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Metabolic profile characterization of voxelotor in human urine based on in vivo and in vitro models for doping control. 基于体内和体外模型的人体尿液中伏牛素代谢特征描述,用于兴奋剂控制。
IF 3.8 2区 化学 Q1 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-04 DOI: 10.1007/s00216-024-05555-8
Xueqi Liang, Tian Tian, Ziling Zheng, Hao Geng, Yuanhong Shan, Xiaojun Deng

Voxelotor was approved for the treatment of sickle cell anemia as a potent hemoglobin S polymerization inhibitor. Owing to its ability to affect blood components and its potential to enhance athletic performance, voxelotor was included in the prohibited list issued by the World Anti-Doping Agency in 2023, banning its use both in and out of competition. This study aimed to comprehensively investigate the metabolic profile of voxelotor in human urine and identify suitable metabolites for long-term analytical retrospectivity in doping control. A novel strategy for metabolite identification was established by combining in vivo human administration with isotope labeling-based in vitro metabolism analysis. A single microdose of voxelotor was administered orally to five volunteers, and urine samples were collected for up to 28 days post-administration. Concurrently, in vitro incubation of human liver microsomes with voxelotor and D3-voxelotor was conducted, and the microsomal incubates were analyzed via liquid chromatography-high-resolution mass spectrometry. Targeted metabolite searches in human urine samples and automated nontargeted screening of isotope metabolite ion pairs in incubation samples led to the discovery of 9 phase I metabolites and 23 phase II metabolites. Analysis of the urine excretion curves revealed that 4 metabolites, along with voxelotor, were suitable for long-term anti-doping monitoring, with a detection window exceeding 20 days. Using both in vivo and in vitro metabolic models, this study provides comprehensive insight into the metabolic profile of voxelotor in human urine for the first time, enhancing the capacity for doping screening and extending the retrospectivity of voxelotor detection.

Voxelotor 作为一种强效血红蛋白 S 聚合抑制剂,被批准用于治疗镰状细胞性贫血。由于 Voxelotor 能影响血液成分并有可能提高运动成绩,因此 2023 年世界反兴奋剂机构将其列入禁用清单,禁止在赛内和赛外使用。本研究旨在全面调查人体尿液中伏氧乐果的代谢谱,并确定适合在兴奋剂控制中进行长期分析回溯的代谢物。通过将人体体内给药与基于同位素标记的体外代谢分析相结合,建立了一种新的代谢物鉴定策略。研究人员给五名志愿者口服了一个微剂量的 Voxelotor,并收集了给药后长达 28 天的尿样。与此同时,还对人肝微粒体与伏塞洛托和 D3-伏塞洛托进行了体外培养,并通过液相色谱-高分辨质谱法对微粒体培养物进行了分析。通过对人体尿液样本中的代谢物进行靶向搜索,以及对培养液样本中的同位素代谢物离子对进行自动非靶向筛选,发现了 9 种 I 期代谢物和 23 种 II 期代谢物。对尿液排泄曲线的分析表明,4 种代谢物和伏洛托品适用于长期反兴奋剂监测,检测窗口期超过 20 天。这项研究利用体内和体外代谢模型,首次全面揭示了人体尿液中伏赛洛特的代谢特征,提高了兴奋剂筛查能力,并扩展了伏赛洛特检测的回顾性。
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引用次数: 0
Challenges in Environmental Science and Engineering: water sustainability through the application of advanced and nature-based systems. 环境科学与工程学的挑战:通过应用先进的自然系统实现水资源的可持续性。
IF 5.8 3区 环境科学与生态学 0 ENVIRONMENTAL SCIENCES Pub Date : 2024-10-04 DOI: 10.1007/s11356-024-35215-4
Veeriah Jegatheesan, Eldon R Rene, Li Shu
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引用次数: 0
Effect of primary copper metabolism disturbance on elemental, protein, and lipid composition of the organs in Jackson toxic milk mouse. 初级铜代谢紊乱对杰克逊毒奶鼠器官元素、蛋白质和脂质组成的影响
IF 4.1 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-04 DOI: 10.1007/s10534-024-00640-y
Krzysztof Hadrian, Magdalena Szczerbowska-Boruchowska, Artur Surówka, Olga Ciepiela, Tomasz Litwin, Adam Przybyłkowski

Toxic milk (txJ) is an autosomal recessive mutation in the Atp7b gene in the C3H/HeJ strain, observed at The Jackson Laboratory in Maine, USA. TxJ mice exhibit symptoms similar to those of human Wilson's disease (WD). The study aimed to verify organ involvement in a mouse model of WD. TxJ mice and control animals were sacrificed at 2, 4, 8, and 14 months of age. Total X-ray Fluorescence Spectroscopy (TXRF) was used to determine the elemental concentration in organs. Tissue chemical composition was measured by Fourier Transform Infrared Spectroscopy (FTIR). Additionally, hybrid mapping of FTIR and microXRF was performed. Elevated concentrations of Cu were observed in the liver, striatum, eye, heart, and duodenum of txJ mice across age groups. In the striatum of the oldest txJ mice, there was lower lipid content and a higher fraction of saturated fats. The secondary structure of striatum proteins was disturbed in txJ mice. In the livers of txJ mice, higher concentrations of saturated fats and disturbances in the secondary structure of proteins were observed. The concentration of neurofilaments was significantly higher in txJ serum. The distribution of Cu deposits in brains was uniform with no prevalence in any anatomic structure in either group, but significant protein structure changes were observed exclusively in the striatum of txJ. In this txJ animal model of WD, pathologic copper accumulation occurs in the duodenum, heart, and eye tissues. Increased copper concentration in the liver and brain results in increased saturated fat content and disturbances in secondary protein structure, leading to hepatic injury and neurodegeneration.

毒性牛奶(txJ)是一种常染色体隐性突变,发生在美国缅因州杰克逊实验室的 C3H/HeJ 品系中的 Atp7b 基因上。TxJ 小鼠表现出与人类威尔逊氏病(WD)相似的症状。该研究旨在验证 WD 小鼠模型的器官受累情况。TxJ小鼠和对照组动物分别在2、4、8和14月龄时被处死。采用全 X 射线荧光光谱法(TXRF)测定器官中的元素浓度。傅立叶变换红外光谱法(FTIR)测量了组织的化学成分。此外,还进行了傅立叶变换红外光谱和 microXRF 的混合绘图。在各年龄组 txJ 小鼠的肝脏、纹状体、眼睛、心脏和十二指肠中观察到铜浓度升高。在年龄最大的 txJ 小鼠的纹状体中,脂质含量较低,饱和脂肪的比例较高。txJ小鼠纹状体蛋白质的二级结构受到干扰。在 txJ 小鼠的肝脏中,观察到饱和脂肪浓度较高,蛋白质二级结构紊乱。txJ血清中神经丝的浓度明显更高。铜沉积物在大脑中的分布是均匀的,在两组小鼠的任何解剖结构中都不普遍存在,但只在 txJ 的纹状体中观察到明显的蛋白质结构变化。在这种 txJ WD 动物模型中,十二指肠、心脏和眼组织中出现了病理性铜蓄积。肝脏和大脑中铜浓度的增加会导致饱和脂肪含量增加和二级蛋白结构紊乱,从而导致肝损伤和神经变性。
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引用次数: 0
Blocking GATA6 Alleviates Pyroptosis and Inhibits Abdominal Wall Endometriosis Lesion Growth Through Inactivating the PI3K/AKT Pathway. 阻断 GATA6 可通过抑制 PI3K/AKT 通路缓解脓毒症并抑制腹壁子宫内膜异位症病灶生长
IF 1.8 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-04 DOI: 10.1007/s12013-024-01583-4
Xiufang Du, Hongjie Yang, Xiaobei Kang, Changna Fu, Tao Yang

Endometriosis is a benign gynecological disorder characterized by the abnormal presence of endometrium-like cells, referred to as ectopic tissue, located outside the uterine cavity. Beyond the abnormal proliferation of endometrium-like tissues within and beyond the pelvic cavity, compelling scientific evidence underscores the crucial involvement of the NOD-like receptor NLRP3 inflammasome and pyroptosis in the pathogenesis of EMS. Our investigation has revealed a striking upregulation of the endogenous protein GATA-binding protein 6 (GATA6) in abdominal wall EMS. Notably, the knockdown of GATA6 significantly impaired the viability and migratory potential of primary ectopic endometrial stromal cells (EESCs) while also inhibiting crucial markers of pyroptosis, such as NLRP3, the gasdermin D N-terminal fragment (GSDMD-N), and reactive oxygen species (ROS) levels within these cells. Delving deeper into the underlying mechanisms, we discovered that suppressing GATA6 mitigated the activation of the phosphatidylinositol 3-kinase (PI3K)/protein kinase B (AKT) signaling pathway in EESCs. The administration of 740 Y-P, an agonist of the PI3K/AKT pathway, mitigated the inhibitive actions of GATA6 knockdown on EESCs' growth, migration, and pyroptosis, highlighting the intricate crosstalk between GATA6 and this intricate signaling cascade. In vivo experiments corroborated these findings, demonstrating that reduced GATA6 expression effectively restrained the growth of endometrial lesions and concurrently suppressed pyroptosis, accompanied by a dampening of PI3K/AKT signaling within these lesions. In summary, our study underscores the pivotal role of GATA6 in modulating the growth and pyroptosis of abdominal wall EMS through its regulation of the PI3K/AKT signaling pathway. Silencing GATA6 emerges as a promising approach to alleviate pyroptosis and potentially offers a novel therapeutic angle for managing abdominal wall EMS.

子宫内膜异位症是一种良性妇科疾病,其特征是位于子宫腔外的子宫内膜样细胞(被称为异位组织)的异常存在。除了子宫内膜样组织在盆腔内外的异常增殖外,令人信服的科学证据还强调了 NOD 样受体 NLRP3 炎性体和嗜热症在 EMS 发病机制中的关键作用。我们的研究发现,在腹壁 EMS 中,内源性蛋白 GATA 结合蛋白 6(GATA6)出现了惊人的上调。值得注意的是,敲除 GATA6 会显著降低原发性异位子宫内膜基质细胞(EESCs)的活力和迁移潜力,同时也会抑制这些细胞内的 NLRP3、gasdermin D N-terminal fragment(GSDMD-N)等重要化脓标志物以及活性氧(ROS)水平。深入探究其潜在机制,我们发现抑制 GATA6 可减轻 EESCs 中磷脂酰肌醇 3- 激酶(PI3K)/蛋白激酶 B(AKT)信号通路的激活。PI3K/AKT 通路的激动剂 740 Y-P 可减轻 GATA6 基因敲除对 EESCs 生长、迁移和热昏迷的抑制作用,这突显了 GATA6 与这一错综复杂的信号级联之间错综复杂的相互影响。体内实验证实了这些发现,证明减少 GATA6 的表达有效抑制了子宫内膜病变的生长,同时抑制了脓毒症,并抑制了这些病变中的 PI3K/AKT 信号传导。总之,我们的研究强调了 GATA6 通过调控 PI3K/AKT 信号通路在调节腹壁 EMS 生长和脓毒症中的关键作用。抑制 GATA6 是一种很有前景的方法,可减轻脓毒症,并有可能为治疗腹壁 EMS 提供一个新的治疗角度。
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引用次数: 0
Microplastic pollution in the surface waters of the zuari river, goa, india. 印度果阿 ZUARI 河地表水中的微塑料污染。
IF 2.9 4区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-10-03 DOI: 10.1007/s10661-024-13181-1
Niyati Kalangutkar, Shritesh Mhapsekar, Abhaykrishna M M, Pradnesh Pednekar

Limited research has been conducted on microplastic (MP) contamination in the rivers of Goa. To address this gap, this study examines the levels of MP contamination in the surface water of the Zuari River, Goa. We investigate the abundance, characteristics (size, shape, colour, and polymer composition), and risk assessment of MPs. MPs were detected at all sampling stations in the Zuari River, with concentrations varying from 0.01 particles/L (S3) to 1.38 particles/L (S13). The average abundance of MPs in the water samples was 0.28 ± 0.35 particles/L. MPs were more common in the 0.3-1 mm size range (51.70%) than in the 1-5 mm range (48.30%). The most common MP shapes observed were fibers (37.88%) and fragments (29.66%). FTIR analysis confirmed the presence of polyethylene terephthalate, high-density polyethylene, polypropylene, and polyacrylamide carboxyl-modified MPs. The Pollution Load Index (PLI) showed an average value of 3.8, indicating significant contamination (PLI > 1). Scanning electron microscopy (SEM) revealed various degradation features such as pits, scratches, grooves, and cracks on the MPs surfaces, while energy dispersive X-ray spectroscopy (EDS) detected metals on the MP's surfaces. This study provides key insights into MP pollution in the Zuari River's surface water and lays the groundwork for future research and management strategies in the region.

对果阿邦河流中微塑料 (MP) 污染的研究十分有限。为了填补这一空白,本研究对果阿 Zuari 河地表水中的微塑料污染水平进行了调查。我们调查了微塑料的数量、特征(大小、形状、颜色和聚合物成分)和风险评估。在祖阿里河的所有采样站都检测到了 MPs,浓度从 0.01 微粒/升(S3)到 1.38 微粒/升(S13)不等。水样中 MPs 的平均含量为 0.28 ± 0.35 微粒/升。粒径在 0.3-1 毫米范围内(51.70%)的 MPs 比粒径在 1-5 毫米范围内(48.30%)的 MPs 更常见。最常见的 MP 形状是纤维(37.88%)和碎片(29.66%)。傅立叶变换红外分析证实了聚对苯二甲酸乙二酯、高密度聚乙烯、聚丙烯和聚丙烯酰胺羧基改性 MP 的存在。污染负荷指数(PLI)的平均值为 3.8,表明污染严重(PLI > 1)。扫描电子显微镜(SEM)显示了 MP 表面的各种降解特征,如凹坑、划痕、沟槽和裂缝,而能量色散 X 射线光谱(EDS)则在 MP 表面检测到了金属。这项研究为了解祖阿里河地表水中的 MP 污染情况提供了重要依据,并为该地区未来的研究和管理策略奠定了基础。
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引用次数: 0
Construction of S-scheme g-C3N4/PbTiO3 heterojunction and its highly efficient photocatalytic degradation of organic pollutants under simulated sunlight. S 型 g-C3N4/PbTiO3 异质结的构建及其在模拟阳光下对有机污染物的高效光催化降解。
IF 5.8 3区 环境科学与生态学 0 ENVIRONMENTAL SCIENCES Pub Date : 2024-10-03 DOI: 10.1007/s11356-024-34987-z
Longyun Li, Kunkun Xiao, Jinpu Zhang, Ruihan Du, Chunli Kang

This study successfully synthesized a composite photocatalyst g-C3N4/PbTiO3 through hydrothermal and calcination methods using PbTiO3 and g-C3N4. The catalyst was characterized by XRD, FTIR, Raman, XPS, SEM, TEM, UV-vis DRS, PL, and other techniques. The results indicate that the composite photocatalyst exhibits efficient electron transfer, enhanced light absorption, effective separation and utilization of photogenerated electron-hole pairs, demonstrating superior photocatalytic activity. Under simulated sunlight, the removal efficiency of methyl blue (MB) with an initial concentration of 10 mg/L reaches 93.0% after 120 min. After five cycles, the degradation efficiency of MB is 79.2%, still maintaining 85% of the initial catalytic activity. The pH values in the range of 4.0-7.0, inorganic anions, and water quality have a minimal impact on the photocatalytic degradation of MB. Additionally, the composite photocatalyst exhibits strong removal capabilities for other pollutants, such as tetracycline. Therefore, the prepared catalyst demonstrates good feasibility for practical applications. Free radical quenching experiments indicate that hydroxyl radicals (·OH) are the primary active groups in the photocatalytic degradation of MB. Based on this, a photocatalytic mechanism involving a S-scheme heterojunction has been proposed. This study provides new insights into preparing PbTiO3 composite semiconductors and constructing novel S-scheme heterojunctions.

本研究利用 PbTiO3 和 g-C3N4 通过水热法和煅烧法成功合成了 g-C3N4/PbTiO3 复合光催化剂。通过 XRD、FTIR、拉曼、XPS、SEM、TEM、UV-vis DRS、PL 等技术对催化剂进行了表征。结果表明,该复合光催化剂具有高效的电子传递、更强的光吸收、有效分离和利用光生电子-空穴对等特点,表现出优异的光催化活性。在模拟阳光下,120 分钟后,初始浓度为 10 mg/L 的甲基蓝(MB)的去除率达到 93.0%。经过五个循环后,甲基溴的降解效率为 79.2%,仍保持了 85% 的初始催化活性。pH 值在 4.0-7.0 之间、无机阴离子和水质对甲基溴的光催化降解影响很小。此外,复合光催化剂对其他污染物(如四环素)也有很强的去除能力。因此,所制备的催化剂具有良好的实际应用可行性。自由基淬灭实验表明,羟基自由基(-OH)是光催化降解甲基溴的主要活性基团。在此基础上,提出了一种涉及 S 型异质结的光催化机理。这项研究为制备 PbTiO3 复合半导体和构建新型 S 型异质结提供了新的见解。
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引用次数: 0
Exploring the biosorption of nickel and lead by Fusarium sp. biomass: kinetic, isotherm, and thermodynamic assessment. 探索镰刀菌生物质对镍和铅的生物吸附:动力学、等温线和热力学评估。
IF 5.8 3区 环境科学与生态学 0 ENVIRONMENTAL SCIENCES Pub Date : 2024-10-03 DOI: 10.1007/s11356-024-35192-8
Daniele Moreira, Gabriela Souza Alves, João Marcos Madeira Rodrigues, Bianca Ramos Estevam, Douglas Henrique Sales, Juliana Heloisa Pinê Américo-Pinheiro, Ana Flora Dalberto Vasconcelos, Rosane Freire Boina

Fungal biomass is as a cost-effective and sustainable biosorbent utilized in both active and inactive forms. This study investigated the efficacy of inactivated and dried biomass of Fusarium sp. in adsorbing Ni2+ and Pb2+ from aqueous solutions. The strain underwent sequential cultivation and was recovered by filtration. Then, the biomass was dried in an oven at 80 ± 2 °C and sieved using a 0.1-cm mesh. The biosorbent was thoroughly characterized, including BET surface area analysis, morphology examination (SEM), chemical composition (XRF and FT-IR), thermal behavior (TGA), and surface charge determination (pH-PZC and zeta potential). The biosorption mechanism was elucidated by fitting equilibrium models of kinetics, isotherm, and thermodynamic to the data. The biosorbent exhibited a neutral charge, a rough surface, a relatively modest surface area, appropriate functional groups for adsorption, and thermal stability above 200 °C. Optimal biosorption was achieved at 25 ± 2 °C, using 0.05 g of adsorbent per 50 mL of metallic ion solution at initial concentrations ranging from 0.5 to 2.0 mg L-1 and at pH 4.5 for Pb2+ and Ni2+. Biosorption equilibrium was achieved after 240 min for Ni2+ and 1440 min for Pb2+. The process was spontaneous, mainly through chemisorption, in monolayer for Ni2+ and multilayer for Pb2+, with efficiencies of over 85% for both metallic ion removal. These findings underscore the potential of inactive and dry Fusarium sp. biomass (IDFB) as a promising material for the biosorption of Ni2+ and Pb2+.

真菌生物质是一种具有成本效益和可持续发展的生物吸附剂,可以活性和非活性形式使用。本研究调查了灭活和干燥的镰刀菌生物质吸附水溶液中 Ni2+ 和 Pb2+ 的功效。菌株经过连续培养并通过过滤回收。然后,将生物质在 80 ± 2 °C 的烘箱中烘干,并用 0.1 厘米的筛网过筛。对生物吸附剂进行了全面的表征,包括 BET 表面积分析、形态检查(SEM)、化学成分(XRF 和 FT-IR)、热行为(TGA)和表面电荷测定(pH-PZC 和 zeta 电位)。通过对数据进行动力学、等温线和热力学平衡模型拟合,阐明了生物吸附机理。该生物吸附剂带中性电荷,表面粗糙,表面积相对适中,具有适当的吸附官能团,热稳定性高于 200 °C。在 25 ± 2 °C、初始浓度为 0.5 至 2.0 毫克/升、pH 值为 4.5 的条件下,每 50 毫升金属离子溶液使用 0.05 克吸附剂对 Pb2+ 和 Ni2+ 实现了最佳生物吸附。Ni2+ 和 Pb2+ 分别在 240 分钟和 1440 分钟后达到生物吸附平衡。这一过程是自发的,主要是通过化学吸附,对 Ni2+ 是单层吸附,对 Pb2+ 是多层吸附,对两种金属离子的去除效率均超过 85%。这些发现凸显了非活性干镰刀菌生物质(IDFB)作为一种生物吸附 Ni2+ 和 Pb2+ 的材料的潜力。
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引用次数: 0
Assessment and prediction of Water Quality Index (WQI) by seasonal key water parameters in a coastal city: application of machine learning models. 通过季节性关键水参数评估和预测沿海城市的水质指数(WQI):机器学习模型的应用。
IF 2.9 4区 环境科学与生态学 Q3 ENVIRONMENTAL SCIENCES Pub Date : 2024-10-03 DOI: 10.1007/s10661-024-13209-6
Yuming Mo, Jing Xu, Chanjuan Liu, Jinran Wu, Dong Chen

The Water Quality Index (WQI) provides comprehensive assessments in river systems; however, its calculation involves numerous water quality parameters, costly in sample collection and laboratory analysis. The study aimed to determine key water parameters and the most reliable models, considering seasonal variations in the water environment, to maximize the precision of WQI prediction by a minimal set of water parameters. Ten statistical or machine learning models were developed to predict the WQI over four seasons using water quality dataset collected in a coastal city adjacent to the Yellow Sea in China, based on which the key water parameters were identified and the variations were assessed by the Seasonal-Trend decomposition procedure based on Loess (STL). Results indicated that model performance generally improved with adding more input variables except Self-Organizing Map (SOM). Tree-based ensemble methods like Extreme Gradient Boosting (XGB) and Random Forest (RF) demonstrated the highest accuracy, particularly in winter. Nutrients (Ammonia Nitrogen (AN) and Total Phosphorus (TP)), Dissolved Oxygen (DO), and turbidity were determined as key water parameters, based on which, the prediction accuracy for Medium and Low grades was perfect while it was over 80% for the Good grade in spring and winter and dropped to around 70% in summer and autumn. Nutrient concentrations were higher at inland stations; however, it worsened at coastal stations, especially in summer. The study underscores the importance of reliable WQI prediction models in water quality assessment, especially when data is limited, which are crucial for managing water resources effectively.

水质指数(WQI)可对河流系统进行全面评估,但其计算涉及众多水质参数,样本采集和实验室分析成本高昂。本研究旨在确定关键水质参数和最可靠的模型,同时考虑水环境的季节性变化,以最小的水质参数集最大限度地提高水质指数预测的精度。利用在中国毗邻黄海的沿海城市收集的水质数据集,开发了 10 个统计或机器学习模型来预测四季的水质指数,在此基础上确定了关键水参数,并通过基于黄土的季节-趋势分解程序(STL)评估了水质指数的变化。结果表明,除自组织图(SOM)外,随着输入变量的增加,模型性能普遍提高。基于树的集合方法,如极端梯度提升法(XGB)和随机森林法(RF)的准确度最高,尤其是在冬季。营养元素(氨氮和总磷)、溶解氧和浊度被确定为关键水体参数,根据这些参数,中、低等级水体的预测准确率非常高,而良好等级水体的预测准确率在春季和冬季超过 80%,在夏季和秋季降至 70%左右。内陆站点的营养物浓度较高,而沿海站点的营养物浓度则有所下降,尤其是在夏季。这项研究强调了可靠的水质指数预测模型在水质评估中的重要性,尤其是在数据有限的情况下,这对有效管理水资源至关重要。
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引用次数: 0
Metal variability of the shrimp Palaemon elegans across coastal zones: anthropogenic and geological impacts. 对虾 Palaemon elegans 在沿海地区的金属变异:人为和地质影响。
IF 5.8 3区 环境科学与生态学 0 ENVIRONMENTAL SCIENCES Pub Date : 2024-10-03 DOI: 10.1007/s11356-024-35207-4
Enrique Lozano-Bilbao, Arturo Hardisson, Dailos González-Weller, Soraya Paz, Carmen Rubio, Ángel J Gutiérrez

This study focused on 120 specimens of the shrimp Palaemon elegans collected in intertidal zones in eight selected areas. This study aimed to assess the suitability of P. elegans as a bioindicator of natural and anthropogenic marine pollution. Metal concentrations of aluminum (Al), cadmium (Cd), copper (Cu), iron (Fe), lead (Pb), and zinc (Zn) were measured in shrimp collected from various sites in the Canary Islands, including areas affected by volcanic activity, industrial activity, and control zones. The determination of metal concentrations was conducted using inductively coupled plasma optical emission spectrophotometry (ICP-OES). The results showed significant differences in metal concentrations across the studied sites, with the highest levels of Al, Cu, Fe, Pb, and Zn observed in areas impacted by the Tajogaite volcanic eruption and harbor activity. Sites near old landfills and sewage pipes also exhibited elevated levels of Cd, Cu, and Pb, indicating strong anthropogenic influence. Al was found in the highest concentration in Harbour, reaching 25.7 ± 6.2 mg/kg, while the lowest concentration was observed in Control Lp at 11.5 ± 0.69 mg/kg. Conversely, lower metal concentrations were detected in control zones and areas with high dinoflagellate presence, suggesting a potential role of bioremediation by marine phytoplankton. The ability of P. elegans to accumulate metals in its tissues, particularly in areas of high pollution, highlights its potential as a bioindicator species. This study underscores the importance of P. elegans in monitoring marine pollution and provides insights into the environmental impact of both natural and human-induced contamination on coastal ecosystems.

这项研究的重点是在 8 个选定地区的潮间带采集的 120 个虾类标本(Palaemon elegans)。这项研究旨在评估优雅对虾是否适合作为自然和人为海洋污染的生物指标。研究测量了从加那利群岛不同地点(包括受火山活动影响地区、工业活动区和控制区)采集的虾体内铝(Al)、镉(Cd)、铜(Cu)、铁(Fe)、铅(Pb)和锌(Zn)的金属浓度。采用电感耦合等离子体光发射分光光度法(ICP-OES)测定金属浓度。结果表明,各研究地点的金属浓度存在明显差异,在受塔霍加火山喷发和港口活动影响的地区,铝、铜、铁、铅和锌的含量最高。在旧垃圾填埋场和污水管道附近的地点,镉、铜和铅的含量也有所升高,表明人为影响很大。在海港发现的铝浓度最高,达到 25.7 ± 6.2 毫克/千克,而在对照 Lp 发现的铝浓度最低,为 11.5 ± 0.69 毫克/千克。相反,在对照区和甲藻存在较多的区域检测到的金属浓度较低,这表明海洋浮游植物可能起到了生物修复的作用。秀丽甲藻在其组织中积累金属的能力,尤其是在高污染地区,凸显了其作为生物指标物种的潜力。这项研究强调了秀丽隐杆线虫在监测海洋污染方面的重要性,并提供了有关自然和人为污染对沿海生态系统环境影响的见解。
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引用次数: 0
SMILES-based QSAR virtual screening to identify potential therapeutics for COVID-19 by targeting 3CLpro and RdRp viral proteins. 基于 SMILES 的 QSAR 虚拟筛选,通过靶向 3CLpro 和 RdRp 病毒蛋白确定 COVID-19 的潜在疗法。
IF 4.3 2区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-03 DOI: 10.1186/s13065-024-01302-3
Faezeh Bazzi-Allahri, Fereshteh Shiri, Shahin Ahmadi, Alla P Toropova, Andrey A Toropov

The COVID-19 pandemic has prompted the medical systems of many countries to develop effective treatments to combat the high rate of infection and death caused by the disease. Within the array of proteins found in SARS-CoV-2, the 3 chymotrypsin-like protease (3CLpro) holds significance as it plays a crucial role in cleaving polyprotein peptides into distinct functional nonstructural proteins. Meanwhile, RNA-dependent RNA polymerase (RdRp) takes center stage as the key enzyme tasked with replicating the viral genomic RNA within host cells. These proteins, 3CLpro and RdRp, are deemed optimal subjects for QSAR modeling due to their pivotal functions in the viral lifecycle. In this study, SMILES-based QSAR classification models were developed for a dataset of 2377 compounds that were defined as either active or inactive against 3CLpro and RdRp. Pharmacophore (PH4) and QSAR modeling were used for the virtual screening on 60.2 million compounds including ZINC, ChEMBL, Molport, and MCULE databases to identify new potent inhibitors against 3CLpro and RdRp. Then, a filter was established based on typical molecular characteristics to identify drug-like molecules. The molecular docking was also performed to evaluate the binding affinity of 156 AND 51 potential inhibitors to 3CLpro and RdRp, respectively. Among the 15 hits identified based on molecular docking scores, M3, N2, and N4 were identified as promising inhibitors due to their good synthetic accessibility scores (3.07, 3.11, and 3.29 out of 10 for M3, N2, and N4 respectively). These compounds contain amine functional groups, which are known for their crucial role in the binding interactions between drugs and their targets. Consequently, these hits have been chosen for further biological assay studies to validate their activity. They may represent novel 3CLpro and RdRp inhibitors possessing drug-like properties suitable for COVID-19 therapy.

COVID-19 大流行促使许多国家的医疗系统开发有效的治疗方法,以应对该疾病造成的高感染率和高死亡率。在 SARS-CoV-2 中发现的一系列蛋白质中,3糜蛋白酶样蛋白酶(3CLpro)具有重要意义,因为它在将多肽蛋白裂解为不同功能的非结构蛋白方面发挥着关键作用。与此同时,RNA 依赖性 RNA 聚合酶(RdRp)作为在宿主细胞内复制病毒基因组 RNA 的关键酶占据了中心位置。由于 3CLpro 和 RdRp 这两种蛋白在病毒生命周期中的关键功能,它们被认为是 QSAR 建模的最佳对象。本研究针对 2377 种化合物的数据集开发了基于 SMILES 的 QSAR 分类模型,这些化合物被定义为对 3CLpro 和 RdRp 有活性或无活性。该研究利用Pharmacophore (PH4)和QSAR模型对包括ZINC、ChEMBL、Molport和MCULE数据库在内的6020万个化合物进行了虚拟筛选,以鉴定出针对3CLpro和RdRp的新的强效抑制剂。然后,根据典型的分子特征建立过滤器,以识别类药物分子。同时还进行了分子对接,分别评估了156个和51个潜在抑制剂与3CLpro和RdRp的结合亲和力。在根据分子对接得分确定的 15 个命中物中,M3、N2 和 N4 因其良好的合成亲和性得分(M3、N2 和 N4 分别为 3.07、3.11 和 3.29,满分为 10 分)而被确定为有希望的抑制剂。这些化合物含有胺官能团,众所周知,胺官能团在药物与其靶点的结合相互作用中起着至关重要的作用。因此,这些化合物被选中进行进一步的生物检测研究,以验证其活性。它们可能是新型 3CLpro 和 RdRp 抑制剂,具有类似药物的特性,适合用于 COVID-19 治疗。
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