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Investigation of the Effect of Compression Pressure in Contact OCT Imaging on the Measurement of Epidermis Thickness. 研究接触式 OCT 成像中的压缩压力对表皮厚度测量的影响
Pub Date : 2024-08-27 DOI: 10.1002/jbio.202400289
Zhiying Xie, Yaping Shi, Agathe Marmin, Ruikang K Wang

Optical coherence tomography (OCT) is a noninvasive 3D imaging technique that offers significant advantages over traditional microscopy and biopsy in measuring epidermal thickness (ET) when assessing skin conditions. However, OCT imagining is often required to be in a contact mode for mitigating the issues of subject movement and uneven skin topology. It is not known whether the contact would affect the ability of ET measurements. In this study, we investigate the relationship between the contact pressure applied and the ET measurements. We observed progressive deformation in the epidermis with the increase of compression forces, where a notable decrease of up to 13% in ET measurement and 70% decrease in capillary vessels was noted when imaging was in contact mode. We also observed 8.1% less deformation properties in scar tissue than in nearby healthy tissue. Our study underscored the importance of controlled pressure in contact imaging mode, which is often neglected.

光学相干断层扫描(OCT)是一种无创三维成像技术,与传统的显微镜和活组织检查相比,它在评估皮肤状况时测量表皮厚度(ET)方面具有显著优势。不过,OCT 成像通常需要在接触模式下进行,以减少受试者移动和皮肤拓扑不均匀的问题。目前还不清楚接触模式是否会影响 ET 测量的能力。在本研究中,我们研究了接触压力与 ET 测量之间的关系。我们观察到表皮随着压力的增加而逐渐变形,在接触模式下成像时,ET 测量值明显下降达 13%,毛细血管下降 70%。我们还观察到疤痕组织的变形特性比附近的健康组织低 8.1%。我们的研究强调了在接触成像模式下控制压力的重要性,而这一点往往被忽视。
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引用次数: 0
Effect of photobiomodulation in an experimental in vitro model of asthma-Copd overlap. 光生物调节在哮喘-镉重叠实验体外模型中的效果。
Pub Date : 2024-08-12 DOI: 10.1002/jbio.202400124
Marina Bertoni Guerra, Kelly Gomes Santana, Marcos Momolli, Rodrigo Labat, Maria Cristina Chavantes, Stella Regina Zammuner, José Antonio Silva Júnior, Renata Kelly da Palma, Flavio Aimbire, Ana Paula Ligeiro de Oliveira

The objective of the study was to evaluate the effect of photobiomodulation (PBM) with laser on the inflammatory process in an experimental in vitro model of ACO. The groups were: (1) human bronchial epithelial cells (BEAS-2B); (2) BEAS-2B cells treated with dexamethasone; (3) BEAS-2B cells irradiated with laser; (4) BEAS-2B cells stimulated with cigarette smoke extract (CSE) + House Dust Mite (HDM); (5) BEAS-2B cells stimulated with CSE + HDM and treated with dexamethasone; (6) BEAS-2B cells incubated with CSE + HDM and irradiated with laser. After 24 h, cytokines were quantified. There was a reduction in TNF-α, IL-1β, IL-6, IL-4, IL-5, IL-13, IL-17, IL-21, IL-23, and an increase in IL-10 and IFN-γ in cells from the laser-irradiated ACO group compared to only ACO group. With these results, we can suggest that photobiomodulation acts in the modulation of inflammation observed in ACO, and may be a treatment option.

该研究旨在评估激光光生物调节(PBM)对 ACO 实验性体外模型炎症过程的影响。实验组包括(1) 人支气管上皮细胞(BEAS-2B);(2) 用地塞米松处理的 BEAS-2B 细胞;(3) 用激光照射的 BEAS-2B 细胞;(4) 用香烟烟雾提取物(CSE)+屋尘螨(HDM)刺激的 BEAS-2B 细胞;(5)用 CSE + HDM 刺激 BEAS-2B 细胞并用地塞米松处理;(6)用 CSE + HDM 培养 BEAS-2B 细胞并用激光照射。24 小时后,对细胞因子进行量化。与只用 ACO 组相比,用激光照射 ACO 组的细胞中 TNF-α、IL-1β、IL-6、IL-4、IL-5、IL-13、IL-17、IL-21、IL-23 减少,IL-10 和 IFN-γ 增加。根据这些结果,我们可以认为,光生物调制对 ACO 中观察到的炎症有调节作用,可能是一种治疗选择。
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引用次数: 0
Signatures of top versus bottom illuminations and their predicted implications for infrared transmission microspectroscopy. 顶部照明与底部照明的特征及其对红外透射显微光谱学的影响预测。
Pub Date : 2024-08-11 DOI: 10.1002/jbio.202400079
Beibei Kong, Reinhold Blümel, Pasi Ylä-Oijala, Henrik Wallén, Ari Sihvola, Achim Kohler

Since both top and bottom illuminations are widely used in infrared transmission measurements, in this paper, we study the effects of different illuminations on the signatures in infrared microspectroscopy. By simulating a series of dielectric samples, we show that their extinction efficiency, Q ext $$ {Q}_{mathrm{ext}} $$ , remains unchanged when the direction of the incident plane wave is reversed, even though the field distributions both inside and outside of the sample may be dramatically different. We find features in Q ext $$ {Q}_{mathrm{ext}} $$ that are correlated with whispering gallery modes for one beam direction and correspond to completely different field distributions for the opposite beam direction. In addition, by linking the optical theorem and the reciprocity relation of far-field scattered field, we rigorously prove the invariance of Q ext $$ {Q}_{mathrm{ext}} $$ for arbitrary dielectric targets under opposite plane-wave illuminations. Furthermore, we show the difference in the apparent absorbance spectrum for opposite beam directions when considering numerical apertures.

由于顶部和底部照明在红外透射测量中都被广泛使用,本文研究了不同照明对红外显微光谱分析中信号的影响。通过模拟一系列电介质样品,我们发现它们的消光效率 Q ext $$ {Q}_{mathrm{ext}}$$$ ,当入射平面波的方向相反时保持不变,即使样品内外的场分布可能有很大不同。我们在 Q ext $$ {Q}_{mathrm{ext}} 中发现了与耳语相关的特征。$$ 中的特征,这些特征在一个光束方向上与耳语画廊模式相关,而在相反的光束方向上则与完全不同的场分布相对应。此外,通过将光学定理与远场散射场的互易关系联系起来,我们严格证明了 Q ext $$ {Q}_{mathrm{ext}} 的不变性。$$ 在相反平面波照射下对任意介质目标的不变性。此外,我们还展示了在考虑数值孔径时,相反光束方向的视吸收光谱的差异。
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引用次数: 0
Incorporating artificial intelligence in portable infrared thermal imaging for the diagnosis and staging of nonalcoholic fatty liver disease. 将人工智能纳入便携式红外热成像,用于非酒精性脂肪肝的诊断和分期。
Pub Date : 2024-08-06 DOI: 10.1002/jbio.202400189
Yana Davidov, Rafael Y Brzezinski, Monica-Inda Kaufmann, Mariya Likhter, Tammy Hod, Orit Pappo, Yair Zimmer, Zehava Ovadia-Blechman, Neta Rabin, Adi Barlev, Orli Berman, Ziv Ben Ari, Oshrit Hoffer

Metabolic Dysfunction-Associated Steatotic Liver Disease (MASLD) is one of the most prevalent chronic liver diseases worldwide. Thermal imaging combined with advanced image-processing and machine learning analysis accurately classified disease status in a study on mice; this study aimed to develop this tool for humans. This prospective study included 46 patients who underwent liver biopsy. Liver thermal imaging was performed on the same day as liver biopsy. We developed an image-processing algorithm that measured the relative spatial thermal variation across the skin covering the liver. The texture parameters obtained from the thermal images were input into the machine learning algorithm. Patients were diagnosed with MASLD and stratified according to nonalcoholic fatty liver disease activity score (NAS) and fibrosis stage using the METAVIR score. Twenty-one of 46 patients were diagnosed with MASLD. Using thermal imaging followed by processing, detection accuracy for patients with NAS >4 was 0.72.

代谢功能障碍相关性脂肪肝(MASLD)是全球最普遍的慢性肝病之一。在一项针对小鼠的研究中,热成像与先进的图像处理和机器学习分析相结合,准确地对疾病状态进行了分类;本研究旨在为人类开发这一工具。这项前瞻性研究包括 46 名接受肝活检的患者。肝脏热成像与肝活检在同一天进行。我们开发了一种图像处理算法,用于测量覆盖肝脏皮肤的相对空间热变化。从热图像中获得的纹理参数被输入到机器学习算法中。患者被诊断为MASLD,并根据非酒精性脂肪肝活动评分(NAS)和纤维化分期使用METAVIR评分进行分层。46 名患者中有 21 人被确诊为 MASLD。使用热成像后进行处理,NAS>4患者的检测准确率为0.72。
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引用次数: 0
Texture-based speciation of otitis media-related bacterial biofilms from optical coherence tomography images using supervised classification. 利用监督分类法从光学相干断层扫描图像中对中耳炎相关细菌生物膜进行基于纹理的分类。
Pub Date : 2024-08-05 DOI: 10.1002/jbio.202400075
Farzana R Zaki, Guillermo L Monroy, Jindou Shi, Kavya Sudhir, Stephen A Boppart

Otitis media (OM), a highly prevalent inflammatory middle-ear disease in children worldwide, is commonly caused by an infection, and can lead to antibiotic-resistant bacterial biofilms in recurrent/chronic OM cases. A biofilm related to OM typically contains one or multiple bacterial species. OCT has been used clinically to visualize the presence of bacterial biofilms in the middle ear. This study used OCT to compare microstructural image texture features from bacterial biofilms. The proposed method applied supervised machine-learning-based frameworks (SVM, random forest, and XGBoost) to classify multiple species bacterial biofilms from in vitro cultures and clinically-obtained in vivo images from human subjects. Our findings show that optimized SVM-RBF and XGBoost classifiers achieved more than 95% of AUC, detecting each biofilm class. These results demonstrate the potential for differentiating OM-causing bacterial biofilms through texture analysis of OCT images and a machine-learning framework, offering valuable insights for real-time in vivo characterization of ear infections.

中耳炎(OM)是全球儿童高发的一种中耳炎性疾病,通常由感染引起,在复发性/慢性中耳炎病例中可导致抗生素耐药细菌生物膜。与 OM 相关的生物膜通常包含一种或多种细菌。OCT 已被临床用于观察中耳是否存在细菌生物膜。本研究使用 OCT 比较细菌生物膜的微结构图像纹理特征。所提出的方法应用了基于机器学习的监督框架(SVM、随机森林和 XGBoost),对体外培养和临床获得的人体活体图像中的多种细菌生物膜进行分类。我们的研究结果表明,经过优化的 SVM-RBF 和 XGBoost 分类器的 AUC 超过了 95%,能检测出每一类生物膜。这些结果证明了通过对 OCT 图像的纹理分析和机器学习框架来区分 OM 致病细菌生物膜的潜力,为耳部感染的实时活体特征描述提供了有价值的见解。
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引用次数: 0
Multi-color two-laser super-resolution structured illumination microscopy for the visualization of multi-organelle in living cells. 用于活细胞多细胞器可视化的多色双激光超分辨率结构照明显微镜。
Pub Date : 2024-08-04 DOI: 10.1002/jbio.202400154
Xuejuan Hu, Yadan Tan, Yujie Huang, Jianze Ye, Yifei Liang, Xiaokun Yang, Hengliang Wang, Zihao Cheng, Lihu Wang, Shiqian Liu, Minfei Li, Zhengdi He, Qianding Gao, Jingli Zhong

In this study, we introduced a novel dual-laser multi-color imaging system. Integrated with a multi-channel filter wheel, this system compared three spectral decontamination algorithms (nonnegative matrix factorization [NMF], RCAN, and PICASSO) showcasing its efficacy in achieving four-color imaging with only two laser sources. Combined with a reliable image reconstruction algorithm, the spatial resolution of four channels super-resolution four-color images reached 130, 125, 133, and 132 nm, respectively. Lipid droplets, mitochondria, lysosomes, and nuclei from the mouse hepatocytes (AML12), human neuroblastoma cells (SH-SY5Y), mouse hippocampal neuronal cells (HT-22), and immortalized murine bone marrow-derived macrophages were imaged. At the same time, the chromatin condensation, nuclear contraction, DNA fragmentation, apoptotic body formation, as well as the fusion of Mito and Lyso involved in mitochondrial autophagy were observed in HT-22 and SH-SY5Y cells suffering oxidative stress. Our multi-color SIM imaging system establishes a powerful platform for dynamic organelle studies and other high-resolution investigations in live cells.

在这项研究中,我们介绍了一种新型双激光多色成像系统。该系统集成了一个多通道滤光轮,比较了三种光谱净化算法(非负矩阵因式分解[NMF]、RCAN 和 PICASSO),展示了其在仅使用两个激光源实现四色成像方面的功效。结合可靠的图像重建算法,四通道超分辨率四色图像的空间分辨率分别达到了 130、125、133 和 132 nm。对小鼠肝细胞(AML12)、人神经母细胞瘤细胞(SH-SY5Y)、小鼠海马神经元细胞(HT-22)和永生化小鼠骨髓巨噬细胞的脂滴、线粒体、溶酶体和细胞核进行了成像。同时,在遭受氧化应激的 HT-22 和 SH-SY5Y 细胞中观察到染色质凝结、核收缩、DNA 断裂、凋亡体形成以及参与线粒体自噬的 Mito 和 Lyso 融合。我们的多色 SIM 成像系统为活细胞中的动态细胞器研究和其他高分辨率研究建立了一个强大的平台。
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引用次数: 0
Intelligent skin-removal photoacoustic computed tomography for human based on deep learning. 基于深度学习的智能皮肤去除光声计算机断层扫描。
Pub Date : 2024-08-02 DOI: 10.1002/jbio.202400197
Ning Wang, Tao Chen, Chengbo Liu, Jing Meng

Photoacoustic computed tomography (PACT) has centimeter-level imaging ability and can be used to detect the human body. However, strong photoacoustic signals from skin cover deep tissue information, hindering the frontal display and analysis of photoacoustic images of deep regions of interest. Therefore, we propose a 2.5 D deep learning model based on feature pyramid structure and single-type skin annotation to extract the skin region, and design a mask generation algorithm to remove skin automatically. PACT imaging experiments on the human periphery blood vessel verified the correctness our proposed skin-removal method. Compared with previous studies, our method exhibits high robustness to the uneven illumination, irregular skin boundary, and reconstruction artifacts in the images, and the reconstruction errors of PACT images decreased by 20% ~ 90% with a 1.65 dB improvement in the signal-to-noise ratio at the same time. This study may provide a promising way for high-definition PACT imaging of deep tissues.

光声计算机断层扫描(PACT)具有厘米级成像能力,可用于探测人体。然而,来自皮肤的强光声信号会覆盖深层组织信息,阻碍深层感兴趣区域光声图像的正面显示和分析。因此,我们提出了一种基于特征金字塔结构和单一类型皮肤标注的 2.5 D 深度学习模型来提取皮肤区域,并设计了一种自动去除皮肤的掩膜生成算法。对人体外周血管的 PACT 成像实验验证了我们提出的皮肤去除方法的正确性。与之前的研究相比,我们的方法对图像中不均匀光照、不规则皮肤边界和重建伪影表现出很高的鲁棒性,PACT 图像的重建误差降低了 20% ~ 90%,信噪比同时提高了 1.65 dB。这项研究为深部组织的高清 PACT 成像提供了一条可行的途径。
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引用次数: 0
Analysis of image formation in optical palpation. 光学触诊图像形成分析。
Pub Date : 2024-07-30 DOI: 10.1002/jbio.202400180
R Jones, Q Fang, B F Kennedy

Optical palpation is an emerging elastography technique that generates two-dimensional images of mechanical stress at the tissue surface, with clinical applications such as intraoperative cancer detection and scar assessment. It has been implemented using various imaging systems, however, an analysis of how deformation of the sample and layer influences image formation has not been performed. Here, an analysis framework is presented, which assesses performance independently of the imaging system used. Optical palpation of varying samples and layers is simulated using finite element analysis and validated with experiments on silicone phantoms, providing a characterization of detectability, feature resolution, and contrast ratio. Using our framework, we demonstrate that computational optical palpation, which incorporates realistic assumptions of layer deformation, improves the feature resolution up to a factor of four. This framework can guide the development of optical palpation and aid in the selection of appropriate imaging system and layer properties for a given application.

光学触诊是一种新兴的弹性成像技术,可生成组织表面机械应力的二维图像,临床应用包括术中癌症检测和疤痕评估。该技术已通过各种成像系统实现,但尚未对样本和层的变形如何影响图像形成进行分析。本文提出了一个分析框架,可独立于所使用的成像系统评估性能。利用有限元分析模拟了不同样本和层的光学触诊,并通过硅胶模型实验进行了验证,提供了可探测性、特征分辨率和对比度的特征。利用我们的框架,我们证明了计算光学触诊结合了真实的层变形假设,可将特征分辨率提高达四倍。这个框架可以指导光学触诊的开发,并帮助为特定应用选择合适的成像系统和层特性。
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引用次数: 0
Angiogenesis-elicited spectral responses of early invasive skin melanoma: Implications for the evaluation of lesion progression. 早期浸润性皮肤黑色素瘤的血管生成诱导光谱反应:对评估病变进展的意义。
Pub Date : 2024-07-30 DOI: 10.1002/jbio.202400208
Gladimir V G Baranoski, Petri M Varsa

Early invasive skin melanoma (EISM) associated with partial tumor invasion to the thin and optically complex papillary dermis (PD) represents a critical stage before the onset of metastasis. EISM lesions may be accompanied by angiogenesis, which can alter the PD's blood and fibril contents. A comprehensive understanding about these interconnected processes is essential for enhancing the efficacy of EISM optical evaluation methodologies. Employing a first-principles computational approach supported by measured data, we systematically assess the impact that angiogenesis can have on the EISM's spectral responses. Our findings indicate that these responses are discernibly affected by angiogenesis under distinct physiological conditions, with more substantial tissue alterations leading to accentuated spectral changes in the 550-600 nm region. Accordingly, we propose the use of a customized low-cost spectral index to monitor these processes. Furthermore, our investigation provides a high-fidelity in silico platform for interdisciplinary research on the photobiology of evolving skin melanomas.

早期浸润性皮肤黑色素瘤(EISM)伴有肿瘤部分侵入薄而光学结构复杂的真皮乳头层(PD),是转移开始前的一个关键阶段。EISM病变可能伴有血管生成,这会改变真皮乳头的血液和纤维内容。全面了解这些相互关联的过程对于提高 EISM 光学评估方法的有效性至关重要。在测量数据的支持下,我们采用第一原理计算方法,系统地评估了血管生成对 EISM 光谱响应的影响。我们的研究结果表明,在不同的生理条件下,血管生成会对这些响应产生明显的影响,组织的实质性改变会导致 550-600 纳米区域的光谱变化加剧。因此,我们建议使用定制的低成本光谱指数来监测这些过程。此外,我们的研究还为不断演变的皮肤黑色素瘤的光生物学跨学科研究提供了一个高保真硅学平台。
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引用次数: 0
Cardiac-gated spectroscopic photoacoustic imaging for ablation-induced necrotic lesion visualization. 用于消融引起的坏死病灶可视化的心脏门控光谱光声成像。
Pub Date : 2024-07-29 DOI: 10.1002/jbio.202400126
Shang Gao, Hiroshi Ashikaga, Masahito Suzuki, Tommaso Mansi, Young-Ho Kim, Florin-Cristian Ghesu, Jeeun Kang, Emad M Boctor, Henry R Halperin, Haichong K Zhang

Radiofrequency (RF) ablation is a minimally invasive therapy for atrial fibrillation. Conventional RF procedures lack intraoperative monitoring of ablation-induced necrosis, complicating assessment of completeness. While spectroscopic photoacoustic (sPA) imaging shows promise in distinguishing ablated tissue, multi-spectral imaging is challenging in vivo due to low imaging quality caused by motion. Here, we introduce a cardiac-gated sPA imaging (CG-sPA) framework to enhance image quality using a motion-gated averaging filter, relying on image similarity. Necrotic extent was calculated based on the ratio between spectral unmixed ablated tissue contrast and total tissue contrast, visualizing as a continuous color map to highlight necrotic area. The validation of the concept was conducted in both ex vivo and in vivo swine models. The ablation-induced necrotic lesion was successfully detected throughout the cardiac cycle through CG-sPA imaging. The results suggest the CG-sPA imaging framework has great potential to be incorporated into clinical workflow to guide ablation procedures intraoperatively.

射频消融术是治疗心房颤动的一种微创疗法。传统的射频手术缺乏对消融引起的坏死的术中监测,从而使完整性评估变得复杂。虽然光谱光声(sPA)成像有望区分消融组织,但由于运动导致成像质量低,多光谱成像在体内具有挑战性。在这里,我们引入了心脏门控 sPA 成像(CG-sPA)框架,利用运动门控平均滤波器,依靠图像相似性提高图像质量。坏死范围是根据光谱未混合消融组织对比度与总组织对比度之间的比率计算得出的,并以连续彩色图的形式显示,以突出坏死区域。在体内外猪模型中对这一概念进行了验证。通过 CG-sPA 成像,在整个心脏周期中都能成功检测到消融引起的坏死病灶。结果表明,CG-sPA 成像框架很有可能被纳入临床工作流程,为术中消融手术提供指导。
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引用次数: 0
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Journal of biophotonics
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