Tatjana Barthel, Laila Benz, Yara Basler, Thomas Crosskey, Alexander Dillmann, Ronald Förster, Paula Fröling, Camilla G. Dieguez, Christine Gless, Thomas Hauß, Michael Hellmig, Lea Jänisch, David James, Frank Lennartz, Jelena Mijatovic, Melanie Oelker, James W. Scanlan, Gert Weber, Jan Wollenhaupt, Uwe Mueller, Holger Dobbek, Markus C. Wahl, Manfred S. Weiss
Crystallographic fragment screening (CFS) has recently matured into an important method for the early stages of drug discovery projects. It is based on high-throughput structure determination and thus requires a high degree of automation as well as specialized workflows and robust analysis tools. Consequently, large-scale research facilities such as synchrotrons have embraced the method, and developed platforms to perform CFS campaigns with the help of crystallography experts and specific tools. The BESSY II synchrotron, operated by the Helmholtz–Zentrum Berlin (HZB), is one of these synchrotron facilities that offer a CFS platform, named the F2X-facility. Here, the specialized F2X workflow is described along with the relevant differences to other existing CFS platforms, and the ongoing developments aimed at supporting users of the facility. The different stages of a CFS campaign including requirements, beamline capabilities, and the software environment are detailed and explained. A unique F2X-GO kit is featured, which allows users the possibility of performing all sample preparation in their home laboratories. Furthermore, at the HZB a computational workflow has been built to support users beyond the hit identification stage. The advantages of the F2X-facility at HZB are described and references are provided to successfully conduct CFS.
{"title":"The HZB F2X-Facility—An Efficient Crystallographic Fragment Screening Platform","authors":"Tatjana Barthel, Laila Benz, Yara Basler, Thomas Crosskey, Alexander Dillmann, Ronald Förster, Paula Fröling, Camilla G. Dieguez, Christine Gless, Thomas Hauß, Michael Hellmig, Lea Jänisch, David James, Frank Lennartz, Jelena Mijatovic, Melanie Oelker, James W. Scanlan, Gert Weber, Jan Wollenhaupt, Uwe Mueller, Holger Dobbek, Markus C. Wahl, Manfred S. Weiss","doi":"10.1002/appl.202400110","DOIUrl":"https://doi.org/10.1002/appl.202400110","url":null,"abstract":"<p>Crystallographic fragment screening (CFS) has recently matured into an important method for the early stages of drug discovery projects. It is based on high-throughput structure determination and thus requires a high degree of automation as well as specialized workflows and robust analysis tools. Consequently, large-scale research facilities such as synchrotrons have embraced the method, and developed platforms to perform CFS campaigns with the help of crystallography experts and specific tools. The BESSY II synchrotron, operated by the Helmholtz–Zentrum Berlin (HZB), is one of these synchrotron facilities that offer a CFS platform, named the F2X-facility. Here, the specialized F2X workflow is described along with the relevant differences to other existing CFS platforms, and the ongoing developments aimed at supporting users of the facility. The different stages of a CFS campaign including requirements, beamline capabilities, and the software environment are detailed and explained. A unique F2X-GO kit is featured, which allows users the possibility of performing all sample preparation in their home laboratories. Furthermore, at the HZB a computational workflow has been built to support users beyond the hit identification stage. The advantages of the F2X-facility at HZB are described and references are provided to successfully conduct CFS.</p>","PeriodicalId":100109,"journal":{"name":"Applied Research","volume":"3 6","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/appl.202400110","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142764448","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nelson W. Pech-May, Julien Lecompagnon, Philipp Hirsch, Mathias Ziegler
Infrared thermography (IRT) using a focused laser is effective for surface defect detection. Nevertheless, testing complex-shaped components remains a challenging task. The state-of-the-art focuses on testing a limited region of interest rather than the full sample. Thus, detection and location of surface defects has been less researched. Most attempts require a manual scan of the full sample, which makes it hard to reconstruct the full scanned surface. Here, we introduce a reliable workflow for crack detection and semi-automated inspection of complex-shaped components using IRT excited with a laser line. A 6-axis robot arm is used for moving the sample in front of the setup. This approach has been tested on a section of a rail and a gear, both containing defects due to heavy use. Crack detection is based on the segmentation of thermograms obtained by Fourier transform of sorted temperatures. Moreover, texture mapping is used to visualize a reconstructed thermogram on the 3D model of the sample. Our approach illustrates a reliable process towards the digitalization of thermographic testing.
{"title":"Robot-assisted crack detection on complex shaped components using constant-speed scanning infrared thermography with laser line excitation","authors":"Nelson W. Pech-May, Julien Lecompagnon, Philipp Hirsch, Mathias Ziegler","doi":"10.1002/appl.202400007","DOIUrl":"https://doi.org/10.1002/appl.202400007","url":null,"abstract":"<p>Infrared thermography (IRT) using a focused laser is effective for surface defect detection. Nevertheless, testing complex-shaped components remains a challenging task. The state-of-the-art focuses on testing a limited region of interest rather than the full sample. Thus, detection and location of surface defects has been less researched. Most attempts require a manual scan of the full sample, which makes it hard to reconstruct the full scanned surface. Here, we introduce a reliable workflow for crack detection and semi-automated inspection of complex-shaped components using IRT excited with a laser line. A 6-axis robot arm is used for moving the sample in front of the setup. This approach has been tested on a section of a rail and a gear, both containing defects due to heavy use. Crack detection is based on the segmentation of thermograms obtained by Fourier transform of sorted temperatures. Moreover, texture mapping is used to visualize a reconstructed thermogram on the 3D model of the sample. Our approach illustrates a reliable process towards the digitalization of thermographic testing.</p>","PeriodicalId":100109,"journal":{"name":"Applied Research","volume":"4 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/appl.202400007","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869102","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nymphaea caerulea (Blue water lily) is an esthetically pleasing aquatic plant which is widely located across India and Africa. The blue water lily contains an alkaloid called apomorphine which is said to be a sedative, and a nonselective dopamine agonist and is now available in the local and online market in the form of powders and oils for various applications such as sleeping aid, anxiety reliever and sexual performance enhancer. These properties are abused by the consumption of Nymphaea caerulea to achieve a state of “high” which has led the categorization of the same as a novel psychoactive substance. In this paper, a rapid mass spectral analysis was performed for the preliminary screening of commercially available blue water lily products using the Waters Radian as soon as possible instrument, followed by the high performance liquid chromatography-photo diode array method development and validation of the samples for the qualitative and quantitative analysis of apomorphine. Accelerated solvent extraction as a green alternative to the conventional soxhlet extraction was used in the extraction of the plant material. The method was finally screened for its greenness using the Complex green analytical procedure index method. The method was validated with a linearity of 0.9973; limit of detection and limit of quantitation of 0.02 and 0.18 µg/mL, respectively. The method was able to detect and quantitate apomorphine in two samples from the commercially available natural products of Nymphaea caerulea.
{"title":"Accelerated solvent extraction of apomorphine from Nymphaea caerulea (Blue Water Lily) products: A proof-of-concept Green extraction for plant materials","authors":"Rohith Krishna, Anirudha Dixit, Ketan Patil, Shalvi Agrawal, Jilja Joseph, Astha Pandey, Mahipal Singh Sankhla","doi":"10.1002/appl.202400122","DOIUrl":"https://doi.org/10.1002/appl.202400122","url":null,"abstract":"<p><i>Nymphaea caerulea</i> (Blue water lily) is an esthetically pleasing aquatic plant which is widely located across India and Africa. The blue water lily contains an alkaloid called apomorphine which is said to be a sedative, and a nonselective dopamine agonist and is now available in the local and online market in the form of powders and oils for various applications such as sleeping aid, anxiety reliever and sexual performance enhancer. These properties are abused by the consumption of <i>Nymphaea caerulea</i> to achieve a state of “high” which has led the categorization of the same as a novel psychoactive substance. In this paper, a rapid mass spectral analysis was performed for the preliminary screening of commercially available blue water lily products using the Waters Radian as soon as possible instrument, followed by the high performance liquid chromatography-photo diode array method development and validation of the samples for the qualitative and quantitative analysis of apomorphine. Accelerated solvent extraction as a green alternative to the conventional soxhlet extraction was used in the extraction of the plant material. The method was finally screened for its greenness using the Complex green analytical procedure index method. The method was validated with a linearity of 0.9973; limit of detection and limit of quantitation of 0.02 and 0.18 µg/mL, respectively. The method was able to detect and quantitate apomorphine in two samples from the commercially available natural products of <i>Nymphaea caerulea</i>.</p>","PeriodicalId":100109,"journal":{"name":"Applied Research","volume":"4 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/appl.202400122","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869125","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Anne-Kathrin Mildner, Sebastian Einhauser, Stefanie Michaelis, Klara Rogalla v. Bieberstein, Ralf Wagner, Joachim Wegener
Since cell-based virus neutralization assays are still the gold standard to assess a patient's immune protection against a given virus, they are of utmost importance for serodiagnosis, convalescent plasma therapy, and vaccine development. Monitoring the emergence and characteristics of neutralizing antibodies in an outbreak situation, confirming neutralizing antibodies as correlates of protection from infection and testing vaccine-induced potency of neutralizing antibody responses, quests for automated, fast, and parallel neutralization assays. We developed an impedance-based sensor platform (electric cell-substrate impedance sensing, ECIS) providing time-resolved monitoring of the host cell response to viral pseudotypes. For validation, the impedance assay was compared with state-of-the-art quantification of virus-induced reporter protein expression as an independent indicator of virus infection and neutralization. Vesicular stomatitis virus (VSV) derived pseudoviruses encoding the green fluorescent protein (GFP) as reporter and the autologous G protein (VSV-G) for the initial binding to the host cell membrane were used for monitoring of HEK293T cell infection and neutralization with both, impedance and optical readout. Virus-induced cytopathic effects (CPE) were detectable for low pseudotype concentrations (multiplicity of infection 1) in time-resolved impedance profiles as soon as 5–10 h after infection in a concentration-dependent manner. Neutralization efficacy of α-VSV-G antibodies was determined from impedance time courses and IC50 values compared favorably with fluorescence measurements of virus-borne GFP expression. Sera of convalescent COVID-19 patients were tested successfully for SARS-CoV-2 neutralizing antibodies by incubating VSV, pseudotyped with the SARS-CoV-2 spike protein, with different sera before host cell exposure and impedance recordings. In summary: (i) ECIS monitoring was successfully applied to detect virus-mediated cell infection and neutralization; (ii) Impedance-based monitoring allows reducing the assay time to 5–10 h; and (iii) the platform is easily adapted to other virus-based diseases and scalable to high-throughput.
{"title":"Impedance-based monitoring of titration and neutralization assays with VSV-G and SARS-CoV-2-spike pseudoviruses","authors":"Anne-Kathrin Mildner, Sebastian Einhauser, Stefanie Michaelis, Klara Rogalla v. Bieberstein, Ralf Wagner, Joachim Wegener","doi":"10.1002/appl.202400097","DOIUrl":"https://doi.org/10.1002/appl.202400097","url":null,"abstract":"<p>Since cell-based virus neutralization assays are still the gold standard to assess a patient's immune protection against a given virus, they are of utmost importance for serodiagnosis, convalescent plasma therapy, and vaccine development. Monitoring the emergence and characteristics of neutralizing antibodies in an outbreak situation, confirming neutralizing antibodies as correlates of protection from infection and testing vaccine-induced potency of neutralizing antibody responses, quests for automated, fast, and parallel neutralization assays. We developed an impedance-based sensor platform (electric cell-substrate impedance sensing, ECIS) providing time-resolved monitoring of the host cell response to viral pseudotypes. For validation, the impedance assay was compared with state-of-the-art quantification of virus-induced reporter protein expression as an independent indicator of virus infection and neutralization. Vesicular stomatitis virus (VSV) derived pseudoviruses encoding the green fluorescent protein (GFP) as reporter and the autologous G protein (VSV-G) for the initial binding to the host cell membrane were used for monitoring of HEK293T cell infection and neutralization with both, impedance and optical readout. Virus-induced cytopathic effects (CPE) were detectable for low pseudotype concentrations (multiplicity of infection 1) in time-resolved impedance profiles as soon as 5–10 h after infection in a concentration-dependent manner. Neutralization efficacy of α-VSV-G antibodies was determined from impedance time courses and IC<sub>50</sub> values compared favorably with fluorescence measurements of virus-borne GFP expression. Sera of convalescent COVID-19 patients were tested successfully for SARS-CoV-2 neutralizing antibodies by incubating VSV, pseudotyped with the SARS-CoV-2 spike protein, with different sera before host cell exposure and impedance recordings. In summary: (i) ECIS monitoring was successfully applied to detect virus-mediated cell infection and neutralization; (ii) Impedance-based monitoring allows reducing the assay time to 5–10 h; and (iii) the platform is easily adapted to other virus-based diseases and scalable to high-throughput.</p>","PeriodicalId":100109,"journal":{"name":"Applied Research","volume":"3 6","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/appl.202400097","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142764411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rahul Chandel, Shyam Singh Chandel, Deo Prasad, Ram Prakash Dwivedi
The integrated photovoltaic-thermoelectric cooling systems (PV-TECS) can be used to enhance the performance and life expectancy of commercial PV power plants for sustainable power generation. The objective of the study is to assess the efficacy of PV-TECS to address these concerns. In this study, computational fluid dynamics/finite element method analysis and experimental investigation of photovoltaic micro-modules (PVMM-2) with a thermoelectric cooling system and a reference system without it (PVMM-1), is carried out under real outdoor conditions. The logged data and infrared thermal imaging analysis results show that thermoelectric cooling is very effective in maintaining a consistent PV back temperature difference of 18.24°C between PVMM-2 and the reference system, even reaching subzero temperature when the reference module operates close to 60°C. The simulated results are found to be in close agreement with the experimental results (R2 values of 0.83 and 0.94) which allows accurate prediction of system performance under actual solar loading conditions. Further analysis shows that PV-TECS can be effectively used in photovoltaic power plants for efficiency enhancement with a gain in the range of 1%–22% for a monocrystalline PV module depending on location and type of integration. The study is of interest for further research to develop industrial applications.
{"title":"A comprehensive analysis of photovoltaic panel integrated thermoelectric cooling system for enhanced power generation","authors":"Rahul Chandel, Shyam Singh Chandel, Deo Prasad, Ram Prakash Dwivedi","doi":"10.1002/appl.202400100","DOIUrl":"https://doi.org/10.1002/appl.202400100","url":null,"abstract":"<p>The integrated photovoltaic-thermoelectric cooling systems (PV-TECS) can be used to enhance the performance and life expectancy of commercial PV power plants for sustainable power generation. The objective of the study is to assess the efficacy of PV-TECS to address these concerns. In this study, computational fluid dynamics/finite element method analysis and experimental investigation of photovoltaic micro-modules (PVMM-2) with a thermoelectric cooling system and a reference system without it (PVMM-1), is carried out under real outdoor conditions. The logged data and infrared thermal imaging analysis results show that thermoelectric cooling is very effective in maintaining a consistent PV back temperature difference of 18.24°C between PVMM-2 and the reference system, even reaching subzero temperature when the reference module operates close to 60°C. The simulated results are found to be in close agreement with the experimental results (<i>R</i><sup>2</sup> values of 0.83 and 0.94) which allows accurate prediction of system performance under actual solar loading conditions. Further analysis shows that PV-TECS can be effectively used in photovoltaic power plants for efficiency enhancement with a gain in the range of 1%–22% for a monocrystalline PV module depending on location and type of integration. The study is of interest for further research to develop industrial applications.</p>","PeriodicalId":100109,"journal":{"name":"Applied Research","volume":"3 6","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/appl.202400100","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142764402","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
African horned melon (AHM) (Cucumis metuliferus), indigenous to Kenya. It contains high polyphenol and antioxidant content, yet remains underutilized in food products. This study sought to increase the utilization of AHM by developing a supplemented milk product and evaluating the effects of sundried AHM powder on the physicochemical and sensory properties of the fermented milk product. The fermented milk was supplemented with three different forms of AHM powder: whole fruit, peel, and seed, at concentrations of 0.5%, 0.7%, and 1% w/v. Physicochemical parameters such as pH, total titratable acidity (TTA), syneresis, texture, and viscosity were measured, alongside sensory acceptability assessments. Statistical analysis demonstrated significant differences (p < 0.05) in physicochemical and sensory properties between the control (did not contain AHM) and supplemented samples, particularly at higher concentrations and extended storage periods. The inclusion of AHM powder markedly influenced the fermented milk's properties, with increased TTA and syneresis in samples with higher melon powder concentrations. TTA ranged between 0.32% and 0.46% among all samples during storage which were comparatively higher than the recommended values for fermented milk products at 0.3%. pH findings range was 4.22 and 4.58. The pH range between 4.2 and 4.6 is recommended by FDA for fermented milk. Syneresis were between 2% and 13%. Texture was between 1.24 and 3.95 N. Viscosity was between 1.67 and 3.87 cP. Sensory scores ranged from 8.00 to 2.67 during storage. Fruit seed powder (FSP1) recorded the lowest amount of pH. Control maintained a higher score in the sensory attributes.
{"title":"Physicochemical and sensory properties of fermented milk supplemented with sundried African horned melon","authors":"Brenda Micheni, Eddy Owaga, Beatrice Mugendi","doi":"10.1002/appl.202400102","DOIUrl":"https://doi.org/10.1002/appl.202400102","url":null,"abstract":"<p>African horned melon (AHM) (<i>Cucumis metuliferus</i>), indigenous to Kenya. It contains high polyphenol and antioxidant content, yet remains underutilized in food products. This study sought to increase the utilization of AHM by developing a supplemented milk product and evaluating the effects of sundried AHM powder on the physicochemical and sensory properties of the fermented milk product. The fermented milk was supplemented with three different forms of AHM powder: whole fruit, peel, and seed, at concentrations of 0.5%, 0.7%, and 1% w/v. Physicochemical parameters such as pH, total titratable acidity (TTA), syneresis, texture, and viscosity were measured, alongside sensory acceptability assessments. Statistical analysis demonstrated significant differences (<i>p</i> < 0.05) in physicochemical and sensory properties between the control (did not contain AHM) and supplemented samples, particularly at higher concentrations and extended storage periods. The inclusion of AHM powder markedly influenced the fermented milk's properties, with increased TTA and syneresis in samples with higher melon powder concentrations. TTA ranged between 0.32% and 0.46% among all samples during storage which were comparatively higher than the recommended values for fermented milk products at 0.3%. pH findings range was 4.22 and 4.58. The pH range between 4.2 and 4.6 is recommended by FDA for fermented milk. Syneresis were between 2% and 13%. Texture was between 1.24 and 3.95 N. Viscosity was between 1.67 and 3.87 cP. Sensory scores ranged from 8.00 to 2.67 during storage. Fruit seed powder (FSP1) recorded the lowest amount of pH. Control maintained a higher score in the sensory attributes.</p>","PeriodicalId":100109,"journal":{"name":"Applied Research","volume":"3 6","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-08-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/appl.202400102","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142764101","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}