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Achieving High-Precision Attenuation Coefficient Measurement in Optical Coherence Tomography. 在光学相干层析成像中实现高精度衰减系数测量。
Pub Date : 2025-01-16 DOI: 10.1002/jbio.202400395
Linda B Neubrand, Xavier Attendu, Ton G van Leeuwen

In this study, we aim to validate the analytical Cramer-Rao lower bound (CRLB) equation for determining attenuation coefficients using a 1310 nm Optical Coherence Tomography (OCT) system. Our experimental results successfully confirm the validity of the equation, achieving unprecedented precision with a standard deviation below 0.01 mm-1 for intralipid samples. Furthermore, we introduce a systematic framework for attaining high precision in OCT attenuation measurements.

在这项研究中,我们的目标是利用1310 nm光学相干层析成像(OCT)系统验证用于确定衰减系数的解析性Cramer-Rao下界(CRLB)方程。我们的实验结果成功地证实了方程的有效性,在脂质内样品的标准偏差低于0.01 mm-1的情况下实现了前所未有的精度。此外,我们还介绍了一种用于实现高精度OCT衰减测量的系统框架。
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引用次数: 0
Zerumbone Induces Apoptosis in Non-Small-Cell Lung Cancer via Biomolecular Alterations: A Microscopic and Spectroscopic Study. 泽润邦通过生物分子改变诱导非小细胞肺癌细胞凋亡:一项显微镜和光谱学研究。
Pub Date : 2025-01-14 DOI: 10.1002/jbio.202400500
Çağla Zübeyde Köprü, Burcu Baba, Dilek Yonar

Zerumbone is a sesquiterpene phytochemical with cytotoxic activity against cancer. This study aimed to evaluate the effect of zerumbone on cell viability by WST-1 test, apoptosis by TUNEL, lipid peroxidation markers (malondialdehyde, MDA, and 4-hydroxynonenal, HNE) by using assay kits, and biomolecular changes by ATR-FTIR spectroscopy in A549 cells. After zerumbone (0-100 μM) incubation for 24, 48, and 72 h, the number of TUNEL-positive cells was found to be higher in zerumbone-treated cells than in controls, in consistent with cell morphology results. MDA levels increased significantly, although HNE levels increased non-significantly in zerumbone-treated cells. Spectral analyses revealed that the zerumbone-treated groups had higher levels of total saturated and unsaturated lipids as well as comparatively shorter-chain lipids. On the contrary, reduced RNA/DNA ratio, total nucleic acid, and protein content were found in zerumbone-treated groups. Consequently, zerumbone-induced apoptosis was accompanied by increased aldehyde products during lipid peroxidation as well as biomolecular alterations.

Zerumbone是一种倍半萜植物化学物质,具有抗癌细胞毒活性。本研究旨在通过WST-1实验评估零骨对A549细胞活力的影响,通过TUNEL检测细胞凋亡,通过检测试剂盒评估脂质过氧化标志物(丙二醛、MDA和4-羟基壬烯醛,HNE)的影响,并通过ATR-FTIR光谱评估生物分子变化。zerumbone (0-100 μM)孵育24、48和72 h后,发现zerumbone处理的细胞tunel阳性细胞数量高于对照组,这与细胞形态学结果一致。在zerumbone处理的细胞中,MDA水平显著升高,而HNE水平无显著升高。光谱分析显示,零元处理组有较高水平的总饱和和不饱和脂质,以及相对较短的链脂质。与此相反,zerumbone处理组的RNA/DNA比、总核酸和蛋白质含量均降低。因此,zerumbone诱导的细胞凋亡伴随着脂质过氧化过程中醛产物的增加以及生物分子的改变。
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引用次数: 0
Parameter-Tuned Pulsed Wave Photobiomodulation Enhances Stem Cells From Apical Papilla Differentiation: Evidence From Gene and Protein Analyses. 参数调谐脉冲波光生物调节促进根尖乳头分化干细胞:来自基因和蛋白质分析的证据。
Pub Date : 2025-01-14 DOI: 10.1002/jbio.202400348
Moon-Ho Kang, Hong Bae Kim, Jong Hoon Chung, Pill-Hoon Choung

This study examines the effects of pulsed wave photobiomodulation (pwPBM) on the osteogenic differentiation of stem cells from the apical papilla (SCAP). Using 810 nm near-infrared (NIR) light with 300 Hz pulses and a 30% duty cycle, pwPBM was applied at a total energy density of 750 mJ/cm2. Osteogenesis was evaluated through both in vitro and in vivo analyses. In vitro experiments demonstrated significant enhancement of alkaline phosphatase (ALP) activity, along with upregulation of key osteogenesis-related genes and proteins, as confirmed by real-time polymerase chain reaction (PCR) and Western blot analyses. In vivo, histological assessments following SCAP transplantation revealed increased bone tissue formation, further corroborated by osteocalcin staining. These findings underscore the potential of pwPBM as an innovative and effective tool for dental tissue regeneration and engineering.

研究了脉冲波光生物调节(pwPBM)对根尖乳头(SCAP)干细胞成骨分化的影响。采用810 nm近红外(NIR)光,300 Hz脉冲,30%占空比,以750 mJ/cm2的总能量密度施加pwPBM。通过体外和体内分析来评估成骨作用。通过实时聚合酶链反应(PCR)和Western blot分析证实,体外实验显示碱性磷酸酶(ALP)活性显著增强,关键成骨相关基因和蛋白上调。在体内,SCAP移植后的组织学评估显示骨组织形成增加,骨钙素染色进一步证实了这一点。这些发现强调了pwPBM作为一种创新和有效的牙组织再生和工程工具的潜力。
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引用次数: 0
Assessment of a Single-Element Scanning System for Enhanced Photoacoustic Imaging of Brain Hemorrhage. 评估用于脑出血增强光声成像的单元素扫描系统
Pub Date : 2025-01-13 DOI: 10.1002/jbio.202400153
Juliana Benavides Lara, Ravi Prakash, Kamran Avanaki

The use of photoacoustic brain imaging for hemorrhage detection holds significant clinical importance. This study focuses on the performance of sensitivity and detection capabilities of a single-element scanning system, considering the remarkable signal-to-noise ratio of photoacoustic signals generated by a single-element transducer. By employing blood vessel-like phantoms and ex vivo brain phantoms, we demonstrated the superior efficacy of the single-element scanning method over the transducer array system in the context of brain hemorrhage detection. This research highlights the potential for enhancing hemorrhage detection sensitivity through careful design and optimization of the proposed method, thereby increasing its viability for clinical application.

光声脑成像在出血检测中的应用具有重要的临床意义。考虑到单元件换能器产生的光声信号具有显著的信噪比,本研究重点研究了单元件扫描系统的灵敏度和检测能力。通过使用血管样幻象和离体脑幻象,我们证明了单元素扫描方法在脑出血检测方面优于传感器阵列系统。本研究强调了通过精心设计和优化所提出的方法来提高出血检测灵敏度的潜力,从而提高了其临床应用的可行性。
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引用次数: 0
Neuronal Imaging at 8-Bit Depth to Combine High Spatial and High Temporal Resolution With Acquisition Rates Up To 40 kHz. 神经元成像在8位深度结合高空间和高时间分辨率与采集率高达40 kHz。
Pub Date : 2025-01-10 DOI: 10.1002/jbio.202400513
Fatima Abbas, Ömer Yusuf İpek, Philippe Moreau, Marco Canepari

A challenge in neuroimaging is acquiring frame sequences at high temporal resolution from the largest possible number of pixels. Measuring 1%-10% fluorescence changes normally requires 12-bit or higher bit depth, constraining the frame size allowing imaging in the kHz range. We resolved Ca2+ or membrane potential signals from cell populations or single neurons in brain slices by acquiring fluorescence at 8-bit depth and by binning pixels offline, achieving unprecedented frame sizes at kHz rates. In hippocampal slices stained with the Ca2+ indicator Fluo-4 AM, we resolved transients at 2 kHz from large frames. Along the apical dendrite of a layer-5 pyramidal neuron, we measured Ca2+ signals associated with a back-propagating action potential at 10 kHz. Finally, in the axon initial segment of the same cell type, we recorded an action potential at 40 kHz by voltage-sensitive dye imaging. This approach unlocks the potential for a range of imaging measurements.

从尽可能多的像素中获取高时间分辨率的帧序列是神经成像的一个挑战。测量1%-10%的荧光变化通常需要12位或更高的位深度,这限制了帧大小,允许在kHz范围内成像。我们通过获取8位深度的荧光和离线像素,在脑切片中从细胞群或单个神经元中分离Ca2+或膜电位信号,以kHz速率实现前所未有的帧大小。在用Ca2+指示剂Fluo-4 AM染色的海马切片中,我们从大帧中分辨出2 kHz的瞬态。沿着第5层锥体神经元的顶端树突,我们测量了与10 kHz反向传播动作电位相关的Ca2+信号。最后,在同一细胞类型的轴突起始段,我们用电压敏感染料成像记录了40 kHz的动作电位。这种方法开启了一系列成像测量的潜力。
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引用次数: 0
Ion-Regulated Signal Amplification Optical Microfiber Interferometric DNA Sensor. 离子调节信号放大光学微光纤干涉DNA传感器。
Pub Date : 2025-01-07 DOI: 10.1002/jbio.202400389
Hanglin Lu, Li Yang, Yuanpeng Li, Jian Tang, Laipeng Shao, Kepeng Fu, Jinpeng Wei, Yalan Niu, Juihui Hu

Genetic information sensors play a pivotal role in the biomedical field. The detection of deoxyribonucleic acid (DNA) is achieved experimentally using an optical microfiber interferometric sensor, which operates based on an ion-regulation sensitivity enhancement mechanism. The optical microfiber is fabricated by drawing optical fiber into a diameter of less than 10 μm via the melting and tapering technique. Leveraging the characteristics of monovalent cations can effectively promote the folding of G-rich single-stranded DNA (ssDNA) into stable G-quadruplex structures, enabling the detection of specific sequences of ssDNA at low concentrations. The results show an improvement of the linear detection range by 3 orders of magnitude, and with the introduction of the ion-regulation sensitivity enhancement mechanism, the limit of detection (LOD) value is 1.07 × 10-15 M. This optical microfiber interferometric sensing architecture is characterized by its simplicity and high sensitivity, positioning it as a formidable tool for diverse biosensing and analytical applications.

遗传信息传感器在生物医学领域起着举足轻重的作用。采用基于离子调节灵敏度增强机制的光纤干涉传感器,实验实现了脱氧核糖核酸(DNA)的检测。该超细光纤是通过熔融变细技术将光纤拉细成直径小于10 μm的光纤制成的。利用一价阳离子的特性,可以有效地促进富含g的单链DNA (ssDNA)折叠成稳定的g -四重结构,从而可以在低浓度下检测到ssDNA的特定序列。结果表明,该方法的线性检测范围提高了3个数量级,并引入离子调节灵敏度增强机制,检测限(LOD)值为1.07 × 10-15 M。这种光学微光纤干涉传感结构的特点是其简单和高灵敏度,将其定位为各种生物传感和分析应用的强大工具。
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引用次数: 0
Mueller-Matrix Interferometric Multifractal Scaling of Optically Anisotropic Architectonics of Diffuse Blood Facies: Fundamental and Applied Aspects. 弥漫性血相光学各向异性结构的mueller -矩阵干涉多重分形标度:基础与应用
Pub Date : 2025-01-06 DOI: 10.1002/jbio.202400412
Yurii Ushenko, Alexander Ushenko, Alexander Dubolazov, Iryna Soltys, Olexandra Litvinenko, Oleh Wanchuliak, Yulia Sarkisova, Ivan Mikirin, Olexander Salega, Jun Zheng, Lin Bin

The article describes a technique for digital holographic reconstruction of complex amplitude fields in diffuse blood facies using laser polarization-interference phase scanning to isolate a single scattered component of the object field. This method serves as the basis for developing algorithms for Mueller-matrix reconstruction of linear and circular birefringence parameters in the polycrystalline architectonics of blood facies. Statistical (central moments of the 1st-4th orders) and multifractal analyses (fractal dimension spectra) are applied to study the optical anisotropy maps of polycrystalline networks during blood dehydration. The study explores a practical application in the differential diagnosis of blood loss volume, identifying higher-order central moments (skewness, kurtosis) as sensitive markers. The method achieved a maximum accuracy of 92.9% in differentiating blood loss volume.

本文介绍了一种利用激光偏振干涉相位扫描分离物体场的单一散射分量的漫射血相复杂振幅场的数字全息重建技术。该方法为开发血液相多晶结构中线性和圆形双折射参数的mueller矩阵重建算法奠定了基础。应用统计(1 -4阶中心矩)和多重分形分析(分维谱)研究了血液脱水过程中多晶网络的光学各向异性图。该研究探讨了在失血量鉴别诊断中的实际应用,确定高阶中心矩(偏度,峰度)作为敏感标记。该方法鉴别失血量的准确率最高可达92.9%。
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引用次数: 0
Integration of Optical Coherence Tomography Images and Real-Life Clinical Data for Deep Learning Modeling: A Unified Approach in Prognostication of Diabetic Macular Edema. 整合光学相干断层扫描图像和真实临床数据的深度学习建模:糖尿病黄斑水肿预后的统一方法。
Pub Date : 2024-12-29 DOI: 10.1002/jbio.202400315
Muhammed Enes Atik, İbrahim Kocak, Nihat Sayin, Sadik Etka Bayramoglu, Ahmet Ozyigit

The primary ocular effect of diabetes is diabetic retinopathy (DR), which is associated with diabetic microangiopathy. Diabetic macular edema (DME) can cause vision loss for people with DR. For this reason, deciding on the appropriate treatment and follow-up has a critical role in terms of curing the disease. Current artificial intelligence (AI) approaches focus on OCT images and may ignore clinical, laboratory, and demographic information obtained by the specialist. This study presents a novel deep learning (DL) framework for evaluating the visual outcome of the TREX anti-VEGF intravitreal injection regimen. DL models are trained to extract deep features from OCT and ILM topographic images and the obtained deep features are combined with patients' demographic, clinical, and laboratory findings to predict the direction of the treatment process. When the ResNet-18 network is used, the proposed DL framework is able to predict the prognosis status of patients with the highest accuracy.

糖尿病的主要眼部影响是糖尿病视网膜病变(DR),这与糖尿病微血管病变有关。糖尿病性黄斑水肿(DME)可导致dr患者视力丧失,因此,决定适当的治疗和随访对治疗该疾病具有关键作用。目前的人工智能(AI)方法侧重于OCT图像,可能会忽略专家获得的临床、实验室和人口统计信息。本研究提出了一个新的深度学习(DL)框架,用于评估TREX抗vegf玻璃体内注射方案的视觉效果。DL模型经过训练,从OCT和ILM地形图像中提取深度特征,并将获得的深度特征与患者的人口统计学、临床和实验室结果相结合,以预测治疗过程的方向。当使用ResNet-18网络时,所提出的深度学习框架能够以最高的准确率预测患者的预后状况。
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引用次数: 0
Prototype of Implant for Nitric Oxide Release Controlled by Infrared Radiation in Therapeutic Window. 在治疗窗口通过红外线辐射控制一氧化氮释放的植入物原型。
Pub Date : 2024-12-25 DOI: 10.1002/jbio.202400455
Natalia A Virts, Tatyana Yu Karogodina, Mikhail A Panfilov, Alexey Yu Vorob'ev, Alexander E Moskalensky

Local therapeutic action and targeted drug release are promising approaches compared to traditional systemic drug administration. This is especially relevant for nitric oxide (NO), as its effects change dramatically depending on concentration and cellular context. Materials capable of releasing NO in deep tissues in a controlled manner might open new therapeutic opportunities. Light-sensitive NO donors represent a fascinating class of compounds with significant potential for precise and controlled NO release. However, most of them are sensitive to visible light, with only a few examples absorbing in a near-infrared therapeutic window. Here, we present the proof-of-concept of soft implants consisting of the photon upconverting core and the outer shell loaded with visible-light triggered NO donor. The separation into two compartments results in efficient energy harvesting by the dye and effective NO release under 980 nm infrared irradiation. Such implants could be used in smart therapies implying well-controlled and localized NO release.

与传统的全身给药相比,局部治疗作用和靶向药物释放是很有前途的方法。这与一氧化氮(NO)尤其相关,因为它的作用会根据浓度和细胞环境发生巨大变化。能够在深层组织中以可控的方式释放NO的材料可能会开辟新的治疗机会。光敏NO供体代表了一类迷人的化合物,具有精确和控制NO释放的巨大潜力。然而,它们中的大多数对可见光敏感,只有少数例子吸收近红外治疗窗口。在这里,我们提出了由光子上转换核心和装载可见光触发NO供体的外壳组成的软植入物的概念验证。在980 nm的红外照射下,染料能有效地收集能量,并有效地释放NO。这种植入物可以用于智能治疗,意味着良好控制和局部NO释放。
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引用次数: 0
Design and Validation of a Multimodal Diffuse Reflectance and Spatially Offset Raman Spectroscopy System for In Vivo Applications. 体内应用的多模态漫反射和空间偏移拉曼光谱系统的设计和验证。
Pub Date : 2024-12-25 DOI: 10.1002/jbio.202400333
April Mordi, Varsha Karunakaran, Umme Marium Mim, Eric Marple, Narasimhan Rajaram

We report on the development of a multimodal spectroscopy system, combining diffuse reflectance spectroscopy (DRS) and spatially offset Raman spectroscopy (SORS). A fiber optic probe was designed with spatially offset source-detector fibers to collect subsurface measurements for each modality, as well as ball lens-coupled fibers for superficial measurements. The system acquires DRS, zero-offset Raman spectroscopy (RS) and SORS with good signal-to-noise ratio. Measurements on chicken breast tissue demonstrate that both DRS and RS can acquire spectra from similar depths within tissue. Measurements acquired from the skin of a human volunteer demonstrate distinct Raman peaks at 937 and 1755 cm-1 that were unique to the zero-offset ball lens configuration and 718 and 1089 cm-1 for the spatially offset setting. We also identified Raman peaks corresponding to melanin that were prominent in the superficial measurements obtained with the ball lens-coupled fibers but not in the spatially offset fibers.

我们报告了一个多模态光谱系统的发展,结合漫反射光谱(DRS)和空间偏移拉曼光谱(SORS)。设计了一种光纤探头,采用空间偏移源探测器光纤来收集每种模态的地下测量数据,以及球透镜耦合光纤来收集表面测量数据。该系统采集到的DRS、零偏移拉曼光谱(RS)和传感器具有良好的信噪比。对鸡胸组织的测量表明,DRS和RS都可以获得组织内相似深度的光谱。从人类志愿者的皮肤上获得的测量结果显示,在937和1755 cm-1处有明显的拉曼峰,这是零偏移球透镜配置所特有的,而在718和1089 cm-1处则是空间偏移设置所特有的。我们还确定了与黑色素对应的拉曼峰,这些拉曼峰在球透镜耦合光纤获得的表面测量中很突出,但在空间偏移光纤中却没有。
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引用次数: 0
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Journal of biophotonics
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