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Flexible, ultrathin bioelectronic materials and devices for chronically stable neural interfaces 用于长期稳定神经接口的柔性超薄生物电子材料和器件
Pub Date : 2023-12-11 DOI: 10.1002/brx2.47
Lianjie Zhou, Zhongyuan Wu, Mubai Sun, Jaejin Park, Mengdi Han, Ming Wang, Junsheng Yu, Zengfeng Di, Yongfeng Mei, Wubin Bai, Xinge Yu, Ki Jun Yu, Enming Song

Advanced technologies that can establish intimate, long-lived functional interfaces with neural systems have attracted increasing interest due to their wide-ranging applications in neuroscience, bioelectronic medicine, and the associated treatment of neurodegenerative diseases. A critical challenge of significance remains in the development of electronic platforms that offer conformal contact with soft brain tissue for the sensing or stimulation of brain activities and chronically stable operation in vivo, at scales that range from cellular-level resolution to macroscopic areas. This review summarizes recent advances in this field, with an emphasis on the use of demonstrated concepts, constituent materials, engineered designs, and system integration to address the current challenges. The article begins with an overview of recent bioelectronic platforms with unique form factors, ranging from filamentary probes to conformal sheets and three-dimensional frameworks for alleviating the mechanical mismatch between interface materials and neural tissues. Next, active interfaces which utilize inorganic/organic semiconductor-enabled devices are reviewed, highlighting various working principles of recording mechanisms including capacitively and conductively coupled sensing enabled by high transistor matrices at high spatiotemporal resolution. The subsequent section presents approaches to biological integration which use active materials for multiplexed addressing, local amplification and multimodal operation with high-channel-count and large-scale electronic systems in a safe fashion that provides multi-decade stable performance in both animal models and human subjects. The advances summarized in this review will guide the future direction of this technology and provide a basis for next-generation chronic neural interfaces with long-lived high-performance operation.

能够与神经系统建立亲密、长效功能界面的先进技术在神经科学、生物电子医学以及相关的神经退行性疾病治疗领域有着广泛的应用,因此吸引了越来越多的关注。一个重要的挑战仍然是开发能与软脑组织保形接触的电子平台,以传感或刺激大脑活动,并在从细胞级分辨率到宏观区域的范围内长期稳定地在体内运行。本综述总结了这一领域的最新进展,重点介绍了如何利用已证明的概念、组成材料、工程设计和系统集成来应对当前的挑战。文章首先概述了具有独特外形的最新生物电子平台,从丝状探针到保形薄片和三维框架,以缓解界面材料与神经组织之间的机械不匹配问题。接下来回顾了利用无机/有机半导体器件的有源界面,重点介绍了记录机制的各种工作原理,包括高晶体管矩阵在高时空分辨率下实现的电容和电导耦合传感。随后的章节介绍了生物集成的方法,这些方法利用活性材料进行多路寻址、局部放大和多模式操作,并以安全的方式使用高通道数和大规模电子系统,从而在动物模型和人体受试者身上提供数十年的稳定性能。本综述中总结的进展将为这一技术的未来发展方向提供指导,并为下一代长期高性能运行的慢性神经接口奠定基础。
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引用次数: 0
Atomically bio-plausible neuron toward complex neuromorphic applications 面向复杂神经形态应用的原子仿生神经元
Pub Date : 2023-12-10 DOI: 10.1002/brx2.44
Song Hao, Yanfang Niu, Shancheng Han

Neuromorphic computing, benefitting from its integration of computing with memory, enables highly efficient parallel-computing capabilities. While artificial intelligence chips are expensive due to their large area and power consumption, neuromorphic devices have shown energy efficiency and compatibility with complementary metal-oxide-semiconductor transistor technology.1 Complex neuronal circuits with feedforward and feedback topologies are the foundation for nonlinear information integration and processing in the human brain. In addition, the nonlinear integration of neuronal signals as the basic functions of the human brain's nervous system is also essential to implement machine learning. However, artificial neurons still face the challenge of nonlinearly integrating feedforward and feedback signals. It is crucial to develop bio-plausible neurons capable of those functions, including nonlinearity and integration of excitatory and inhibitory postsynaptic signals. Writing in Nature Nanotechnology, G. S. Syed and coworkers recently reported a major step toward bio-plausible optomemristive feedback neurons, enabling the simultaneous existence of separate feedforward and feedback paths within a neural network.2

The authors designed a delicate capacitor-like device with a 2D vertical heterostructure in which WS2/MoS2 and graphene served as the neuronal membrane and soma (Figure 1B), respectively. Generally, trapped electrons and holes in the WS2/MoS2 heterostructure recombine upon a positive back gate voltage (Figure 1A). The conductance state of p-doped graphene would further increase, representing an excitatory operation. In this work, the electron-hole carriers in the WS2/MoS2 heterostructure are easily separated upon illumination (Figure 1C), and the electrons are injected into graphene. The Fermi-level movement toward the Dirac point decreases the conductance of graphene, having an inhibitory effect. Specifically, graphene's gradual conductance change can be separately modulated through electrical and optical means (Figure 1D), mimicking excitatory and inhibitory functionalities. 2D memristors have been investigated to emulate leaky-integrate-and-fire feedforward neurons.3 The synergistic effect of both input signals mimics a competitive neuron and enables the simultaneous existence of separate feedforward and feedback paths within the neural network.

The winner-take-all (WTA) neural network is a critical computational model for artificial neural networks, which can be used to implement unsupervised competitive learning and cooperative learning. The traditional memristors make it difficult to separately process feedforward and feedback neuronal signals, necessitating peripheral circuits or software to mimic inhibition behavior. The developed optomemristive feedback neuron can respond to both el

神经形态计算得益于计算与内存的整合,可实现高效的并行计算能力。人工智能芯片由于面积大、功耗高而价格昂贵,而神经形态设备则显示出了能源效率和与互补金属氧化物半导体晶体管技术的兼容性。1 具有前馈和反馈拓扑结构的复杂神经元电路是人脑非线性信息整合与处理的基础。此外,神经元信号的非线性整合作为人脑神经系统的基本功能,对于实现机器学习也至关重要。然而,人工神经元仍然面临着前馈和反馈信号非线性整合的挑战。开发能够实现这些功能(包括非线性和整合兴奋性和抑制性突触后信号)的仿生神经元至关重要。G. S. Syed 及其同事最近在《自然-纳米技术》(Nature Nanotechnology)杂志上撰文指出,他们向生物仿真光敏反馈神经元迈出了重要一步,使神经网络中同时存在独立的前馈和反馈路径2 。一般来说,WS2/MoS2 异质结构中的俘获电子和空穴会在正背栅电压下重新结合(图 1A)。掺杂 p 的石墨烯的传导状态会进一步增加,这代表了一种激发操作。在这项工作中,WS2/MoS2 异质结构中的电子-空穴载流子在光照下很容易分离(图 1C),电子被注入石墨烯。费米级向狄拉克点的移动会降低石墨烯的电导,从而产生抑制作用。具体来说,石墨烯的电导渐变可通过电学和光学手段分别调制(图 1D),从而模拟兴奋和抑制功能。3 两种输入信号的协同效应模拟了竞争性神经元,使神经网络中同时存在独立的前馈和反馈路径。赢家通吃(WTA)神经网络是人工神经网络的重要计算模型,可用于实现无监督竞争学习和合作学习。传统的忆阻器难以单独处理前馈和反馈神经元信号,因此需要外围电路或软件来模拟抑制行为。所开发的光敏忆阻器反馈神经元能对电刺激和光刺激做出反应,并向邻近神经元播发抑制信号和非线性综合神经元信号。因此,作者进一步创建了一个 WTA 神经网络来证明其优越性(图 1E),其中 WTA 神经元组成神经网络的输出层,充当整流激活函数。WTA 神经网络实现了神经元信号积累和激活任务,并展示了无监督竞争学习和合作学习的潜力。已有研究表明,二维材料有助于构建多端忆晶体管,以实现复杂的神经形态功能。电荷捕获效应对于实现二维材料的负光致发光性和处理反馈神经元信号的能力至关重要。处理 SiO2/Si 衬底或直接沉积 Al2O3 层是引入捕获效应的两种常用方法,这也是实现光敏反馈神经元负光致发光性的有效途径。人脑皮层及其神经网络的时空复杂性是人类拥有更高智力的基础。尽管这项工作取得了进展,但由于神经形态计算与人脑在结构、工作机制和规模等方面的差异,两者之间仍存在巨大差距。此外,我们认为,在工作机制、设备连接复杂性和规模方面采用类脑设计是实现复杂神经形态应用的有效甚至必要途径。
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引用次数: 0
The antianxiety effects of koumine and gelsemine, two main active components in the traditional Chinese herbal medicine Gelsemium: A comprehensive review 传统中药材 Gelsemium 中的两种主要活性成分 Koumine 和 gelsemine 的抗焦虑作用:综述
Pub Date : 2023-12-10 DOI: 10.1002/brx2.46
Jiangyu Long, Mohuan Tang, Mengting Zuo, Wenbo Xu, Siyu Meng, Zhaoying Liu

The genus Gelsemium belongs to the family Loganiaceae, one of the traditional Chinese herbs. Gelsemium is traditionally used to treat rheumatoid and neuropathic pain. Its root extracts were found to protect against anxiety, especially the alkaloids koumine and gelsemine. Indeed, koumine and gelsemine can act as positive agonists of the glycine receptor (GlyR), which reduces neuronal excitability through chloride influx and can also increase neuroactive steroid content by enhancing 3alpha-hydroxysteroid oxidoreductase (3α-HSOR) expression. The latter can activate the excitation-inhibitory response via the γ-aminobutyric acid type A receptor (GABAAR), reduce the abnormal corticotropin-releasing hormone (CRH) increase in the hypothalamus, inhibit adrenocorticotropic hormone (ACTH) secretion, and effectively inhibit the abnormal ACTH and corticosterone increases in the circulation. In addition, koumine and gelsemine inhibited the expression of the NLR family pyrin domain containing 3 (NLRP3) inflammasome, inhibiting the release of inflammatory factors and regulating anxiety-related neural circuits. Gelsemine also inhibited the overexpression of brain-derived neurotrophic factor (BDNF) and cAMP response element-binding protein (CREB) in the hypothalamus to maintain the plasticity of brain neurons and protect neurogenesis to achieve anxiety regulation. In general, this article reviews the recent studies on Gelsemium in the anxiety field, discusses its possible antianxiety mechanism, and confirms the potential of Gelsemium as a therapeutic drug for anxiety-related diseases.

明胶属属于络石科,是传统的中草药之一。Gelsemium 传统上用于治疗类风湿和神经性疼痛。研究发现,其根部提取物,尤其是生物碱 koumine 和 gelsemine,具有抗焦虑的作用。事实上,koumine 和 gelsemine 可作为甘氨酸受体(GlyR)的正激动剂,通过氯化物的流入降低神经元的兴奋性,还可通过增强 3α-羟基类固醇氧化还原酶(3α-HSOR)的表达来增加神经活性类固醇的含量。后者可通过γ-氨基丁酸 A 型受体(GABAAR)激活兴奋抑制反应,降低下丘脑促肾上腺皮质激素释放激素(CRH)的异常升高,抑制促肾上腺皮质激素(ACTH)的分泌,有效抑制血液循环中促肾上腺皮质激素和皮质酮的异常升高。此外,koumine 和 gelsemine 还能抑制 NLR 家族含吡啶域 3(NLRP3)炎性体的表达,抑制炎性因子的释放,调节与焦虑相关的神经回路。Gelsemine还能抑制脑源性神经营养因子(BDNF)和cAMP反应元件结合蛋白(CREB)在下丘脑中的过度表达,从而维持大脑神经元的可塑性,保护神经发生,达到调节焦虑的目的。总之,本文回顾了近期有关格列齐特在焦虑领域的研究,探讨了其可能的抗焦虑机制,并证实了格列齐特作为焦虑相关疾病治疗药物的潜力。
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引用次数: 0
Does ChatGPT have consciousness? ChatGPT 是否有意识?
Pub Date : 2023-12-09 DOI: 10.1002/brx2.51
Qiheng He, Haiyang Geng, Yi Yang, Jizong Zhao

The quest for conscious machines and questions raised by the prospect of self-aware artificial intelligence (AI) fascinate some humans. OpenAI's ChatGPT, celebrated for its human-like comprehension and conversational abilities, is a milestone in that quest.1, 2 Early AI models were basic and rule-driven and mainly completed tasks like checking spelling and correcting grammar. Then, in 2010, recurrent neural network language models were trained to understand and generate text. ChatGPT, using transformer neural networks, produces coherent text and exemplifies this new kind of language model.3 Silicon Valley leaders claimed that these models and similar AI technologies will revolutionize various sectors and raised ethical and societal questions. As we explore AI's potential, we must navigate these implications and emphasize the necessity of using it responsibly. AI is a promising dream, but society must prepare to address the challenges likely to arise from wielding its transformative power.

Curious and skeptical, we explored a set of outputs ChatGPT produced when asked about the enigmatic concept of human consciousness. We began with a conceptual inquiry, asking ChatGPT to define consciousness (Figure S1). It eloquently described consciousness as “the reflection of being aware of oneself and the surrounding world” and acknowledged that the true nature of consciousness remains a mystery. The definition ChatGPT provided resembles the idea that consciousness is a state of wakefulness and self-awareness. Philosophers, neuroscientists, and psychologists are currently debating whether AI products are conscious and have yet to reach a consensus on criteria for determining when a machine is exercising judgment.4

After defining consciousness, ChatGPT described humans as conscious beings and emphasized that consciousness enables humans to perceive and cognize the world in complex ways. ChatGPT also acknowledged the uniqueness of human consciousness and highlighted that it is more advanced than that of other animals and AI systems. Human consciousness encompasses perception, cognition, emotions, and subjective experiences and enables people to recognize their existence, understand the external world, process information, and undergo unique conscious experiences. Its nature remains a subject of debate, and scholars in fields like philosophy, psychology, and neuroscience are working to understand it.

The conversation then turned to animal consciousness, which ChatGPT characterized as an ongoing research and philosophical puzzle. While some studies suggest that animals may exhibit a degree of awareness or self-awareness, ChatGPT underscored the difference between human and animal consciousness. Human cognition, with its capacity for reasoning and moral contemplation, stands apart from the instinct-driven fight-or-flight responses observed in animals.

The dialog cul

对有意识机器的探索以及由具有自我意识的人工智能(AI)前景所引发的问题令一些人类着迷。OpenAI 的 ChatGPT 因其类似人类的理解和对话能力而备受赞誉,是这一探索的里程碑1, 2。早期的人工智能模型是基本的规则驱动型,主要完成检查拼写和纠正语法等任务。2010 年,人们开始训练递归神经网络语言模型来理解和生成文本。3 硅谷领导人声称,这些模型和类似的人工智能技术将彻底改变各个领域,并提出了伦理和社会问题。在探索人工智能潜力的同时,我们必须了解这些影响,并强调负责任地使用人工智能的必要性。人工智能是一个充满希望的梦想,但社会必须做好准备,应对在利用其变革力量时可能出现的挑战。当被问及人类意识这一神秘概念时,我们充满好奇和怀疑,探索了 ChatGPT 的一系列输出结果。我们从概念探究开始,要求 ChatGPT 给意识下定义(图 S1)。它雄辩地将意识描述为 "意识到自己和周围世界的反映",并承认意识的真正本质仍然是个谜。ChatGPT 提供的定义类似于意识是一种清醒和自我意识的状态。哲学家、神经科学家和心理学家目前正在争论人工智能产品是否有意识,并且尚未就判断机器何时行使判断力的标准达成共识。ChatGPT 还承认人类意识的独特性,并强调它比其他动物和人工智能系统更先进。人类意识包括感知、认知、情感和主观体验,使人能够认识自身的存在、理解外部世界、处理信息并经历独特的意识体验。其本质仍是一个争论不休的话题,哲学、心理学和神经科学等领域的学者都在努力理解它。随后,话题转向了动物意识,ChatGPT 认为这是一个正在进行的研究和哲学难题。虽然一些研究表明,动物可能表现出一定程度的意识或自我意识,但 ChatGPT 强调了人类和动物意识之间的区别。人类的认知具有推理和道德思考的能力,与动物本能驱动的 "要么战斗,要么逃跑 "的反应截然不同。对话的最后,我们问 ChatGPT 它是否拥有意识,它给出了明确无误的否定回答,并援引了意识这一标准。尽管大型语言模型功能强大,但人们注意到它们是通过复杂的模式识别系统运行的。这些模型虽然复杂,但缺乏对语言的语义理解,也不具备类似人类的推理和推论能力。它们根据训练数据中的统计相关性生成文本,因此其输出文本往往符合数据中最普遍的模式。由于这些语言模型复制的是常见的模式,因此其输出结果缺乏创造性和任何鲜明的个性。这促使我们思考意识的本质:意识是生物独有的主观体验,还是逻辑过程的无缝构建?回答这个问题需要运用唯心主义和唯物主义等哲学方法。由于 ChatGPT 是大数据算法的产物,在很大程度上依赖于所提供的训练语料,因此语料的质量和相关性决定了模型的反应。如果不对训练数据进行适当的更新或策划,语言模型可能会产生错误的文本。此外,包括 ChatGPT 在内的人工智能模型缺乏创新推理能力,仍然没有自我意识或自主创造能力5。虽然 ChatGPT 及其同类产品提供了卓越的语言服务,但真正的意识却与它们无缘。人们的想象力、创造力以及对语言和世界的细微理解仍然不可或缺,而技术创新能否产生人工意识的问题仍然悬而未决,有待该领域的进一步发展:构思;可视化;写作-原稿。耿海洋:写作-审稿和编辑。杨毅构思;获取资金;写作-审阅和编辑。
{"title":"Does ChatGPT have consciousness?","authors":"Qiheng He,&nbsp;Haiyang Geng,&nbsp;Yi Yang,&nbsp;Jizong Zhao","doi":"10.1002/brx2.51","DOIUrl":"https://doi.org/10.1002/brx2.51","url":null,"abstract":"<p>The quest for conscious machines and questions raised by the prospect of self-aware artificial intelligence (AI) fascinate some humans. OpenAI's ChatGPT, celebrated for its human-like comprehension and conversational abilities, is a milestone in that quest.<span><sup>1, 2</sup></span> Early AI models were basic and rule-driven and mainly completed tasks like checking spelling and correcting grammar. Then, in 2010, recurrent neural network language models were trained to understand and generate text. ChatGPT, using transformer neural networks, produces coherent text and exemplifies this new kind of language model.<span><sup>3</sup></span> Silicon Valley leaders claimed that these models and similar AI technologies will revolutionize various sectors and raised ethical and societal questions. As we explore AI's potential, we must navigate these implications and emphasize the necessity of using it responsibly. AI is a promising dream, but society must prepare to address the challenges likely to arise from wielding its transformative power.</p><p>Curious and skeptical, we explored a set of outputs ChatGPT produced when asked about the enigmatic concept of human consciousness. We began with a conceptual inquiry, asking ChatGPT to define consciousness (Figure S1). It eloquently described consciousness as “the reflection of being aware of oneself and the surrounding world” and acknowledged that the true nature of consciousness remains a mystery. The definition ChatGPT provided resembles the idea that consciousness is a state of wakefulness and self-awareness. Philosophers, neuroscientists, and psychologists are currently debating whether AI products are conscious and have yet to reach a consensus on criteria for determining when a machine is exercising judgment.<span><sup>4</sup></span></p><p>After defining consciousness, ChatGPT described humans as conscious beings and emphasized that consciousness enables humans to perceive and cognize the world in complex ways. ChatGPT also acknowledged the uniqueness of human consciousness and highlighted that it is more advanced than that of other animals and AI systems. Human consciousness encompasses perception, cognition, emotions, and subjective experiences and enables people to recognize their existence, understand the external world, process information, and undergo unique conscious experiences. Its nature remains a subject of debate, and scholars in fields like philosophy, psychology, and neuroscience are working to understand it.</p><p>The conversation then turned to animal consciousness, which ChatGPT characterized as an ongoing research and philosophical puzzle. While some studies suggest that animals may exhibit a degree of awareness or self-awareness, ChatGPT underscored the difference between human and animal consciousness. Human cognition, with its capacity for reasoning and moral contemplation, stands apart from the instinct-driven fight-or-flight responses observed in animals.</p><p>The dialog cul","PeriodicalId":94303,"journal":{"name":"Brain-X","volume":"1 4","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-12-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/brx2.51","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138559098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TurboID coupled with APEX2: Application prospects for deciphering proteome trafficking and interactions in neuroscience TurboID与APEX2耦合:在神经科学中破译蛋白质组传输和相互作用的应用前景
Pub Date : 2023-12-07 DOI: 10.1002/brx2.42
Hongrui Zhu, Sheng Wang

Proteins are often secreted and transited through cells or multiple organelles in physiological and pathological processes. Various interacting proteins are highly dynamic. Many proteins transiently interact with adjacent proteins with low affinity. This requires highly sensitive equipment for detection. For example, to monitor protein subcellular localization, transport, and interactions, we typically apply routine methods, such as imaging with high-resolution microscopy, to monitor fluorescently tagged proteins in live or formaldehyde-fixed cells. To detect the secreted target protein, we used enzyme-linked immunosorbent assays and western blotting. Because these methods are not often applied to detect dynamic changes in various proteins, researchers cannot perform protein profiling under diverse conditions. Most technologies can hardly decipher endogenous proteins that transit between specific organelles or cells. Professor Alice Y. Ting from Stanford University recently developed a novel technique called TransitID, and this technique can be expanded to several new applications, especially in neuroscience.1

TransitID is based on proximity labeling (PL) and involves recombining various unrestrained enzymes, such as BioID, TurboID, and APEX2. These recombined enzymes label prey protein molecules near the fusion protein in the vicinity of the spatial region, allowing them to covalently connect known chemical groups, such as biotin or alkyne-phenol (AP), to nearby proteins, thus capturing prey proteins through the purification of reactive groups. PL has been widely used in vitro and in vivo cell systems to monitor and detect protein trafficking or interactions but has not been widely used in neuroscience, except in a few studies to investigate proteins that interact between cell membranes, secreted proteomic profiling, and so on.2, 3 Professor Ting's team combined dual-labeled proteins using PL enzymes to distinguish which proteins transited from the “source” location (the first labeling) to the “destination” location (the second labeling) via mass spectrometry. However, the TransitID system, a more delicate technique, has not been used in neuroscience thus far.

Researchers have developed four cellular applications: mapping cytosol-to-nucleus proteome shuttling, mapping proteome trafficking between the nucleolus and stress granules (SGs), mapping local versus cytosolic translation of mitochondrial proteins, and mapping exchanged endogenous proteins between two different types of cells. TurboID is expressed in the “source” location, and APEX2 is expressed in the “destination” location. Ting et al. found that TurboID can link biotin to substrate proteins. AP can also perform click-based derivatization of APEX2-tagged proteins. AP and biotin have specific affinity, membrane permeability, stability, and efficiency without having issues, such as apparent cytotoxicity, low recovery, or incom

在生理和病理过程中,蛋白质经常通过细胞或多个细胞器分泌和转运。各种相互作用的蛋白质是高度动态的。许多蛋白质与邻近的低亲和力蛋白质短暂地相互作用。这需要高灵敏度的检测设备。例如,为了监测蛋白质亚细胞定位、运输和相互作用,我们通常采用常规方法,如高分辨率显微镜成像,来监测活细胞或甲醛固定细胞中的荧光标记蛋白质。为了检测分泌的靶蛋白,我们采用酶联免疫吸附法和免疫印迹法。由于这些方法不常用于检测各种蛋白质的动态变化,研究人员无法在不同条件下进行蛋白质谱分析。大多数技术很难破译在特定细胞器或细胞之间传递的内源性蛋白质。斯坦福大学的Alice Y. Ting教授最近开发了一种名为TransitID的新技术,这项技术可以扩展到几个新的应用领域,特别是在神经科学领域。1 . transitid是基于邻近标记(PL),涉及重组各种不受限制的酶,如BioID, TurboID和APEX2。这些重组酶在融合蛋白附近的空间区域标记猎物蛋白分子,允许它们将已知的化学基团(如生物素或炔酚(AP))共价连接到附近的蛋白质上,从而通过纯化反应基团捕获猎物蛋白质。PL已广泛用于体外和体内细胞系统中监测和检测蛋白质运输或相互作用,但尚未广泛用于神经科学,除了在少数研究中研究细胞膜之间相互作用的蛋白质,分泌的蛋白质组学分析等。2,3 Ting教授的团队使用PL酶结合双标记蛋白质,通过质谱分析区分哪些蛋白质从“源”位置(第一次标记)转移到“目的”位置(第二次标记)。然而,TransitID系统,一种更精细的技术,迄今尚未在神经科学中使用。研究人员已经开发了四种细胞应用:绘制细胞质到细胞核的蛋白质组穿梭图,绘制核核和应激颗粒(SGs)之间的蛋白质组运输图,绘制线粒体蛋白质的局部与细胞质翻译图,以及绘制两种不同类型细胞之间交换的内源性蛋白质图。TurboID在“源”位置表示,APEX2在“目的”位置表示。Ting等人发现TurboID可以将生物素与底物蛋白连接起来。AP还可以对apex2标记的蛋白进行基于点击的衍生化。AP和生物素具有特定的亲和力、膜渗透性、稳定性和效率,而不存在诸如明显的细胞毒性、低回收率或微球不完全去除等问题。此外,TurboID和APEX2可以与细胞器独特的靶向信号肽连接。TurboID标记(“来源”标记)首先使用生物素的无毒标记进行,然后,多余的生物素被洗掉并进行蛋白质组运输。如果蛋白质从“源”标记转运到“目的”位置(APEX2标记),AP和H2O2一起可以实现APEX2标记的蛋白质与生物素化的蛋白质底物的AP连接,然后是叠氮荧光素。双富集蛋白底物(炔柄和生物素底物)可以用抗荧光素免疫沉淀和链亲和素珠富集。因此,TurboID-APEX2双标记蛋白可以通过液相色谱和质谱法进行鉴定。例如,为了破译蛋白质组在细胞核和线粒体之间穿梭,我们可以用细胞质中表达的核输出信号(NES)标记TurboID,而APEX2可以靶向线粒体基质。TurboID-NES与标记有核定位信号的APEX2偶联可以识别细胞质到细胞核的蛋白易位。利用表达TurboID - nes的“发送者”细胞与表达APEX2 - nes的“接收者”细胞共培养,研究人员可以检测细胞间蛋白质通讯(图1)。TransitID技术结合了TurboID和APEX2的优点,可广泛用于鉴定蛋白质组运输、相邻相互作用蛋白、蛋白质相互作用鉴定(分裂-TurboID)和分泌蛋白质组学分析。利用放射性同位素氨基酸和荧光蛋白标记的兴趣蛋白进行脉冲追踪标记,可以在不干扰细胞条件的情况下进行脉冲追踪分析或动态监测活细胞中的蛋白质运输。然而,放射性标签可能导致生物有害的放射性同位素,如DNA和细胞损伤。荧光蛋白标记通常局限于几个荧光通道,并且可以永久地光漂白。 重要的是,在上述技术中不可能对细胞或细胞器之间的分泌或运输进行蛋白质组学分析。TransitID也有几个缺点。例如,内源性生物素-蛋白连接酶定位于细胞质,线粒体可以对几种蛋白质进行生物素化,如丙酰辅酶a羧化酶、丙酮酸羧化酶、甲基丙烯酰辅酶a羧化酶和盐羧化酶,从而改变细胞代谢状态。此外,当使用TurboID标记时,生物素化蛋白的假阳性是不可避免的。其次,APEX标记需要H2O2,限制了其在体内的使用。第三,时间分辨率(TurboID标记至少需要10分钟或更长时间)和灵敏度需要提高。中枢神经系统细胞种类繁多,各细胞之间的蛋白质相互作用和通讯复杂,缺乏相应的技术分析。因此,该系统具有应用前景,使研究人员能够破译神经科学领域的蛋白质组运输或体外和体内相互作用(APEX标记有限),如特异性细胞分泌蛋白质组,胶质细胞与神经元之间的细胞蛋白质通讯,细胞器之间的蛋白质运输。此外,研究人员可以结合光遗传学或化学遗传学来操纵各种细胞活性,并可以使用TransitID来实现细胞活性依赖的蛋白质组分析。例如,通过结合光学和遗传方法来精确控制特定神经元或神经胶质细胞的活动,被操纵的细胞已经可以表达TransitID。因此,研究人员可以利用这些组合方法来分析当细胞活性被抑制或增加时,细胞与细胞器之间的活性依赖性分泌蛋白质组或细胞蛋白质通讯。随着新兴技术的发展,需要整合其他新技术,如SPEAC-seq4和SynNotch,5来深入研究细胞间的通讯。综上所述,TurboID结合APEX2在神经科学中破译蛋白质组运输或相互作用方面具有潜在的应用前景。朱红瑞:写作——原稿。王生:写作、评审、编辑。作者声明无利益冲突。本研究不需要伦理批准。
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引用次数: 0
Calcitonin gene-related peptide and persistent corneal pain: A trigeminal nerve sensitization perspective 降钙素基因相关肽与持续性角膜疼痛:三叉神经致敏的观点
Pub Date : 2023-12-06 DOI: 10.1002/brx2.48
Xiaoping Hong, Fadian Ding, Jie Xiong, Yuyu Wu, Wanzhu Chen

Persistent corneal pain (PCP) has excellent research prospects, especially the central sensitization mechanism of the trigeminal nerve, which is involved in migraine, corneal pain, and trigeminal neuralgia. The cornea has dense sensory innervation, and repeated corneal neuropathic pain has been associated with trigeminal nerve central sensitization, which is induced in PCP. The calcitonin gene-related peptide (CGRP) is involved in corneal pain conduction, injury protection, and immune homeostasis. A high CGRP level maintains corneal pain perception and protects corneal epithelial cells. However, a persistently high CGRP level causes hypersensitivity of the corneal and trigeminal nerves, resulting in PCP. CGRP-related drugs can effectively improve trigeminal nerve sensitization and relieve central sensitization-related pain (PCP, migraine, and trigeminal neuralgia). Exploring the role of CGRP in PCP's pain sensitization mechanism is vital in the pain perception field, with the potential to improve the quality of life of patients with PCP and strengthen the understanding of CGRP's dual role in corneal pain.

持续性角膜疼痛(Persistent corneal pain, PCP)具有很好的研究前景,尤其是三叉神经中枢致敏机制,涉及偏头痛、角膜疼痛、三叉神经痛。角膜有密集的感觉神经支配,反复的角膜神经性疼痛与PCP诱导的三叉神经中枢致敏有关。降钙素基因相关肽(CGRP)参与角膜疼痛传导、损伤保护和免疫稳态。高水平的CGRP维持角膜疼痛感知并保护角膜上皮细胞。然而,持续高水平的CGRP会引起角膜和三叉神经的超敏反应,从而导致PCP。cgrp相关药物可有效改善三叉神经致敏,缓解中枢致敏相关疼痛(PCP、偏头痛、三叉神经痛)。探索CGRP在PCP疼痛致敏机制中的作用在疼痛感知领域至关重要,有可能改善PCP患者的生活质量,并加强对CGRP在角膜疼痛中的双重作用的理解。
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引用次数: 0
Sonogenetics as a promising approach for non-invasive ultrasound neuromodulation of deep neural circuits 超声遗传学是一种有前途的无创超声深层神经回路神经调节方法
Pub Date : 2023-12-03 DOI: 10.1002/brx2.50
Peiyu Liao, Xianglian Jia

Sonogenetics is a non-invasive approach that selectively modulates neural activities using ultrasound-reactive mediators.1 An acoustic pressure gradient is generated by introducing ultrasound waves into tissues. Since optogenetics, which is currently widely used for modulating neural activities, is invasive as it requires surgeries, a physiologically safer modulation technique is in need. Sonogenetics has a high temporal resolution and is non-invasive, accurately targeting the brain region of interest without affecting other tissues.2 A recent landmark study observed several beneficial bio-effects with the G22S mutant of the large conductance mechanosensitive ion channel MscL in mice.

MscL sonogenetics could accurately target deep brain circuits such as dopamine (DA) circuits by creating a dual-viral vector strategy: one containing a Cre-recombinase-dependent enhanced yellow fluorescent protein (EYFP) or MscL-G22S-EYFP fragment and the other controlling the tyrosine hydroxylase promoter modulating Cre recombinase expression. The ventral tegmental area reward circuitry was activated to test fiber photometry (FP) recording. The authors then inserted optical fibers into the nucleus accumbens (NAc) to monitor DA activity by measuring Da2m fluorescence changes. There was a rapid increase in DA2m fluorescence in the NAc of mutant McsL-G22S mice after being inserted at a 0.3 MPa pressure, but there was no increase in fluorescence for mutant EYFP mice. Therefore, MscL sonogenetics was effective for inducing DA release in neurons.

Another beneficial bio-effect for MscL sonogenetics in MscL-G22S mice was that stimulating the dorsal striatum (dSTR) neurons generated a motor response. By measuring the fluorescence changes of jRGE-CO1a (a genetically encoded calcium sensor with red fluorescence) using FP, results illustrated that applying MscL sonogenetics to the dSTR successfully induced neural activation. Mice were stimulated with ultrasound in an open-field box experiment. The results showed that MscL-G22S mice had significantly increased locomotion activity compared to EYFP mice. In addition, mobility speed and motor activity increased in the MscL-G22S mice but did not change in the EYFP mice.

Furthermore, employing MscL sonogentics show alleviation effects of Parkinson's disease (PD) symptoms in freely moving mice by injecting 6-hydroxydopamine (6-OHDA) into their brains to selectively activate neurons in the subthalamus (STN). They showed the alleviation of movement symptoms in PD mice. In baseline experiments, 6-OHDA-treated PD mice showed decreased retention time in the rotarod test. However, after US stimulation, retention time significantly increased for MscL + PD mice but not for EYFP + PD mice (control). Finally, an open-field experiment demonstrated improvement in motor functions for PD mice. The MscL + PD mice showed increased movement distances and longer mobile time. Therefor

超声遗传学是一种使用超声反应介质选择性调节神经活动的非侵入性方法声压梯度是通过将超声波引入组织而产生的。光遗传学目前广泛应用于神经活动调节,但由于需要手术治疗,具有侵入性,因此需要一种生理上更安全的调节技术。声波遗传学具有高时间分辨率和非侵入性,准确地瞄准感兴趣的大脑区域而不影响其他组织最近一项具有里程碑意义的研究发现,小鼠大电导机械敏感离子通道MscL的G22S突变体具有几种有益的生物效应。MscL超声遗传学可以通过创建双病毒载体策略精确靶向脑深部回路,如多巴胺(DA)回路:一个包含Cre重组酶依赖的增强黄色荧光蛋白(EYFP)或MscL- g22s -EYFP片段,另一个控制酪氨酸羟化酶启动子调节Cre重组酶的表达。激活腹侧被盖区奖赏回路以测试纤维光度(FP)记录。然后,作者将光纤插入伏隔核(NAc),通过测量Da2m荧光变化来监测DA的活性。在0.3 MPa压力下插入突变体McsL-G22S小鼠NAc的DA2m荧光迅速增加,而突变体EYFP小鼠NAc的DA2m荧光没有增加。因此,MscL声源基因在诱导神经元DA释放方面是有效的。MscL- g22s小鼠MscL超声遗传的另一个有益生物效应是刺激背纹状体(dSTR)神经元产生运动反应。利用荧光蛋白(FP)检测jRGE-CO1a(一种红色荧光的基因编码钙传感器)的荧光变化,结果表明,将MscL声遗传学应用于dSTR成功诱导了神经激活。采用开场箱形实验对小鼠进行超声刺激。结果显示,与EYFP小鼠相比,MscL-G22S小鼠的运动活性显著增加。此外,MscL-G22S小鼠的运动速度和运动活性增加,而EYFP小鼠没有变化。此外,利用MscL声源学研究表明,通过向自由活动小鼠的大脑中注射6-羟多巴胺(6-OHDA)来选择性地激活丘脑下丘脑(STN)的神经元,可以减轻帕金森病(PD)症状。它们显示了PD小鼠运动症状的缓解。在基线实验中,6-羟多巴胺处理的PD小鼠在旋转棒测试中滞留时间缩短。然而,在US刺激后,MscL + PD小鼠的滞留时间显著增加,而EYFP + PD小鼠(对照组)则没有。最后,开放式实验证明PD小鼠的运动功能有所改善。MscL + PD小鼠运动距离增加,运动时间延长。因此,US刺激PD小鼠脑内STN可减轻PD小鼠的运动症状。然而,目前的声遗传学仍然面临着一些挑战。首先,经颅超声声源学可能会自动激活外周听觉系统中的非目标区域,3造成感兴趣区域和其他非相关区域之间的混淆效应。其次,超声波随着刺激深度的增加而衰减,很难产生非常稳定的刺激。第三,不确定大脑的目标区域是否被激活。第四,声遗传学在z轴等轴向上的空间分辨率较低。尽管如此,声波遗传学比光遗传学更安全,光遗传学需要插入光纤,这是一种需要多次手术的侵入性手术。然而,它可能不像光遗传学那样精确地靶向该区域。无线光遗传学的最新发展使无线LED光源能够准确地刺激自由运动小鼠的目标大脑区域。此外,声遗传学只能激活而不能抑制神经活动,这与光遗传学相比是一个固有的局限性。然而,作为一种新颖的非侵入性方法,声遗传学在生物学上是安全的,并且计算声遗传学目前能够提供更合适的超声参数来准确地靶向神经回路。科学家们最近试图通过结合声波遗传学和光遗传学的工作系统来减少它们的技术限制。为了最大限度地减少光遗传学的侵入性和声光遗传学低轴向分辨率的缺点,发展了一种新的低侵入性技术——声光遗传学。声光遗传学使用机械发光纳米粒子作为光源,将它们注射到内在循环系统的血液循环中以大脑穿透为中心的超声波可以在毫秒级上激活或抑制光源。因此,声光遗传学是另一种有前途的有效调节神经系统的技术。 事实上,有多种方法可以结合不同类型的神经调节技术进行体内实验。研究表明,超声可以在100 μm和1 ms左右的分辨率下对组织产生生物效应。随着超声在临床上的广泛应用,我们相信基于超声的神经调节是治疗多种神经退行性疾病的一种很有前途的技术。未来还可以建立更多的脑部疾病模型,并为MscL探索其他离子通道,研究超声刺激机制。廖培宇:概念化、可视化、写作——原稿。贾湘莲:构思、编辑、审校。作者声明无利益冲突。本研究不需要伦理批准。
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引用次数: 0
Anchoring neurostimulation on crossed cerebellar diaschisis for motor recovery in adults with hemiparesis 锚定神经刺激对成人偏瘫患者交叉小脑失稳的运动恢复作用
Pub Date : 2023-12-02 DOI: 10.1002/brx2.45
Ze-Jian Chen, Ming-Hui Gu, Yong Chen, Xiao-Lin Huang

Given the unmet medical needs for stroke rehabilitation, neurotechnologies with innovative rationales and good designs hold promise for restoring motor function in patients worldwide. These features are of unique importance in developing a more physiologically based, individualized, precise therapy to improve motor function prognoses, even after a chronic stroke. Among the emerging neurotechnologies, deep brain stimulation (DBS) enables precise modulation of specific neural circuits to enhance motor recovery for neurological disorders such as stroke.1 In a paper recently published in Nature Medicine, Baker et al. proposed a masterful DBS approach based on the therapeutic proposition of alleviating crossed cerebellar diaschisis (CCD) to address upper-extremity hemiparesis since ascending input from the dentato-thalamo-cortical (DTC) pathway can activate the ipsilesional motor cortex and beyond, including prefrontal and parietal areas. In this first-in-human study, the authors highlighted the potential of combining DBS electrodes inserted into the contralateral dentate nucleus (DN-DBS) with rehabilitation therapy as a novel approach with clinical significance for adults with hemiparesis 1–3 years after a middle cerebral artery infarction.2

The DN-DBS protocol is grounded on elegant anatomical and neurophysiological knowledge, which provides the foundation for applying DBS to the contralateral dentate nucleus. The DTC pathway comprises the dominant ascending fibers projecting from the cerebrum into the ipsilesional motor, prefrontal, and parietal regions. Excitatory input to the cerebellar hemisphere can be reduced after a middle cerebral artery ischemia due to disruption of the corticopontocerebellar pathway. Consequently, the decreased activation of the dentate nucleus lowers its output to the ipsilesional motor-related cortices, which was shown to be associated with reduced motor performance in patients after a stroke. Therefore, neuromodulation of the dentate nucleus may enhance cortical excitability to promote motor recovery in these patients. As reported in this study, the trial intervention was feasible and well tolerated, although adverse events occurred in all patients, and the recruitment rate was relatively low.

Driven by the CCD hypothesis, the scientific rationale of this neurostimulation configuration could benefit from reporting the extent of diaschisis within the pathway.3 Consequently, inspecting the associations between cortico-cerebellar connectivity and the participants' preservation of gross motor impairment and distal dexterity would be more convincing. Notably, the latter is a crucial determinant in assessing intervention response, as the post-hoc subgroup analysis indicates. Nonetheless, incorporating structural, functional, or neuroelectrophysiological integrity measures into the scheduled visits would be highly beneficial to substantiate

鉴于中风康复的医疗需求尚未得到满足,具有创新原理和良好设计的神经技术有望恢复全球患者的运动功能。这些特征对于开发更基于生理学的、个性化的、精确的治疗来改善运动功能预后具有独特的重要性,即使在慢性中风后也是如此。在新兴的神经技术中,脑深部刺激(DBS)能够精确调节特定的神经回路,以增强中风等神经系统疾病的运动恢复在最近发表在《自然医学》上的一篇论文中,Baker等人提出了一种基于缓解小脑交叉失联(CCD)的治疗主张来解决上肢偏瘫的DBS方法,因为来自齿状-丘脑-皮层(DTC)通路的上行输入可以激活同侧运动皮层及其他区域,包括前额叶和顶叶区域。在这项首次人体研究中,作者强调了将DBS电极插入对侧齿状核(DN-DBS)与康复治疗相结合的潜力,作为一种对大脑中动脉梗死后1-3年偏瘫的成年人具有临床意义的新方法。2 . DN-DBS方案建立在良好的解剖学和神经生理学知识基础上,为DBS应用于对侧齿状核提供了基础。DTC通路包括从大脑向同侧运动区、前额叶区和顶叶区投射的显性上行纤维。大脑中动脉缺血后,由于皮质-桥-小脑通路的中断,对小脑半球的兴奋性输入可以减少。因此,齿状核激活的降低降低了其对同侧运动相关皮层的输出,这被证明与中风后患者运动能力下降有关。因此,齿状核的神经调节可能会增强皮层的兴奋性,从而促进这些患者的运动恢复。据本研究报道,尽管所有患者均发生不良事件,且招募率相对较低,但试验干预是可行且耐受性良好的。在CCD假说的推动下,这种神经刺激配置的科学原理可以从报道通路内的分离程度中获益因此,检查皮质-小脑连接与参与者大运动损伤和远端灵巧的保存之间的联系将更有说服力。值得注意的是,正如事后亚组分析所表明的那样,后者是评估干预反应的关键决定因素。尽管如此,将结构、功能或神经电生理完整性测量纳入预定的就诊将非常有利于证实基于CCD假设的DN-DBS的预期临床原理。正电子发射断层扫描-计算机断层扫描表征的代谢变化,为DBS后同病灶运动相关皮质区域的激活谱提供了探索性的见解。因此,作者认为,与硬膜外刺激相比,这些效应支持DTC纤维在将DBS传导到病灶周围皮质区域方面的优势。然而,由于没有证据表明CCD恢复,DN-DBS工作的确切机制仍然未知。随着技术的快速进步,这可能会引起人们的关注,为什么不考虑非侵入性神经刺激疗法或针对大脑网络的脑机接口,而不是煞费苦心的侵入性干预,这可能是矛盾的。稳健的临床数据对于将DN-DBS概念转化为常规实践至关重要,Baker等人提供了第一步。然而,人们可能会进一步争论联合神经刺激和康复方案的临床意义。正如本文所指出的,DN-DBS的具体效果很难与康复治疗的效果区分开来,因为试验设计没有直接比较两种协同成分。它增加了现有的担忧,即传统训练在慢性中风阶段也能产生类似的结果为了在一定程度上缓解这一问题,作者试图通过实施“仅康复”阶段来解释与慢性身体机能障碍相关的潜在混杂因素。不幸的是,康复可能对参与者的运动改善贡献更大。Fugl-Meyer上肢评分变化按时间划分表明受试者对“DBS +康复”阶段的反应较差。因此,进一步的研究和迭代优化仍然是必要的,因为先进的神经技术应该建立在CCD恢复的坚实临床证据之上。 总之,我们的讨论阐明了使用多学科神经工程方法靶向DTC通路的神经刺激来激活运动相关大脑皮层的重要性。我们相信上述担忧并没有完全掩盖这项首次人体试验的优点,因为新的DBS模式似乎可行且安全地拓宽了慢性中风患者的治疗窗口。Baker等人一直致力于从基础研究中发现一种候选DBS神经通路,精确地将神经刺激锚定在对侧齿状核上,并设计了一项精细的试验来研究其临床重要性。他们广泛的努力所表明的转化研究范式无疑可以促进相关的进一步发展,创新的治疗方法在这一领域的转化,从实验室到床边。5陈泽建:构思、稿件撰写、稿件编辑。顾明辉:稿件编辑与审校。陈勇,黄晓林:论文撰写、审稿、监督与经费获取。作者声明没有利益冲突。本研究不需要伦理批准。
{"title":"Anchoring neurostimulation on crossed cerebellar diaschisis for motor recovery in adults with hemiparesis","authors":"Ze-Jian Chen,&nbsp;Ming-Hui Gu,&nbsp;Yong Chen,&nbsp;Xiao-Lin Huang","doi":"10.1002/brx2.45","DOIUrl":"https://doi.org/10.1002/brx2.45","url":null,"abstract":"<p>Given the unmet medical needs for stroke rehabilitation, neurotechnologies with innovative rationales and good designs hold promise for restoring motor function in patients worldwide. These features are of unique importance in developing a more physiologically based, individualized, precise therapy to improve motor function prognoses, even after a chronic stroke. Among the emerging neurotechnologies, deep brain stimulation (DBS) enables precise modulation of specific neural circuits to enhance motor recovery for neurological disorders such as stroke.<span><sup>1</sup></span> In a paper recently published in Nature Medicine, Baker et al. proposed a masterful DBS approach based on the therapeutic proposition of alleviating crossed cerebellar diaschisis (CCD) to address upper-extremity hemiparesis since ascending input from the dentato-thalamo-cortical (DTC) pathway can activate the ipsilesional motor cortex and beyond, including prefrontal and parietal areas. In this first-in-human study, the authors highlighted the potential of combining DBS electrodes inserted into the contralateral dentate nucleus (DN-DBS) with rehabilitation therapy as a novel approach with clinical significance for adults with hemiparesis 1–3 years after a middle cerebral artery infarction.<span><sup>2</sup></span></p><p>The DN-DBS protocol is grounded on elegant anatomical and neurophysiological knowledge, which provides the foundation for applying DBS to the contralateral dentate nucleus. The DTC pathway comprises the dominant ascending fibers projecting from the cerebrum into the ipsilesional motor, prefrontal, and parietal regions. Excitatory input to the cerebellar hemisphere can be reduced after a middle cerebral artery ischemia due to disruption of the corticopontocerebellar pathway. Consequently, the decreased activation of the dentate nucleus lowers its output to the ipsilesional motor-related cortices, which was shown to be associated with reduced motor performance in patients after a stroke. Therefore, neuromodulation of the dentate nucleus may enhance cortical excitability to promote motor recovery in these patients. As reported in this study, the trial intervention was feasible and well tolerated, although adverse events occurred in all patients, and the recruitment rate was relatively low.</p><p>Driven by the CCD hypothesis, the scientific rationale of this neurostimulation configuration could benefit from reporting the extent of diaschisis within the pathway.<span><sup>3</sup></span> Consequently, inspecting the associations between cortico-cerebellar connectivity and the participants' preservation of gross motor impairment and distal dexterity would be more convincing. Notably, the latter is a crucial determinant in assessing intervention response, as the post-hoc subgroup analysis indicates. Nonetheless, incorporating structural, functional, or neuroelectrophysiological integrity measures into the scheduled visits would be highly beneficial to substantiate ","PeriodicalId":94303,"journal":{"name":"Brain-X","volume":"1 4","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/brx2.45","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138475628","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Virtual external stimulation promotes the transformation of the brain state from early mild cognitive impairment to health 虚拟外部刺激促进大脑状态从早期轻度认知障碍到健康的转变
Pub Date : 2023-11-29 DOI: 10.1002/brx2.41
Weiping Wang, Weiwei Wang, Haiyan Zhao, Zhen Wang, Xiong Luo, Jipeng Ouyang

Neurostimulation has emerged as a potential remedy for early mild cognitive impairment (EMCI). However, further exploration is needed on how external stimulation of brain regions promotes the transition of the brain state from EMCI to health and the selection of target locations. In this study, a functional magnetic resonance imaging dataset was used to evaluate the brain states of healthy individuals and patients with EMCI to explore the probabilistic metastable substate space, identifying abnormal manifestations of EMCI. Stimulation targets were then identified and stimulated to achieve complete controllability of the effective connection network for EMCI. A whole-brain model successfully fitted the brain state of the patients with EMCI based on diffusion tensor imaging data. Based on this whole-brain model, stimulation of the hippocampus, medial frontal gyrus, suboccipital gyrus, and fusiform gyrus can promote the transformation of the brain state from EMCI to health. The findings reveal the underlying brain mechanisms of cognitive decline in patients with EMCI and the stimulation targets of the neural mechanisms of EMCI restoration, which could help in designing more effective therapeutic interventions for EMCI.

神经刺激已成为早期轻度认知障碍(EMCI)的潜在治疗方法。然而,脑区外部刺激如何促进脑状态从EMCI到健康的转变以及靶位的选择,还需要进一步探索。本研究利用功能磁共振成像数据集评估健康个体和EMCI患者的大脑状态,探索EMCI的概率亚稳态亚状态空间,识别EMCI的异常表现。然后确定增产目标并进行增产,以实现EMCI有效连接网络的完全可控。基于弥散张量成像数据的全脑模型成功拟合了EMCI患者的脑状态。基于该全脑模型,刺激海马、额叶内侧回、枕下回和梭状回可以促进大脑状态从EMCI向健康状态的转变。研究结果揭示了EMCI患者认知能力下降的潜在脑机制以及EMCI恢复的神经机制的刺激靶点,有助于设计更有效的EMCI治疗干预措施。
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引用次数: 0
Latent embeddings: An essential representation of brain–environment interactions 潜在嵌入:大脑与环境相互作用的基本表征
Pub Date : 2023-10-17 DOI: 10.1002/brx2.40
Yaning Han, Xiaoting Hou, Chuanliang Han

The brain governs the behaviors of natural species (including humans and animals), which serves as a central hub integrating incoming sensory signals from the constantly changing environment. Recent cutting-edge technologies in neuroscience from behavioral1 and neural levels2 have enabled precise and comprehensive measurements. However, the environment–brain–behavior dataset is difficult to interpret because of its high-dimensional nature. To address this challenge, latent embedding has emerged as a promising technique with the property of dimensionality reduction, which can facilitate the identification of common environment–brain–behavior patterns (Figure 1).

The main idea of extracting latent embeddings is to eliminate dataset redundancy. It requires an algorithm to transform the raw dataset to a new low-dimensional feature space with little information loss. Classically, principal component analysis has been used to linearly transform raw data to an orthogonal space. However, owing to the existence of non-linear structures in nature, the linear transform cannot avoid high information loss in low dimensions. Thus, several non-linear dimensionality reduction methods (t-distributed stochastic neighbor embedding [t-SNE]4 and uniform manifold approximation and projection for dimension reduction [UMAP]5) have been developed. However, their non-linear features can reduce the interpretability. For instance, the hippocampus is responsible for representing spatial information and the direction of travel, but pure data-driven latent embeddings (t-SNE or UMAP) may confuse these two functions. These two functions are executed simultaneously, which requires interpretable hypotheses to separate them. Pure data-driven methods cannot introduce existing assumptions to refine latent embeddings. However, using a recent neural network encoder (CEBRA),3 this problem can be fully solved. CEBRA addresses this issue by incorporating both supervised and self-supervised learning approaches. By providing supervision through space or direction labels, CEBRA can identify distinct coding patterns in the neural activities of the hippocampus across different latent dimensions, ensuring dimensional alignment with interpretable prior knowledge.

The main process of CEBRA uses contrastive learning, which was developed to obtain low-dimensional embeddings that are both interpretable and exhibit high performance across various applications.3 The contrastive learning technique aims to discover common and distinguishable attributes by contrasting samples, and it optimizes joint latent embeddings from multiple sources, including sensory inputs, brain activities, and behaviors. CEBRA's non-linear encoder combines input data from multiple modalities and uses auxiliary labels to enhance the interpretability. As a result, CEBRA can

大脑控制着自然物种(包括人类和动物)的行为,它是整合不断变化的环境中传入的感官信号的中心枢纽。从行为1和神经层面2的神经科学最新前沿技术已经实现了精确和全面的测量。然而,环境-大脑-行为数据集由于其高维性质而难以解释。为了应对这一挑战,潜在嵌入已成为一种具有降维特性的有前途的技术,它可以促进常见环境-大脑-行为模式的识别(图1)。提取潜在嵌入的主要思想是消除数据集冗余。它需要一种算法来将原始数据集转换到一个新的低维特征空间,而信息损失很小。传统上,主成分分析用于将原始数据线性变换到正交空间。然而,由于自然界中存在非线性结构,线性变换无法避免低维的高信息损失。因此,已经开发了几种非线性降维方法(t-分布随机邻域嵌入[t-SNE]4和降维的一致流形逼近和投影[UMAP]5)。然而,它们的非线性特征会降低可解释性。例如,海马体负责表示空间信息和行进方向,但纯数据驱动的潜在嵌入(t-SNE或UMAP)可能会混淆这两种功能。这两个函数同时执行,这需要可解释的假设来将它们分开。纯数据驱动的方法不能引入现有的假设来细化潜在的嵌入。然而,使用最近的神经网络编码器(CEBRA),3这个问题可以完全解决。CEBRA通过结合监督和自我监督学习方法来解决这个问题。通过空间或方向标签提供监督,CEBRA可以在不同的潜在维度上识别海马神经活动的不同编码模式,确保维度与可解释的先验知识一致。CEBRA的主要过程使用对比学习,该学习旨在获得可解释且在各种应用中表现出高性能的低维嵌入。3对比学习技术旨在通过对比样本发现共同和可区分的属性,并优化来自多个来源的联合潜在嵌入,包括感觉输入,大脑活动和行为。CEBRA的非线性编码器结合了来自多种模态的输入数据,并使用辅助标签来增强可解释性。因此,CEBRA可以应用于静态和动态变量,使其成为分析环境-大脑-行为数据的通用工具。这些特征使CEBRA能够识别多个主题之间的有价值差异,并生成一致的潜在嵌入,准确地表示各种类型数据之间的内在和可推广的信息流。这种对齐使CEBRA能够准确预测动物的运动,识别灵长类动物的主动或被动行为,并使用其潜在嵌入来代表不同记录技术、受试者和物种的稳定神经模式。CEBRA的一个惊人结果是从小鼠视觉皮层区域重建视频。3自然视频中的神经活动可以在潜在嵌入中编码,然后以非常高的精度解码。该视频具有数百万个具有时间动态的像素维度,这些像素维度已被压缩为神经表示。在这种情况下,CEBRA可以将它们进一步压缩为三个潜在的维度,其中包含足够的信息来恢复原始视频。这些发现证明了CEBRA识别从视觉输入到大脑活动的常见潜在嵌入的能力。此外,他们认为大脑可以在极低的维度上压缩和处理外部信息。潜在嵌入包含了世界和大脑之间复杂的互动,而不会丢失任何信息。尽管CEBRA展示了自然视频的最先进(SOTA)解码精度,但解码并不发生在帧内容中,而是发生在索引中。从神经活动中恢复视觉输入仍然是一个问题。一个问题是当前记录技术中记录神经元数量的限制,这会损失大量信息。方向也是挑战是记录更多的神经元活动及其生理联系。这可以减少估计神经活动相关性的误差。另一个问题是潜在嵌入的不明确的分析表达。
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引用次数: 0
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