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Resistance analysis following sotrovimab treatment in participants with COVID-19 during the phase III COMET-ICE study. COVID-19 参与者在 COMET-ICE III 期研究中接受索托维单抗治疗后的耐药性分析。
IF 3.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-11-01 Epub Date: 2023-12-07 DOI: 10.2217/fvl-2023-0146
Sambhavi Subramanian, Gretja Schnell, Julia di Iulio, Anil K Gupta, Adrienne E Shapiro, Elias H Sarkis, Amanda Lopuski, Amanda Peppercorn, Melissa Aldinger, Christy M Hebner, Andrea L Cathcart

Aim: Sotrovimab is an engineered human monoclonal antibody that binds a conserved region of the SARS-CoV-2 spike protein. The COMET-ICE phase III study evaluated sotrovimab for treatment of mild to moderate COVID-19 in nonhospitalized participants with ≥1 risk factor for severe disease progression. Materials & methods: We evaluated the presence of circulating SARS-CoV-2 variants of concern or interest (VOCs/VOIs) and characterized the presence of baseline, post-baseline and emergent amino acid substitutions detected in the epitope of sotrovimab in SARS-CoV-2. Results: None of the sotrovimab-treated participants with baseline epitope substitutions, and 1 of 48 sotrovimab-treated participants with post-baseline epitope substitutions, met the primary clinical endpoint for progression. Conclusion: Overall, progression was not associated with identified VOC/VOI or the presence of epitope substitutions in sotrovimab-treated participants.

目的:索特罗维单抗是一种经过改造的人类单克隆抗体,能与 SARS-CoV-2 棘蛋白的保守区结合。COMET-ICE III 期研究评估了索特罗维奇单抗治疗轻度至中度 COVID-19 的疗效,该药适用于疾病进展风险因素≥1 个的非住院患者。材料与方法:我们评估了是否存在值得关注或感兴趣的SARS-CoV-2循环变异体(VOCs/VOIs),并描述了在SARS-CoV-2索托维单抗表位中检测到的基线、基线后和突发氨基酸替代的存在情况。结果在接受索特罗维奇单抗治疗的患者中,没有人出现基线表位替代,在接受索特罗维奇单抗治疗的 48 名患者中,有 1 人出现基线后表位替代,达到了主要临床终点--病情进展。结论总体而言,索托维单抗治疗参与者的病情进展与VOC/VOI的确定或表位替代的存在无关。
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引用次数: 0
Genotoxicity: a neglected but potentially critical aspect of adenoviral COVID-19 vaccines 遗传毒性:腺病毒COVID-19疫苗一个被忽视但可能至关重要的方面
4区 医学 Q3 VIROLOGY Pub Date : 2023-10-18 DOI: 10.2217/fvl-2023-0013
Alireza Mardomi, Tahoora Mousavi, Farahnoosh Farnood, Hamid Tayebi Khosroshahi
Future VirologyAhead of Print EditorialFree AccessGenotoxicity: a neglected but potentially critical aspect of adenoviral COVID-19 vaccinesAlireza Mardomi, Tahoora Mousavi, Farahnoosh Farnood & Hamid Tayebi KhosroshahiAlireza Mardomi https://orcid.org/0000-0001-8422-8448Department of Medical Laboratory Sciences & Microbiology, Faculty of Medical Sciences, Tabriz Medical Sciences, Islamic Azad University, Tabriz, IranSearch for more papers by this author, Tahoora Mousavi https://orcid.org/0000-0003-2505-370XMolecular & Cell Biology Research Center, Mazandaran University of Medical Sciences, Sari, IranSearch for more papers by this author, Farahnoosh Farnood https://orcid.org/0000-0002-1199-6881Kidney Research Center, Tabriz University of Medical Sciences, Tabriz, IranSearch for more papers by this author & Hamid Tayebi Khosroshahi *Author for correspondence: Tel.: (+98)9146514509; E-mail Address: drtayebikh@yahoo.comhttps://orcid.org/0000-0002-1131-0413Biotechnology Research Center, Tabriz University of Medical Sciences, Tabriz, IranSearch for more papers by this authorPublished Online:18 Oct 2023https://doi.org/10.2217/fvl-2023-0013AboutSectionsPDF/EPUB ToolsAdd to favoritesDownload CitationsTrack CitationsPermissionsReprints ShareShare onFacebookTwitterLinkedInRedditEmail Keywords: adenoviral vaccinesCOVID-19genome integrationmutagenesisSARS-CoV-2A prophylactic immunization against the disease COVID-19, caused by the SARS-CoV-2 virus, can be achieved through vaccination [1]. Vaccination programs have had a remarkable impact on the control of the COVID-19 burden with reports of greater than 90% reductions in mortality rate observed in vaccinated individuals of all ages and reductions in hospitalization by 71–87% [2], though it should be noted that the efficacies of different vaccines against variants of SARS-CoV-2 are variable [1]. However, the long-term safety of COVID-19 vaccines may have been overlooked as a result of the immediacy of the pandemic. Some short-term side effects of the vaccines have gradually become evident; apart from general side effects such as fatigue, headaches, muscle pain and chills, COVID-19 vaccination has been shown to trigger the development of various autoantibodies associated with autoimmune diseases including IgA nephropathy and autoimmune vasculitis [3,4]. Adenoviral-based vaccines are one type of vaccine platform that has been developed for COVID-19 vaccination and warrants further investigation for their potential long-term side effects. These vaccines use a viral vector to deliver a genetic sequence encoding an immunogenic antigen into host cells to elicit transient antigen expression and a prophylactic immune response, but some reports suggest that they may have the potential for genome integration.Viruses have been harnessed as gene-delivery tools in genetic engineering for their biological functions and, while there are also non-viral gene-delivery approaches, viral vectors are known as the most efficient to
编码肿瘤抑制基因或原癌基因的基因组区域发生突变,可能导致恶性肿瘤[8],这些基因在细胞周期调控和肿瘤发生中起着关键作用。虽然已知腺病毒载体作为一种低倾向于整合宿主基因组的插曲体存在于染色体外,但存在于细胞核内的外源DNA片段的少量整合是不可避免的。细胞的非同源末端连接(non-homologous end-joining, NHEJ) DNA修复系统可以驱动载体与基因组的异源重组,尽管它们缺乏整合机制。任何外源DNA进入细胞核的传递都与异源重组[10]有关。在啮齿类动物模型中,在给药重组腺病毒后,观察到肝细胞基因间区域的基因组整合[11-13]。也有类似的啮齿动物接种腺病毒疫苗后发生肿瘤的报道[14,15]。在人类和动物细胞中的体外研究也证明重组腺病毒主要通过异源重组整合到基因组DNA中[11,12,15]。用于检查疫苗安全性的常规测定通常基于生物相容性。然而,这些检测可能无法评估遗传毒性和其他长期问题。插入性突变可以在短期内导致沉默效应,甚至在致癌的情况下,它也需要相当长的时间才能被诊断出来。因此,互补基因组整合评估对于评估腺病毒疫苗插入突变的风险至关重要。即使在病媒整合率似乎可以忽略不计的情况下,利益风险评估对于确保这类疫苗的长期安全性和有效性也是至关重要的。各个国家都有关于基因治疗临床应用的政策,讨论和推荐每种基因治疗方法的安全性问题。例如,美国食品和药物管理局为使用基于媒介的生物制剂提供了建议。根据这一指示,应评估产生具有复制能力的病毒的可能性。在评估基因组整合的风险时,FDA注意到一些病毒骨干能够进行基因组整合。因此,在排除短期毒性后,对接受基因治疗的受试者进行长期随访是必要的。尽管有报道证据表明一些腺病毒载体整合,但FDA将腺病毒归类为不需要长期评估的非整合载体。然而,根据这种分类,疱疹病毒、γ -逆转录病毒、慢病毒、转座子元件和基因组编辑工具都具有基因组修饰能力,需要长期监测[17]。根据所讨论的证据,可能还需要在更全面的遗传研究中评估腺病毒疫苗,以评估其潜在的致突变特性,并重新评估其作为非整合载体的分类。虽然腺病毒整合的风险较低,但需要在人类细胞系和接种疫苗的个体中进一步评估基因组整合的潜力。遗传学研究将有助于腺病毒疫苗的风险评估,并与免疫学研究一起,为这类COVID-19疫苗的可靠风险-效益评估提供信息。财务披露作者与任何组织或实体没有财务关系,与手稿中讨论的主题或材料有经济利益或经济冲突。这包括雇佣、咨询、酬金、股票所有权或期权、专家证词、获得或未决的赠款或专利,或特许权使用费。竞争利益披露作者与任何组织或实体在稿件中讨论的主题或材料方面没有竞争利益或相关关系。这包括雇佣、咨询、酬金、股票所有权或期权、专家证词、获得或未决的赠款或专利,或特许权使用费。写作披露在本手稿的制作过程中没有使用任何写作辅助。参考文献1。李建军,李建军,李建军,等。过去SARS-CoV-2感染对再次感染的保护:系统回顾和荟萃分析。柳叶刀401(10379),833-842(2023)。Crossref, Medline,谷歌Scholar2。Rahmani K, Shavaleh R, Forouhi M等。COVID-19疫苗在降低COVID-19发病率、住院率和死亡率方面的有效性:一项系统综述和荟萃分析前沿公共卫生杂志,2738(2022)。Crossref,谷歌Scholar3。李建军,张建军,张建军,等。接受免疫治疗的癌症患者接种SARS-CoV-2疫苗的纵向疗效和毒性细胞死亡杂志,14(1),49(2023)。Crossref, Medline, CAS,谷歌Scholar4。张军,曹军,叶强。 COVID-19疫苗对肾脏的副作用。疫苗10(11),1783(2022)。Crossref, CAS,谷歌Scholar5。基因工程和质粒。《经验》33,105-109(1977)。Crossref, Medline, CAS,谷歌Scholar6。病毒载体在疫苗开发中的应用,特别强调COVID-19。病毒12(11),1324(2020)。Crossref, Medline, CAS,谷歌Scholar7。Järås M, Brun AC, Karlsson S, Fan X.腺病毒载体在人原始造血细胞中瞬时基因表达的应用与展望。血液学杂志,35(3),343-349(2007)。Crossref, Medline,谷歌Scholar8。Thomas CE, Ehrhardt A, Kay MA。利用病毒载体进行基因治疗的进展和问题。中国生物医学工程学报,21(5),346-358(2003)。Crossref, Medline, CAS,谷歌Scholar9。李建军,张建军。基因治疗中病毒载体的研究进展。物化学。(摩西)81(7),700-708(2016)。Crossref, Medline, CAS,谷歌Scholar10。林志强,杨志强,杨志强,杨志强。末端修饰线性dna在哺乳动物细胞转染中的高自发整合率。科学。众议员13(1),6835(2023)。Crossref, Medline, CAS,谷歌Scholar11。Stephen SL, Montini E, Sivanandam VG等。体内腺病毒载体DNA的染色体整合。中国生物医学工程学报,2004(5):387 - 394(2010)。Crossref, Medline, CAS,谷歌Scholar12。李建军,李建军,李建军,等。腺病毒载体DNA与染色体DNA的同源重组。中国生物医学工程杂志,2009(5):391 - 391(2008)。Crossref, Medline, CAS,谷歌Scholar13。王忠,Troilo PJ, Griffiths TG等。静脉注射腺病毒DNA进入小鼠肝脏基因组DNA的整合频率和插入位点的表征。中国生物医学工程学报,29(6),322-332(2022)。Crossref, Medline, CAS,谷歌Scholar14。腺病毒12型诱导的仓鼠肿瘤的克隆起源:病毒DNA的非特异性染色体整合位点。中国癌症杂志57(14),3001-3009(1997)。中国科学院医学热线,b谷歌0 Scholar15。李春华,李春华,李春华,等。腺病毒载体染色体整合的频率和稳定性。[j] .中国生物医学工程学报,2003(1),32 - 34(1999)。Crossref, Medline, CAS,谷歌Scholar16。Knight-Jones T, Edmond K, Gubbins S, Paton D.兽医和人用疫苗评价方法。程序R. SocLond。医学杂志。科学通报,281(1784),20132839(2014)。中国科学院院士。美国卫生和人类服务部、美国食品和药物管理局以及生物制品评价和研究中心(美国)。行业指南:人类基因治疗产品给药后的长期随访。(2020)。谷歌Scholar18。李建平,李建平。基因治疗和细胞治疗产品的调控方面。中国生物医学工程学报,2015,33(4):559 - 564。谷歌scholarfigures参考文献相关详细信息提前打印保持联系指标历史收稿
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引用次数: 1
Antiviral attributes of bee venom as a possible therapeutic approach against SARS-CoV-2 infection. 蜂毒抗病毒特性作为治疗SARS-CoV-2感染的可能方法
IF 3.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-10-01 Epub Date: 2023-11-07 DOI: 10.2217/fvl-2023-0127
Soumik Goswami, Jayita Pal Chowdhury

The unprecedented scale of the SARS-CoV-2 pandemic has driven considerable investigation into novel antiviral treatments since effective vaccination strategies cannot completely eradicate the virus. Apitherapy describes the medicinal use of bee venom, which may be an effective treatment against SARS-CoV-2 infection. Bee venom contains chemicals that are antimicrobial and stimulate the immune system to counteract viral load. The present review focuses on the use of bee venom as a possible treatment for COVID-19 and reviews studies on the pharmacodynamics of bee venom.

由于有效的疫苗接种策略不能完全根除这种病毒,SARS-CoV-2大流行的空前规模推动了对新型抗病毒治疗方法的大量研究。蜂疗描述了蜂毒的药用用途,这可能是对抗SARS-CoV-2感染的有效治疗方法。蜂毒含有抗菌化学物质,能刺激免疫系统对抗病毒载量。本文综述了蜂毒作为新型冠状病毒肺炎可能的治疗方法,并对蜂毒的药效学研究进行了综述。
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引用次数: 0
In silico identification of deep-sea fungal alkaloids as potential inhibitors of SARS-CoV-2, Delta and Omicron spikes. 深海真菌生物碱作为严重急性呼吸系统综合征冠状病毒2型、德尔塔和奥密克戎尖峰的潜在抑制剂的计算机鉴定。
IF 2.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-10-01 Epub Date: 2023-10-26 DOI: 10.2217/fvl-2023-0102
Abdullah R Alanzi, Mohammad K Parvez, Mohammed S Al-Dosari

Aim: Virtual screening of deep-sea fungal metabolites against SARS-CoV-2 Delta and Omicron spikes as potential antivirals. Materials & methods: Deep-sea fungal alkaloids (n ≥ 150) were evaluated against SARS-CoV-2, Delta and Omicron spikes, using various in silico approaches, including Admet scores, physiochemical properties, molecular docking (MD) and MD simulation (150 ns). Results: The test alkaloids complied with Admet scores and physiochemical properties within acceptable ranges, and followed Lipinski's rule of five. Of these, Cladosporium sphaerospermum-derived cladosin K (tetramate alkaloid) for SARS-CoV-2, Cystobasidium laryngis-derived saphenol (phenazine alkaloid) for Delta and Chaetomium globosum-derived chaetoglobosin E (quinoline alkaloid) for Omicron were identified as potential spike-inhibitors. Conclusion: Our data therefore, strongly warrants further experimental validations of cladosin K, saphenol and chaetoglobosin E, especially against the Omicron and Delta spikes.

目的:虚拟筛选深海真菌代谢产物对抗严重急性呼吸系统综合征冠状病毒2型德尔塔和奥密克戎尖峰作为潜在抗病毒药物。材料与方法:使用各种计算机方法,包括Admet评分、理化性质、分子对接(MD)和MD模拟(150ns),评估深海真菌生物碱(n≥150)对严重急性呼吸系统综合征冠状病毒2型、德尔塔和奥密克戎刺突的抗药性。结果:试验生物碱符合Admet评分和理化性质,在可接受的范围内,并遵循利平斯基五项规则。其中,球孢分枝杆菌衍生的用于严重急性呼吸系统综合征冠状病毒2型的分枝菌素K(四配偶体生物碱)、喉半胱壳菌衍生的用于德尔塔的隐酚(吩嗪生物碱)和球毛菌衍生的毛球菌素E(喹啉生物碱)被确定为潜在的刺突抑制剂。结论:因此,我们的数据有力地证明了分支菌素K、隐酚和毛球菌素E的进一步实验验证,特别是针对奥密克戎和德尔塔尖峰。
{"title":"<i>In silico</i> identification of deep-sea fungal alkaloids as potential inhibitors of SARS-CoV-2, Delta and Omicron spikes.","authors":"Abdullah R Alanzi, Mohammad K Parvez, Mohammed S Al-Dosari","doi":"10.2217/fvl-2023-0102","DOIUrl":"10.2217/fvl-2023-0102","url":null,"abstract":"<p><p><b>Aim:</b> Virtual screening of deep-sea fungal metabolites against SARS-CoV-2 Delta and Omicron spikes as potential antivirals. <b>Materials & methods:</b> Deep-sea fungal alkaloids (n ≥ 150) were evaluated against SARS-CoV-2, Delta and Omicron spikes, using various <i>in silico</i> approaches, including Admet scores, physiochemical properties, molecular docking (MD) and MD simulation (150 ns). <b>Results:</b> The test alkaloids complied with Admet scores and physiochemical properties within acceptable ranges, and followed Lipinski's rule of five. Of these, <i>Cladosporium sphaerospermum</i>-derived cladosin K (tetramate alkaloid) for SARS-CoV-2, <i>Cystobasidium laryngis</i>-derived saphenol (phenazine alkaloid) for Delta and <i>Chaetomium globosum</i>-derived chaetoglobosin E (quinoline alkaloid) for Omicron were identified as potential spike-inhibitors. <b>Conclusion:</b> Our data therefore, strongly warrants further experimental validations of cladosin K, saphenol and chaetoglobosin E, especially against the Omicron and Delta spikes.</p>","PeriodicalId":12505,"journal":{"name":"Future Virology","volume":" ","pages":""},"PeriodicalIF":2.1,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10615363/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71432221","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Oral bemnifosbuvir (AT-527) vs placebo in patients with mild-to-moderate COVID-19 in an outpatient setting (MORNINGSKY). 门诊环境中轻度至中度新冠肺炎患者口服贝姆尼福布韦(AT-527)与安慰剂的比较(MORNINGSKY)。
IF 2.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-10-01 Epub Date: 2023-11-01 DOI: 10.2217/fvl-2023-0115
Arantxa Horga, Rebecca Saenz, Gürdal Yilmaz, Abraham Simón-Campos, Keith Pietropaolo, William J Stubbings, Neil Collinson, Laura Ishak, Barbara Zrinscak, Bruce Belanger, Catherine Granier, Kai Lin, Aeron C Hurt, Xiao-Jian Zhou, Steffen Wildum, Janet Hammond

Aim: This phase III study assessed the efficacy/safety/antiviral activity/pharmacokinetics of bemnifosbuvir, a novel, oral nucleotide analog to treat COVID-19. Patients & methods: Outpatient adults/adolescents with mild-to-moderate COVID-19 were randomized 2:1 to bemnifosbuvir/placebo. Time to symptom alleviation/improvement (primary outcome), risk of hospitalization/death, viral load and safety were evaluated. Results: Although the study was discontinued prematurely and did not meet its primary end point, bemnifosbuvir treatment resulted in fewer hospitalizations (71% relative risk reduction), COVID-19-related medically attended hospital visits, and COVID-19-related complications compared with placebo. No reduction in viral load was observed. The proportion of patients with adverse events was similar; no deaths occurred. Conclusion: Bemnifosbuvir showed hospitalization reduction in patients with variable disease progression risk and was well tolerated. Clinical Trial Registration: NCT04889040 (ClinicalTrials.gov).

目的:本III期研究评估了新型口服核苷酸类似物贝姆尼福布韦治疗新冠肺炎的疗效/安全性/抗病毒活性/药代动力学。患者和方法:门诊患有轻度至中度新冠肺炎的成人/青少年以2:1的比例随机分配给贝姆尼福布韦/安慰剂。评估症状缓解/改善的时间(主要结果)、住院/死亡风险、病毒载量和安全性。结果:尽管该研究提前停止,且未达到其主要终点,但与安慰剂相比,贝姆尼福布韦治疗减少了住院人数(相对风险降低71%)、新冠肺炎相关的医疗就诊和新冠肺炎并发症。没有观察到病毒载量减少。发生不良事件的患者比例相似;没有死亡。结论:在疾病进展风险可变的患者中,贝姆尼福布韦的住院率降低,且耐受性良好。临床试验注册:NCT04889040(ClinicalTrials.gov)。
{"title":"Oral bemnifosbuvir (AT-527) vs placebo in patients with mild-to-moderate COVID-19 in an outpatient setting (MORNINGSKY).","authors":"Arantxa Horga, Rebecca Saenz, Gürdal Yilmaz, Abraham Simón-Campos, Keith Pietropaolo, William J Stubbings, Neil Collinson, Laura Ishak, Barbara Zrinscak, Bruce Belanger, Catherine Granier, Kai Lin, Aeron C Hurt, Xiao-Jian Zhou, Steffen Wildum, Janet Hammond","doi":"10.2217/fvl-2023-0115","DOIUrl":"10.2217/fvl-2023-0115","url":null,"abstract":"<p><p><b>Aim:</b> This phase III study assessed the efficacy/safety/antiviral activity/pharmacokinetics of bemnifosbuvir, a novel, oral nucleotide analog to treat COVID-19. <b>Patients & methods:</b> Outpatient adults/adolescents with mild-to-moderate COVID-19 were randomized 2:1 to bemnifosbuvir/placebo. Time to symptom alleviation/improvement (primary outcome), risk of hospitalization/death, viral load and safety were evaluated. <b>Results:</b> Although the study was discontinued prematurely and did not meet its primary end point, bemnifosbuvir treatment resulted in fewer hospitalizations (71% relative risk reduction), COVID-19-related medically attended hospital visits, and COVID-19-related complications compared with placebo. No reduction in viral load was observed. The proportion of patients with adverse events was similar; no deaths occurred. <b>Conclusion:</b> Bemnifosbuvir showed hospitalization reduction in patients with variable disease progression risk and was well tolerated. <b>Clinical Trial Registration</b>: NCT04889040 (ClinicalTrials.gov).</p>","PeriodicalId":12505,"journal":{"name":"Future Virology","volume":" ","pages":""},"PeriodicalIF":2.1,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10621114/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71480363","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Validation of a risk prediction model for COVID-19: the PERIL prospective cohort study. COVID-19风险预测模型的验证:PERIL前瞻性队列研究
IF 3.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-10-01 Epub Date: 2023-11-07 DOI: 10.2217/fvl-2023-0036
Shahd A Mohammedain, Saif Badran, AbdelNaser Y Elzouki, Halla Salim, Ayesha Chalaby, Mya Siddiqui, Yehia Y Hussein, Hanan Abdul Rahim, Lukman Thalib, Mohammed Fasihul Alam, Daoud Al-Badriyeh, Sumaya Al-Maadeed, Suhail Ar Doi

Aim: This study aims to perform an external validation of a recently developed prognostic model for early prediction of the risk of progression to severe COVID-19. Patients & methods/materials: Patients were recruited at their initial diagnosis at two facilities within Hamad Medical Corporation in Qatar. 356 adults were included for analysis. Predictors for progression of COVID-19 were all measured at disease onset and first contact with the health system. Results: The C statistic was 83% (95% CI: 78%-87%) and the calibration plot showed that the model was well-calibrated. Conclusion: The published prognostic model for the progression of COVID-19 infection showed satisfactory discrimination and calibration and the model is easy to apply in clinical practice.d.

目的:本研究旨在对最近开发的用于早期预测进展为严重COVID-19风险的预后模型进行外部验证。患者和方法/材料:在卡塔尔哈马德医疗公司的两家机构中招募初次诊断的患者,包括356名成年人进行分析。COVID-19进展的预测指标均在发病和首次接触卫生系统时进行测量。结果:C统计量为83% (95% CI: 78% ~ 87%),校正图显示模型校正良好。结论:已发表的新型冠状病毒感染进展预后模型具有良好的判别性和校正性,易于临床应用。
{"title":"Validation of a risk prediction model for COVID-19: the PERIL prospective cohort study.","authors":"Shahd A Mohammedain, Saif Badran, AbdelNaser Y Elzouki, Halla Salim, Ayesha Chalaby, Mya Siddiqui, Yehia Y Hussein, Hanan Abdul Rahim, Lukman Thalib, Mohammed Fasihul Alam, Daoud Al-Badriyeh, Sumaya Al-Maadeed, Suhail Ar Doi","doi":"10.2217/fvl-2023-0036","DOIUrl":"https://doi.org/10.2217/fvl-2023-0036","url":null,"abstract":"<p><p><b>Aim:</b> This study aims to perform an external validation of a recently developed prognostic model for early prediction of the risk of progression to severe COVID-19. <b>Patients & methods/materials:</b> Patients were recruited at their initial diagnosis at two facilities within Hamad Medical Corporation in Qatar. 356 adults were included for analysis. Predictors for progression of COVID-19 were all measured at disease onset and first contact with the health system. <b>Results:</b> The C statistic was 83% (95% CI: 78%-87%) and the calibration plot showed that the model was well-calibrated. <b>Conclusion:</b> The published prognostic model for the progression of COVID-19 infection showed satisfactory discrimination and calibration and the model is easy to apply in clinical practice.d.</p>","PeriodicalId":12505,"journal":{"name":"Future Virology","volume":" ","pages":""},"PeriodicalIF":3.1,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10630949/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134648781","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of human papillomavirus type 197 genome in non-melanoma skin cancer and adjacent non-tumoral skin margins 人乳头瘤病毒197型基因组在非黑色素瘤皮肤癌和邻近非肿瘤皮肤边缘的评估
IF 3.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-09-08 DOI: 10.2217/fvl-2023-0022
Zeinab Vosough, Farzin Sadeghi, G. Kamrani, A. Hasanzadeh, Mohammad Ranaee
Aim: We aimed to investigate the presence of human papillomavirus type 197 (HPV197) in patients with cutaneous squamous cell carcinoma (SCC) and basal cell carcinoma (BCC). Materials & methods: 58 formalin-fixed paraffin-embedded tissue samples, including 12 SCC and 46 BCC and the adjacent non-tumoral skin of the same patient were analyzed for the presence of HPV197E6 gene, using a quantitative real-time PCR assay. Results: The HPV197E6 gene was identified in 12 tumor samples (7 BCC and 5 SCC), but not in the control group. Conclusion: Based on these results, a high copy number of HPV197E6 gene provides additional support for the role of HPV197 in skin cancer.
目的:探讨197型人乳头瘤病毒(HPV197)在皮肤鳞状细胞癌(SCC)和基底细胞癌(BCC)患者中的感染情况。材料与方法:采用实时荧光定量PCR方法,对58份经福尔马林固定石蜡包埋的组织样本进行HPV197E6基因检测,其中12份为鳞状细胞癌,46份为BCC及同一患者邻近非肿瘤皮肤。结果:HPV197E6基因在12例肿瘤样本(7例BCC和5例SCC)中被检测到,而在对照组中未被检测到。结论:基于这些结果,HPV197E6基因的高拷贝数为HPV197在皮肤癌中的作用提供了额外的支持。
{"title":"Evaluation of human papillomavirus type 197 genome in non-melanoma skin cancer and adjacent non-tumoral skin margins","authors":"Zeinab Vosough, Farzin Sadeghi, G. Kamrani, A. Hasanzadeh, Mohammad Ranaee","doi":"10.2217/fvl-2023-0022","DOIUrl":"https://doi.org/10.2217/fvl-2023-0022","url":null,"abstract":"Aim: We aimed to investigate the presence of human papillomavirus type 197 (HPV197) in patients with cutaneous squamous cell carcinoma (SCC) and basal cell carcinoma (BCC). Materials & methods: 58 formalin-fixed paraffin-embedded tissue samples, including 12 SCC and 46 BCC and the adjacent non-tumoral skin of the same patient were analyzed for the presence of HPV197E6 gene, using a quantitative real-time PCR assay. Results: The HPV197E6 gene was identified in 12 tumor samples (7 BCC and 5 SCC), but not in the control group. Conclusion: Based on these results, a high copy number of HPV197E6 gene provides additional support for the role of HPV197 in skin cancer.","PeriodicalId":12505,"journal":{"name":"Future Virology","volume":" ","pages":""},"PeriodicalIF":3.1,"publicationDate":"2023-09-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47928648","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The first evidence of Seoul hantavirus, hepatitis E virus and rabies virus in Rattus norvegicus in Tehran, Iran 伊朗德黑兰褐家鼠首次发现首尔汉坦病毒、戊型肝炎病毒和狂犬病毒
IF 3.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-09-08 DOI: 10.2217/fvl-2023-0047
T. Azimi, Sina Nasrollahian, S. Sabour, Nahal Hadi, L. Azimi, N. Rahbarian, A. Karimi, F. Fallah, Roxana Mansour-Ghanaie, S. Hoseini-Alfatemi, S. A. Fahimzad
Aim: The present study aimed to investigate the frequency of Seoul hantavirus (SEOV), Hepatitis E and rabies viruses in Norway rats in Tehran, Iran. Methods: With the aid of a rat ELISA kit, the we identified specific IgG antibodies against the Rabies virus. The presence of SEOV and HEV was determined using an SYBR Green-based real-time PCR assay. Results: 1% of the R. norvegicus carried the rabies virus. HEV was associated with R. norvegicus obtained from the south of Tehran with the highest frequency (35%). 12% of tests for SEOV were positive. Conclusion: The findings highlight the importance of putting in place rodent control programs and avoiding interaction with rodent populations in urban settings.
目的:调查伊朗德黑兰地区挪威大鼠中首尔汉坦病毒(SEOV)、戊型肝炎病毒和狂犬病毒的感染频率。方法:采用大鼠ELISA试剂盒,鉴定抗狂犬病毒特异性IgG抗体。采用基于SYBR green的实时PCR检测SEOV和HEV的存在。结果:褐家鼠携带狂犬病毒率为1%。德黑兰南部褐家鼠与HEV的关联频率最高(35%)。12%的sev检测呈阳性。结论:研究结果强调了在城市环境中实施啮齿动物控制计划和避免与啮齿动物种群互动的重要性。
{"title":"The first evidence of Seoul hantavirus, hepatitis E virus and rabies virus in Rattus norvegicus in Tehran, Iran","authors":"T. Azimi, Sina Nasrollahian, S. Sabour, Nahal Hadi, L. Azimi, N. Rahbarian, A. Karimi, F. Fallah, Roxana Mansour-Ghanaie, S. Hoseini-Alfatemi, S. A. Fahimzad","doi":"10.2217/fvl-2023-0047","DOIUrl":"https://doi.org/10.2217/fvl-2023-0047","url":null,"abstract":"Aim: The present study aimed to investigate the frequency of Seoul hantavirus (SEOV), Hepatitis E and rabies viruses in Norway rats in Tehran, Iran. Methods: With the aid of a rat ELISA kit, the we identified specific IgG antibodies against the Rabies virus. The presence of SEOV and HEV was determined using an SYBR Green-based real-time PCR assay. Results: 1% of the R. norvegicus carried the rabies virus. HEV was associated with R. norvegicus obtained from the south of Tehran with the highest frequency (35%). 12% of tests for SEOV were positive. Conclusion: The findings highlight the importance of putting in place rodent control programs and avoiding interaction with rodent populations in urban settings.","PeriodicalId":12505,"journal":{"name":"Future Virology","volume":" ","pages":""},"PeriodicalIF":3.1,"publicationDate":"2023-09-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"42547487","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of an in vitro model to study hepatitis C virus-induced fibrosis 丙型肝炎病毒诱导纤维化体外模型的建立
IF 3.1 4区 医学 Q3 VIROLOGY Pub Date : 2023-09-08 DOI: 10.2217/fvl-2022-0206
Bisma Rauff, Mehdi Ramezani-Moghadam, Enoch S. E. Tay, Jacob George, M. Douglas
Aim: To investigate the mechanism of liver fibrosis in chronic hepatitis C virus (HCV) infection we developed an in vitro model. Methods: Huh7 cells were transfected with HCV (JFH1 or Jc1) or sub-genomic replicons and expression of pro-fibrotic cytokines determined by qPCR. Media from infected cells was transferred onto LX2 cells or primary rat stellate cells and expression of pro-fibrotic genes measured by qPCR. Results: Replication competent HCV, but not sub-genomic replicons, induced expression of TGF-β1 and CTGF. Supernatant from infected cells induced α-SMA and COL1A1 expression and stellate cell migration, confirming functional activation. Conclusion: Infected cells produce pro-fibrogenic cytokines TGF-β1 and CTGF and activate stellate cells. This mechanism could be targeted to prevent or treat HCV-induced fibrosis.
目的:建立慢性丙型肝炎病毒(HCV)感染肝纤维化的体外模型,探讨其发生机制。方法:用HCV (JFH1或Jc1)或亚基因组复制子转染Huh7细胞,用qPCR检测促纤维化细胞因子的表达。将感染细胞的培养基转移到LX2细胞或原代大鼠星状细胞上,用qPCR检测促纤维化基因的表达。结果:可复制的HCV可诱导TGF-β1和CTGF的表达,而亚基因组复制子则不能。感染细胞的上清液诱导α-SMA和COL1A1表达和星状细胞迁移,证实功能激活。结论:感染细胞产生促纤维化因子TGF-β1和CTGF,活化星状细胞。这一机制可用于预防或治疗丙型肝炎病毒诱导的纤维化。
{"title":"Development of an in vitro model to study hepatitis C virus-induced fibrosis","authors":"Bisma Rauff, Mehdi Ramezani-Moghadam, Enoch S. E. Tay, Jacob George, M. Douglas","doi":"10.2217/fvl-2022-0206","DOIUrl":"https://doi.org/10.2217/fvl-2022-0206","url":null,"abstract":"Aim: To investigate the mechanism of liver fibrosis in chronic hepatitis C virus (HCV) infection we developed an in vitro model. Methods: Huh7 cells were transfected with HCV (JFH1 or Jc1) or sub-genomic replicons and expression of pro-fibrotic cytokines determined by qPCR. Media from infected cells was transferred onto LX2 cells or primary rat stellate cells and expression of pro-fibrotic genes measured by qPCR. Results: Replication competent HCV, but not sub-genomic replicons, induced expression of TGF-β1 and CTGF. Supernatant from infected cells induced α-SMA and COL1A1 expression and stellate cell migration, confirming functional activation. Conclusion: Infected cells produce pro-fibrogenic cytokines TGF-β1 and CTGF and activate stellate cells. This mechanism could be targeted to prevent or treat HCV-induced fibrosis.","PeriodicalId":12505,"journal":{"name":"Future Virology","volume":"20 1","pages":""},"PeriodicalIF":3.1,"publicationDate":"2023-09-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"68215671","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Yellow fever: is Asia bound to encounter the virus? 黄热病:亚洲一定会遇到这种病毒吗?
4区 医学 Q3 VIROLOGY Pub Date : 2023-09-08 DOI: 10.2217/fvl-2023-0128
Baijayantimala Mishra, Sutapa Rath, Monalisa Mohanty, Prabhudutta Mamidi
Future VirologyAhead of Print EditorialYellow fever: is Asia bound to encounter the virus?Baijayantimala Mishra, Sutapa Rath, Monalisa Mohanty & Prabhudutta MamidiBaijayantimala Mishra *Author for correspondence: Tel.: +91 943 888 4121; E-mail Address: bmishramicro@gmail.comhttps://orcid.org/0000-0002-2604-6678Department of Microbiology, All India Institute of Medical Sciences, Bhubaneswar, 751019, Odisha, IndiaSearch for more papers by this author, Sutapa Rath https://orcid.org/0000-0002-0790-1448Department of Microbiology, All India Institute of Medical Sciences, Bhubaneswar, 751019, Odisha, IndiaSearch for more papers by this author, Monalisa Mohanty https://orcid.org/0000-0003-3940-1998Department of Microbiology, All India Institute of Medical Sciences, Bhubaneswar, 751019, Odisha, IndiaSearch for more papers by this author & Prabhudutta Mamidi https://orcid.org/0000-0002-0187-571XDepartment of Microbiology, All India Institute of Medical Sciences, Bhubaneswar, 751019, Odisha, IndiaSearch for more papers by this authorPublished Online:8 Sep 2023https://doi.org/10.2217/fvl-2023-0128AboutSectionsView ArticleView Full TextPDF/EPUB ToolsAdd to favoritesDownload CitationsTrack CitationsPermissionsReprints ShareShare onFacebookTwitterLinkedInRedditEmail View articleKeywords: aedes mosquitoAfricaarbovirusAsiatransmissionyellow feverPapers of special note have been highlighted as: • of interest; •• of considerable interestReferences1. Kallas EG, Wilder-Smith A. Managing severe yellow fever in the intensive care: lessons learnt from Brazil. J. Travel Med. 26(5), taz043 (2019). • Paper that describes the clinical spectrums of yellow fever.Crossref, Medline, Google Scholar2. Ho YL, Joelsons D, Leite GFC et al. Severe yellow fever in Brazil: clinical characteristics and management. J. Travel Med. 26(5), taz040 (2019). • A study that described the clinical management of severe yellow fever infection.Crossref, Medline, Google Scholar3. Cunha MDP, Duarte-Neto AN, Pour SZ et al. Phylogeographic patterns of the yellow fever virus around the metropolitan region of São Paulo, Brazil, 2016–2019. PLOS Negl. Trop. Dis. 16(9), e0010705 (2022).Crossref, Medline, CAS, Google Scholar4. Rodríguez-Morales AJ, Bonilla-Aldana DK, Suárez JA et al. Yellow fever reemergence in Venezuela - Implications for international travellers and Latin American countries during the COVID-19 pandemic. Travel Med. Infect. Dis. 44, 102192 (2021). • Article on importance of immunization coverage and optimization of surveillance system for populations at risk of yellow fever.Crossref, Medline, CAS, Google Scholar5. Gardner CL, Ryman KD. Yellow fever: a reemerging threat. Clin. Lab. Med. 30(1), 237–260 (2010).Crossref, Medline, Google Scholar6. Gubler DJ. Pandemic yellow fever: a potential threat to global health via travellers. J. Travel Med. 25(1), (2018). •• One of the earliest paper emphasising on the pandemic potential of yellow fever.Crossref, Medline, Google Scholar7. Song R, Guan S, Le
未来病毒学:黄热病:亚洲一定会遇到这种病毒吗?Baijayantimala Mishra, Sutapa Rath, Monalisa Mohanty & Prabhudutta MamidiBaijayantimala Mishra *通讯作者:电话:+91 943 888 4121;电子邮件地址:bmishramicro@gmail.comhttps://orcid.org/0000-0002-2604-6678Department,全印度医学科学研究所,布巴内斯瓦尔,751019,印度奥里萨邦。搜索更多作者的论文,Sutapa Rath https://orcid.org/0000-0002-0790-1448Department,全印度医学科学研究所,布巴内斯瓦尔,751019,印度奥里萨邦。搜索更多作者的论文,Monalisa Mohanty https://orcid.org/0000-0003-3940-1998Department,微生物学。搜索本作者和Prabhudutta Mamidi的更多论文https://orcid.org/0000-0002-0187-571XDepartment,全印度医学科学研究所,布巴内斯瓦尔,751019,奥里萨邦,印度搜索本文作者的更多论文发表在线:2023年9月8日https://doi.org/10.2217/fvl-2023-0128AboutSectionsView文章查看全文pdf /EPUB工具添加到收藏下载CitationsTrack CitationsPermissionsReprints转载分享分享onFacebookTwitterLinkedInRedditEmail查看文章关键词:伊蚊非洲病毒亚洲传播黄热病特别注意的论文已被突出显示为:•感兴趣;有相当大的兴趣参考资料Kallas EG, Wilder-Smith A.重症监护中的重症黄热病管理:从巴西吸取的经验教训。[j] .中华旅游杂志,2016,33(5):559 - 567。•描述黄热病临床谱的论文。Crossref, Medline, Google Scholar2。何玉林,赵志强,李志强,等。巴西严重黄热病:临床特征和管理。[j] .旅游医学,26(5),39(2019)。•一项描述严重黄热病感染临床管理的研究。Crossref, Medline, Google Scholar3。Cunha MDP, Duarte-Neto AN, Pour SZ等。2016-2019年巴西<s:1>圣保罗大都会区黄热病病毒的系统地理格局公共科学图书馆Negl。太。第16(9),e0010705(2022)。Crossref, Medline, CAS, Google Scholar4。Rodríguez-Morales AJ, Bonilla-Aldana DK, Suárez JA等。黄热病在委内瑞拉再次出现- COVID-19大流行期间对国际旅行者和拉丁美洲国家的影响。旅行医学。感染。第44卷,102192(2021)。•关于免疫覆盖和优化黄热病高危人群监测系统的重要性的文章。Crossref, Medline, CAS, Google Scholar5。加德纳CL,莱曼KD。黄热病:再次出现的威胁。中国。实验室。医学杂志,30(1),237-260(2010)。Crossref, Medline, Google Scholar6。Gubler DJ。大流行性黄热病:通过旅行者对全球健康的潜在威胁。旅游医学,25(1),(2018)。••最早强调黄热病大流行潜力的论文之一。Crossref, Medline, Google Scholar7。宋荣,关生,李世生等。黄热病从安哥拉传入中国与疫苗接种延迟或缺乏有关。紧急情况。感染。病案24(7),1383-1386(2018)。Crossref, Medline, CAS, Google Scholar8。联合国儿童基金会。在安哥拉将黄热病病例保持在零。https://www.unicef.org/stories/angola-keeping-yellow-fever-cases-zero•描述和更新安哥拉目前的黄热病情况。谷歌Scholar9。黄热病在亚洲的缺席:历史、假设、媒介传播、亚洲黄热病的可能性和其他谜团。病毒。12(12),1349(2020)。Crossref, Medline, CAS, Google Scholar10。巴拿马运河与黄热病传入亚洲的关系。Tran。论文。Soc。洛德,22,60-100(1903)。•最早描述黄热病从流行地区传播到亚洲可能模式的文章之一。Medline, Google Scholar11。Baker RE, Mahmud AS, Miller IF等。全球变化时代的传染病。微生物学通报,2011(4),393 - 395(2022)。••审查气候变化和其他关键决定因素对新出现和重新出现的传染病的影响。Crossref, Medline, CAS, Google Scholar12。Brent SE, Watts A, Cetron M等。易受黄热病传播影响的全球城市中心之间的国际旅行。世界卫生学报,96(5),343-354B(2018)。Crossref, Medline, Google Scholar13。Blake LE, Garcia-Blanco MA。人类基因变异与19世纪美国黄热病流行期间的死亡率。mBio。5(3), e01253-14(2014)。Crossref, Medline, Google Scholar14。Saron WAA, Rathore APS, Ting L等。黄病毒血清复合体交叉反应性免疫通过激活异源记忆CD4 T细胞起到保护作用。科学通报,4(7),2018,44(6)。Crossref, Medline, Google Scholar15。Rosser JI, Nielsen-Saines K, Saad E, Fuller T. 2017-2018年巴西东南部黄热病病毒再次出现:是什么引发了传播?公共科学图书馆Negl。太。第16(2),e0010133(2022)。
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