首页 > 最新文献

Journal of biophotonics最新文献

英文 中文
Three-Dimensional Influence of Photobiomodulation on Adipose-Derived Stem Cell Behavior. 光生物调节对脂肪来源干细胞行为的三维影响。
IF 2.3 Pub Date : 2025-12-03 DOI: 10.1002/jbio.202500414
Precious Earldom Mulaudzi, Heidi Abrahamse, Anine Crous

Photobiomodulation (PBM) a promising non-invasive therapeutic technique has been proposed to have regenerative ability. There is limited understanding of PBMs effectiveness in 3D cell culture systems. To evaluate the effect of PBM at 825 nm on adipose-derived stem cells (ADSCs) cultured in 2D and 3D spheroid models. ADSCs were exposed to PBM at fluences of 5, 10, and 15 J/cm2 to assess cellular responses. Cell morphology, spheroid diameter, cell concentration, viability, proliferation, and cytotoxicity were monitored 24- and 72-h post-irradiation (hpi). In 2D cell culture, PBM at 5 J/cm2 showed a significant increase in cell viability and proliferation. Cellular cytotoxicity was higher in 2D. Spheroids maintained steady size, increased viability, and proliferation peaking at 24 hpi but remaining stable over time at 10 J/cm2. 2D cell cultures show an over expression of PBM-induced effects, while spheroids provide a more physiological and balanced response profile particularly at 10 J/cm2.

光生物调节(PBM)是一种很有前途的无创治疗技术,具有再生能力。目前对PBMs在三维细胞培养系统中的有效性了解有限。评价825 nm时PBM对2D和3D球体模型培养的脂肪源性干细胞(ADSCs)的影响。将ADSCs暴露于5、10和15 J/cm2的PBM中,以评估细胞反应。在照射后24和72小时(hpi)监测细胞形态、球体直径、细胞浓度、活力、增殖和细胞毒性。在二维细胞培养中,5 J/cm2的PBM显著提高了细胞活力和增殖能力。2D时细胞毒性增高。球体保持稳定的大小,增加了活力,增殖在24 hpi时达到峰值,但随着时间的推移在10 J/cm2时保持稳定。二维细胞培养显示出pbm诱导的过度表达效应,而球形细胞提供了更生理和平衡的反应谱,特别是在10 J/cm2时。
{"title":"Three-Dimensional Influence of Photobiomodulation on Adipose-Derived Stem Cell Behavior.","authors":"Precious Earldom Mulaudzi, Heidi Abrahamse, Anine Crous","doi":"10.1002/jbio.202500414","DOIUrl":"https://doi.org/10.1002/jbio.202500414","url":null,"abstract":"<p><p>Photobiomodulation (PBM) a promising non-invasive therapeutic technique has been proposed to have regenerative ability. There is limited understanding of PBMs effectiveness in 3D cell culture systems. To evaluate the effect of PBM at 825 nm on adipose-derived stem cells (ADSCs) cultured in 2D and 3D spheroid models. ADSCs were exposed to PBM at fluences of 5, 10, and 15 J/cm<sup>2</sup> to assess cellular responses. Cell morphology, spheroid diameter, cell concentration, viability, proliferation, and cytotoxicity were monitored 24- and 72-h post-irradiation (hpi). In 2D cell culture, PBM at 5 J/cm<sup>2</sup> showed a significant increase in cell viability and proliferation. Cellular cytotoxicity was higher in 2D. Spheroids maintained steady size, increased viability, and proliferation peaking at 24 hpi but remaining stable over time at 10 J/cm<sup>2</sup>. 2D cell cultures show an over expression of PBM-induced effects, while spheroids provide a more physiological and balanced response profile particularly at 10 J/cm<sup>2</sup>.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500414"},"PeriodicalIF":2.3,"publicationDate":"2025-12-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145673220","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biochemical Heterogeneity of Endometriosis Phenotypes Revealed by FTIR Analysis. FTIR分析揭示子宫内膜异位症表型的生化异质性。
IF 2.3 Pub Date : 2025-11-30 DOI: 10.1002/jbio.202500511
Piotr Olcha, Wiesław Paja, Michał Kępski, Krzysztof Pancerz, Bartosz Klebowski, Łukasz Nowakowski, Krzysztof Gałczyński, Joanna Depciuch

Fourier-transform infrared (FTIR) spectroscopy was used to investigate molecular differences among peritoneal, ovarian, bowel endometriosis phenotypes and control tissues. Peritoneal lesions showed the most pronounced spectral changes in CH-stretching (2800-3000 cm-1) and 1000-1500 cm-1 regions, indicating protein and lipid alterations. Bowel lesions exhibited moderate but significant deviations, particularly in protein- and nucleic acid-associated bands, while ovarian lesions displayed subtler differences with increased lipid-related CH-stretching. Principal component analysis distinguished all phenotypes from controls, with peritoneal clustering most distinct, bowel intermediate, and ovarian partially overlapping. Key discriminative regions included phosphate vibrations (1080-1100, 1240-1250 cm-1), CH2 bending (~1450 cm-1), amide I (~1650 cm-1), and amide II (~1540 cm-1). Decision tree analysis identified phenotype-specific markers: 988 cm-1 (ovarian), 1101 cm-1 (bowel), 1544 cm-1 (peritoneal). Marker intensity correlated with tumor size and clinical scores, strongest in ovarian lesions. These findings highlight phenotype-specific FTIR fingerprints, offering diagnostic and prognostic potential in endometriosis.

应用傅里叶变换红外(FTIR)光谱研究腹膜、卵巢、肠道子宫内膜异位症表型与对照组织的分子差异。腹膜病变中ch -拉伸(2800-3000 cm-1)和1000-1500 cm-1区域的光谱变化最为明显,提示蛋白和脂质改变。肠道病变表现出中度但显著的偏差,特别是在蛋白质和核酸相关波段,而卵巢病变表现出与脂质相关的ch -拉伸增加的细微差异。主成分分析将所有表型与对照组区分开来,腹膜聚类最明显,肠道居中,卵巢部分重叠。关键鉴别区包括磷酸盐振动区(1080- 1100,1240 -1250 cm-1)、CH2弯曲区(~1450 cm-1)、酰胺I区(~1650 cm-1)和酰胺II区(~1540 cm-1)。决策树分析确定了表型特异性标记:988 cm-1(卵巢),1101 cm-1(肠),1544 cm-1(腹膜)。标志物强度与肿瘤大小和临床评分相关,在卵巢病变中最强。这些发现突出了表型特异性FTIR指纹图谱,为子宫内膜异位症的诊断和预后提供了潜力。
{"title":"Biochemical Heterogeneity of Endometriosis Phenotypes Revealed by FTIR Analysis.","authors":"Piotr Olcha, Wiesław Paja, Michał Kępski, Krzysztof Pancerz, Bartosz Klebowski, Łukasz Nowakowski, Krzysztof Gałczyński, Joanna Depciuch","doi":"10.1002/jbio.202500511","DOIUrl":"https://doi.org/10.1002/jbio.202500511","url":null,"abstract":"<p><p>Fourier-transform infrared (FTIR) spectroscopy was used to investigate molecular differences among peritoneal, ovarian, bowel endometriosis phenotypes and control tissues. Peritoneal lesions showed the most pronounced spectral changes in CH-stretching (2800-3000 cm<sup>-1</sup>) and 1000-1500 cm<sup>-1</sup> regions, indicating protein and lipid alterations. Bowel lesions exhibited moderate but significant deviations, particularly in protein- and nucleic acid-associated bands, while ovarian lesions displayed subtler differences with increased lipid-related CH-stretching. Principal component analysis distinguished all phenotypes from controls, with peritoneal clustering most distinct, bowel intermediate, and ovarian partially overlapping. Key discriminative regions included phosphate vibrations (1080-1100, 1240-1250 cm<sup>-1</sup>), CH<sub>2</sub> bending (~1450 cm<sup>-1</sup>), amide I (~1650 cm<sup>-1</sup>), and amide II (~1540 cm<sup>-1</sup>). Decision tree analysis identified phenotype-specific markers: 988 cm<sup>-1</sup> (ovarian), 1101 cm<sup>-1</sup> (bowel), 1544 cm<sup>-1</sup> (peritoneal). Marker intensity correlated with tumor size and clinical scores, strongest in ovarian lesions. These findings highlight phenotype-specific FTIR fingerprints, offering diagnostic and prognostic potential in endometriosis.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500511"},"PeriodicalIF":2.3,"publicationDate":"2025-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145650621","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Designing a Multimodal Microscopic Device for Label-Free Detection of Squamous Cell Carcinoma. 鳞状细胞癌无标记多模态显微检测装置的设计。
IF 2.3 Pub Date : 2025-11-30 DOI: 10.1002/jbio.202500289
Atul Kumar, Himanshu Joshi, Gaurav Pant, Vaibhav Burathoki, Lalit Mohan Kandpal, Pramila Thapa, Dalip Singh Mehta, Deepika Mishra, Varun Surya

Squamous cell carcinoma (SCC), a common epithelial cancer, requires early identification for treatment. Our innovative multimodal microscopic system allows bright-field microscopy, autofluorescence microscopy, quantitative phase microscopy (QPM) using the transport of intensity equation (TIE), and autofluorescence spectroscopy from a single field of view (FOV). This integrated method permits morphological and biochemical analysis of unstained tissue sections without labeling. Autofluorescence imaging in well-differentiated SCC tissue was distinct from normal tissue. The same field of view autofluorescence spectra showed a considerable increase in emission intensity at 550 nm, indicating pathological changes. It eliminates the need for dyes by using endogenous fluorophores to contrast healthy, dysplasia, and cancerous oral tissues. The autofluorescence spectroscopy method instantly collects emission spectra, quantifying metabolic changes linked with cancer progression. QPM improves refractive index distribution mapping sensitivity, enhancing spectral data for label-free diagnosis.

鳞状细胞癌(SCC)是一种常见的上皮性癌症,需要及早发现并进行治疗。我们创新的多模态显微系统允许从单个视场(FOV)进行亮场显微镜、自体荧光显微镜、使用强度方程(TIE)输运的定量相显微镜(QPM)和自体荧光光谱。这种综合方法允许形态学和生化分析未染色的组织切片,而不需要标记。高分化SCC组织的自体荧光成像与正常组织不同。同一视场的自体荧光光谱在550 nm处显示出明显的发射强度增加,表明病变。它通过使用内源性荧光团来对比健康、不典型增生和癌变的口腔组织,从而消除了对染料的需要。自体荧光光谱法即时收集发射光谱,量化与癌症进展相关的代谢变化。QPM提高了折射率分布映射的灵敏度,增强了无标签诊断的光谱数据。
{"title":"Designing a Multimodal Microscopic Device for Label-Free Detection of Squamous Cell Carcinoma.","authors":"Atul Kumar, Himanshu Joshi, Gaurav Pant, Vaibhav Burathoki, Lalit Mohan Kandpal, Pramila Thapa, Dalip Singh Mehta, Deepika Mishra, Varun Surya","doi":"10.1002/jbio.202500289","DOIUrl":"https://doi.org/10.1002/jbio.202500289","url":null,"abstract":"<p><p>Squamous cell carcinoma (SCC), a common epithelial cancer, requires early identification for treatment. Our innovative multimodal microscopic system allows bright-field microscopy, autofluorescence microscopy, quantitative phase microscopy (QPM) using the transport of intensity equation (TIE), and autofluorescence spectroscopy from a single field of view (FOV). This integrated method permits morphological and biochemical analysis of unstained tissue sections without labeling. Autofluorescence imaging in well-differentiated SCC tissue was distinct from normal tissue. The same field of view autofluorescence spectra showed a considerable increase in emission intensity at 550 nm, indicating pathological changes. It eliminates the need for dyes by using endogenous fluorophores to contrast healthy, dysplasia, and cancerous oral tissues. The autofluorescence spectroscopy method instantly collects emission spectra, quantifying metabolic changes linked with cancer progression. QPM improves refractive index distribution mapping sensitivity, enhancing spectral data for label-free diagnosis.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500289"},"PeriodicalIF":2.3,"publicationDate":"2025-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145650635","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Lightweight Spectral-MLP for Hyperspectral Differentiation of Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma. 轻型光谱- mlp在肝内胆管癌和肝细胞癌高光谱鉴别中的应用。
IF 2.3 Pub Date : 2025-11-30 DOI: 10.1002/jbio.202500545
Qingyuan Zhang, Hao Wang, Ying Pian, Qichao Yang, Xuping Zhang

Accurate differentiation between intrahepatic cholangiocarcinoma (ICC) and hepatocellular carcinoma (HCC) remains challenging due to overlapping imaging features. We propose a hyperspectral imaging (HSI)-based diagnostic framework using a lightweight Spectral-MLP network for label-free tumor classification. Seventy-nine liver specimens were analyzed after spectral calibration, noise-band removal, and normalization within 450-900 nm. Spectral analysis revealed distinct differences in hemoglobin-related bands (540-580 nm) and lipid/water absorption regions (760-850 nm), corresponding to vascular and stromal variations between ICC and HCC. The proposed Spectral-MLP achieved 93.6% accuracy, 93.1% sensitivity, 94.0% specificity, and an AUC of 0.965, comparable to deeper models but with higher efficiency. These findings demonstrate that hyperspectral data combined with a simple neural network can effectively distinguish ICC from HCC and suggest that the lightweight Spectral-MLP framework has the potential to provide interpretable, real-time, and clinically deployable decision support for optical pathological diagnosis.

由于重叠的影像学特征,准确区分肝内胆管癌(ICC)和肝细胞癌(HCC)仍然具有挑战性。我们提出了一个基于高光谱成像(HSI)的诊断框架,使用轻量级的光谱- mlp网络进行无标签肿瘤分类。79例肝脏标本在450-900 nm范围内进行光谱校正、去噪、归一化分析。光谱分析显示,血红蛋白相关波段(540-580 nm)和脂质/水吸收区(760-850 nm)存在明显差异,这与ICC和HCC之间的血管和基质差异相对应。该方法的准确度为93.6%,灵敏度为93.1%,特异性为94.0%,AUC为0.965,与深度模型相当,但效率更高。这些发现表明,高光谱数据结合简单的神经网络可以有效地区分ICC和HCC,并表明轻量级的光谱- mlp框架有可能为光学病理诊断提供可解释的、实时的、临床可部署的决策支持。
{"title":"Lightweight Spectral-MLP for Hyperspectral Differentiation of Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma.","authors":"Qingyuan Zhang, Hao Wang, Ying Pian, Qichao Yang, Xuping Zhang","doi":"10.1002/jbio.202500545","DOIUrl":"https://doi.org/10.1002/jbio.202500545","url":null,"abstract":"<p><p>Accurate differentiation between intrahepatic cholangiocarcinoma (ICC) and hepatocellular carcinoma (HCC) remains challenging due to overlapping imaging features. We propose a hyperspectral imaging (HSI)-based diagnostic framework using a lightweight Spectral-MLP network for label-free tumor classification. Seventy-nine liver specimens were analyzed after spectral calibration, noise-band removal, and normalization within 450-900 nm. Spectral analysis revealed distinct differences in hemoglobin-related bands (540-580 nm) and lipid/water absorption regions (760-850 nm), corresponding to vascular and stromal variations between ICC and HCC. The proposed Spectral-MLP achieved 93.6% accuracy, 93.1% sensitivity, 94.0% specificity, and an AUC of 0.965, comparable to deeper models but with higher efficiency. These findings demonstrate that hyperspectral data combined with a simple neural network can effectively distinguish ICC from HCC and suggest that the lightweight Spectral-MLP framework has the potential to provide interpretable, real-time, and clinically deployable decision support for optical pathological diagnosis.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500545"},"PeriodicalIF":2.3,"publicationDate":"2025-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145650670","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Portable Low-Cost Photobiomodulation Device Enhances Migration and Adhesion in L929 Fibroblasts: In Vitro Healing Evidence. 便携式低成本光生物调节装置增强L929成纤维细胞的迁移和粘附:体外愈合证据。
IF 2.3 Pub Date : 2025-11-30 DOI: 10.1002/jbio.202500517
Rebeca Barbosa da Rocha, Rodrigo Elísio de Sá, Renato Dias Dos Santos, Fabrício Dos Santos Machado, Wilson Rosas de Vasconcelos-Neto, Fuad Ahmad Hazime, Ana Jérsia Araújo, Vinicius Saura Cardoso, José Delano Barreto Marinho-Filho

Photobiomodulation shows promise in modulating complex mechanisms of chronic wound healing. Current photobiomodulation devices remain costly and technically demanding. Therefore, this study reports the development of a simple, portable and operationally and easy-to-use LED-based photobiomodulation device for the treatment of skin lesions. The design and operating parameters confirmed the device's safety and energy efficiency. In vitro LED irradiation on fibroblasts increased cell viability, without inducing proliferation. The treatment prevented cellular shrinkage, as evidenced by a higher number of smaller cells in the control group. Irradiation also enhanced cell migration at 72 and 96 h after treatment. Significantly increased adhesion to fibronectin was observed in the irradiated group, with no effect on type I collagen adhesion. Nevertheless, no significant differences were observed in the proportion of cells in the sub-G0/G1, G0/G1, S, and G2/M phases of the cell cycle. In conclusion, the LED device provides a reliable source of electromagnetic stimulation with healing effects.

光生物调节在调节复杂的慢性伤口愈合机制方面显示出前景。目前的光生物调节装置仍然昂贵且技术要求高。因此,本研究报告了一种简单、便携、操作方便、易于使用的基于led的光生物调节装置的开发,用于治疗皮肤病变。设计和运行参数证实了该装置的安全性和能效。体外LED照射成纤维细胞可提高细胞活力,但不诱导增殖。治疗阻止了细胞萎缩,正如对照组中更多的小细胞所证明的那样。在处理后72和96 h,辐照也增强了细胞的迁移。照射组对纤维连接蛋白的粘附明显增加,对I型胶原的粘附无影响。然而,在细胞周期的亚G0/G1期、G0/G1期、S期和G2/M期的细胞比例没有观察到显著差异。综上所述,该LED器件提供了具有愈合效果的可靠电磁刺激源。
{"title":"Portable Low-Cost Photobiomodulation Device Enhances Migration and Adhesion in L929 Fibroblasts: In Vitro Healing Evidence.","authors":"Rebeca Barbosa da Rocha, Rodrigo Elísio de Sá, Renato Dias Dos Santos, Fabrício Dos Santos Machado, Wilson Rosas de Vasconcelos-Neto, Fuad Ahmad Hazime, Ana Jérsia Araújo, Vinicius Saura Cardoso, José Delano Barreto Marinho-Filho","doi":"10.1002/jbio.202500517","DOIUrl":"https://doi.org/10.1002/jbio.202500517","url":null,"abstract":"<p><p>Photobiomodulation shows promise in modulating complex mechanisms of chronic wound healing. Current photobiomodulation devices remain costly and technically demanding. Therefore, this study reports the development of a simple, portable and operationally and easy-to-use LED-based photobiomodulation device for the treatment of skin lesions. The design and operating parameters confirmed the device's safety and energy efficiency. In vitro LED irradiation on fibroblasts increased cell viability, without inducing proliferation. The treatment prevented cellular shrinkage, as evidenced by a higher number of smaller cells in the control group. Irradiation also enhanced cell migration at 72 and 96 h after treatment. Significantly increased adhesion to fibronectin was observed in the irradiated group, with no effect on type I collagen adhesion. Nevertheless, no significant differences were observed in the proportion of cells in the sub-G0/G1, G0/G1, S, and G2/M phases of the cell cycle. In conclusion, the LED device provides a reliable source of electromagnetic stimulation with healing effects.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500517"},"PeriodicalIF":2.3,"publicationDate":"2025-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145650641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Profiling Protein Citrullination in Extracellular Vesicles by Single-Molecule Detection Using Direct Stochastic Optical Reconstruction Microscopy. 用直接随机光学重建显微镜单分子检测分析细胞外囊泡中的瓜氨酸化蛋白。
IF 2.3 Pub Date : 2025-11-27 DOI: 10.1002/jbio.202500483
Sarah R Needham, Benjamin M Davis, Pinar Uysal-Onganer, Daniel J Rolfe, Mariya Hristova, Igor Kraev, Jameel M Inal, Sigrun Lange

Extracellular vesicles (EVs) are critical in cellular communication and pathological biomarkers. Post-translationally deiminated/citrullinated proteins are reported in EV cargoes by LC-MS/MS but it is unknown in which EV sub-types they are exported, as part of EVs' intraluminal cargo or on the EV surface. Here, dSTORM super-resolution microscopy is used to co-localise total citrullinated proteins (pan-Cit), and citrullinated histone H3 (CitH3) to EV subtypes of three cancer cell lines, captured by tetraspanin trio (TT) or phosphatidylserine (PS). Permeabilised and non-permeabilised EVs are analysed with a Bayesian framework using beta-distributed posteriors for binomial outcomes. Pan-Cit and CitH3 labelling is confirmed in EVs as intraluminal cargo and on the EV surface, with higher levels detected in the permeabilized EVs. Pan-Cit staining is higher in TT-bound EVs, but CitH3 staining higher in PS-bound EVs. This study expands the landscape of EV-associated post-translational modifications with translational potential for EV-citrullinome based liquid biopsy tools.

细胞外囊泡(EVs)在细胞通讯和病理生物标志物中至关重要。LC-MS/MS报告了电动汽车货物中的翻译后去甲基化/瓜氨酸化蛋白,但尚不清楚它们是作为电动汽车腔内货物的一部分或在电动汽车表面出口的电动汽车亚型。在这里,使用dSTORM超分辨率显微镜将总瓜氨酸蛋白(pan-Cit)和瓜氨酸组蛋白H3 (CitH3)共定位到三种癌细胞系的EV亚型上,通过四葡氨酸三联体(TT)或磷脂酰丝氨酸(PS)捕获。渗透性和非渗透性电动汽车分析与贝叶斯框架使用β分布后验二项结果。Pan-Cit和CitH3标记在电动汽车中被证实为腔内货物和电动汽车表面,在渗透性电动汽车中检测到的水平更高。tt结合ev的Pan-Cit染色较高,而ps结合ev的CitH3染色较高。这项研究扩大了ev相关的翻译后修饰的前景,并为ev -瓜氨酸组为基础的液体活检工具提供了翻译潜力。
{"title":"Profiling Protein Citrullination in Extracellular Vesicles by Single-Molecule Detection Using Direct Stochastic Optical Reconstruction Microscopy.","authors":"Sarah R Needham, Benjamin M Davis, Pinar Uysal-Onganer, Daniel J Rolfe, Mariya Hristova, Igor Kraev, Jameel M Inal, Sigrun Lange","doi":"10.1002/jbio.202500483","DOIUrl":"https://doi.org/10.1002/jbio.202500483","url":null,"abstract":"<p><p>Extracellular vesicles (EVs) are critical in cellular communication and pathological biomarkers. Post-translationally deiminated/citrullinated proteins are reported in EV cargoes by LC-MS/MS but it is unknown in which EV sub-types they are exported, as part of EVs' intraluminal cargo or on the EV surface. Here, dSTORM super-resolution microscopy is used to co-localise total citrullinated proteins (pan-Cit), and citrullinated histone H3 (CitH3) to EV subtypes of three cancer cell lines, captured by tetraspanin trio (TT) or phosphatidylserine (PS). Permeabilised and non-permeabilised EVs are analysed with a Bayesian framework using beta-distributed posteriors for binomial outcomes. Pan-Cit and CitH3 labelling is confirmed in EVs as intraluminal cargo and on the EV surface, with higher levels detected in the permeabilized EVs. Pan-Cit staining is higher in TT-bound EVs, but CitH3 staining higher in PS-bound EVs. This study expands the landscape of EV-associated post-translational modifications with translational potential for EV-citrullinome based liquid biopsy tools.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500483"},"PeriodicalIF":2.3,"publicationDate":"2025-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145644128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Quantitative Assessment of Basement Membrane Loss in Melasma Using Attenuation Coefficient Estimation Based on Optical Coherence Tomography. 基于光学相干层析成像的衰减系数估计定量评估黄褐斑基底膜损失。
IF 2.3 Pub Date : 2025-11-26 DOI: 10.1002/jbio.202500491
Jingwen Liang, Xinyuan Cao, Ke Li, Tingting Zhu, Jianhua Mo

Melasma is a common pigmentary disorder involving melanin deposition and structural alterations. Current diagnostic methods mainly target pigmentation and lack real-time assessment of histopathology. This study proposes a noninvasive, quantitative evaluation of basement membrane (BM) disruption in melasma using optical coherence tomography (OCT) with deep learning. Cross-sectional skin images were generated by attenuation coefficient (AC) mapping of OCT B-scans. An improved Unet (Res-Att-Unet), integrating residual and attention modules, was developed for BM segmentation. AC mapping enhanced image contrast, yielding superior BM segmentation over conventional OCT. The proposed model achieved an accuracy of 81.4%, F1-score of 83.8%, and IoU of 72.1%. BM loss in melasma (66.0% ± 19.8%) was significantly higher than in perilesional skin (47.2% ± 18.5%, p < 0.001). Longitudinal monitoring revealed a significant BM recovery after tranexamic acid (TXA) treatment. These results indicate that our proposed method can be potentially used in clinic for in vivo BM assessment, aiding in melasma diagnosis.

黄褐斑是一种常见的色素紊乱,涉及黑色素沉积和结构改变。目前的诊断方法主要针对色素沉着,缺乏组织病理学的实时评估。本研究提出了一种基于深度学习的光学相干断层扫描(OCT)的无创、定量评估黄褐斑基底膜(BM)破坏的方法。通过衰减系数(AC)映射生成OCT b扫描的横截面皮肤图像。结合残差和注意力模块,开发了一种改进的Unet (res - at -Unet)用于BM分割。与传统oct相比,AC映射增强了图像对比度,产生了更好的BM分割。该模型的准确率为81.4%,f1得分为83.8%,IoU为72.1%。黄褐斑的BM损失(66.0%±19.8%)显著高于病灶周围(47.2%±18.5%)
{"title":"Quantitative Assessment of Basement Membrane Loss in Melasma Using Attenuation Coefficient Estimation Based on Optical Coherence Tomography.","authors":"Jingwen Liang, Xinyuan Cao, Ke Li, Tingting Zhu, Jianhua Mo","doi":"10.1002/jbio.202500491","DOIUrl":"https://doi.org/10.1002/jbio.202500491","url":null,"abstract":"<p><p>Melasma is a common pigmentary disorder involving melanin deposition and structural alterations. Current diagnostic methods mainly target pigmentation and lack real-time assessment of histopathology. This study proposes a noninvasive, quantitative evaluation of basement membrane (BM) disruption in melasma using optical coherence tomography (OCT) with deep learning. Cross-sectional skin images were generated by attenuation coefficient (AC) mapping of OCT B-scans. An improved Unet (Res-Att-Unet), integrating residual and attention modules, was developed for BM segmentation. AC mapping enhanced image contrast, yielding superior BM segmentation over conventional OCT. The proposed model achieved an accuracy of 81.4%, F1-score of 83.8%, and IoU of 72.1%. BM loss in melasma (66.0% ± 19.8%) was significantly higher than in perilesional skin (47.2% ± 18.5%, p < 0.001). Longitudinal monitoring revealed a significant BM recovery after tranexamic acid (TXA) treatment. These results indicate that our proposed method can be potentially used in clinic for in vivo BM assessment, aiding in melasma diagnosis.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500491"},"PeriodicalIF":2.3,"publicationDate":"2025-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145644094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Plasmonics-Enhanced Characterization of Cervid PrP (87-114) Fragment Aggregates in Solution. 等离子体增强表征Cervid PrP(87-114)碎片聚集体在溶液中。
IF 2.3 Pub Date : 2025-11-26 DOI: 10.1002/jbio.202500428
Shinki Midha, Aishwarya Sriraman, Lyudmyla Dorosh, Holger Wille, Maria Stepanova

We performed a multimodal characterisation of self-assembled fibrillar aggregates formed by the residue 87-114 fragment of the white-tailed deer (WTD) prion protein (PrP), a disease-relevant region implicated in the structural conversion and transmission of chronic wasting disease (CWD) in cervids. Using an integrated experimental platform combining plasmon-enhanced bright-field microscopy, label-free surface-enhanced Raman spectroscopy (SERS), and Thioflavin T staining, we probed peptide aggregation in solution under ambient conditions. Nanostructured gold films on dielectric fused silica supports served as dual-purpose plasmonic substrates for imaging and SERS. We observed a transition from dispersed states to well-defined fibrillar networks, accompanied by spectral evolution in key backbone-sensitive SERS bands. These results establish the amide III region and tryptophan vibrational features as indicators of fibrillar architecture in SERS assays and offer new insights into the aggregation behavior of amyloidogenic sequences involved in CWD susceptibility.

我们对白尾鹿(WTD)朊蛋白(PrP)残基87-114片段形成的自组装纤维聚集体进行了多模式表征,PrP是一个与动物慢性消耗性疾病(CWD)的结构转化和传播有关的疾病相关区域。利用等离子体增强亮场显微镜、无标记表面增强拉曼光谱(SERS)和硫黄酮T染色相结合的综合实验平台,我们在环境条件下探测了溶液中的肽聚集。介质熔融二氧化硅支撑的纳米结构金薄膜作为成像和SERS的双用途等离子体衬底。我们观察到从分散状态到明确定义的纤维网络的转变,伴随着关键骨干敏感SERS波段的光谱演变。这些结果建立了酰胺III区和色氨酸振动特征作为SERS分析中纤维结构的指标,并为CWD易感性中淀粉样蛋白序列的聚集行为提供了新的见解。
{"title":"Plasmonics-Enhanced Characterization of Cervid PrP (87-114) Fragment Aggregates in Solution.","authors":"Shinki Midha, Aishwarya Sriraman, Lyudmyla Dorosh, Holger Wille, Maria Stepanova","doi":"10.1002/jbio.202500428","DOIUrl":"https://doi.org/10.1002/jbio.202500428","url":null,"abstract":"<p><p>We performed a multimodal characterisation of self-assembled fibrillar aggregates formed by the residue 87-114 fragment of the white-tailed deer (WTD) prion protein (PrP), a disease-relevant region implicated in the structural conversion and transmission of chronic wasting disease (CWD) in cervids. Using an integrated experimental platform combining plasmon-enhanced bright-field microscopy, label-free surface-enhanced Raman spectroscopy (SERS), and Thioflavin T staining, we probed peptide aggregation in solution under ambient conditions. Nanostructured gold films on dielectric fused silica supports served as dual-purpose plasmonic substrates for imaging and SERS. We observed a transition from dispersed states to well-defined fibrillar networks, accompanied by spectral evolution in key backbone-sensitive SERS bands. These results establish the amide III region and tryptophan vibrational features as indicators of fibrillar architecture in SERS assays and offer new insights into the aggregation behavior of amyloidogenic sequences involved in CWD susceptibility.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500428"},"PeriodicalIF":2.3,"publicationDate":"2025-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145608074","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rapid Identification and Characterization of Pathogenic Bacteria Isolates Using Fluorescence Excitation Spectroscopy and Spectral Deconvolution. 利用荧光激发光谱和光谱反褶积快速鉴定和鉴定病原菌分离物。
IF 2.3 Pub Date : 2025-11-24 DOI: 10.1002/jbio.202500408
Anandh Sundaramoorthy, Bharanidharan Ganesan, Aruna Prakasarao, Singaravelu Ganesan

Bacterial detection and identification are crucial tasks in today's world due to increasing casualties and severity caused by bacteria in hospital-acquired infections, food-borne infections, etc. This warrants an urgent need for rapid detection and identification of different bacterial strains. Fluorescence spectroscopy is a widely used technique for bacteria characterization owing to its high sensitivity, real-time, and simple measurement capabilities. In this work, fluorescence excitation spectra of 200 bacteria isolates belonging to eight different species were acquired under identical conditions with 25 isolates per species. The fluorescence excitation spectra were subjected to spectral deconvolution to extract four Gaussian components viz., tryptophan in protein under buried and exposed conditions, nucleic acids and anthranilic acid. Linear discriminant analysis applied to normalized fluorescence excitation spectra of 200 samples classified the bacterial strains with 100% accuracy using leave-one-out cross-validation.

由于细菌在医院获得性感染、食源性感染等方面造成的伤亡和严重程度不断增加,细菌检测和鉴定是当今世界的重要任务。因此,迫切需要对不同菌株进行快速检测和鉴定。荧光光谱技术由于其高灵敏度、实时性和简单的测量能力而被广泛应用于细菌表征。在相同的条件下,获得了8个不同菌种的200株细菌的荧光激发光谱,每个菌种25株。对荧光激发光谱进行光谱反褶积,提取埋地和暴露条件下蛋白质中的色氨酸、核酸和邻氨基苯酸四个高斯分量。对200个样品的归一化荧光激发光谱进行线性判别分析,采用留一交叉验证法对菌株进行分类,准确率为100%。
{"title":"Rapid Identification and Characterization of Pathogenic Bacteria Isolates Using Fluorescence Excitation Spectroscopy and Spectral Deconvolution.","authors":"Anandh Sundaramoorthy, Bharanidharan Ganesan, Aruna Prakasarao, Singaravelu Ganesan","doi":"10.1002/jbio.202500408","DOIUrl":"https://doi.org/10.1002/jbio.202500408","url":null,"abstract":"<p><p>Bacterial detection and identification are crucial tasks in today's world due to increasing casualties and severity caused by bacteria in hospital-acquired infections, food-borne infections, etc. This warrants an urgent need for rapid detection and identification of different bacterial strains. Fluorescence spectroscopy is a widely used technique for bacteria characterization owing to its high sensitivity, real-time, and simple measurement capabilities. In this work, fluorescence excitation spectra of 200 bacteria isolates belonging to eight different species were acquired under identical conditions with 25 isolates per species. The fluorescence excitation spectra were subjected to spectral deconvolution to extract four Gaussian components viz., tryptophan in protein under buried and exposed conditions, nucleic acids and anthranilic acid. Linear discriminant analysis applied to normalized fluorescence excitation spectra of 200 samples classified the bacterial strains with 100% accuracy using leave-one-out cross-validation.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500408"},"PeriodicalIF":2.3,"publicationDate":"2025-11-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145598540","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Biological Effects of Intense Terahertz Waves at 2.88 THz on Breast Cancer and Melanoma Cells. 2.88太赫兹强太赫兹波对乳腺癌和黑色素瘤细胞的生物学效应。
IF 2.3 Pub Date : 2025-11-21 DOI: 10.1002/jbio.202500307
Chengbin Zhao, Huan Zhou, Xiao-Yu Peng, Weijun Wang, Peng Zhang, Jie Liu, Peng Li, Xianqin Luo, Biyong Ren, De-Sheng Pei

Current research has shown that terahertz (THz) waves can induce some bioeffects on certain human tumor cells. These effects are significant for potential applications in future tumor treatments. However, there are limited reports on the research advancements in this field, likely due to the scarcity of powerful THz sources. Here, we preliminarily report biological effects on breast cancer and melanoma cells using a powerful THz source at 2.88 THz from a THz free-electron laser. We observed obvious morphological changes, especially the early apoptotic phenomena, in both cancer cells. Flow cytometry results further confirmed that some cancer cells had undergone early apoptosis. An evaluation of the thermal effects suggests that the apoptosis observed in both cancer cells could be mainly attributed to the non-thermal effects induced by the strong THz waves. Our findings indicate the potential for utilizing strong THz waves in non-inflammatory cancer treatment in the future.

目前的研究表明,太赫兹(THz)波可以对某些人类肿瘤细胞产生一些生物效应。这些效应对未来肿瘤治疗的潜在应用具有重要意义。然而,关于这一领域的研究进展的报道有限,可能是由于强大太赫兹源的缺乏。在这里,我们初步报道了使用来自太赫兹自由电子激光器的2.88太赫兹强太赫兹源对乳腺癌和黑色素瘤细胞的生物学效应。两种肿瘤细胞均有明显的形态学改变,尤其是早期凋亡现象。流式细胞术结果进一步证实部分癌细胞发生了早期凋亡。热效应的评价表明,两种肿瘤细胞的凋亡可能主要归因于强太赫兹波诱导的非热效应。我们的研究结果表明,未来在非炎症性癌症治疗中利用强太赫兹波的潜力。
{"title":"Biological Effects of Intense Terahertz Waves at 2.88 THz on Breast Cancer and Melanoma Cells.","authors":"Chengbin Zhao, Huan Zhou, Xiao-Yu Peng, Weijun Wang, Peng Zhang, Jie Liu, Peng Li, Xianqin Luo, Biyong Ren, De-Sheng Pei","doi":"10.1002/jbio.202500307","DOIUrl":"https://doi.org/10.1002/jbio.202500307","url":null,"abstract":"<p><p>Current research has shown that terahertz (THz) waves can induce some bioeffects on certain human tumor cells. These effects are significant for potential applications in future tumor treatments. However, there are limited reports on the research advancements in this field, likely due to the scarcity of powerful THz sources. Here, we preliminarily report biological effects on breast cancer and melanoma cells using a powerful THz source at 2.88 THz from a THz free-electron laser. We observed obvious morphological changes, especially the early apoptotic phenomena, in both cancer cells. Flow cytometry results further confirmed that some cancer cells had undergone early apoptosis. An evaluation of the thermal effects suggests that the apoptosis observed in both cancer cells could be mainly attributed to the non-thermal effects induced by the strong THz waves. Our findings indicate the potential for utilizing strong THz waves in non-inflammatory cancer treatment in the future.</p>","PeriodicalId":94068,"journal":{"name":"Journal of biophotonics","volume":" ","pages":"e202500307"},"PeriodicalIF":2.3,"publicationDate":"2025-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145575154","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of biophotonics
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1