Pub Date : 2023-01-01DOI: 10.1016/j.fbr.2023.100313
M. Felipe, R. N. Barbosa, J. Bezerra, C. Souza-Motta
{"title":"Production of kojic acid by Aspergillus species: Trends and applications","authors":"M. Felipe, R. N. Barbosa, J. Bezerra, C. Souza-Motta","doi":"10.1016/j.fbr.2023.100313","DOIUrl":"https://doi.org/10.1016/j.fbr.2023.100313","url":null,"abstract":"","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"1 1","pages":""},"PeriodicalIF":6.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"54683315","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.1016/j.fbr.2023.100313
Maria Tamara de Caldas Felipe , Renan do Nascimento Barbosa , Jadson Diogo Pereira Bezerra , Cristina Maria de Souza-Motta
{"title":"Production of kojic acid by Aspergillus species: Trends and applications","authors":"Maria Tamara de Caldas Felipe , Renan do Nascimento Barbosa , Jadson Diogo Pereira Bezerra , Cristina Maria de Souza-Motta","doi":"10.1016/j.fbr.2023.100313","DOIUrl":"https://doi.org/10.1016/j.fbr.2023.100313","url":null,"abstract":"","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"45 ","pages":""},"PeriodicalIF":6.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49884994","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.1016/j.fbr.2023.100318
Qin-Rong Tan , Xiang-dong Li
{"title":"Fungal myosin-1 homologs as key molecular motors at the membrane–cytoskeleton interface","authors":"Qin-Rong Tan , Xiang-dong Li","doi":"10.1016/j.fbr.2023.100318","DOIUrl":"https://doi.org/10.1016/j.fbr.2023.100318","url":null,"abstract":"","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"45 ","pages":""},"PeriodicalIF":6.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49885055","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.1016/j.fbr.2023.100326
Ifunanya R. Akaniro , Ikenna V. Chibuike , Emmanuel C. Onwujekwe , Francis A. Gbadamosi , Deborah O. Enyi , Oge N. Onwe
{"title":"Penicillium species as chassis for biomanufacturing and environmental sustainability in the modern era: Progress, challenges, and future perspective","authors":"Ifunanya R. Akaniro , Ikenna V. Chibuike , Emmanuel C. Onwujekwe , Francis A. Gbadamosi , Deborah O. Enyi , Oge N. Onwe","doi":"10.1016/j.fbr.2023.100326","DOIUrl":"https://doi.org/10.1016/j.fbr.2023.100326","url":null,"abstract":"","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"46 ","pages":""},"PeriodicalIF":6.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49861238","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01DOI: 10.1016/j.fbr.2023.100329
Mathew Andrew Harris , Bernard Slippers , Martin Kemler , Michelle Greve
{"title":"Opportunities for diversified usage of metabarcoding data for fungal biogeography through increased metadata quality","authors":"Mathew Andrew Harris , Bernard Slippers , Martin Kemler , Michelle Greve","doi":"10.1016/j.fbr.2023.100329","DOIUrl":"https://doi.org/10.1016/j.fbr.2023.100329","url":null,"abstract":"","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"46 ","pages":""},"PeriodicalIF":6.0,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49861236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-01DOI: 10.1016/j.fbr.2022.06.002
Mao-Qiang He , Mei-Qi Wang , Zuo-Hong Chen , Wang-Qiu Deng , Tai-Hui Li , Alfredo Vizzini , Rajesh Jeewon , Kevin D. Hyde , Rui-Lin Zhao
Mushrooms have long been considered as delicacies as well as used as important dietary supplements and food. However, there are major concerns with poisonous mushrooms as these pose threats to public health and safety. In this paper, we provide a review focusing on poisonous mushrooms, their toxins, symptoms and utilizations. In addition, this paper establishes a poisonous mushroom list which includes 643 species from two phyla, 16 orders, 51 families and 148 genera. The toxicity of all these species was verified and 332 species were ranked as P1 signifying that these species have toxic studies and or clinical poisoning case records and 311 species were P2 meaning they had previously been recorded as poisonous in other studies. Furthermore, we discuss advances in technology including how genomic studies could be used as a breakthrough tool in the field of toxic mushrooms. With this comprehensive review, we aim to promote public awareness of poisonous mushrooms, including how to avoid mushroom poisoning, and how to better utilize poisonous mushroom resources.
{"title":"Potential benefits and harms: a review of poisonous mushrooms in the world","authors":"Mao-Qiang He , Mei-Qi Wang , Zuo-Hong Chen , Wang-Qiu Deng , Tai-Hui Li , Alfredo Vizzini , Rajesh Jeewon , Kevin D. Hyde , Rui-Lin Zhao","doi":"10.1016/j.fbr.2022.06.002","DOIUrl":"10.1016/j.fbr.2022.06.002","url":null,"abstract":"<div><p>Mushrooms have long been considered as delicacies as well as used as important dietary supplements and food. However, there are major concerns with poisonous mushrooms as these pose threats to public health and safety. In this paper, we provide a review focusing on poisonous mushrooms, their toxins, symptoms and utilizations. In addition, this paper establishes a poisonous mushroom list which includes 643 species from two phyla, 16 orders, 51 families and 148 genera. The toxicity of all these species was verified and 332 species were ranked as P1 signifying that these species have toxic studies and or clinical poisoning case records and 311 species were P2 meaning they had previously been recorded as poisonous in other studies. Furthermore, we discuss advances in technology including how genomic studies could be used as a breakthrough tool in the field of toxic mushrooms. With this comprehensive review, we aim to promote public awareness of poisonous mushrooms, including how to avoid mushroom poisoning, and how to better utilize poisonous mushroom resources.</p></div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"42 ","pages":"Pages 56-68"},"PeriodicalIF":6.0,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47946366","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-01DOI: 10.1016/j.fbr.2022.04.002
Soumitra Paloi , Janet Jennifer Luangsa-ard , Wuttichai Mhuantong , Marc Stadler , Noppol Kobmoo
Intragenomic variation is the molecular variation within the genome among repetitive DNA. As a multigene family, nuclear ribosomal DNA (rDNA) has been widely used in fungal taxonomy for their ease in amplification and suitable variability to attain various levels of taxonomic resolution. At the intraspecific level, rDNA is believed to be under concerted evolution and the internal transcribed spacers (ITS) region is actually accepted as a universal barcoding marker for fungi. However, documentation of intragenomic variation of rDNA indicated that it can be problematic in species delimitation and identification. Fungal taxonomic studies have not generally taken into account the intragenomic variation of rDNA in a systematic manner. In this review, our objective is to address the definition, the origin and the mechanisms for maintenance of intragenomic variation, as well as its implication in the domain of fungal molecular taxonomy, particularly for species delimitation, identification and DNA barcoding. With advanced sequencing technologies (second and third generations), we also addressed how these technologies can be used to study the intragenomic variation of rDNA and also how the intragenomic variation will impact on DNA barcoding via high-throughput sequencing.
{"title":"Intragenomic variation in nuclear ribosomal markers and its implication in species delimitation, identification and barcoding in fungi","authors":"Soumitra Paloi , Janet Jennifer Luangsa-ard , Wuttichai Mhuantong , Marc Stadler , Noppol Kobmoo","doi":"10.1016/j.fbr.2022.04.002","DOIUrl":"10.1016/j.fbr.2022.04.002","url":null,"abstract":"<div><p>Intragenomic variation is the molecular variation within the genome among repetitive DNA. As a multigene family, nuclear ribosomal DNA (rDNA) has been widely used in fungal taxonomy for their ease in amplification and suitable variability to attain various levels of taxonomic resolution. At the intraspecific level, rDNA is believed to be under concerted evolution and the internal transcribed spacers (ITS) region is actually accepted as a universal barcoding marker for fungi. However, documentation of intragenomic variation of rDNA indicated that it can be problematic in species delimitation and identification. Fungal taxonomic studies have not generally taken into account the intragenomic variation of rDNA in a systematic manner. In this review, our objective is to address the definition, the origin and the mechanisms for maintenance of intragenomic variation, as well as its implication in the domain of fungal molecular taxonomy, particularly for species delimitation, identification and DNA barcoding. With advanced sequencing technologies (second and third generations), we also addressed how these technologies can be used to study the intragenomic variation of rDNA and also how the intragenomic variation will impact on DNA barcoding via high-throughput sequencing.</p></div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"42 ","pages":"Pages 1-33"},"PeriodicalIF":6.0,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1749461322000239/pdfft?md5=8a4023ccc8be6bf09eea91b3a796a185&pid=1-s2.0-S1749461322000239-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43257122","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-01DOI: 10.1016/j.fbr.2022.06.003
Uriel Perin Kinskovski , Charley Christian Staats
Nutritional immunity is one of the strategies employed by the host to combat invading pathogens. It consists of actively controlling micronutrient bioavailability in the site of infection to hinder microbial growth. The role of manganese in cell biology and nutritional immunity for bacterial pathogens is well understood, but data regarding fungi are still limited. Fungi have evolved complex regulatory systems to acquire, distribute, and utilize manganese. Therefore, the disruption of manganese homeostasis in pathogenic fungi may lead to severe phenotypes and impact virulence. Because the host presents tools for manganese sequestration, and this condition can reduce the growth of important fungal pathogens such as Candida albicans, Aspergillus fumigatus, and Cryptococcus neoformans, it is feasible to suppose that manganese nutritional immunity could play an important role in fungal infections. However, direct evidence is still lacking, and little is known about manganese homeostasis, nutritional immunity, and specific adaptations in individual species of fungal pathogens. In this opinion, we present the current body of knowledge about these subjects, arguing about manganese importance in host–pathogen interactions.
{"title":"Manganese and fungal pathogens: Metabolism and potential association with virulence","authors":"Uriel Perin Kinskovski , Charley Christian Staats","doi":"10.1016/j.fbr.2022.06.003","DOIUrl":"10.1016/j.fbr.2022.06.003","url":null,"abstract":"<div><p><span><span><span>Nutritional immunity is one of the strategies employed by the host to combat invading pathogens. It consists of actively controlling micronutrient bioavailability in the site of infection to hinder microbial growth. The role of manganese in cell biology and nutritional immunity for bacterial pathogens is well understood, but data regarding fungi are still limited. Fungi have evolved complex regulatory systems to acquire, distribute, and utilize manganese. Therefore, the disruption of manganese </span>homeostasis in </span>pathogenic fungi may lead to severe phenotypes and impact virulence. Because the host presents tools for manganese sequestration, and this condition can reduce the growth of important fungal pathogens such as </span><span><em>Candida albicans</em></span>, <span><em>Aspergillus fumigatus</em></span>, and <span><em>Cryptococcus neoformans</em><em>,</em></span> it is feasible to suppose that manganese nutritional immunity could play an important role in fungal infections. However, direct evidence is still lacking, and little is known about manganese homeostasis, nutritional immunity, and specific adaptations in individual species of fungal pathogens. In this opinion, we present the current body of knowledge about these subjects, arguing about manganese importance in host–pathogen interactions.</p></div>","PeriodicalId":12563,"journal":{"name":"Fungal Biology Reviews","volume":"42 ","pages":"Pages 69-73"},"PeriodicalIF":6.0,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"45403091","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}