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Transcriptomic and metabolomic analysis reveal differentially expressed genes and metabolic pathways in bermudagrass under drought stress 转录组和代谢组分析揭示了干旱胁迫下百慕大草的差异表达基因和代谢途径
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-18 DOI: 10.1002/csc2.21412
Ravi Teja Seelam, David Jespersen

Drought stress poses a significant challenge to turfgrass growth, particularly in the regions like southern United States, where bermudagrass (Cynodon sp.) is widely used for lawns and sports fields. Drought stress disrupts physiological processes, leading to reduced water availability, impaired photosynthesis, and oxidative stress. To understand the bermudagrass response to drought, we investigated the physiological differences and characterized the gene expression and metabolite profiles in two bermudagrass genotypes, TifTuf and Premier. Physiological measurements showed significant variations in green cover percentage, visual quality, and relative water content between the two genotypes. RNA sequencing revealed extensive gene expression changes, with differentially expressed genes that were upregulated in both genotypes. Gene ontology (GO) analysis highlighted biological processes such as transcription regulation, lipid metabolism, and cellular structure development pathways. KEGG pathway analysis indicated that TifTuf had significant changes in galactose metabolism, carotenoid biosynthesis, and plant hormone signal transduction pathways, while Premier showed enrichment in plant hormone signaling, lipid metabolism, and secondary metabolite biosynthesis pathways. Metabolomic analysis provided insights into metabolic reprogramming due to drought stress. Principal component analysis revealed distinct metabolic patterns between control and drought-stressed samples, with both genotypes showing substantial alterations. Differential metabolite analysis identified key metabolites associated with stress adaptation, including the phytohormone ABA and various amino acids. This analysis elucidates the intricate physiological and molecular mechanisms underlying drought tolerance in bermudagrass genotypes. These findings enhance the understanding of drought stress adaptation strategies in bermudagrass and offer valuable insights for the development of drought-tolerant genotypes.

干旱胁迫对草坪草的生长构成了巨大挑战,尤其是在美国南部等地区,百慕大草(Cynodon sp.)被广泛用于草坪和运动场。干旱胁迫会扰乱生理过程,导致水分供应减少、光合作用受损和氧化应激。为了了解百慕大草对干旱的反应,我们研究了两种百慕大草基因型 TifTuf 和 Premier 的生理差异,并分析了基因表达和代谢物特征。生理测量结果表明,两种基因型在绿色覆盖率、视觉质量和相对含水量方面存在显著差异。RNA 测序显示了广泛的基因表达变化,两种基因型中的差异表达基因都出现了上调。基因本体(GO)分析强调了转录调控、脂质代谢和细胞结构发育途径等生物过程。KEGG 通路分析表明,TifTuf 在半乳糖代谢、类胡萝卜素生物合成和植物激素信号转导通路上有显著变化,而 Premier 则在植物激素信号转导、脂质代谢和次生代谢物生物合成通路上表现出富集。代谢组分析深入揭示了干旱胁迫导致的代谢重编程。主成分分析揭示了对照样本和干旱胁迫样本之间不同的代谢模式,两种基因型都发生了重大变化。差异代谢物分析确定了与胁迫适应相关的关键代谢物,包括植物激素 ABA 和各种氨基酸。这项分析阐明了百慕大草基因型耐旱性背后错综复杂的生理和分子机制。这些发现加深了人们对百慕大草干旱胁迫适应策略的理解,并为开发耐旱基因型提供了宝贵的见解。
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引用次数: 0
Yield determination of temperate maize hybrids with different end-uses: An ecophysiological analysis 不同最终用途的温带玉米杂交种的产量测定:生态生理学分析
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-18 DOI: 10.1002/csc2.21414
Yésica D. Chazarreta, Santiago Alvarez Prado, Víctor D. Giménez, Ana J. P. Carcedo, César G. López, Ignacio A. Ciampitti, Maria E. Otegui

Maize (Zea mays L.) production in Argentina changed markedly during the last decade due to the widespread adoption of late sowing dates, expanding its productive area, and diversifying crop end-uses. This study was conducted to assess how the sowing date and nitrogen (N) availability affect grain yield, its physiological determinants (biomass and its partitioning), and numeric components (kernel number and kernel weight) of maize hybrids marketed for different end-uses. Field experiments were conducted in two growing seasons (2019–2020 and 2020–2021) and two sowing dates within each season (early and late) at a site in the main maize-producing region of Argentina. Within each season × sowing date combination, eight commercial maize hybrids (commercialized as grain, dual-purpose, or silage) were tested under two N levels (N0: no N applied; N250: fertilized with 250 kg N ha−1). The greatest grain yield, biomass, kernel number, and harvest index corresponded to the grain hybrids. Dual-purpose hybrids showed an intermediate grain yield, the highest kernel weight, and a more “silage” than “graniferous” behavior. Silage hybrids had improved light interception up to silking + 15 days (R2) but exhibited the lowest grain yield. Differences in end-use steered crop breeding efforts toward different physiological strategies. The improved understanding of the physiological mechanisms underlying the productivity among maize hybrids with varying end-uses will assist in the selection and management of suitable cultivars to be grown under different systems and environmental variations associated with an extended sowing date period.

过去十年间,由于普遍采用晚播日期、扩大生产面积以及作物最终用途多样化,阿根廷的玉米(Zea mays L.)生产发生了显著变化。本研究旨在评估播种日期和氮素(N)供应量如何影响用于不同最终用途的玉米杂交种的谷物产量、其生理决定因素(生物量及其分配)和数值成分(粒数和粒重)。在阿根廷玉米主产区的一个地点进行了两个生长季(2019-2020 年和 2020-2021 年)和每个生长季中两个播种期(早播和晚播)的田间试验。在每个季节×播种日期组合中,在两种氮水平(N0:不施氮;N250:每公顷施肥 250 千克氮)下对 8 个商品玉米杂交种(商品化为谷物、两用玉米或青贮玉米)进行了测试。谷物杂交种的谷物产量、生物量、果仁数和收获指数最高。两用杂交种的谷物产量居中,籽粒重量最高,表现为 "青贮 "而非 "颗粒"。青贮杂交种在成丝 + 15 天(R2)前的截光性有所改善,但谷物产量最低。最终用途的不同使作物育种工作转向不同的生理策略。对具有不同最终用途的玉米杂交种生产率的生理机制的进一步了解,将有助于选择和管理适合在不同系统和与延长播种期相关的环境变化下种植的栽培品种。
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引用次数: 0
Foliar application of Verticillium dahliae Aspf2-like protein improved the heat tolerance of creeping bentgrass by regulating photosynthetic and antioxidant capabilities 叶面喷施大丽轮枝菌 Aspf2 样蛋白可通过调节光合作用和抗氧化能力提高匍匐翦股颖的耐热性
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-11 DOI: 10.1002/csc2.21415
Yan Yuan, Min Zhou, Wanlin Ni, Yan Zhang, Zhou Li

Continuous high ambient temperature in hot summer months leads to a sharp decline in turf quality of cool-season turfgrass. Verticillium dahliae Aspf2-like protein (VDAL) is a secretory protein of V. dahliae that can improve crop yield and resistance to disease, but its role in improving heat tolerance of cool-season turfgrass has not been reported so far. The objectives of this study were to explore the effect and mechanism of foliar application of VDAL on improving heat tolerance in cool-season creeping bentgrass (Agrostis stolonifera) and to further examine the advantage of foliar spraying with VDAL in mitigating summer bentgrass decline (SBD) in the US transition zone or other regions with similar climate. The results demonstrated that the optimal dose of VDAL for improving thermotolerance of two creeping bentgrass cultivars (heat-tolerant 13 M and heat-sensitive Seaside II) was screened as 0.2 g L−1 based on analyses of chlorophyll content, photochemical efficiency of PSII, and cell membrane stability under controlled heat stress conditions. Foliar application of the optimal dose of VDAL significantly restricted chlorophyll loss under heat stress and also alleviated heat-induced declines in net photosynthetic rate, transpiration rate, stomatal conductance, and water use efficiency. In addition, overaccumulations of superoxide anion radical and hydrogen peroxide could be significantly alleviated by the exogenous application of VDAL through improving the activity of antioxidant enzymes including superoxide dismutase, peroxidase, catalase, and ascorbate peroxidase in two cultivars. A further 2-year field trial showed that foliar application of VDAL improved turf quality, chlorophyll content, photochemical efficiency, and cell membrane stability of the two cultivars during hot summer months of 2022 and 2023. The results indicate that the appropriate dose of VDAL plays a positive role in photosynthetic performance and antioxidant capacity for thermotolerance of creeping bentgrass, and foliar application of VDAL could be considered an effective approach for alleviating SBD.

炎热夏季的持续高温会导致冷季型草坪草质量急剧下降。大丽轮枝菌 Aspf2 样蛋白(VDAL)是大丽轮枝菌的一种分泌蛋白,可提高作物产量和抗病性,但其在提高冷季型草坪草耐热性方面的作用至今尚未见报道。本研究的目的是探讨叶面喷施VDAL对提高冷季型匍匐翦股颖(Agrostis stolonifera)耐热性的作用和机制,并进一步研究叶面喷施VDAL对缓解美国过渡带或其他气候相似地区夏季翦股颖衰退(SBD)的优势。研究结果表明,根据叶绿素含量、PSII 的光化学效率以及受控热胁迫条件下细胞膜稳定性的分析,筛选出提高两种匍匐翦股颖(耐热 13 M 和热敏 Seaside II)耐热性的最佳 VDAL 剂量为 0.2 g L-1。叶面施用最佳剂量的 VDAL 能显著限制热胁迫下的叶绿素损失,还能缓解热诱导的净光合速率、蒸腾速率、气孔导度和水分利用效率的下降。此外,通过提高两个栽培品种的超氧化物歧化酶、过氧化物酶、过氧化氢酶和抗坏血酸过氧化物酶等抗氧化酶的活性,外源施用 VDAL 能明显缓解超氧阴离子自由基和过氧化氢的过度积累。为期两年的田间试验结果表明,在 2022 年和 2023 年炎热的夏季,叶面喷施 VDAL 提高了两个栽培品种的草皮质量、叶绿素含量、光化学效率和细胞膜稳定性。结果表明,适当剂量的 VDAL 对匍匐茎草的光合作用性能和抗氧化能力具有积极作用,叶面喷施 VDAL 可被视为缓解 SBD 的有效方法。
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引用次数: 0
Transgene effects vary among maize populations with implications for improving quantitative traits 不同玉米群体的转基因效应各不相同,对改善数量性状有影响
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-11 DOI: 10.1002/csc2.21408
Julien F. Linares, Nathan D. Coles, Hua Mo, Jeffrey E. Habben, Sabrina Humbert, Carlos Messina, Tom Tang, Mark Cooper, Carla Gho, Ricardo Carrasco, Javier Carter, Jillian Wicher Flounders, E. Charles Brummer

The goal of transgenesis in plant breeding is to make step-change improvements in traits of interest. However, improving quantitative traits, such as yield in maize (Zea mays L.), with transgenes has been difficult. Traditionally, transgene testing is done on a few isogenic lines, and results are extrapolated to entire breeding populations. Testing on limited germplasm does not provide a robust estimate of a transgene's value. Incorporating transgenes directly into breeding populations could increase genetic variance and the rate of genetic gain. Here, we used a transgene that reduces ethylene as a case study and investigated event, transgene, family, and environment effects and their interactions. We also determined whether introduction of the transgene into a breeding population would result in transgenic lines being preferentially selected over nontransgenic lines for yield. We found significant variation in transgene effects across clustered environments and families for multiple traits including yield. In environmental Cluster 2, the transgenic lines yielded 0.4 Mg ha−1 more than nontransgenic lines in family KC22; yet, in family QY43, transgenic lines yielded 0.3 Mg ha−1 less. Similarly, within Cluster 4, the QY43 family had preferential selection of transgenic over nontransgenic lines, whereas in families YE41 and AY91, nontransgenic lines were selected more frequently. These results show the critical importance of evaluating transgenes across broad germplasm diversity to assess their general value to a program. Integrating transgenes, or using gene editing, directly in a breeding program can expand genetic variation for quantitative traits and potentially accelerate genetic gain.

转基因在植物育种中的目标是逐步改善相关性状。然而,利用转基因改善数量性状(如玉米(Zea mays L.)的产量)一直很困难。传统上,转基因测试是在少数同源品系上进行的,然后将结果推断到整个育种群体。在有限的种质上进行测试并不能可靠地估计转基因的价值。将转基因直接纳入育种群体可增加遗传变异和遗传收益率。在此,我们以一个能减少乙烯的转基因为例,研究了事件、转基因、家系和环境的影响及其相互作用。我们还确定了将转基因引入育种群体是否会导致转基因品系在产量上优先于非转基因品系。我们发现,在包括产量在内的多个性状上,转基因效应在不同群集环境和家系之间存在明显差异。在环境群 2 中,KC22 家系的转基因品系比非转基因品系的产量高出 0.4 兆克/公顷-1;但在 QY43 家系中,转基因品系的产量却比非转基因品系低 0.3 兆克/公顷-1。同样,在第 4 组中,QY43 家系优先选择转基因品系而不是非转基因品系,而在 YE41 和 AY91 家系中,非转基因品系被选择的频率更高。这些结果表明,在广泛的种质多样性中评估转基因对计划的总体价值至关重要。在育种计划中直接整合转基因或使用基因编辑,可以扩大数量性状的遗传变异,并有可能加快遗传增益。
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引用次数: 0
Within-canopy carbon partitioning to cotton leaves in response to irrigation 灌溉对棉花叶片冠层内碳分配的影响
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-08 DOI: 10.1002/csc2.21405
Irish Lorraine B. Pabuayon, Jessica Joy B. Bicaldo, Glen L. Ritchie

When water resources are limited, cotton (Gossypium hirsutum L.) plants adapt in part through adjustments in carbon allocation strategies, often evident in the leaves within the canopy. The dynamics of leaf carbon accumulation provide insights into how the plant partitions and uses carbon resources, a key aspect of optimizing crop productivity. In this study, we investigated the dynamics of leaf carbon accumulation in two cotton cultivars (Phytogen [PHY] 350 and Stoneville [ST] 5707) across spatial and temporal scales under two different levels of irrigation (low: 178 mm year−1, high: 356 mm year−1) in 2020 and 2021. For each cultivar and irrigation treatment, an increase in leaf mass occurred primarily at the bottom of the canopy early in the season, followed by additional leaf production in the middle of the plant as the season progressed. Irrigation reduction resulted in a canopy with reduced radiation interception, less leaf shading in the lower canopy, and thicker leaves. In contrast, more irrigation created canopies with a larger effective leaf area, increasing total light interception despite increased shading at the canopy base. Additionally, leaf carbon allocation is synchronized with fruit carbon demand at the onset of the first bloom stage for an early-maturing cultivar. Overall, this study provides valuable insights into the complex relationship between water availability, radiation intensity within the canopy, and leaf carbon dynamics, contributing to a more comprehensive understanding of the plant's overall performance in resource-constrained environments.

当水资源有限时,棉花(Gossypium hirsutum L.)植物会部分地通过调整碳分配策略来适应,这通常在冠层内的叶片上很明显。叶片碳积累的动态变化有助于了解植物如何分配和利用碳资源,这是优化作物生产力的一个关键方面。在本研究中,我们研究了 2020 年和 2021 年两种不同灌溉水平(低灌溉水平:178 毫米/年-1,高灌溉水平:356 毫米/年-1)下两个棉花栽培品种(Phytogen [PHY] 350 和 Stoneville [ST] 5707)叶片碳积累的时空动态。对于每种栽培品种和灌溉处理,叶片质量的增加主要发生在季节初期的冠层底部,随着季节的进展,植株中部的叶片也会增加。灌溉减少导致冠层对辐射的拦截减少,冠层下部的叶片遮挡减少,叶片变厚。与此相反,增加灌溉会使冠层有效叶面积增大,尽管冠层基部遮光增加,但总截光量却增加了。此外,在早熟栽培品种的第一个开花期开始时,叶片碳分配与果实碳需求同步。总之,这项研究为了解水分供应、冠层内辐射强度和叶碳动态之间的复杂关系提供了宝贵的见解,有助于更全面地了解植物在资源受限环境中的整体表现。
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引用次数: 0
Optimizing fungicide application timing for spring dead spot based on soil temperature and season 根据土壤温度和季节优化春季死斑病的杀菌剂施用时机
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-08 DOI: 10.1002/csc2.21411
W. J. Hutchens, J. C. Booth, J. M. Goatley, T. L Roberson, D. S. McCall

Spring dead spot (SDS) (Ophiosphaerella spp.) is the most detrimental disease to warm-season turfgrasses in areas with cold-induced dormancy. Fungicide applications do not provide consistent SDS suppression. One reason for this inconsistency is the use of solely calendar-based fungicide applications instead of considering both calendar date and soil temperature. A field study was conducted at three separate hybrid bermudagrass (Cynodon dactylon (L.) Pers. × transvaalensis Burtt Davy) locations in Virginia to determine the optimal soil temperature and timing for SDS suppression with tebuconazole and isofetamid. Tebuconazole (1.5 kg a.i. ha−1) and isofetamid (4.1 kg a.i. ha−1) were applied at 11 different timings throughout the year based on soil temperatures at a 0- to 10-cm depth. Plots were assessed for SDS severity in the spring and early summer of 2021 and 2022. Two in vitro studies were also conducted with Ophiosphaerella herpotricha and Ophiosphaerella korrae isolates to (1) determine the optimal temperature for growth on potato dextrose agar (PDA) placed on a thermogradient table (13–33°C) and (2) compare the daily growth rate of O. herpotricha and O. korrae isolates at 11, 19, and 27.5°C on PDA. In the field study, isofetamid suppressed SDS more than tebuconazole. Fall applications when soil temperatures were 13°C consistently provided the best SDS suppression. For the in vitro studies, both species grew optimally between 24 and 25°C, yet O. korrae and O. herpotricha growth rates differed at 11°C.

春季枯萎病(SDS)(Ophiosphaerella spp.)使用杀真菌剂无法持续抑制 SDS。造成这种不一致的原因之一是杀真菌剂的施用仅以日历为依据,而没有同时考虑日历日期和土壤温度。在三个不同的杂交百慕大草(Cynodon dactylon (L.) Pers.× transvaalensis Burtt Davy)进行了实地研究,以确定使用戊唑醇和异菌酰胺抑制 SDS 的最佳土壤温度和时间。戊唑醇(1.5 千克活性成分/公顷-1)和异氟氰菊酯(4.1 千克活性成分/公顷-1)根据 0 至 10 厘米深度的土壤温度在全年的 11 个不同时间施用。在 2021 年和 2022 年的春季和初夏,对地块的 SDS 严重程度进行了评估。还对 Ophiosphaerella herpotricha 和 Ophiosphaerella korrae 分离物进行了两项体外研究,以(1)确定在温度梯度表(13-33°C)上的马铃薯葡萄糖琼脂(PDA)上生长的最佳温度;(2)比较 O. herpotricha 和 O. korrae 分离物在 11、19 和 27.5°C 的 PDA 上的日生长率。在实地研究中,异噁唑胺对 SDS 的抑制作用比戊唑醇更强。在土壤温度为 13°C 的秋季施药,对 SDS 的抑制效果最佳。在体外研究中,两个物种的最佳生长温度都是 24 至 25°C,但 O. korrae 和 O. herpotricha 的生长速度在 11°C 时有所不同。
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引用次数: 0
Evaluation of grain dormancy under field conditions in a wheat (Triticum aestivum) qsd1 triple mutant 小麦(Triticum aestivum)qsd1 三重突变体在田间条件下的谷粒休眠评估
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-07 DOI: 10.1002/csc2.21403
Mitsuko Kishi-Kaboshi, Fumitaka Abe, Makiko Chono, Nami Yamaji, Kazuhiro Sato

Genome editing is a powerful tool for improving the agronomic traits of polyploid crops such as wheat (Triticum aestivum) by simultaneously generating mutations in multiple homoeologs. However, improvements in cultivars that are amenable to transformation (and thus genome editing) must be tested in region-specific cultivars under field conditions. Grain dormancy helps ensure the appropriate timing of germination and strong dormancy helps prevent preharvest sprouting. We previously introduced mutations in all three homoeologs of quantitative trait locus for seed dormancy1 (Qsd1) in the wheat cultivar Fielder using genome editing and showed that this triple qsd1 mutant had strengthened grain dormancy under laboratory conditions. In this study, we introduced the triple qsd1 mutation into two Japanese cultivars, Tamaizumi and Tamaizumi R, by recurrent backcrossing. As in Fielder, the triple qsd1 mutation also altered grain dormancy in the Tamaizumi and Tamaizumi R genetic backgrounds under laboratory conditions. To evaluate the mutation's effect on grain dormancy in the field, we conducted field trials in two areas in Japan and assessed the dormancy of the harvested grains. This is the first report of field trials of genome-edited wheat in Japan. Our findings demonstrate the importance of such trials for evaluating grain dormancy, which is influenced by environmental conditions.

基因组编辑是一种强大的工具,可通过同时在多个同源基因中产生突变来改善小麦(Triticum aestivum)等多倍体作物的农艺性状。然而,要改良适合转化(从而进行基因组编辑)的栽培品种,必须在田间条件下对特定地区的栽培品种进行测试。谷粒休眠有助于确保适当的发芽时间,而强休眠则有助于防止收获前发芽。此前,我们利用基因组编辑技术在小麦栽培品种 Fielder 中引入了种子休眠定量性状基因座 1(Qsd1)所有三个同源基因的突变,结果表明这种三重 qsd1 突变体在实验室条件下可增强谷粒休眠。在本研究中,我们通过循环回交将三重qsd1突变体引入两个日本栽培品种--Tamaizumi和Tamaizumi R。与 Fielder 一样,在实验室条件下,三重 qsd1 突变也改变了 Tamaizumi 和 Tamaizumi R 遗传背景中谷粒的休眠。为了评估该突变对田间谷粒休眠的影响,我们在日本的两个地区进行了田间试验,并评估了收获谷粒的休眠情况。这是日本首次报道基因组编辑小麦的田间试验。我们的研究结果表明,此类试验对于评估受环境条件影响的谷粒休眠非常重要。
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引用次数: 0
Variations in endosperm structure facilitate the formation of high protein quality in tetraploid rice 胚乳结构的变化促进了四倍体水稻高蛋白品质的形成
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-07 DOI: 10.1002/csc2.21410
Mingyue Zhan, Pincang Lv, Xiaoling Zhou, Keyi Liu, Rongjie Qiu, Man Wang, Chang Yao, Ziwei Zhao, Xiaoxiao Wu, Xianhua Zhang, Yuchi He, Detian Cai, Zhaojian Song

Rice (Oryza sativa L.) is an important food source and a primary source of high-quality protein. Polyploid breeding is an effective approach to improving the nutritional quality of crops. Several stable tetraploid rice lines with both high seed setting rates and high protein content have been bred. In the present study, the protein quality of two tetraploid rice lines GD2-4x and GD4-4x with high protein content was analyzed in detail, and mechanisms associated with the high protein quality were explored from the perspective of endosperm structure. The results showed that the total protein content of GD2-4x and GD4-4x increased significantly by 40.27% and 35.15%, respectively, when compared to that of 9311-2x (control). The content of each protein component also increased significantly, with a major increase being observed in glutelin content. The contents of 16 types of amino acids and total amino acids, as well as contents of nutrient limiting essential amino acids, such as lysine, threonine, and methionine, in tetraploid rice lines increased significantly when compared to those in the control. The thickness of the aleurone layer on the dorsal, lateral, and ventral positions of GD2-4x and GD4-4x seeds during different developmental days increased significantly when compared to that of 9311-2x seeds. Amyloplasts were more regular and loosely arranged in GD2-4x and GD4-4x seeds. The tetraploid rice lines had higher total protein and amino acid contents, with glutelin accounting for the highest proportion of the increase. The tetraploid rice lines with high protein content had higher nutritional quality and value than the diploid rice line. The high protein quality of tetraploid rice lines could be associated with an increase in aleurone layer thickness, as well as changes in amyloplast morphology and distribution. This study demonstrates that polyploidization is an effective breeding approach to improving the nutritional quality and value of rice seeds. The results provide a theoretical basis for the utilization of tetraploid high protein rice lines and a reference for improving the nutritional quality of other crops.

水稻(Oryza sativa L.)是重要的食物来源,也是优质蛋白质的主要来源。多倍体育种是提高作物营养质量的有效方法。目前已培育出多个具有高结实率和高蛋白含量的稳定四倍体水稻品系。本研究详细分析了两个高蛋白含量四倍体水稻品系 GD2-4x 和 GD4-4x 的蛋白质品质,并从胚乳结构的角度探讨了高蛋白品质的相关机制。结果表明,与 9311-2x(对照)相比,GD2-4x 和 GD4-4x 的总蛋白质含量分别显著增加了 40.27% 和 35.15%。各蛋白质成分的含量也明显增加,其中谷朊含量增加最多。与对照相比,四倍体水稻品系中 16 种氨基酸和总氨基酸的含量,以及赖氨酸、苏氨酸和蛋氨酸等营养限制性必需氨基酸的含量都有显著增加。与 9311-2x 种子相比,GD2-4x 和 GD4-4x 种子在不同发育天数的背面、侧面和腹面位置的胚乳层厚度明显增加。GD2-4x和GD4-4x种子中的淀粉体排列更为规则和松散。四倍体水稻品系的总蛋白质和氨基酸含量较高,其中谷朊酸的增加比例最高。蛋白质含量高的四倍体水稻品系比二倍体水稻品系具有更高的营养品质和价值。四倍体水稻品系的高蛋白质量可能与胚乳层厚度增加以及淀粉体形态和分布的变化有关。这项研究表明,多倍体化是提高水稻种子营养品质和价值的有效育种方法。研究结果为利用四倍体高蛋白水稻品系提供了理论依据,也为提高其他作物的营养品质提供了参考。
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引用次数: 0
Unravelling the environmental drivers determining the residual fraction of soybean seed 揭示决定大豆种子残留部分的环境驱动因素
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-07 DOI: 10.1002/csc2.21406
Emelí Lopez, Santiago Alvarez Prado, José L. Rotundo, José A. Gerde

There are three main components of soybean (Glycine max (L.) Merr.) seeds: protein, oil, and residual. The residual fraction includes soluble and insoluble carbohydrates, lignin, and minerals. Among soluble carbohydrates, the presence of raffinose family of oligosaccharides (RFOs) has poor nutritional value (i.e., raffinose and stachyose), and the inability of monogastric animals to digest them limits the potential use of soybean meal for food and feed applications. Our objective was to understand how different environmental conditions impact soybean seed quality, particularly the concentration of the residual fraction and its components. Nine commercial genotypes from three maturity groups were sown on early and late dates. The concentration of insoluble carbohydrates + lignin was positively associated with seed weight (r = 0.67) and negatively associated with the mean temperature during the seed-filling period (R5–R7; r = −0.61). Within soluble carbohydrates, RFOs were negatively influenced by the mean temperature at the beginning of the seed-filling period (R5–R6; r = −0.37), while sucrose concentration showed the opposite effect (r = 0.43). In contrast, precipitation exhibited a positive correlation with RFOs, whereas sucrose displayed a negative correlation (r = 0.38 and r = −0.42). This study showed that the decrease in protein concentration was related to the increase in the residual fraction of the seeds, and higher temperatures during seed-filling period impacted the residual composition of the seeds, specifically by reducing RFO concentration.

大豆(Glycine max (L.) Merr.)种子有三种主要成分:蛋白质、油和残渣。残渣部分包括可溶性和不可溶性碳水化合物、木质素和矿物质。在可溶性碳水化合物中,棉子糖系列低聚糖(RFO)的营养价值较低(即棉子糖和水苏糖),而且单胃动物无法消化它们,这限制了豆粕在食品和饲料方面的潜在用途。我们的目标是了解不同的环境条件如何影响大豆种子的质量,尤其是残留部分及其成分的浓度。三个成熟度组的九个商业基因型分别在早播和晚播日期播种。不溶性碳水化合物+木质素的浓度与种子重量呈正相关(r = 0.67),与种子填充期的平均温度呈负相关(R5-R7;r = -0.61)。在可溶性碳水化合物中,RFO 受种子填充期开始时的平均温度的负面影响(R5-R6;r = -0.37),而蔗糖浓度则显示出相反的影响(r = 0.43)。相反,降水与 RFO 呈正相关,而蔗糖呈负相关(r = 0.38 和 r = -0.42)。这项研究表明,蛋白质浓度的降低与种子残余部分的增加有关,而种子填充期的较高温度会影响种子的残余成分,特别是通过降低 RFO 浓度。
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引用次数: 0
Genetic and genomic characterization of a multiparent advanced generation intercross (MAGIC) population of peanut (Arachis hypogaea L.) 花生(Arachis hypogaea L.)多亲本高世代杂交(MAGIC)群体的遗传和基因组特性分析
IF 2 3区 农林科学 Q2 AGRONOMY Pub Date : 2024-11-07 DOI: 10.1002/csc2.21402
Ethan Thompson, Hui Wang, Walid Korani, Jake C. Fountain, Albert K. Culbreath, C. Corley Holbrook, Josh P. Clevenger, Baozhu Guo

Multiparent advanced generation intercross (MAGIC) populations are a new genetic resource for high-resolution mapping of quantitative traits and as a source of new germplasm or improved cultivars for breeding due to the high level of recombination events in the population. Here, we have developed an eight-founder MAGIC population for peanut (Arachis hypogaea L.) (PeanutMAGIC). Eight diverse founders were intercrossed using a simple funnel mating design to ensure that the MAGIC population would possess equal representation from each founder. This was followed by advancement using small family plot and single-seed descent, resulting in 3187 F2:7 recombinant inbred lines (RILs). The objective of this study was to introduce this PeanutMAGIC as a new resource for genetic and genomic studies. We randomly selected a smaller subset of 310 RILs (MAGIC Core) from PeanutMAGIC and conducted genotyping using whole genome sequencing and phenotyping over two growing seasons for seed and pod traits. Whole genome characterization of the MAGIC Core demonstrated that PeanutMAGIC harbors a balanced and evenly differentiated mosaic of genomic blocks from eight founders, providing unique recombination events for high-resolution mapping of quantitative traits. Using 2-year phenotypic data, we showed that PeanutMAGIC can improve genetic mapping power of a spectrum of qualitative, like seed coat color, to quantitative traits such as pod weight, seed weight, shelling percentage, pod constriction, and pod reticulation. These findings show that the PeanutMAGIC population can be used by the peanut research community as a new resource for genetic and genomic studies and for cultivar improvement.

多亲本高级世代交替(MAGIC)群体是一种新的遗传资源,可用于高分辨率绘制数量性状图谱,由于群体中存在大量重组事件,还可作为育种用新种质或改良栽培品种的来源。在此,我们为花生(Arachis hypogaea L.)开发了一个八创始人 MAGIC 群体(PeanutMAGIC)。我们采用简单的漏斗交配设计对八个不同的创始者进行了杂交,以确保 MAGIC 群体中每个创始者的代表性相等。随后,利用小家庭小区和单种子后裔进行推广,产生了 3187 个 F2:7 重组近交系(RIL)。本研究的目的是将 PeanutMAGIC 作为遗传和基因组研究的新资源。我们从 PeanutMAGIC 中随机选取了 310 个较小的 RIL 子集(MAGIC Core),利用全基因组测序进行了基因分型,并在两个生长季中对种子和豆荚性状进行了表型分析。MAGIC 核心的全基因组特征表明,PeanutMAGIC 含有来自 8 个创始者的均衡、均匀分化的镶嵌基因组块,为数量性状的高分辨率制图提供了独特的重组事件。利用两年的表型数据,我们发现 PeanutMAGIC 可以提高从种皮颜色等定性性状到豆荚重量、种子重量、脱壳率、豆荚收缩和豆荚网纹等定量性状的遗传图谱绘制能力。这些发现表明,PeanutMAGIC 群体可被花生研究界用作遗传和基因组研究以及品种改良的新资源。
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Crop Science
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