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Instant Diagnosis Using Raman Spectroscopy and Generative Adversarial Networks: A Blood-Based Study on Seasonal Flu, COVID-19, and Dengue.
Pub Date : 2025-04-01 DOI: 10.1002/jbio.70017
Rekha Puthenkaleekkal Thankappan, Dhanya Reghu, Dipak Kumbhar, Ashwin Kotnis, Rashmi Choudhary, Jitendra Singh, A Raj Kumar Patro, Sarman Singh, Dipankar Nandi, Siva Umapathy

Rapid detection of infectious diseases like COVID-19, flu, and dengue is crucial for healthcare professionals preparing for contagious outbreaks. Given the constant mutations in viruses and the recurring emergence of threats like Nipah and Zika, there is an urgent demand for a technology capable of distinguishing between infections that share similar symptoms. In this paper, we utilize laser-based Raman scattered signals from a drop of dried blood plasma, combined with generative artificial intelligence, to provide a rapid and precise diagnosis. Our optimized model exhibits exceptional performance, yielding high predictive scores of 96%, 98%, and 100% for flu, COVID-19, and dengue, respectively. The proposed Raman spectroscopic analysis, with a rapid turnaround time, can ensure a near-accurate diagnosis and proper quarantining of highly infectious cases. Furthermore, the potential extension of our method to include other viral diseases offers an alternative to the challenge of developing different diagnostic kits for each disease.

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引用次数: 0
Rapid Detection of SARS-CoV-2 in Clinical Samples Combining a Paper-Based Immunoassay With SERS-Based Read out and Machine Learning. 将纸质免疫测定与基于 SERS 的读出和机器学习相结合,快速检测临床样本中的 SARS-CoV-2
Pub Date : 2025-03-29 DOI: 10.1002/jbio.70018
Daojian Qi, Yan Wu, Wenbo Mo, Jiaxing Wen, Shuang Ni, Jinglin Huang, Wei Le, Yudan He, Jia Li, Minjie Zhou

While SERS-based detection can bring some advantages, it is far away from being established as a routine method in clinical diagnostics. In this study, a SERS-labeled immunochromatographic test paper was prepared. The rapid detection of SARS-CoV-2 was realized by the machine learning algorithm of the Raman probe; the whole testing process takes less than 25 min, and the rapid detection of SARS-CoV-2 can be realized. After experimental evaluation, the sensitivity of the test strip for SARS-CoV-2 N protein detection can be 1 pg/mL, which is 3 orders of magnitude higher than that of the colloidal gold antigen detection strip on the market. In the detection of clinical samples, nucleic acid detection was used as the gold standard, and the accuracy was 84.21%.

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引用次数: 0
Exploring the Use of Thermography for Monitoring Physiological Responses to Training in Division-I Collegiate Female Soccer Players.
Pub Date : 2025-03-25 DOI: 10.1002/jbio.70016
Casey J Metoyer, Jonathon R Lever, Valerie Smith-Hale, Cloe Klaus, Cara Ocobock, Alan Huebner, Megan McGinty, Jonathan D Hauenstein, John P Wagle

This study investigated the use of thermography as a non-invasive tool to monitor physiological responses to mechanical workload in Division-I female soccer players. A total of 29 student-athletes (age: 19.8 ± 1.1 years) participated, with thermographic imaging conducted throughout training across the competitive season. A total of 8106 observations were analyzed, revealing a weak but significant negative correlation between total player load (TPL) and changes in body region temperature (∆t) (βTPL = -0.00047; p < 0.0001). For every one unit increase in TPL, skin temperature decreased by 0.00047°C on average. Similar patterns were observed in high-minute players (βTPL = -0.0046; p < 0.0001) and when excluding goalkeepers (βTPL = -0.00027, p < 0.001). Interestingly, cooler temperatures were linked to higher workloads in field players, contrasting with previous research. These findings suggest thermography may reflect physiological responses to external workload, with position-specific demands requiring tailored metrics for accurate monitoring.

{"title":"Exploring the Use of Thermography for Monitoring Physiological Responses to Training in Division-I Collegiate Female Soccer Players.","authors":"Casey J Metoyer, Jonathon R Lever, Valerie Smith-Hale, Cloe Klaus, Cara Ocobock, Alan Huebner, Megan McGinty, Jonathan D Hauenstein, John P Wagle","doi":"10.1002/jbio.70016","DOIUrl":"https://doi.org/10.1002/jbio.70016","url":null,"abstract":"<p><p>This study investigated the use of thermography as a non-invasive tool to monitor physiological responses to mechanical workload in Division-I female soccer players. A total of 29 student-athletes (age: 19.8 ± 1.1 years) participated, with thermographic imaging conducted throughout training across the competitive season. A total of 8106 observations were analyzed, revealing a weak but significant negative correlation between total player load (TPL) and changes in body region temperature (∆t) (βTPL = -0.00047; p < 0.0001). For every one unit increase in TPL, skin temperature decreased by 0.00047°C on average. Similar patterns were observed in high-minute players (βTPL = -0.0046; p < 0.0001) and when excluding goalkeepers (βTPL = -0.00027, p < 0.001). Interestingly, cooler temperatures were linked to higher workloads in field players, contrasting with previous research. These findings suggest thermography may reflect physiological responses to external workload, with position-specific demands requiring tailored metrics for accurate monitoring.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e70016"},"PeriodicalIF":0.0,"publicationDate":"2025-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143712336","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rapid, Label-Free Detection of Primary Central Nervous System Lymphoma Using Multiphoton Microscopy.
Pub Date : 2025-03-24 DOI: 10.1002/jbio.70014
Xingfu Wang, Na Fang, Liwen Hu, Zanyi Wu, Lianhuang Li, Guoping Li, Yupeng Chen, Jianxin Chen, Sheng Zhang, Yueshan Piao

Accurate diagnosis is vital for treating primary central nervous system lymphoma (PCNSL) and determining patient prognosis in clinical practice. Currently, histological analysis stands as the gold standard for definitively diagnosing PCNSL, yet it is time-consuming and invasive. This study introduces multiphoton microscopy (MPM), utilizing second harmonic generation (SHG) and two-photon excited fluorescence (TPEF), to detect human PCNSL. Several diagnostic features of PCNSL, such as increased cellularity, angiocentric infiltration pattern, geographic necrosis, perivascular reticulin deposits, and apoptosis niche, are captured. Moreover, with image processing, the extent of necrosis and perivascular reticulin deposits can be automatically assessed. These research findings underscore the capability of MPM for PCNSL identification. With the advancements in multiphoton endoscopes, in vivo detection of PCNSL may be achievable.

在临床实践中,准确诊断对于治疗原发性中枢神经系统淋巴瘤(PCNSL)和确定患者预后至关重要。目前,组织学分析是明确诊断 PCNSL 的金标准,但这种方法耗时且具有侵入性。本研究介绍了利用二次谐波发生(SHG)和双光子激发荧光(TPEF)的多光子显微镜(MPM)来检测人类 PCNSL。它捕捉到了 PCNSL 的几个诊断特征,如细胞增多、血管中心浸润模式、地域性坏死、血管周围网织蛋白沉积和凋亡龛。此外,通过图像处理,还能自动评估坏死和血管周围网织红蛋白沉积的程度。这些研究成果凸显了 MPM 在 PCNSL 鉴定方面的能力。随着多光子内窥镜的发展,PCNSL 的活体检测也许可以实现。
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引用次数: 0
Toward Informative Representations of Blood-Based Infrared Spectra via Unsupervised Deep Learning.
Pub Date : 2025-03-24 DOI: 10.1002/jbio.70011
Corinna Wegner, Zita I Zarandy, Nico Feiler, Lea Gigou, Timo Halenke, Niklas Leopold-Kerschbaumer, Maik Krusche, Weronika Skibicka, Kosmas V Kepesidis

This study explores using unsupervised deep learning to find a low-dimensional representation of infrared molecular fingerprints of human blood. We developed a fully convolutional denoising autoencoder to process Fourier transform infrared (FTIR) spectroscopy data, aiming to condense the spectra into a set of latent variables. By utilizing the autoencoder's bottleneck architecture and a custom loss function, we effectively reduced noise while retaining essential molecular information. This method improved lung cancer detection accuracy by 2.6 percentage points in a case-control study. The resulting latent space not only compacts spectral data, but also highlights variables linked to disease presence, offering potential for improving diagnostics. Trial Registration: German Clinical Trials Register (DRKS): DRKS00013217.

本研究探索使用无监督深度学习来寻找人体血液红外分子指纹的低维表示。我们开发了一种全卷积去噪自动编码器来处理傅立叶变换红外(FTIR)光谱数据,旨在将光谱浓缩为一组潜在变量。通过利用自动编码器的瓶颈结构和自定义损失函数,我们有效地减少了噪音,同时保留了重要的分子信息。在一项病例对照研究中,这种方法将肺癌检测准确率提高了 2.6 个百分点。由此产生的潜在空间不仅压缩了频谱数据,还突出了与疾病存在相关的变量,为改进诊断提供了潜力。试验注册:德国临床试验注册中心(DRKS):DRKS00013217.
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引用次数: 0
PolSpec: Polarisation-Based Detection for Versatile, Cost-Effective Rapid Hyperspectral Imaging.
Pub Date : 2025-03-24 DOI: 10.1002/jbio.70012
Huihui Liu, Sunil Kumar, Edwin Garcia, Darren Ennis, Iain A McNeish, Paul M W French

"PolSpec" is a flexible, cost-effective approach for rapid (including single-shot) spectrally resolved imaging. While established approaches, e.g., using cascades of dichroic beamsplitters, diffractive image splitters, or mosaic filters, typically have pre-determined spectral detection bands with cost and experimental complexity scaling with the number of spectral channels, PolSpec uses polarisation optics to provide continuously varying transmission across a configurable spectral range to generate "spectral modulation vectors" that can represent specific spectral signatures with lower data volumes than full spectral profiles. It can be implemented with almost any detector. Here we demonstrate low-cost single-shot widefield PolSpec-based hyperspectral imaging using a polarisation-resolving camera.

{"title":"PolSpec: Polarisation-Based Detection for Versatile, Cost-Effective Rapid Hyperspectral Imaging.","authors":"Huihui Liu, Sunil Kumar, Edwin Garcia, Darren Ennis, Iain A McNeish, Paul M W French","doi":"10.1002/jbio.70012","DOIUrl":"https://doi.org/10.1002/jbio.70012","url":null,"abstract":"<p><p>\"PolSpec\" is a flexible, cost-effective approach for rapid (including single-shot) spectrally resolved imaging. While established approaches, e.g., using cascades of dichroic beamsplitters, diffractive image splitters, or mosaic filters, typically have pre-determined spectral detection bands with cost and experimental complexity scaling with the number of spectral channels, PolSpec uses polarisation optics to provide continuously varying transmission across a configurable spectral range to generate \"spectral modulation vectors\" that can represent specific spectral signatures with lower data volumes than full spectral profiles. It can be implemented with almost any detector. Here we demonstrate low-cost single-shot widefield PolSpec-based hyperspectral imaging using a polarisation-resolving camera.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e70012"},"PeriodicalIF":0.0,"publicationDate":"2025-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143702487","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Illuminating Immunity: A Systematic Review of Immune Cell Autofluorescence. 照亮免疫:免疫细胞自发荧光系统综述》。
Pub Date : 2025-03-20 DOI: 10.1002/jbio.202400576
Aline Knab, Caroline Giardina, Shane T Grey, Ewa M Goldys, Jared M Campbell

Immunophenotyping provides valuable prognostic and diagnostic information, but is technically complex and expensive. The assessment of autofluorescence is label-free and provides complex information on cell identity. However, research on its application to immunophenotyping has been heterogenous. This systematic review was carried out to identify and synthesise all available evidence on the use of autofluorescence for immunophenotyping. Eighty three full texts were included. There was a focus on neutrophils (20 papers) and macrophages (22 papers) with alveolar macrophages (13 papers) forming a subcategory. Seven studies investigated monocytes, three focused on microglia, two on dendritic cells, five on mast cells, nine on granulocytes, thirteen on eosinophils, one on erythrophagocytic cells, and one on natural killer cells. Eleven studies investigated uncategorised immune cell populations. Translation of findings into clinical immunophenotyping requires the application of reproducible methods, along with clear reporting of excitation and emission parameters, and a greater focus on clinical and primary samples.

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引用次数: 0
Enhancing the Diagnostic Evaluation of Thyroid Functionality Using Diffuse Reflectance Spectroscopy and Regression Models.
Pub Date : 2025-03-20 DOI: 10.1002/jbio.70010
W Anto Win Shalini, T Rajalakshmi, S Vasanthadev Suryakala

Thyroid dysfunction is a prevalent global health concern that necessitates the development of effective and non-invasive screening methods to enable early detection. The application of Diffuse Reflectance Spectroscopy (DRS) in conjunction with preprocessing and predictive models for thyroid dysfunction diagnosis is investigated. The raw spectral data captured from 31 individuals with thyroid dysfunction are subjected to spectral preprocessing techniques like, Standard Normal Variate (SNV), Multiplicative Scatter Correction (MSC), and Baseline Correction. The preprocessed data subjected to regression models like Partial Least Squares Regression (PLSR), Principal Component Regression (PCR), LASSO, Random Forest, Ridge Regression, Gaussian Process Regression (GPR), and Bayesian Regression were employed to analyse the efficacy of the models. The PLSR model in concurrence with SNV outperforms other regression models by achieving an R2 of 0.93, RMSE of 0.29, and MSE of 0.08, indicating low predictive error. The goodness of fit was also evaluated using Pearson's chi-squared test.

甲状腺功能障碍是全球普遍关注的健康问题,因此有必要开发有效的非侵入性筛查方法,以实现早期检测。本文研究了结合预处理和预测模型应用漫反射光谱(DRS)诊断甲状腺功能障碍的情况。从 31 名甲状腺功能障碍患者身上采集的原始光谱数据经过了光谱预处理技术,如标准正态变异(SNV)、乘法散射校正(MSC)和基线校正。对预处理后的数据采用部分最小二乘法回归(PLSR)、主成分回归(PCR)、LASSO、随机森林、岭回归、高斯过程回归(GPR)和贝叶斯回归等回归模型来分析模型的有效性。与 SNV 一致的 PLSR 模型优于其他回归模型,其 R2 为 0.93,RMSE 为 0.29,MSE 为 0.08,表明预测误差较低。拟合优度还通过皮尔逊卡方检验进行了评估。
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引用次数: 0
Variation of Structures and Blood Vessels of Visual Nervous System With Age.
Pub Date : 2025-03-18 DOI: 10.1002/jbio.70009
Ni He, Chenrui Li, Jiali Liu, Xiaolong Zhang, Liming Li, Cuixia Dai

Aging is a process of progressive functional decline associated with increasing age. The process and mechanism of aging have long been widely concerned, but long-term in vivo evaluations of the visual nervous system have not been previously reported. In this study, naturally aging mouse models were used for long-term serial evaluation, and the changes in structure and blood flow of the retina and cerebral cortex were systematically analyzed. Optical Coherence Tomography (OCT) and Optical Coherence Tomography Angiography (OCTA) were performed on mice at 3, 6, 9, and 12 months of age, respectively. Structural and vascular changes with age were quantitatively evaluated. Results show that the reduction of structural thickness and vascular density of the retinal and cerebral cortex is observed. A significant correlation is also found between structural and vascular changes in the retina and cerebral cortex, indicating a consistent impact of aging on the visual nervous system.

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引用次数: 0
Advanced Intervention Effects of Pulsed and Steady Transcranial Photobiomodulation on Sleep, Mood, and EEG Signal Regulation.
Pub Date : 2025-03-18 DOI: 10.1002/jbio.70004
Xuran Zhang, Xiaojing Miao, Hui Jiang, Yi Ren, Longfei Huo, Muqing Liu, Houbo Chen

Background: Transcranial photobiomodulation (tPBM) enhances cognitive and emotional states. We compared continuous-wave (CW) and pulsed-wave (PW) tPBM effects on 24 healthy males.

Method: Participants received 630 nm tPBM at 95 mW/cm2 for 10 min: Sham, CW, or PW (500 Hz). Outcomes were assessed using the Karolinska Sleepiness Scale (KSS) (for measuring sleepiness), State-Trait Anxiety Inventory (STAI) (for assessing anxiety), Visual Analog Scale (VAS) (for measuring stress), and Beck Depression Inventory-II (BDI-II) (for evaluating depressive symptoms), and 32-channel EEG at baseline, treatment, and rest phases.

Results: Paired t-tests showed PW tPBM significantly improved sleepiness, anxiety, stress, and depression scores post-intervention (p < 0.05). ANOVA analyses indicated PW tPBM increased Alpha and Gamma band EEG power versus baseline (p < 0.05).

Conclusion: PW tPBM may improve cognitive and emotional outcomes and modulate brain activity, offering therapeutic insights.

{"title":"Advanced Intervention Effects of Pulsed and Steady Transcranial Photobiomodulation on Sleep, Mood, and EEG Signal Regulation.","authors":"Xuran Zhang, Xiaojing Miao, Hui Jiang, Yi Ren, Longfei Huo, Muqing Liu, Houbo Chen","doi":"10.1002/jbio.70004","DOIUrl":"https://doi.org/10.1002/jbio.70004","url":null,"abstract":"<p><strong>Background: </strong>Transcranial photobiomodulation (tPBM) enhances cognitive and emotional states. We compared continuous-wave (CW) and pulsed-wave (PW) tPBM effects on 24 healthy males.</p><p><strong>Method: </strong>Participants received 630 nm tPBM at 95 mW/cm<sup>2</sup> for 10 min: Sham, CW, or PW (500 Hz). Outcomes were assessed using the Karolinska Sleepiness Scale (KSS) (for measuring sleepiness), State-Trait Anxiety Inventory (STAI) (for assessing anxiety), Visual Analog Scale (VAS) (for measuring stress), and Beck Depression Inventory-II (BDI-II) (for evaluating depressive symptoms), and 32-channel EEG at baseline, treatment, and rest phases.</p><p><strong>Results: </strong>Paired t-tests showed PW tPBM significantly improved sleepiness, anxiety, stress, and depression scores post-intervention (p < 0.05). ANOVA analyses indicated PW tPBM increased Alpha and Gamma band EEG power versus baseline (p < 0.05).</p><p><strong>Conclusion: </strong>PW tPBM may improve cognitive and emotional outcomes and modulate brain activity, offering therapeutic insights.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e70004"},"PeriodicalIF":0.0,"publicationDate":"2025-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143659914","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of biophotonics
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