研究旨在开发和验证机器学习(ML)模型,以预测LTx术后需要临床干预的气道狭窄患者:对2017年1月至2019年12月期间接受LTx的患者进行了回顾。通过多变量 LR 确定的独立风险因素拟合了传统的逻辑回归(LR)模型。根据 7 种特征选择方法和 8 种 ML 算法确定了最佳 ML 模型。通过曲线下面积(AUC)和布赖尔评分评估模型性能,并通过引导法进行内部验证:结果:共纳入了 381 例 LTx 患者,其中 40 例(10.5%)发展为 AS。多变量分析表明,男性、肺动脉高压和术后 6 分钟步行测试与强直性脊柱炎显著相关(均为 P):根据临床特征建立的最佳 ML 模型可以令人满意地预测 LTx 术后患者的 AS。
{"title":"Machine learning model predicts airway stenosis requiring clinical intervention in patients after lung transplantation: a retrospective case-controlled study.","authors":"Dong Tian, Yu-Jie Zuo, Hao-Ji Yan, Heng Huang, Ming-Zhao Liu, Hang Yang, Jin Zhao, Ling-Zhi Shi, Jing-Yu Chen","doi":"10.1186/s12911-024-02635-8","DOIUrl":"10.1186/s12911-024-02635-8","url":null,"abstract":"<p><strong>Background: </strong>Patients with airway stenosis (AS) are associated with considerable morbidity and mortality after lung transplantation (LTx). This study aims to develop and validate machine learning (ML) models to predict AS requiring clinical intervention in patients after LTx.</p><p><strong>Methods: </strong>Patients who underwent LTx between January 2017 and December 2019 were reviewed. The conventional logistic regression (LR) model was fitted by the independent risk factors which were determined by multivariate LR. The optimal ML model was determined based on 7 feature selection methods and 8 ML algorithms. Model performance was assessed by the area under the curve (AUC) and brier score, which were internally validated by the bootstrap method.</p><p><strong>Results: </strong>A total of 381 LTx patients were included, and 40 (10.5%) patients developed AS. Multivariate analysis indicated that male, pulmonary arterial hypertension, and postoperative 6-min walking test were significantly associated with AS (all P < 0.001). The conventional LR model showed performance with an AUC of 0.689 and brier score of 0.091. In total, 56 ML models were developed and the optimal ML model was the model fitted using a random forest algorithm with a determination coefficient feature selection method. The optimal model exhibited the highest AUC and brier score values of 0.760 (95% confidence interval [CI], 0.666-0.864) and 0.085 (95% CI, 0.058-0.117) among all ML models, which was superior to the conventional LR model.</p><p><strong>Conclusions: </strong>The optimal ML model, which was developed by clinical characteristics, allows for the satisfactory prediction of AS in patients after LTx.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11331769/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142003682","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prediction of sepsis mortality in ICU patients using machine learning methods. 利用机器学习方法预测重症监护室患者的败血症死亡率。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-16 DOI: 10.1186/s12911-024-02630-z
Jiayi Gao, Yuying Lu, Negin Ashrafi, Ian Domingo, Kamiar Alaei, Maryam Pishgar

Problem: Sepsis, a life-threatening condition, accounts for the deaths of millions of people worldwide. Accurate prediction of sepsis outcomes is crucial for effective treatment and management. Previous studies have utilized machine learning for prognosis, but have limitations in feature sets and model interpretability.

Aim: This study aims to develop a machine learning model that enhances prediction accuracy for sepsis outcomes using a reduced set of features, thereby addressing the limitations of previous studies and enhancing model interpretability.

Methods: This study analyzes intensive care patient outcomes using the MIMIC-IV database, focusing on adult sepsis cases. Employing the latest data extraction tools, such as Google BigQuery, and following stringent selection criteria, we selected 38 features in this study. This selection is also informed by a comprehensive literature review and clinical expertise. Data preprocessing included handling missing values, regrouping categorical variables, and using the Synthetic Minority Over-sampling Technique (SMOTE) to balance the data. We evaluated several machine learning models: Decision Trees, Gradient Boosting, XGBoost, LightGBM, Multilayer Perceptrons (MLP), Support Vector Machines (SVM), and Random Forest. The Sequential Halving and Classification (SHAC) algorithm was used for hyperparameter tuning, and both train-test split and cross-validation methodologies were employed for performance and computational efficiency.

Results: The Random Forest model was the most effective, achieving an area under the receiver operating characteristic curve (AUROC) of 0.94 with a confidence interval of ±0.01. This significantly outperformed other models and set a new benchmark in the literature. The model also provided detailed insights into the importance of various clinical features, with the Sequential Organ Failure Assessment (SOFA) score and average urine output being highly predictive. SHAP (Shapley Additive Explanations) analysis further enhanced the model's interpretability, offering a clearer understanding of feature impacts.

Conclusion: This study demonstrates significant improvements in predicting sepsis outcomes using a Random Forest model, supported by advanced machine learning techniques and thorough data preprocessing. Our approach provided detailed insights into the key clinical features impacting sepsis mortality, making the model both highly accurate and interpretable. By enhancing the model's practical utility in clinical settings, we offer a valuable tool for healthcare professionals to make data-driven decisions, ultimately aiming to minimize sepsis-induced fatalities.

问题:败血症是一种危及生命的疾病,在全球造成数百万人死亡。准确预测败血症的预后对有效治疗和管理至关重要。目的:本研究旨在开发一种机器学习模型,利用减少的特征集提高败血症预后预测的准确性,从而解决以往研究的局限性并提高模型的可解释性:本研究利用 MIMIC-IV 数据库分析了重症监护患者的预后,重点关注成人败血症病例。我们采用了谷歌 BigQuery 等最新的数据提取工具,并遵循严格的选择标准,在本研究中选择了 38 个特征。这一选择还参考了全面的文献综述和临床专业知识。数据预处理包括处理缺失值、对分类变量重新分组,以及使用合成少数群体过度抽样技术(SMOTE)来平衡数据。我们评估了几种机器学习模型:决策树、梯度提升、XGBoost、LightGBM、多层感知器(MLP)、支持向量机(SVM)和随机森林。在超参数调整中使用了序列减半和分类(SHAC)算法,在性能和计算效率方面使用了训练-测试分割和交叉验证方法:随机森林模型是最有效的模型,其接收者工作特征曲线下面积(AUROC)为 0.94,置信区间为 ±0.01。这明显优于其他模型,为文献设定了新的基准。该模型还详细揭示了各种临床特征的重要性,其中序贯器官衰竭评估(SOFA)评分和平均尿量具有很高的预测性。SHAP(夏普利相加解释)分析进一步增强了模型的可解释性,使人们更清楚地了解特征的影响:本研究表明,在先进的机器学习技术和全面的数据预处理支持下,使用随机森林模型预测败血症结果的效果显著提高。我们的方法详细揭示了影响败血症死亡率的关键临床特征,使模型既高度准确又易于解释。通过提高该模型在临床环境中的实用性,我们为医疗保健专业人员提供了一个宝贵的工具,使他们能够以数据为导向做出决策,最终最大限度地减少败血症引起的死亡。
{"title":"Prediction of sepsis mortality in ICU patients using machine learning methods.","authors":"Jiayi Gao, Yuying Lu, Negin Ashrafi, Ian Domingo, Kamiar Alaei, Maryam Pishgar","doi":"10.1186/s12911-024-02630-z","DOIUrl":"10.1186/s12911-024-02630-z","url":null,"abstract":"<p><strong>Problem: </strong>Sepsis, a life-threatening condition, accounts for the deaths of millions of people worldwide. Accurate prediction of sepsis outcomes is crucial for effective treatment and management. Previous studies have utilized machine learning for prognosis, but have limitations in feature sets and model interpretability.</p><p><strong>Aim: </strong>This study aims to develop a machine learning model that enhances prediction accuracy for sepsis outcomes using a reduced set of features, thereby addressing the limitations of previous studies and enhancing model interpretability.</p><p><strong>Methods: </strong>This study analyzes intensive care patient outcomes using the MIMIC-IV database, focusing on adult sepsis cases. Employing the latest data extraction tools, such as Google BigQuery, and following stringent selection criteria, we selected 38 features in this study. This selection is also informed by a comprehensive literature review and clinical expertise. Data preprocessing included handling missing values, regrouping categorical variables, and using the Synthetic Minority Over-sampling Technique (SMOTE) to balance the data. We evaluated several machine learning models: Decision Trees, Gradient Boosting, XGBoost, LightGBM, Multilayer Perceptrons (MLP), Support Vector Machines (SVM), and Random Forest. The Sequential Halving and Classification (SHAC) algorithm was used for hyperparameter tuning, and both train-test split and cross-validation methodologies were employed for performance and computational efficiency.</p><p><strong>Results: </strong>The Random Forest model was the most effective, achieving an area under the receiver operating characteristic curve (AUROC) of 0.94 with a confidence interval of ±0.01. This significantly outperformed other models and set a new benchmark in the literature. The model also provided detailed insights into the importance of various clinical features, with the Sequential Organ Failure Assessment (SOFA) score and average urine output being highly predictive. SHAP (Shapley Additive Explanations) analysis further enhanced the model's interpretability, offering a clearer understanding of feature impacts.</p><p><strong>Conclusion: </strong>This study demonstrates significant improvements in predicting sepsis outcomes using a Random Forest model, supported by advanced machine learning techniques and thorough data preprocessing. Our approach provided detailed insights into the key clinical features impacting sepsis mortality, making the model both highly accurate and interpretable. By enhancing the model's practical utility in clinical settings, we offer a valuable tool for healthcare professionals to make data-driven decisions, ultimately aiming to minimize sepsis-induced fatalities.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11328468/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141995395","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Patient profiled data for treatment decision-making: valuable as an add-on to hepatitis C clinical guidelines? 用于治疗决策的患者特征数据:作为丙型肝炎临床指南的附加内容是否有价值?
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-13 DOI: 10.1186/s12911-024-02608-x
Sylvia M Brakenhoff, Thymen Theijse, Peter van Wijngaarden, Christian Trautwein, Jonathan F Brozat, Frank Tacke, Pieter Honkoop, Thomas Vanwolleghem, Dirk Posthouwer, Stefan Zeuzem, Ulrike Mihm, Heiner Wedemeyer, Thomas Berg, Solko W Schalm, Robert J de Knegt

Background and aims: Systematic reviews and medical guidelines are widely used in clinical practice. However, these are often not up-to-date and focussed on the average patient. We therefore aimed to evaluate a guideline add-on, TherapySelector (TS), which is based on monthly updated data of all available high-quality studies, classified in specific patient profiles.

Methods: We evaluated the TS for the treatment of hepatitis C (HCV) in an international cohort of patients treated with direct-acting antivirals between 2015 and 2020. The primary outcome was the number of patients receiving one of the two preferred treatment options of the HCV TS, based on the highest level of evidence, cure rate, absence of ribavirin-associated adverse effects, and treatment duration.

Results: We enrolled 567 patients. The number of patients treated with one of the two preferred treatment options according to the HCV TS ranged between 27% (2015) and 60% (2020; p < 0.001). Most of the patients received a regimen with a longer treatment-duration (up to 34%) and/or addition of ribavirin (up to 14%). The effect on the expected cure-rate was minimal (1-6% higher) when the first preferred TherapySelector option was given compared to the actual treatment.

Conclusions: Medical decision-making can be optimised by a guideline add-on; in HCV its use appears to minimise adverse effects and cost. The use of such an add-on might have a greater impact in diseases with suboptimal cure-rates, high costs or adverse effects, for which treatment options rely on specific patient characteristics.

背景和目的:系统综述和医疗指南在临床实践中被广泛使用。然而,这些指南往往不是最新的,也不是针对普通患者的。因此,我们旨在对指南的附加功能--TherapySelector(TS)进行评估,该指南基于每月更新的所有可用高质量研究数据,并按特定患者情况进行分类:我们对 2015 年至 2020 年期间接受直接作用抗病毒药物治疗的国际患者队列中的丙型肝炎(HCV)治疗 TS 进行了评估。主要结果是接受 HCV TS 两种首选治疗方案之一的患者人数(基于最高证据级别)、治愈率、无利巴韦林相关不良反应和治疗持续时间:我们共招募了 567 名患者。结果:我们招募了 567 名患者,根据 HCV TS,接受两种首选治疗方案之一治疗的患者人数介于 27% (2015 年)和 60% (2020 年)之间:医疗决策可通过指南附加方案得到优化;在 HCV 中使用该附加方案似乎可将不良反应和成本降至最低。对于治愈率不理想、成本高或有不良反应的疾病,这种附加指南的使用可能会产生更大的影响,因为这些疾病的治疗方案取决于患者的具体特征。
{"title":"Patient profiled data for treatment decision-making: valuable as an add-on to hepatitis C clinical guidelines?","authors":"Sylvia M Brakenhoff, Thymen Theijse, Peter van Wijngaarden, Christian Trautwein, Jonathan F Brozat, Frank Tacke, Pieter Honkoop, Thomas Vanwolleghem, Dirk Posthouwer, Stefan Zeuzem, Ulrike Mihm, Heiner Wedemeyer, Thomas Berg, Solko W Schalm, Robert J de Knegt","doi":"10.1186/s12911-024-02608-x","DOIUrl":"10.1186/s12911-024-02608-x","url":null,"abstract":"<p><strong>Background and aims: </strong>Systematic reviews and medical guidelines are widely used in clinical practice. However, these are often not up-to-date and focussed on the average patient. We therefore aimed to evaluate a guideline add-on, TherapySelector (TS), which is based on monthly updated data of all available high-quality studies, classified in specific patient profiles.</p><p><strong>Methods: </strong>We evaluated the TS for the treatment of hepatitis C (HCV) in an international cohort of patients treated with direct-acting antivirals between 2015 and 2020. The primary outcome was the number of patients receiving one of the two preferred treatment options of the HCV TS, based on the highest level of evidence, cure rate, absence of ribavirin-associated adverse effects, and treatment duration.</p><p><strong>Results: </strong>We enrolled 567 patients. The number of patients treated with one of the two preferred treatment options according to the HCV TS ranged between 27% (2015) and 60% (2020; p < 0.001). Most of the patients received a regimen with a longer treatment-duration (up to 34%) and/or addition of ribavirin (up to 14%). The effect on the expected cure-rate was minimal (1-6% higher) when the first preferred TherapySelector option was given compared to the actual treatment.</p><p><strong>Conclusions: </strong>Medical decision-making can be optimised by a guideline add-on; in HCV its use appears to minimise adverse effects and cost. The use of such an add-on might have a greater impact in diseases with suboptimal cure-rates, high costs or adverse effects, for which treatment options rely on specific patient characteristics.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11321176/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141975122","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Community perspectives on the use of electronic health data to support reflective practice by health professionals 关于使用电子健康数据支持卫生专业人员反思性实践的社区观点
IF 3.5 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-12 DOI: 10.1186/s12911-024-02626-9
Anna Janssen, Kavisha Shah, Melanie Keep, Tim Shaw
Electronic health records and other clinical information systems have crucial roles in health service delivery and are often utilised for patient care as well as health promotion and research. Government agencies and healthcare bodies are gradually shifting the focus on how these data systems can be harnessed for secondary uses such as reflective practice, professional learning and continuing professional development. Whilst there has been a presence in research around the attitudes of health professionals in employing clinical information systems to support their reflective practice, there has been very little research into consumer attitudes towards these data systems and how they would like to interact with such structures. The study described in this article aimed to address this gap in the literature by exploring community perspectives on the secondary use of Electronic Health Data for health professional learning and practice reflection. A qualitative methodology was used, with data being collected via semi-structured interviews. Interviews were conducted via phone and audio recordings, before being transcribed into text for analysis. Reflective thematic analysis was undertaken to analyse the data. Fifteen Australians consented to participate in an interview. Analysis of interview data generated five themes: (1) Knowledge about health professional registration and professional learning; (2) Secondary uses of Electronic Health Data; (3) Factors that enable the use of Electronic Health Data for health professional learning; (4) Challenges using Electronic Health Data for health professional learning and (5) Expectations around consent to use Electronic Health Data for health professional learning. Australians are generally supportive of health professionals using Electronic Health Data to support reflective practice and learning but identify several challenges for data being used in this way.
电子健康记录和其他临床信息系统在提供医疗服务方面发挥着至关重要的作用,通常用于病人护理以及健康促进和研究。政府机构和医疗保健机构正逐渐将重点转移到如何利用这些数据系统进行二次利用,如反思性实践、专业学习和持续专业发展。虽然围绕医疗专业人员在使用临床信息系统支持其反思性实践方面的态度开展了大量研究,但有关消费者对这些数据系统的态度以及他们希望如何与这些系统互动的研究却很少。本文所述的研究旨在通过探讨社区对二次使用电子健康数据促进医疗专业人员学习和实践反思的看法,填补文献中的这一空白。研究采用定性方法,通过半结构化访谈收集数据。访谈通过电话和录音进行,然后转录成文本进行分析。对数据进行了反思性专题分析。15 名澳大利亚人同意参加访谈。对访谈数据的分析产生了五个主题:(1) 对健康专业人员注册和专业学习的了解;(2) 电子健康数据的二次使用;(3) 能够将电子健康数据用于健康专业学习的因素;(4) 将电子健康数据用于健康专业学习所面临的挑战;(5) 在同意将电子健康数据用于健康专业学习方面的期望。澳大利亚人普遍支持卫生专业人员使用电子健康数据支持反思性实践和学习,但也指出了以这种方式使用数据所面临的几项挑战。
{"title":"Community perspectives on the use of electronic health data to support reflective practice by health professionals","authors":"Anna Janssen, Kavisha Shah, Melanie Keep, Tim Shaw","doi":"10.1186/s12911-024-02626-9","DOIUrl":"https://doi.org/10.1186/s12911-024-02626-9","url":null,"abstract":"Electronic health records and other clinical information systems have crucial roles in health service delivery and are often utilised for patient care as well as health promotion and research. Government agencies and healthcare bodies are gradually shifting the focus on how these data systems can be harnessed for secondary uses such as reflective practice, professional learning and continuing professional development. Whilst there has been a presence in research around the attitudes of health professionals in employing clinical information systems to support their reflective practice, there has been very little research into consumer attitudes towards these data systems and how they would like to interact with such structures. The study described in this article aimed to address this gap in the literature by exploring community perspectives on the secondary use of Electronic Health Data for health professional learning and practice reflection. A qualitative methodology was used, with data being collected via semi-structured interviews. Interviews were conducted via phone and audio recordings, before being transcribed into text for analysis. Reflective thematic analysis was undertaken to analyse the data. Fifteen Australians consented to participate in an interview. Analysis of interview data generated five themes: (1) Knowledge about health professional registration and professional learning; (2) Secondary uses of Electronic Health Data; (3) Factors that enable the use of Electronic Health Data for health professional learning; (4) Challenges using Electronic Health Data for health professional learning and (5) Expectations around consent to use Electronic Health Data for health professional learning. Australians are generally supportive of health professionals using Electronic Health Data to support reflective practice and learning but identify several challenges for data being used in this way.","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141947063","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Prediction of 30-day mortality for ICU patients with Sepsis-3. ICU 败血症患者 30 天死亡率预测-3。
IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS Pub Date : 2024-08-08 DOI: 10.1186/s12911-024-02629-6
Zhijiang Yu, Negin Ashrafi, Hexin Li, Kamiar Alaei, Maryam Pishgar

Background: There is a growing demand for advanced methods to improve the understanding and prediction of illnesses. This study focuses on Sepsis, a critical response to infection, aiming to enhance early detection and mortality prediction for Sepsis-3 patients to improve hospital resource allocation.

Methods: In this study, we developed a Machine Learning (ML) framework to predict the 30-day mortality rate of ICU patients with Sepsis-3 using the MIMIC-III database. Advanced big data extraction tools like Snowflake were used to identify eligible patients. Decision tree models and Entropy Analyses helped refine feature selection, resulting in 30 relevant features curated with clinical experts. We employed the Light Gradient Boosting Machine (LightGBM) model for its efficiency and predictive power.

Results: The study comprised a cohort of 9118 Sepsis-3 patients. Our preprocessing techniques significantly improved both the AUC and accuracy metrics. The LightGBM model achieved an impressive AUC of 0.983 (95% CI: [0.980-0.990]), an accuracy of 0.966, and an F1-score of 0.910. Notably, LightGBM showed a substantial 6% improvement over our best baseline model and a 14% enhancement over the best existing literature. These advancements are attributed to (I) the inclusion of the novel and pivotal feature Hospital Length of Stay (HOSP_LOS), absent in previous studies, and (II) LightGBM's gradient boosting architecture, enabling robust predictions with high-dimensional data while maintaining computational efficiency, as demonstrated by its learning curve.

Conclusions: Our preprocessing methodology reduced the number of relevant features and identified a crucial feature overlooked in previous studies. The proposed model demonstrated high predictive power and generalization capability, highlighting the potential of ML in ICU settings. This model can streamline ICU resource allocation and provide tailored interventions for Sepsis-3 patients.

背景:人们越来越需要先进的方法来提高对疾病的理解和预测。本研究的重点是败血症,这是一种对感染的关键反应,旨在加强对败血症-3 患者的早期检测和死亡率预测,以改善医院的资源分配:在这项研究中,我们开发了一个机器学习(ML)框架,利用 MIMIC-III 数据库预测 ICU 败血症-3 患者的 30 天死亡率。我们使用雪花(Snowflake)等先进的大数据提取工具来识别符合条件的患者。决策树模型和熵分析帮助完善了特征选择,最终得出了由临床专家策划的 30 个相关特征。我们采用了光梯度提升机(LightGBM)模型,以提高其效率和预测能力:研究包括 9118 例败血症-3 患者。我们的预处理技术大大提高了AUC和准确率指标。LightGBM 模型的 AUC 为 0.983(95% CI:[0.980-0.990]),准确率为 0.966,F1 分数为 0.910。值得注意的是,LightGBM 比我们的最佳基线模型提高了 6%,比现有的最佳文献提高了 14%。这些进步归功于:(I)加入了新颖且关键的特征--住院时间(HOSP_LOS),而这在之前的研究中是没有的;(II)LightGBM 的梯度提升架构,在保持计算效率的同时,还能对高维数据进行稳健预测,这一点从其学习曲线中就能看出:我们的预处理方法减少了相关特征的数量,并发现了以往研究中忽略的一个关键特征。所提出的模型具有很高的预测能力和泛化能力,凸显了 ML 在 ICU 环境中的潜力。该模型可简化重症监护室的资源分配,并为败血症-3 患者提供量身定制的干预措施。
{"title":"Prediction of 30-day mortality for ICU patients with Sepsis-3.","authors":"Zhijiang Yu, Negin Ashrafi, Hexin Li, Kamiar Alaei, Maryam Pishgar","doi":"10.1186/s12911-024-02629-6","DOIUrl":"10.1186/s12911-024-02629-6","url":null,"abstract":"<p><strong>Background: </strong>There is a growing demand for advanced methods to improve the understanding and prediction of illnesses. This study focuses on Sepsis, a critical response to infection, aiming to enhance early detection and mortality prediction for Sepsis-3 patients to improve hospital resource allocation.</p><p><strong>Methods: </strong>In this study, we developed a Machine Learning (ML) framework to predict the 30-day mortality rate of ICU patients with Sepsis-3 using the MIMIC-III database. Advanced big data extraction tools like Snowflake were used to identify eligible patients. Decision tree models and Entropy Analyses helped refine feature selection, resulting in 30 relevant features curated with clinical experts. We employed the Light Gradient Boosting Machine (LightGBM) model for its efficiency and predictive power.</p><p><strong>Results: </strong>The study comprised a cohort of 9118 Sepsis-3 patients. Our preprocessing techniques significantly improved both the AUC and accuracy metrics. The LightGBM model achieved an impressive AUC of 0.983 (95% CI: [0.980-0.990]), an accuracy of 0.966, and an F1-score of 0.910. Notably, LightGBM showed a substantial 6% improvement over our best baseline model and a 14% enhancement over the best existing literature. These advancements are attributed to (I) the inclusion of the novel and pivotal feature Hospital Length of Stay (HOSP_LOS), absent in previous studies, and (II) LightGBM's gradient boosting architecture, enabling robust predictions with high-dimensional data while maintaining computational efficiency, as demonstrated by its learning curve.</p><p><strong>Conclusions: </strong>Our preprocessing methodology reduced the number of relevant features and identified a crucial feature overlooked in previous studies. The proposed model demonstrated high predictive power and generalization capability, highlighting the potential of ML in ICU settings. This model can streamline ICU resource allocation and provide tailored interventions for Sepsis-3 patients.</p>","PeriodicalId":9340,"journal":{"name":"BMC Medical Informatics and Decision Making","volume":null,"pages":null},"PeriodicalIF":3.3,"publicationDate":"2024-08-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11308624/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141905925","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
BMC Medical Informatics and Decision Making
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1