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A review of short-term weather impacts on honey production. 短期天气对蜂蜜生产的影响综述。
IF 3 3区 地球科学 Q2 BIOPHYSICS Pub Date : 2025-02-01 Epub Date: 2024-12-07 DOI: 10.1007/s00484-024-02824-0
Csilla Vincze, Ádám Leelőssy, Edit Zajácz, Róbert Mészáros

Beekeeping is an exceptionally weather-sensitive agricultural field. Honey production and pollination services depend on the complex interaction of plants and bees, both of which are impacted by short-term weather changes. In this review, classical and recent research is collected to provide an overview on short-term atmospheric factors influencing honey production, and the optimal and critical weather conditions for bee activity. Bee flight can be directly obstructed by precipitation, wind, extreme temperatures and also air pollution. Bees generally fly within a temperature range of 10-40 °C, with optimal foraging efficiency occurring between 20 and 30 °C. Wind speeds exceeding 1.6-6.7 m/s can reduce foraging efficiency. Additionally, bee activity is significantly correlated with temperature, relative humidity and solar radiation, factors which influence nectar production. Optimal conditions for nectar collection typically occur in the morning and early afternoon hours with mild and moist weather. The diurnal nectar collection habit of bees adjusts to the nectar production of individual plant species. Extreme weather occurring in the sensitive hours is noticeable both in the nectar production of plants and in the activity of bees, thus in the honey yield. Understanding the impact of weather on honey bees is crucial in the management and planning of honey production. This review highlights the importance of studying these interactions to better adapt beekeeping practices to changing environmental conditions.

养蜂业是一个对天气特别敏感的农业领域。蜂蜜生产和授粉服务依赖于植物和蜜蜂之间复杂的相互作用,这两者都受到短期天气变化的影响。在这篇综述中,收集了经典和最新的研究,概述了影响蜂蜜生产的短期大气因素,以及蜜蜂活动的最佳和关键天气条件。蜜蜂的飞行会受到降水、风、极端温度和空气污染的直接阻碍。蜜蜂通常在10-40°C的温度范围内飞行,最佳觅食效率发生在20 - 30°C之间。风速超过1.6-6.7 m/s会降低觅食效率。此外,蜜蜂的活动与温度、相对湿度和太阳辐射等影响花蜜产量的因素显著相关。采集花蜜的最佳条件通常发生在温和潮湿的早晨和下午早些时候。蜜蜂每天采集花蜜的习惯适应于单个植物物种的花蜜生产。在敏感时段发生的极端天气在植物的花蜜生产和蜜蜂的活动中都是明显的,因此在蜂蜜产量中。了解天气对蜜蜂的影响对蜂蜜生产的管理和规划至关重要。这篇综述强调了研究这些相互作用以更好地适应不断变化的环境条件的养蜂实践的重要性。
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引用次数: 0
Long-term dysregulation of plasma peptidome in mild and multiple COVID-19 recovered patients revealed by a novel efficient peptidomics workflow. 一种新的高效肽组学工作流程揭示了轻度和多次COVID-19康复患者血浆肽dome的长期失调。
IF 3.8 2区 化学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-02-01 Epub Date: 2024-12-07 DOI: 10.1007/s00216-024-05684-0
Zhijing Song, Chaoran Liu, Yaozhou Liu, Zheng Bian, Qing Sun, Ting He, Rong Su, Shengchun Huang, Ningbin Dai, Ke Li Zhao, Yan Li, Kai Liang

After recovering from COVID-19, many patients experience "long COVID" symptoms. Existing research has predominantly focused on moderate to severe cases, with limited studies examining mild cases and recurrent infections. The circulating low-molecular-weight (LMW) peptidome, involving lipid metabolism, coagulation, and immune pathways, is crucial for understanding COVID-19's long-term effects. We developed a peptidomics workflow utilizing solid-phase extraction with highly wrinkled GO-Fe3O4 composite materials (HWGO-F) and nanoLC-MS/MS detection. By altering the pH, HWGO-F enhances plasma peptide adsorption and purification. Compared to traditional methods, our workflow offers improved detection depth and reproducibility for over 70% of peptide signals with CV < 20%. We investigated plasma peptide profiles in mild COVID-19 patients post-recovery from single or second infections. The findings indicate persistent abnormalities in initial COVID-19 infections' plasma peptide profiles, gradually diminishing over time. Secondary infections prolong recovery. Disrupted functions include lipid metabolism, coagulation and complement cascades, and infection-related pathways. Lipid metabolism may normalize within 3 months, while coagulation and immune abnormalities can last 3-6 months. After secondary infections, lipid metabolism irregularities may last at least 1 month, with extended coagulation and immune imbalances. These results provide a theoretical foundation for understanding the widespread occurrence of long COVID and guide recovery care for mild cases.

从COVID-19恢复后,许多患者会出现“长时间COVID”症状。现有的研究主要集中在中度至重度病例,对轻度病例和复发性感染的研究有限。循环低分子量(LMW)肽dome涉及脂质代谢、凝血和免疫途径,对于了解COVID-19的长期影响至关重要。我们开发了一种肽组学工作流程,利用高皱褶GO-Fe3O4复合材料(HWGO-F)的固相萃取和纳米lc -MS/MS检测。通过改变pH值,HWGO-F增强了血浆肽的吸附和纯化。与传统方法相比,我们的工作流程提供了更高的检测深度和可重复性,超过70%的肽信号,CV < 20%。我们研究了单次或二次感染后恢复的COVID-19轻度患者的血浆肽谱。研究结果表明,初始COVID-19感染者的血浆肽谱持续异常,随着时间的推移逐渐减少。继发感染延长康复时间。被破坏的功能包括脂质代谢、凝血和补体级联以及感染相关途径。脂质代谢可在3个月内恢复正常,而凝血和免疫异常可持续3-6个月。继发感染后,脂质代谢异常可持续至少1个月,伴凝血和免疫失衡延长。这些结果为了解长冠肺炎的广泛发生提供了理论基础,为轻症患者的康复护理提供了指导。
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引用次数: 0
Development and optimisation of the biosensor for aspartate aminotransferase blood level determination. 天冬氨酸转氨酶血药浓度测定生物传感器的研制与优化。
IF 3.8 2区 化学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-02-01 Epub Date: 2024-12-12 DOI: 10.1007/s00216-024-05682-2
Daryna Mruga, Sergei Dzyadevych, Oleksandr Soldatkin

This work presents the development and optimisation of an amperometric biosensor for determining aspartate aminotransferase (AST) activity in blood serum, using glutamate oxidase and platinum disc electrodes. AST is a key biomarker for diagnosing cardiovascular and liver diseases. The biosensor's bioselective membrane composition and formation protocol and the working solution (aspartate 8 mM, α-ketoglutarate 2 mM, pyridoxal-5-phosphate 100 µM) were optimised. The sensor demonstrated high selectivity, stability (70% retention over 2 months at - 18 °C), and sensitivity (2.37 nA min⁻1 per 10 U L⁻1), with a dynamic range of 0-500 U L⁻1 and a limit of detection of 1 U L⁻1. Comparative analysis showed the calibration curve method outperforms the standard addition method for AST measurement in serum samples. Additionally, a reference spectrophotometric technique was adapted for AST level determination, showing a strong correlation (r = 0.989) with the biosensor results. This research offers a fast, affordable, and accurate tool for early check-ups of liver and heart conditions. The biosensor's flexibility and ease of use make it suitable for further development into point-of-care testing and personalised healthcare techniques.

本研究利用谷氨酸氧化酶和铂盘电极,开发并优化了用于测定血清中天冬氨酸转氨酶(AST)活性的安培生物传感器。AST是诊断心血管和肝脏疾病的关键生物标志物。优化了生物传感器的生物选择性膜组成和形成方案以及工作溶液(天冬氨酸8 mM, α-酮戊二酸2 mM,吡哆醛-5-磷酸100µM)。该传感器表现出高选择性,稳定性(在- 18°C下2个月保持70%)和灵敏度(2.37 nA min毒血症每10 U L毒血症),动态范围为0-500 U L毒血症,检测极限为1 U L毒血症。对比分析表明,校正曲线法比标准加样法更适合于血清中AST的测定。此外,采用参考分光光度法测定AST水平,与生物传感器结果有很强的相关性(r = 0.989)。这项研究为肝脏和心脏疾病的早期检查提供了一种快速、经济、准确的工具。生物传感器的灵活性和易用性使其适合进一步发展到护理点测试和个性化医疗技术。
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引用次数: 0
Influence of hydrotherapy on change in weight: a narrative review. 水疗对体重变化的影响:叙述性综述。
IF 3 3区 地球科学 Q2 BIOPHYSICS Pub Date : 2025-02-01 Epub Date: 2024-11-15 DOI: 10.1007/s00484-024-02823-1
M Y Manju, Geetha B Shetty, K J Sujatha, Prashanth Shetty

There is a growing interest in weight loss in today's world. Environmental factors are the main contributor behind the rapidly spreading obesity during pandemic. Exercise and diet are two controllable elements that significantly effect on energy balance., The use of cold application such as cold-water immersion, cold abdominal pack, balneotherapy, cold exposure, water drinking, steam, and sauna sessions, has shown a positive impact in weight management. This review explains the mechanism and various types of hydrotherapy applications managing weight through thermogenesis and non-shivering thermogenic pathways, which involve the brown adipose tissue, and dependent on uncoupling protein 1 (UCP1) in the inner mitochondrial membrane. Hence the present literature provides insight into use of hydrotherapy applications for future direction in weight management.

当今世界,人们对减肥的兴趣与日俱增。环境因素是肥胖症迅速蔓延的主要原因。运动和饮食是两个对能量平衡有显著影响的可控因素,而冷水浸泡、腹部冷敷包、浴疗法、冷暴露、饮水、蒸汽和桑拿浴等冷敷方法的使用对体重管理有积极影响。本综述解释了通过产热和非颤抖性产热途径控制体重的机制和各种水疗应用,这些途径涉及棕色脂肪组织,并依赖于线粒体内膜中的解偶联蛋白 1(UCP1)。因此,目前的文献为水疗应用在体重管理方面的未来发展方向提供了启示。
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引用次数: 0
Medical meteorological forecast for ischemic stroke: random forest regression vs long short-term memory model. 缺血性中风的医学气象预报:随机森林回归与长短期记忆模型。
IF 3 3区 地球科学 Q2 BIOPHYSICS Pub Date : 2025-02-01 Epub Date: 2024-11-21 DOI: 10.1007/s00484-024-02818-y
Yixiu Yang, Mingjie Zhang, Jinghong Zhang, Yajie Zhang, Weining Xiong, Yipeng Ding, Shuyuan Chu, Tian Xie

Ischemic stroke (IS) is one of the top risk factors for death and disability. Meteorological conditions have an effect on IS attack. In this study, we try to develop models of medical meteorological forecast for IS attack based on machine learning and deep learning algorithms. The medical meteorological forecast would be beneficial to public health in IS events prevention and treatment. We collected data on IS attacks and climatology in each day from 18th September 2016 to 31th December 2020 in Haikou. Data on IS attacks were from the number of hospital admissions due to IS attack among general population. The random forest (RF) regression and long short-term memory (LSTM) algorithms were respectively used to develop the predictive model based on meteorological data. Performance of the model was assessed by mean squared error (MSE) and root mean squared error (RMSE). A total of 42849 IS attacks was included in this study. IS attacks were significantly decreased in winter. The pattern of climatological data was observed the regularity in seasons. For the performance of RF regression model, the MSE is 243, and the RMSE is 15.6. For LSTM model, the MSE is 36, and the RMSE is 6. In conclusion, LSTM model is more accurate than RF regression model to predict IS attacks in general population based on meteorological data. LSTM model showed acceptable accuracy for the prediction and could be used as medical meteorological forecast to predict IS attack among population according to local climate.

缺血性中风(IS)是导致死亡和残疾的首要风险因素之一。气象条件对缺血性中风的发作有影响。在这项研究中,我们尝试基于机器学习和深度学习算法开发针对 IS 攻击的医学气象预报模型。医疗气象预报将有利于公共卫生机构预防和治疗 IS 事件。我们收集了海口市2016年9月18日至2020年12月31日期间每天的IS袭击数据和气候数据。IS袭击数据来自普通人群中因IS袭击而入院的人数。在气象数据的基础上,分别使用随机森林(RF)回归和长短期记忆(LSTM)算法建立预测模型。模型的性能通过均方误差(MSE)和均方根误差(RMSE)进行评估。本研究共纳入了 42849 次 IS 袭击。结果表明,IS 在冬季明显减少。气候学数据的模式观察到了季节的规律性。RF 回归模型的 MSE 为 243,RMSE 为 15.6。总之,LSTM 模型比 RF 回归模型更准确地预测了基于气象数据的一般人群中的 IS 攻击。LSTM 模型显示了可接受的预测精度,可用作医疗气象预报,根据当地气候预测人群中的 IS 攻击。
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引用次数: 0
Navigating the maze of mass spectra: a machine-learning guide to identifying diagnostic ions in O-glycan analysis. 质谱迷宫导航:O-糖分析中识别诊断离子的机器学习指南。
IF 3.8 2区 化学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-02-01 Epub Date: 2024-08-24 DOI: 10.1007/s00216-024-05500-9
James Urban, Roman Joeres, Luc Thomès, Kristina A Thomsson, Daniel Bojar

Structural details of oligosaccharides, or glycans, often carry biological relevance, which is why they are typically elucidated using tandem mass spectrometry. Common approaches to distinguish isomers rely on diagnostic glycan fragments for annotating topologies or linkages. Diagnostic fragments are often only known informally among practitioners or stem from individual studies, with unclear validity or generalizability, causing annotation heterogeneity and hampering new analysts. Drawing on a curated set of 237,000 O-glycomics spectra, we here present a rule-based machine learning workflow to uncover quantifiably valid and generalizable diagnostic fragments. This results in fragmentation rules to robustly distinguish common O-glycan isomers for reduced glycans in negative ion mode. We envision this resource to improve glycan annotation accuracy and concomitantly make annotations more transparent and homogeneous across analysts.

低聚糖或聚糖的结构细节通常具有生物学意义,因此通常使用串联质谱法来阐明。区分异构体的常见方法依赖于用于注释拓扑或连接的诊断性聚糖片段。诊断片段往往只是从业人员之间的非正式了解,或源自个别研究,其有效性或可推广性并不明确,从而导致注释的异质性,阻碍了新分析人员的工作。我们在此介绍一种基于规则的机器学习工作流程,该流程借鉴了 237,000 个 O-糖组图谱的编辑集,以发现可量化的有效和可推广的诊断片段。这就产生了碎片规则,能在负离子模式下稳健地区分还原糖的常见 O-聚糖异构体。我们希望这一资源能提高聚糖注释的准确性,同时使不同分析师的注释更加透明和一致。
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引用次数: 0
Computational identification of potential bioactive compounds from Triphala against alcoholic liver injury by targeting alcohol dehydrogenase. 通过计算鉴定三叶草中针对酒精脱氢酶抗酒精性肝损伤的潜在生物活性化合物。
IF 3.9 2区 化学 Q2 CHEMISTRY, APPLIED Pub Date : 2025-02-01 Epub Date: 2024-05-14 DOI: 10.1007/s11030-024-10879-9
Bhavya Banjan, Rajesh Raju, Thottethodi Subrahmanya Keshava Prasad, Chandran S Abhinand

Alcoholic liver injury resulting from excessive alcohol consumption is a significant social concern. Alcohol dehydrogenase (ADH) plays a critical role in the conversion of alcohol to acetaldehyde, leading to tissue damage. The management of alcoholic liver injury encompasses nutritional support and, in severe cases liver transplantation, but potential adverse effects exist, and effective medications are currently unavailable. Natural products with their potential benefits and historical use in traditional medicine emerge as promising alternatives. Triphala, a traditional polyherbal formula demonstrates beneficial effects in addressing diverse health concerns, with a notable impact on treating alcoholic liver damage through enhanced liver metabolism. The present study aims to identify potential active phytocompounds in Triphala targeting ADH to prevent alcoholic liver injury. Screening 119 phytocompounds from the Triphala formulation revealed 62 of them showing binding affinity to the active site of the ADH1B protein. Promising lipid-like molecule from Terminalia bellirica, (4aS, 6aR, 6aR, 6bR, 7R, 8aR, 9R, 10R, 11R, 12aR, 14bS)-7, 10, 11-trihydroxy-9-(hydroxymethyl)-2, 2, 6a, 6b, 9, 12a-hexamethyl-1, 3, 4, 5, 6, 6a, 7, 8, 8a, 10, 11, 12, 13, 14b-tetradecahydropicene-4a-carboxylic acid showed high binding efficiency to a competitive ADH inhibitor, 4-Methylpyrazole. Pharmacokinetic analysis further confirmed the drug-likeness and non-hepatotoxicity of the top-ranked compound. Molecular dynamics simulation and MM-PBSA studies revealed the stability of the docked complexes with minimal fluctuation and consistency of the hydrogen bonds throughout the simulation. Together, computational investigations suggest that (4aS, 6aR, 6aR, 6bR, 7R, 8aR, 9R, 10R, 11R, 12aR, 14bS)-7, 10, 11-trihydroxy-9-(hydroxymethyl)-2, 2, 6a, 6b, 9, 12a-hexamethyl-1, 3, 4, 5, 6, 6a, 7, 8, 8a, 10, 11, 12, 13, 14b-tetradecahydropicene-4a-carboxylic acid from the Triphala formulation holds promise as an ADH inhibitor, suggesting an alternative therapy for alcoholic liver injury.

过量饮酒导致的酒精性肝损伤是一个重大的社会问题。酒精脱氢酶(ADH)在酒精转化为乙醛的过程中起着关键作用,从而导致组织损伤。酒精性肝损伤的治疗包括营养支持和严重情况下的肝移植,但存在潜在的不良影响,而且目前还没有有效的药物。天然产品具有潜在的益处,在传统医学中的使用历史悠久,是一种很有前景的替代品。Triphala 是一种传统的多草药配方,在解决各种健康问题方面显示出有益的效果,其中通过增强肝脏新陈代谢治疗酒精性肝损伤的效果显著。本研究旨在确定 Triphala 中针对 ADH 的潜在活性植物化合物,以预防酒精性肝损伤。通过对三叶草配方中的 119 种植物化合物进行筛选,发现其中 62 种化合物与 ADH1B 蛋白的活性位点具有结合亲和力。从Terminalia bellirica中提取的有希望的类脂质分子--(4aS, 6aR, 6aR, 6bR, 7R, 8aR, 9R, 10R, 11R, 12aR, 14bS)-7, 10, 11-三羟基-9-(羟甲基)-2, 2, 6a, 6b, 9、12a-hexamethyl-1, 3, 4, 5, 6, 6a, 7, 8, 8a, 10, 11, 12, 13, 14b-tetradecahydropicene-4a-carboxylic acid 与竞争性 ADH 抑制剂 4-Methylpyrazole 的结合效率很高。药代动力学分析进一步证实了排名第一的化合物的药物亲和性和无肝毒性。分子动力学模拟和 MM-PBSA 研究揭示了对接复合物的稳定性,在整个模拟过程中氢键的波动和一致性极小。计算研究结果表明,(4aS, 6aR, 6aR, 6bR, 7R, 8aR, 9R, 10R, 11R, 12aR, 14bS)-7, 10, 11-三羟基-9-(羟甲基)-2, 2, 6a, 6b, 9, 12a-六甲基-1, 3, 4, 5, 6, 6a、7、8、8a、10、11、12、13、14b-十四碳氢丙烯-4a-羧酸有望成为一种 ADH 抑制剂,为治疗酒精性肝损伤提供了一种替代疗法。
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引用次数: 0
Argonaute protein assisted drug discovery for miRNA-181c-5p and target gene ATM translation repression: a computational approach. 针对 miRNA-181c-5p 和靶基因 ATM 翻译抑制的 Argonaute 蛋白辅助药物发现:一种计算方法。
IF 3.9 2区 化学 Q2 CHEMISTRY, APPLIED Pub Date : 2025-02-01 Epub Date: 2024-07-18 DOI: 10.1007/s11030-024-10855-3
Harshita Tak, Jivanage Anirudh, Arpan Chattopadhyay, B Hemanth Naick

The miRNA binds to AGO's seed region, prompting the exploration of small molecules that can offset miRNA repression of target mRNA. This miRNA-181c-5p was found to be upregulated in the chronic traumatic encephalopathy, a prevalent neurodegenerative disease in contact sports and military personals. The research aimed to identify compounds that disrupt the AGO-assisted loop formation between miRNA-181c-5p and ATM, consequently repressing the translation of ATM. Target genes from commonly three databases (DIANA-microT-CDS, miRDB, RNA22 and TargetScan) were subjected to functional annotation and clustering analysis using DAVID bioinformatics tool. Haddock server were employed to make miRNA-181c-5p:ATM-AGO complex. A total of 2594 small molecules were screened using Glide XP based on their highest binding affinity towards the complex, through a three-phase docking approach. The top 5 compounds (DB00674-Galantamine, DB00371-Meprobamate, DB00694-Daunorubicin, DB00837-Progabide, and DB00851-Dacarbazine) were further analyzed for stability in the miRNA-181c-5p:ATM-AGO-ligand complex interaction using GROMACS (version 2023.2). Hence, these findings suggest that these molecules hold potential for facilitating AGO-assisted repression of ATM gene translation.

miRNA 与 AGO 的种子区结合,促使人们探索能抵消 miRNA 对目标 mRNA 抑制的小分子。研究发现,这种miRNA-181c-5p在慢性创伤性脑病中上调,而慢性创伤性脑病是接触性运动和军事人员中普遍存在的一种神经退行性疾病。研究旨在找出能破坏 miRNA-181c-5p 和 ATM 之间 AGO 辅助环路形成,从而抑制 ATM 翻译的化合物。研究人员利用 DAVID 生物信息学工具,对三个常用数据库(DIANA-microT-CDS、miRDB、RNA22 和 TargetScan)中的靶基因进行了功能注释和聚类分析。利用 Haddock 服务器制作了 miRNA-181c-5p:ATM-AGO 复合物。通过三阶段对接法,利用 Glide XP 根据小分子与复合物的最高结合亲和力筛选出 2594 个小分子。利用 GROMACS(2023.2 版)进一步分析了前 5 种化合物(DB00674-Galantamine、DB00371-Meprobamate、DB00694-Daunorubicin、DB00837-Progabide 和 DB00851-Dacarbazine)在 miRNA-181c-5p:ATM-AGO 配体相互作用中的稳定性。因此,这些研究结果表明,这些分子具有促进 AGO 辅助抑制 ATM 基因翻译的潜力。
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引用次数: 0
PPARγ modulator predictor (PGMP_v1): chemical space exploration and computational insights for enhanced type 2 diabetes mellitus management.
IF 3.9 2区 化学 Q2 CHEMISTRY, APPLIED Pub Date : 2025-02-01 DOI: 10.1007/s11030-025-11118-5
Sk Abdul Amin, Lucia Sessa, Shovanlal Gayen, Stefano Piotto

Peroxisome proliferator-activated receptor gamma (PPARγ) plays a critical role in adipocyte differentiation and enhances insulin sensitivity. In contemporary drug discovery, in silico design strategies offer significant advantages by revealing essential structural insights for lead optimization. The study is guided by two main objectives: (i) a ligand-based approach to explore the chemical space of PPARγ modulators followed by molecular docking ensembles (MDEs) to investigate ligand-binding interactions, (ii) the development of a supervised ML model for a large dataset of compounds targeting PPARγ. Additionally, the combination of chemical space networks with ML models enables the rapid screening and prediction of PPARγ modulators. These modeling analyses will assist medicinal chemists in designing more potent PPARγ modulators. To further enhance accessibility for the scientific community, we developed an online tool, "PGMP_v1," aimed at prospective screening for PPARγ modulators. The tool "PGMP_v1" is available at the provided link https://github.com/Amincheminfom/PGMP_v1 . The integration of these computational methods has uncovered crucial structural motifs that are essential for PPARγ activity, advancing the development of more effective modulators in the future.

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引用次数: 0
Genome-Assisted Gene-Flow Rescued Genetic Diversity Without Hindering Growth Performance in an Inbred Coho Salmon (Oncorhynchus kisutch) Population Selected for High Growth Phenotype.
IF 2.6 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-02-01 DOI: 10.1007/s10126-025-10416-1
Junya Kobayashi, Ryo Honda, Sho Hosoya, Yuki Nochiri, Keisuke Matsuzaki, Koichi Sugimoto, Atsushi J Nagano, Akira Kumagai, Kiyoshi Kikuchi, Tadahide Kurokawa

Selective breeding is a powerful tool for improving aquaculture production. A well-managed breeding program is essential, as populations can otherwise lose genetic diversity, leading to reduced selection response and inbreeding excesses. In such cases, genetic diversity in broodstock must be restored by introducing individuals from external populations. However, this can reduce the accumulated genetic gains from selective breeding. However, the selective introduction of individuals with superior phenotypes will allow the restoration of genetic diversity without sacrificing these gains. In this study, we demonstrated this possibility using a selectively bred (SB) and a randomly bred (RB) population of coho salmon (Oncorhynchus kisutch). Forty males with superior growth were selected from the RB population using genomic selection and crossed with 127 randomly collected females from the SB population, producing a newly bred (NB) population. Genetic diversity, assessed from population statistics such as effective number of alleles, allele richness, and observed heterozygosity of 11 microsatellite markers, was higher in NB than in SB and RB. Additionally, fork length and body weight were compared among the three populations after 12 months of growth post-fertilization in common tanks. The least-squares means of fork length and body weight were similar between NB (164.9 mm and 57.9 g) and SB (161.1 mm and 53.7 g), while both were significantly greater than RB (150.4 mm and 43.0 g). Our results highlight the effectiveness of genome-assisted gene flow in restoring the genetic diversity of a population without compromising accumulated genetic gain in growth.

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引用次数: 0
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