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Combined antimicrobial activity of short peptide and phage-derived endolysin against antibiotic-resistant Salmonella Typhimurium 短肽和噬菌体衍生内溶酶对抗生素耐药鼠伤寒沙门氏菌的联合抗菌活性
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-10 DOI: 10.1016/j.fm.2024.104642
Junhwan Kim , Mahadi Hasan , Xinyu Liao , Tian Ding , Juhee Ahn

This study was designed to evaluate the combination effects of antimicrobial peptides (FK13 and FK16) and phage-encoded endolysin (LysPB32) on the inhibition of growth of polymyxin B-resistant Salmonella Typhimurium ATCC 19585 (STPMB). The inhibitory effects of FK13, FK16, and LysPB32 against STPMB were evaluated by using antimicrobial susceptibility, membrane permeability, biofilm reduction, cross-resistance, and mutant frequency assay. The minimum inhibitory concentrations (MICs) of FK13 and FK16 treated with LysPB32 (FK13+LysPB32 and FK16+LysPB32) against STPMB were decreased from more than 512 to 128 μg/ml and from 64 to 32 μg/ml, respectively. Compared to the control, the number of STPMB in the growing culture was reduced by 4.2 and 5.2 log CFU/ml, respectively, for FK13+LysPB32 and FK16+LysPB32 after 12-h incubation at 37 °C. All treatments (FK13, FK16, FK13+LysPB32, FK16+LysPB32) significantly increased the permeability of the outer membrane of STPMB. Biofilms were significantly decreased from OD600 of 0.6 to 0.16 for FK13+LysPB32 and from 0.6 to 0.13 for FK16+LysPB32. The ratios of MICs of erythromycin, ceftriaxone, polymyxin B, and ciprofloxacin to MIC of the control against STPMB were decreased to 0.50 for FK13+LysPB32 and FK16+LysPB32. The bactericidal activities of amikacin and gentamicin were enhanced for FK13+LysPB32 and FK16+LysPB32 (2-fold < MBC/MIC ratio). The mutant frequencies of STPMB to antibiotics were decreased when treated with FK13+LysPB32 and FK16+LysPB32. The results suggest that the combination of antimicrobial peptides and endolysins can be a promising strategy to control polymyxin B-resistant S. Typhimurium.

本研究旨在评估抗菌肽(FK13 和 FK16)与噬菌体编码的内溶菌素(LysPB32)联合抑制耐多粘菌素 B 的鼠伤寒沙门氏菌 ATCC 19585(STPMB)生长的效果。通过抗菌药敏感性、膜渗透性、生物膜减少、交叉耐药性和突变频率检测,评估了 FK13、FK16 和 LysPB32 对 STPMB 的抑制作用。经 LysPB32 处理的 FK13 和 FK16(FK13+LysPB32 和 FK16+LysPB32)对 STPMB 的最小抑菌浓度(MICs)分别从 512 多微克/毫升降至 128 微克/毫升,从 64 微克/毫升降至 32 微克/毫升。与对照组相比,FK13+LysPB32 和 FK16+LysPB32 在 37 ℃ 培养 12 小时后,生长培养物中的 STPMB 数量分别减少了 4.2 和 5.2 log CFU/ml。所有处理(FK13、FK16、FK13+LysPB32、FK16+LysPB32)都显著增加了 STPMB 外膜的通透性。FK13+LysPB32 可使生物膜的 OD600 从 0.6 显著降至 0.16,FK16+LysPB32 可使生物膜的 OD600 从 0.6 显著降至 0.13。在 FK13+LysPB32 和 FK16+LysPB32 中,红霉素、头孢曲松、多粘菌素 B 和环丙沙星对 STPMB 的 MIC 与对照的 MIC 之比降至 0.50。FK13+LysPB32 和 FK16+LysPB32 可增强阿米卡星和庆大霉素的杀菌活性(MBC/MIC 比为 2 倍)。使用 FK13+LysPB32 和 FK16+LysPB32 时,STPMB 对抗生素的突变频率降低。结果表明,抗菌肽与内溶素的结合是控制耐多粘菌素 B 的鼠伤寒杆菌的一种有效策略。
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引用次数: 0
Prevalence and genomic characteristics of becAB-carrying Clostridium perfringens strains 携带 becAB 的产气荚膜梭菌菌株的流行率和基因组特征
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-07 DOI: 10.1016/j.fm.2024.104640
Mingjin Fang , Yuan Yuan , Edward M. Fox , Ke Wu , Xin Tian , Likun Zhang , Hang Feng , Ruichao Li , Li Bai , Xinglong Wang , Zengqi Yang , Rong Zhang , Juan Wang

Clostridium perfringens, as a foodborne pathogen, can cause various intestinal diseases in both humans and animals according to its repertoire of toxins. In recent years, a multitude of studies have highlighted its threat to infants and young children. C. perfringens carries numerous toxins, with the newly identified BEC toxin confirmed as the second toxin to cause diarrheal illness, after CPE. However, the global dissemination of C. perfringens strains carrying becAB genes, which encode BEC toxins, has not been extensively studied. Following epidemiological surveillance of the prevalence of C. perfringens from different sources in various provinces of China, we identified two becAB-carrying strains and one strain carrying a sequence similar to becAB from distinct provinces and sources. When combined with genomic analysis of other becAB-carrying C. perfringens strains from public databases, we found that becAB was present in strains from different lineages. Our analysis of the plasmid and genetic environment corroborates previous findings on becAB-carrying strains, confirming that it currently achieves horizontal transmission through one type of evolutionarily conserved Pcp plasmid. This study provides a comprehensive analysis of the prevalence and transmission patterns of the newly emerged toxin gene locus, becAB, in C. perfringens. Despite the relatively low identification rate of becAB-carrying strains, their potential impact requires ongoing surveillance and investigation of their features, particularly their antimicrobial resistance.

产气荚膜梭菌是一种食源性病原体,根据其毒素种类的不同,可导致人类和动物患上各种肠道疾病。近年来,许多研究都强调了它对婴幼儿的威胁。产气荚膜杆菌携带多种毒素,新发现的 BEC 毒素被证实是继 CPE 之后第二种导致腹泻疾病的毒素。然而,对携带编码 BEC 毒素的 BecAB 基因的 C. perfringens 菌株在全球的传播情况尚未进行广泛研究。在对中国不同省份不同来源的产气荚膜杆菌流行病学监测后,我们从不同省份和不同来源的产气荚膜杆菌中发现了两株携带 becAB 基因的菌株和一株携带与 becAB 基因相似序列的菌株。结合公共数据库中其他携带 becAB 的 C. perfringens 菌株的基因组分析,我们发现 becAB 存在于不同品系的菌株中。我们对质粒和遗传环境的分析证实了之前对携带 becAB 的菌株的研究结果,证实它目前是通过一种进化保守的 Pcp 质粒实现水平传播的。本研究对产气荚膜杆菌中新出现的毒素基因位点 becAB 的流行和传播模式进行了全面分析。尽管携带 becAB 基因的菌株的鉴定率相对较低,但它们的潜在影响需要对其特征(尤其是抗菌药耐药性)进行持续监控和调查。
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引用次数: 0
Antimicrobial activity of essential oil components against Escherichia coli depends on the food components present in a food matrix 精油成分对大肠杆菌的抗菌活性取决于食品基质中的食品成分
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-06 DOI: 10.1016/j.fm.2024.104638
Héctor Gómez-Llorente , Édgar Pérez-Esteve , José M. Barat , M. Consuelo Jiménez , Concepción González-Bello , Isabel Fernández-Segovia

Despite numerous studies evaluating the antimicrobial activity of essential oil components (EOCs) against different microorganisms, the effect of the composition of the matrix in which they are applied remains unexplored. Hence, the effect of different food components (i.e., proteins, lipids, carbohydrates, acids, ethanol) on vanillin antimicrobial activity was carried out by assessing the growth of E. coli at different incubation times (0, 1, 4, 8 and 24 h). Based on these outcomes, the food components that most adversely affected vanillin antimicrobial activity were subsequently tested with four other EOCs (i.e., carvacrol, eugenol, geraniol, thymol). The effective concentration of antimicrobials after coming into contact with food components was quantified. The results indicated that bovine serum albumin (BSA), sunflower oil and carbohydrates partially or completely inhibited the antimicrobial efficacy of the tested EOCs, and the inhibition rate depended on the specific EOC-food component combination. Geraniol was notably the most efficient with BSA present. Eugenol performed best with sunflower oil. Carvacrol, eugenol, geraniol and thymol were more effective than vanillin with D-lactose present. This study confirmed that loss of EOCs’ effective concentration due to an interaction with food constituents is a significant cause of antimicrobial activity inhibition. These findings underscore the importance of considering matrix composition when selecting antimicrobials to combat a particular strain in real food applications.

尽管有许多研究评估了精油成分(EOCs)对不同微生物的抗菌活性,但应用精油成分的基质成分的影响仍未得到探讨。因此,通过评估不同培养时间(0、1、4、8 和 24 小时)下大肠杆菌的生长情况,研究了不同食物成分(即蛋白质、脂类、碳水化合物、酸、乙醇)对香兰素抗菌活性的影响。根据这些结果,对香兰素抗菌活性影响最大的食品成分随后与其他四种 EOC(即香芹酚、丁香酚、香叶醇和百里酚)一起进行了测试。对抗菌剂与食品成分接触后的有效浓度进行了量化。结果表明,牛血清白蛋白(BSA)、葵花籽油和碳水化合物部分或完全抑制了受测 EOC 的抗菌功效,抑制率取决于特定的 EOC 食品成分组合。在含有 BSA 的情况下,香叶醇的抑制效率最高。丁香酚在葵花籽油中的效果最好。存在 D-乳糖时,香芹醇、丁香酚、香叶醇和百里酚比香兰素更有效。这项研究证实,由于与食物成分的相互作用,EOCs 的有效浓度降低是抑制抗菌活性的一个重要原因。这些发现强调了在实际食品应用中选择抗菌剂来对付特定菌株时考虑基质成分的重要性。
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引用次数: 0
Epidemiology of Staphylococcus aureus food isolates: Comparison of conventional methods with whole genome sequencing typing methods 金黄色葡萄球菌食品分离物的流行病学:传统方法与全基因组测序分型方法的比较
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1016/j.fm.2024.104625
Noémie Vingadassalon , Déborah Merda , Arnaud Felten , Virginie Chesnais , Christos Kourtis , Tom Van Nieuwenhuysen , Yacine Nia , Jacques-Antoine Hennekinne , Marina Cavaiuolo

A variety of methods exists for typing bacteria. However, guidelines for the application and interpretation of typing tools in epidemiologic investigations of Staphylococcus aureus are lacking. This study aimed to identify appropriate typing methods for S. aureus population studies and outbreak investigation. We compared pulsed-field gel electrophoresis (PFGE), seven loci multi-locus sequence typing (MLST), core genome MLST (cgMLST), core single nucleotide polymorphism (cSNP), and enterotoxin (se/SE) profiles on 351 S. aureus isolates. The discriminatory power, concordance, and congruence of typing results were assessed. cgMLST, cSNP, and PFGE yielded the highest discrimination value, followed by se/SE typing and MLST. The best concordance of results was found between cgMLST and cSNP, while the best congruence was observed for cgMLST and cSNP with all methods, followed by PFGE with MLST. The strengths and weaknesses of each method are highlighted. For population structure, cgMLST and cSNP performed better than PFGE and MLST in terms of resolution of clusters and in phylogenetic inference. Enterotoxin profiles matched with MLST groups, suggesting the use of se/SE typing to predict MLST results. For the retrospective analysis of 31 outbreaks, all methods performed almost equally to discriminate epidemiologically related strains and can be used to unambiguously distinguish outbreak strains.

对细菌进行分型的方法多种多样。然而,在金黄色葡萄球菌的流行病学调查中,缺乏应用和解释分型工具的指南。本研究旨在确定适合金黄色葡萄球菌群体研究和疫情调查的分型方法。我们比较了 351 株金黄色葡萄球菌分离物的脉冲场凝胶电泳(PFGE)、七个位点多焦点序列分型(MLST)、核心基因组多焦点序列分型(cgMLST)、核心单核苷酸多态性(cSNP)和肠毒素(se/SE)图谱。cgMLST 、cSNP 和 PFGE 的鉴别值最高,其次是 se/SE 分型和 MLST。cgMLST 和 cSNP 的结果一致性最好,而所有方法中 cgMLST 和 cSNP 的一致性最好,其次是 PFGE 和 MLST。每种方法的优缺点都得到了强调。就种群结构而言,cgMLST 和 cSNP 在分辨聚类和系统发育推断方面的表现优于 PFGE 和 MLST。肠毒素特征与 MLST 群体相匹配,这表明可以使用 se/SE 分型来预测 MLST 结果。在对 31 起疫情进行回顾性分析时,所有方法在区分流行病学相关菌株方面的效果几乎相同,可用于明确区分疫情菌株。
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引用次数: 0
Mechanism of Polygonum hydropiper reducing ethyl carbamate in Chinese rice wine (Huangjiu) brewing 何首乌在中国黄酒酿造中减少氨基甲酸乙酯的机理
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-02 DOI: 10.1016/j.fm.2024.104628
Qi Peng , Huajun Zheng , Jingrun Xue , Yuezheng Xu , Qifan Hou , Kaiming Yang , Huangjia Xia , Guangfa Xie

Polygonum hydropiper (PH) is a rich source of active compounds and serves as a pivotal ingredient in Chinese rice wine (Huangjiu) production. This study investigates the impact of PH and Polygonum hydropiper extract (PHE) on ethyl carbamate (EC) production during Huangjiu fermentation. Our findings reveal that PH enhances the relative abundance of Bacillus subtilis in Huangjiu fermentation, thereby facilitating its interaction with Saccharomyces cerevisiae. Furthermore, PH modulates the urea metabolism of S. cerevisiae. In the PH-B. subtilis-S. cerevisiae fermentation system, the expression of DUR1,2 and DUR3 genes in S. cerevisiae is upregulated. This augmentation leads to increased urea uptake and metabolism by S. cerevisiae in the fermentation broth, subsequently reducing the urea concentration in the fermentation medium (The EC content in the CK group was approximately 355.55 % and 356.05 % higher than those in the PH and PHE groups, respectively). Consequently, PH demonstrates promise in reducing the EC concentration of Huangjiu, offering a novel approach to enhance the safety of Huangjiu consumption.

何首乌(PH)含有丰富的活性化合物,是中国黄酒生产中的重要成分。本研究调查了黄酒发酵过程中 PH 和何首乌提取物(PHE)对氨基甲酸乙酯(EC)产生的影响。我们的研究结果表明,PH 可提高黄酒发酵过程中枯草芽孢杆菌的相对丰度,从而促进其与酿酒酵母的相互作用。此外,PH 还能调节酿酒酵母的尿素代谢。在 PH-B.枯草芽孢杆菌-酿酒酵母发酵系统中,酿酒酵母中的 DUR1、2 和 DUR3 基因表达上调。DUR1,2 和 DUR3 基因的表达被上调,导致发酵液中麦角菌对尿素的吸收和代谢增加,从而降低了发酵培养基中的尿素浓度(CK 组的 EC 含量比 PH 组和 PHE 组分别高出约 355.55 % 和 356.05 %)。因此,PH 值有望降低黄酒的氨基甲酸乙酯浓度,为提高黄酒的食用安全性提供了一种新方法。
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引用次数: 0
Growth and metabolism of halophilic Candida versatilis and Tetragenococcus halophilus in simultaneous and sequential fermentation of salted soy whey 嗜卤白色念珠菌和嗜卤四球球菌在盐渍大豆乳清的同时发酵和顺序发酵中的生长和新陈代谢
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-30 DOI: 10.1016/j.fm.2024.104627
Rebecca Yinglan Zhou , Jian-Yong Chua , Shao-Quan Liu

This study investigated various strategies: mono-, simultaneous and sequential fermentation of halophilic Candida versatilis and Tetragenococcus halophilus to valorize salted whey, a side stream of salted tofu (pressed beancurd) production, with an ultimate goal of creating a soy sauce-like condiment. Growth, glucose, organic acids were monitored throughout fermentation, while free amino acids and volatile compounds were analyzed on the final days. In monoculture fermentation, both C. versatilis and T. halophilus thrived in salted soy whey. However, in co-culture fermentation, an antagonistic relationship was observed, wherein C. versatilis growth was slightly suppressed and T. halophilus was significantly inhibited. In C. versatilis-involved fermentations, no significant (p > 0.05) differences in key volatile and non-volatile chemical components were found among various fermentation modes. Key soy sauce-like volatile compounds, such as 4-ethylguaiacol and 4-ethylphenol, were detected in all C. versatilis-fermented salted soy whey, while T. halophilus primarily functioned as a lactic and acetic acids producer. This study highlights the potential of mixed culture fermentation involving soy sauce yeast and lactic acid bacteria for eventually developing a soy sauce-like condiment from salted soy whey, with C. versatilis playing a crucial role in flavour development. The findings suggest that fermenting of a single culture of C. versatilis in lactic acid-adjusted salted soy whey could be a viable and efficient choice for future production of soy sauce-like condiment.

本研究调查了各种策略:嗜卤念珠菌和嗜卤四源球菌的单发酵、同时发酵和连续发酵,以提高盐渍乳清(盐渍豆腐(压豆腐)生产的副产品)的价值,最终目标是制作类似酱油的调味品。在整个发酵过程中对生长、葡萄糖、有机酸进行监测,最后几天对游离氨基酸和挥发性化合物进行分析。在单培养发酵过程中,C. versatilis 和 T. halophilus 都在盐渍大豆乳清中茁壮成长。然而,在共培养发酵中,观察到了一种拮抗关系,C. versatilis 的生长受到轻微抑制,而 T. halophilus 则受到明显抑制。在有 C. versatilis 参与的发酵中,各种发酵模式的主要挥发性和非挥发性化学成分没有发现显著差异(p > 0.05)。在所有经 C. versatilis 发酵的盐渍大豆乳清中都检测到了关键的酱油类挥发性化合物,如 4-乙基愈创木酚和 4-乙基苯酚,而 T. halophilus 则主要作为乳酸和醋酸的生产者。这项研究强调了酱油酵母和乳酸菌混合培养发酵的潜力,最终可利用盐渍大豆乳清开发出类似酱油的调味品,而 C. versatilis 在风味开发中起着关键作用。研究结果表明,在经乳酸调整的盐渍大豆乳清中发酵单一培养的C. versatilis是未来生产酱油类调味品的一种可行而有效的选择。
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引用次数: 0
Oxygen alters redox cofactor dynamics and induces metabolic shifts in Saccharomyces cerevisiae during alcoholic fermentation 氧气改变氧化还原辅助因子动力学,诱导酿酒酵母在酒精发酵过程中发生新陈代谢转变
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-27 DOI: 10.1016/j.fm.2024.104624
James D. Duncan , Hugo Devillers , Carole Camarasa , Mathabatha E. Setati , Benoit Divol

Environmental conditions significantly impact the metabolism of Saccharomyces cerevisiae, a Crabtree-positive yeast that maintains a fermentative metabolism in high-sugar environments even in the presence of oxygen. Although the introduction of oxygen has been reported to induce alterations in yeast metabolism, knowledge of the mechanisms behind these metabolic adaptations in relation to redox cofactor metabolism and their implications in the context of wine fermentation remains limited. This study aimed to compare the intracellular redox cofactor levels, the cofactor ratios, and primary metabolite production in S. cerevisiae under aerobic and anaerobic conditions in synthetic grape juice. The molecular mechanisms underlying these metabolic differences were explored using a transcriptomic approach. Aerobic conditions resulted in an enhanced fermentation rate and biomass yield. Total NADP(H) levels were threefold higher during aerobiosis, while a decline in the total levels of NAD(H) was observed. However, there were stark differences in the ratio of NAD+/NADH between the treatments. Despite few changes in the differential expression of genes involved in redox cofactor metabolism, anaerobiosis resulted in an increased expression of genes involved in lipid biosynthesis pathways, while the presence of oxygen increased the expression of genes associated with thiamine, methionine, and sulfur metabolism. The production of fermentation by-products was linked with differences in the redox metabolism in each treatment. This study provides valuable insights that may help steer the production of metabolites of industrial interest during alcoholic fermentation (including winemaking) by using oxygen as a lever of redox metabolism.

环境条件对酿酒酵母(Saccharomyces cerevisiae)的新陈代谢有很大影响,酿酒酵母是一种克拉布氏阳性酵母,即使在有氧气的情况下也能在高糖环境中保持发酵代谢。尽管有报道称氧气的引入会引起酵母新陈代谢的改变,但人们对这些新陈代谢适应背后与氧化还原辅助因子代谢有关的机制及其对葡萄酒发酵的影响的了解仍然有限。本研究旨在比较有氧和无氧条件下合成葡萄汁中酿酒酵母细胞内氧化还原辅因子的水平、辅因子比率和初级代谢产物的产生。采用转录组学方法探索了这些代谢差异的分子机制。有氧条件提高了发酵速率和生物量产量。在有氧条件下,NADP(H)的总含量增加了三倍,而 NAD(H)的总含量则有所下降。然而,不同处理之间的 NAD+/NADH 比率存在明显差异。尽管参与氧化还原辅助因子代谢的基因表达差异变化不大,但无氧状态导致参与脂质生物合成途径的基因表达增加,而有氧状态则增加了与硫胺素、蛋氨酸和硫代谢有关的基因的表达。发酵副产品的产生与每种处理中氧化还原代谢的差异有关。这项研究提供了宝贵的见解,可能有助于在酒精发酵(包括酿酒)过程中,利用氧气作为氧化还原代谢的杠杆,指导生产工业上感兴趣的代谢物。
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引用次数: 0
Comparative transcriptomic analysis and volatile compound characterization of Aspergillus tubingensis and Penicillium oxalicum during their infestation of Japonica rice 管曲霉和草青霉侵染粳稻过程中的转录组比较分析和挥发性化合物特征分析
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-27 DOI: 10.1016/j.fm.2024.104626
Jian Guo , Mingming Qiu , Ling Li , Zhenbo Gao , Guoxin Zhou , Xingquan Liu

Volatile organic compounds (VOCs), a byproduct of mold metabolism, have garnered increasing interest because the VOCs can be used to detect food early contamination. So far, the use of VOCs as indicators of rice mildew, specifically caused by Aspergillus tubingensis and Penicillium oxalicum, and the mechanisms of their generation are not well investigated. This study examines the VOCs produced by these molds during paddy storage, utilizing headspace solid-phase micro-extraction gas chromatography-mass spectrometry (HS-SPME-GC–MS). We further elucidate the mechanisms underlying the formation of these VOCs through a comparative transcriptomic analysis. The VOCs characteristic to A. tubingensis and P. oxalicum, identified with a VIP value > 1 in the partial least squares discriminant analysis (PLS-DA) model, are primarily alkenes. Our transcriptome analysis uncovers key metabolic pathways in both molds, including energy metabolism and pathways related to volatile substance formation, and identifies differentially expressed genes associated with alkane and alcohol formation.

挥发性有机化合物(VOCs)是霉菌新陈代谢的副产品,由于 VOCs 可用于检测食品的早期污染,因此越来越受到人们的关注。迄今为止,人们还没有很好地研究如何利用 VOCs 作为水稻霜霉病(特别是由管曲霉和草青霉引起的)的指标,以及 VOCs 的产生机制。本研究利用顶空固相微萃取气相色谱-质谱联用仪(HS-SPME-GC-MS)对这些霉菌在稻谷储藏过程中产生的挥发性有机化合物进行了研究。我们通过比较转录组分析进一步阐明了这些挥发性有机化合物的形成机制。在偏最小二乘判别分析(PLS-DA)模型中,VIP 值为 1 的 A. tubingensis 和 P. oxalicum 所特有的挥发性有机化合物主要是烯烃。我们的转录组分析发现了这两种霉菌的关键代谢途径,包括能量代谢和与挥发性物质形成相关的途径,并确定了与烷烃和酒精形成相关的差异表达基因。
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引用次数: 0
Microbial bacterioruberin: The new C50 carotenoid player in food industries 细菌细菌素:食品工业中新的 C50 类胡萝卜素角色
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-24 DOI: 10.1016/j.fm.2024.104623
Cassamo U. Mussagy , Angie V. Caicedo-Paz , Fabiane O. Farias , Leonardo M. de Souza Mesquita , Daniele Giuffrida , Laurent Dufossé

The demand for natural products has significantly increased, driving interest in carotenoids as bioactive compounds for both human and animal consumption. Carotenoids, natural pigments with several biological properties, like antioxidant and antimicrobial, are increasingly preferred over synthetic colorants by the consumers (chemophobia). The global carotenoid market is projected to reach US$ 2.45 billion by 2034, driven by consumer preferences for natural ingredients and regulatory restrictions on synthetic products. Among carotenoids, bacterioruberin (BR), a C50 carotenoid naturally found in microbial hyperhalophilic archaea and in moderate halophilic archaea, stands out for its exceptional antioxidant capabilities, surpassing even well-known carotenoids like astaxanthin. BR's and its derivatives unique structure, with 13 conjugated double bonds and four -OH groups, contributes to its potent antioxidant activity and potential applications in food, feed, supplements, pharmaceuticals, and cosmeceuticals. This review explores BR's chemical and biological properties, upstream and downstream technologies, analytical techniques, market applications, and prospects in the colorants industry. While BR is not intended to replace existing carotenoids, its inclusion enriches the range of natural products available to meet the rising demand for natural alternatives. Furthermore, BR's promising antioxidant capacity positions it as a key player in the future carotenoid market, offering diverse industries a natural and potent alternative for several applications.

人们对天然产品的需求大幅增加,推动了人们对类胡萝卜素这种供人类和动物食用的生物活性化合物的兴趣。类胡萝卜素是一种天然色素,具有抗氧化和抗菌等多种生物特性,越来越受到消费者的青睐,而非合成着色剂(恐化症)。预计到 2034 年,全球类胡萝卜素市场规模将达到 24.5 亿美元,这主要得益于消费者对天然成分的偏好以及法规对合成产品的限制。在类胡萝卜素中,细菌素(BR)是一种 C50 类胡萝卜素,天然存在于微生物超嗜卤古细菌和中度嗜卤古细菌中,因其卓越的抗氧化能力而脱颖而出,甚至超过了虾青素等知名类胡萝卜素。BR 及其衍生物具有 13 个共轭双键和 4 个 -OH 基团的独特结构,因此具有很强的抗氧化活性,并有望应用于食品、饲料、营养补充剂、药品和药用化妆品中。本综述探讨了 BR 的化学和生物特性、上游和下游技术、分析技术、市场应用以及着色剂行业的前景。虽然 BR 并不打算取代现有的类胡萝卜素,但它的加入丰富了天然产品的种类,满足了人们对天然替代品日益增长的需求。此外,BR 具有良好的抗氧化能力,使其成为未来类胡萝卜素市场的主要参与者,为不同行业的多种应用提供了天然、有效的替代品。
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引用次数: 0
Establishment of LAMP-CRISPR/Cas12a for rapid detection of Escherichia coli O157:H7 and one-pot detection 建立用于快速检测大肠埃希氏菌 O157:H7 的 LAMP-CRISPR/Cas12a 并进行一次性检测
IF 4.5 1区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-08-24 DOI: 10.1016/j.fm.2024.104622
Zuwei Wang, Huan Chen, Antuo Hu, Xinping Cui, Changzheng Shi, Zhaoxin Lu, Fanqiang Meng, Fengxia Lv, Haizhen Zhao, Xiaomei Bie

Escherichia coli O157:H7 is a pathogenic serotype of Escherichia coli. Consumption of food contaminated with E. coli O157:H7 could cause a range of diseases. Therefore, it is of great importance to establish rapid and accurate detection methods for E. coli O157:H7 in food. In this study, based on LAMP and combined with the CRISPR/cas12a system, a sensitive and specific rapid detection method for E. coli O157:H7 was established, and One-Pot detection method was also constructed. The sensitivity of this method could stably reach 9.2 × 10° CFU/mL in pure culture, and the whole reaction can be completed within 1 h. In milk, E. coli O157:H7 with an initial contamination of 7.4 × 10° CFU/mL only needed to be cultured for 3 h to be detected. The test results can be judged by the fluorescence curve or by visual observation under a UV lamp, eliminating instrument limitations and One-Pot detection can effectively prevent the problem of false positives. In a word, the LAMP-CRISPR/cas12a system is a highly sensitive and convenient method for detecting E. coli O157:H7.

大肠杆菌 O157:H7 是一种致病性大肠杆菌血清型。食用受 O157:H7 型大肠杆菌污染的食物可导致一系列疾病。因此,建立快速、准确的食品中大肠杆菌 O157:H7 检测方法具有重要意义。本研究以LAMP为基础,结合CRISPR/cas12a系统,建立了一种灵敏、特异的大肠杆菌O157:H7快速检测方法,并构建了One-Pot检测方法。在牛奶中,初始污染为 7.4 × 10° CFU/mL 的大肠杆菌 O157:H7 只需培养 3 h 即可被检测出来。检测结果可通过荧光曲线或紫外灯下肉眼观察来判断,消除了仪器的局限性,One-Pot 检测可有效防止假阳性问题。总之,LAMP-CRISPR/cas12a 系统是一种高灵敏度、便捷的大肠杆菌 O157:H7 检测方法。
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引用次数: 0
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Food microbiology
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