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Biological-degradation, lignin performance and physical-chemical characteristics of historical wood in an ancient tomb 古墓中历史木材的生物降解、木质素性能及理化特性
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-22 DOI: 10.1016/j.funbio.2025.101588
Akbar Mastouri , Davood Efhamisisi , Martin Lexa , Reza Oladi , Alireza Gholinejad-Pirbazari , Hossein Torabi , Aleš Zeidler , Mariaenrica Frigione
Biodeterioration assessments of archaeological woods, also comparisons with recent wood, provides an effective strategy for its conservation in cultural-heritage. This research aimed to analyze some wooden structures of an ancient tomb, situated in West-Azerbaijan province of Iran adjacent to Lake-Urmia. The anatomical characteristics of historical wood (HW) was investigated to identify species and trace xylem micro-morphological variations in detail. Chemical-changes of deteriorated wood were examined using X-ray diffraction (XRD) and ATR-FTIR spectroscopy, and its wood–water interactions were compared with the recent new-wood. Macro/micro-morphological and mycological assessment of historical poplar wood (Populus alba) confirmed signs of soft-rot fungi, and recent attacks by wood–boring (Xylophagous) insects probably due to local climate-change. Type-I microcavities and advanced soft-rot decay caused cell-walls depletion or deformation, which was visually observed in HW by discoloration and transverse-cracks. Based on Optical- and SEM-microscopy, lignin preservation was observed in the middle-lamella and especially the vessels rich in guaiacyl-lignin (G-type) units. However, the fiber walls were susceptible to fungal degradation due to syringyl-lignin (S-type). Histochemical changes increased the porosity, hygroscopicity, and especially water-absorption (1h–720h) of HW compared to the corresponding new-wood, introducing the severity of damage and treatability criteria for conservationists. Lignin increment, loss of cellulose-crystallinity in XRD (70.5 to 59.9 %) and FTIR ratios (1280/1200, 1317/1336), and also preferential-degradation of polysaccharides were confirmed through chemical analyses of soft-rot decayed wood. These findings, in addition to helping monitor potential risks of wooden artifacts, especially non-durable species, facilitate preventive and protective management of archaeological-heritage in both wet and dry environments.
对考古木材进行生物退化评估,并与最近的木材进行比较,为其在文化遗产中的保护提供了有效的策略。这项研究旨在分析位于伊朗西阿塞拜疆省乌尔米亚湖附近的一座古墓的一些木结构。研究了历史木材(HW)的解剖特征,详细鉴定了树种和木质部的微形态变化。利用x射线衍射(XRD)和ATR-FTIR光谱分析了变质木材的化学变化,并与新木材进行了木水相互作用比较。历史杨木(Populus alba)的宏观/微观形态学和真菌学评估证实了软腐真菌的迹象,以及最近可能由于当地气候变化而受到蛀木(Xylophagous)昆虫的攻击。i型微腔和晚期软腐腐烂导致细胞壁耗损或变形,这在HW中可以通过变色和横向裂纹直观地观察到。光学显微镜和扫描电镜观察到木质素保存在中间薄片中,特别是富含愈创木酰基木质素(g型)单位的血管中。然而,由于丁香基木质素(s型)的存在,纤维壁容易被真菌降解。与相应的新木材相比,HW的组织化学变化增加了孔隙度、吸湿性,尤其是吸水率(1h-720h),为保护主义者介绍了损害的严重程度和可处理性标准。通过对软腐木的化学分析,证实了木质素增加、纤维素结晶度损失(XRD值为70.5 ~ 59.9%)和FTIR值(1280/1200、1317/1336)以及多糖的优先降解。这些发现除了有助于监测木制文物,特别是非耐用物种的潜在风险外,还有助于在潮湿和干燥环境中对考古遗产进行预防性和保护性管理。
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引用次数: 0
Epidemiology and genetic characterization of Alternaria alternata causing leaf spot in Fragaria × ananassa 黄花菜叶斑病的流行病学及遗传特征
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-22 DOI: 10.1016/j.funbio.2025.101589
Nasir Mehmood , Abid Riaz , Salman Ghuffar , Sadaf Anwaar , Nyla Jabeen , Isha Shaheen , Muhammad Qasim , Salma Saeed Khan , Muhammad Rauf , Tauseef Anwar , Huma Qureshi , Ghadah Salim Abusalim , Wajid Zaman , Mohammad Javed Ansari , Rashid Iqbal
Alternaria leaf spot (ALS), caused by Alternaria alternata, is a major disease threatening strawberry (Fragaria × ananassa) production globally, including in Pakistan. This study investigated the incidence and prevalence of ALS in key strawberry-producing regions of Pakistan and characterized the pathogen using morphological and molecular techniques. Surveys were conducted during the 2014–2015 and 2015–2016 seasons across 182 farms in Punjab, Khyber Pakhtunkhwa, and Islamabad. Disease prevalence was 100% across all regions, with incidence rates ranging from 17.25% in cooler Islamabad to 55% in Mardan, KPK. Pathogenicity tests confirmed A. alternata as the causal agent. Morphological traits and sequencing of the ITS and endoPG genes further validated its identity. Phylogenetic analysis showed close genetic relatedness to known A. alternata isolates. This is the first comprehensive report of ALS in strawberries in Pakistan, confirming A. alternata as the primary pathogen. The widespread occurrence and high incidence highlight the urgent need for effective control measures. Integrated disease management, including resistant cultivars and targeted fungicide use, is strongly recommended. Further research should investigate environmental factors influencing disease spread and severity to support long-term sustainable management of ALS in strawberry cultivation.
由互花孢霉(Alternaria alternata)引起的互花孢霉叶斑病(ALS)是威胁全球草莓(Fragaria × ananassa)生产的主要病害,包括巴基斯坦。本研究调查了巴基斯坦主要草莓产区ALS的发病率和流行情况,并利用形态学和分子技术对病原菌进行了鉴定。调查于2014-2015年和2015-2016年在旁遮普省、开伯尔-普赫图赫瓦省和伊斯兰堡的182个农场进行。所有地区的患病率均为100%,发病率从较冷的伊斯兰堡的17.25%到KPK的马尔丹的55%不等。致病性试验证实交替曲霉为致病因子。ITS和endoPG基因的形态特征和测序进一步验证了其身份。系统发育分析表明,该菌株与已知的互花拟南芥分离株遗传亲缘关系密切。这是巴基斯坦草莓ALS的首次综合报道,证实了交替蚜为主要病原菌。广泛性、高发性,迫切需要采取有效的控制措施。强烈建议进行综合病害管理,包括培育抗病品种和有针对性地使用杀菌剂。进一步的研究应探讨影响病害传播和严重程度的环境因素,以支持草莓栽培中ALS的长期可持续管理。
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引用次数: 0
Fungal microbiota in peritoneal dialysis effluent related peritonitis patients by amplicon sequencing of internal transcribed spacer based on Oxford nanopore Technologies 基于牛津纳米孔技术的内部转录间隔子扩增子测序研究腹膜透析出水相关性腹膜炎患者真菌微生物群
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-18 DOI: 10.1016/j.funbio.2025.101587
Suthida Visedthorn , Suwalak Chitcharoen , Pavit Klomkliew , Vorthon Sawaswong , Pavaret Sivapornnukul , Prangwalai Chanchaem , Thunvarat Saejew , Preeyarat Pavatung , Talerngsak Kanjanabuch , Sunchai Payungporn
Fungal peritonitis (FP) is a rare and severe complication resulting from fungal infections of the peritoneum. It has recently garnered increased attention due to rising both incidence and potential mortality. Early recognition and rapid intervention are essential for improving patient outcomes, as untreated FP can progress to sepsis and multi-organ failure if not treated appropriately. Culture-negative fungal peritonitis is commonly observed, and its presence should be further considered. This study aimed to utilize Oxford Nanopore Technologies (ONT) sequencing to investigate the fungal profiles present in peritoneal dialysis effluent (PDE) from patients experiencing PD-related peritonitis, based on internal transcribed spacer (ITS). The results indicated that the ONT was able to identify fungal taxa in 69 out of 104 samples (66.3 %), which included mixed organisms. The predominant phyla identified in the PDE sample were Basidiomycota, followed by Ascomycota and Glomeromycota. Notably, Wallemia was the most frequently detected fungal genus suggesting the fungal thrive in moist environments and can contaminate dialysis system. This observation suggests a possible association with opportunistic infections in immunocompromised individuals, particularly those undergoing peritoneal dialysis. In conclusion, ONT offers a promising approach for fungal taxonomic classification, even though the DNA extracted from the samples was of low abundance.
真菌性腹膜炎是由腹膜真菌感染引起的一种罕见而严重的并发症。由于发病率和潜在死亡率的上升,它最近引起了越来越多的关注。早期识别和快速干预对于改善患者预后至关重要,因为未经治疗的FP如果治疗不当,可能会发展为败血症和多器官衰竭。真菌培养阴性腹膜炎是常见的,其存在应进一步考虑。本研究旨在利用牛津纳米孔技术(ONT)测序,基于内部转录间隔(ITS)研究pd相关性腹膜炎患者腹膜透析流出物(PDE)中存在的真菌谱。结果表明,104份样品中有69份(66.3%)的ONT鉴定出真菌分类群,其中包括混合生物。在PDE样品中鉴定出的优势门是担子菌门,其次是子囊菌门和肾小球菌门。值得注意的是,Wallemia是最常检测到的真菌属,表明真菌在潮湿环境中繁殖,可以污染透析系统。这一观察结果表明,免疫功能低下的个体,特别是接受腹膜透析的个体,可能与机会性感染有关。总之,尽管从样品中提取的DNA丰度较低,但ONT为真菌分类分类提供了一种很有前途的方法。
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引用次数: 0
Systematic evaluation of fluoride quantification methods identifies an appropriate measurement for studying fungal defluorination of per- and Polyfluoroalkyl substances 对氟定量方法的系统评价确定了一种合适的测量方法,用于研究全氟烷基和多氟烷基物质的真菌脱氟
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-15 DOI: 10.1016/j.funbio.2025.101586
Charles Ayers, Jiwei Zhang
The large-scale manufacturing and disposal of Per- and Polyfluoroalkyl substances (PFASs) are causing global concerns, and investigations are needed to understand their ecological impacts. Saprotrophic fungi are dominant nutrient recyclers in ecosystems, while their roles in transforming PFAS remain largely untapped. Particularly, there is a lack of appropriate means to rapidly measure fluoride anions released by fungal cultures to understand their defluorination (deF) capacities and mechanisms. In this research, we systematically evaluated three prevalent means for quantifying free fluoride anions under cultural conditions of wood decay fungal species. Two spectrophotometric measurings, including one based on the fluoride-catalyzed kinetochromic reaction of Xylenol Orange-Zirconium (XO-Zr4+) and another one based on Alizarin-Lanthanum-Fluoride (Al–La3+-F-) ternary complexone reaction, were successfully adapted to a high-throughput micro-well setup for detecting micromolar-level fluoride, but essential fungal media components pose significant interference to both assays. The third method, relying on the potentiometer and fluoride ion-selective electrode (F-ISE), demonstrated a strong capacity for anti-interferences of fungal nutrients, metabolites, and PFAS, leaving it a most appropriate method to study fungal deF. With F-ISE, we further demonstrated a deF test using a model PFAS, 4,4,4-trifluoro-3-(trifluoromethyl) crotonic acid, and a wood rot fungus Trametes versicolor. Together, our research identifies a reliable fluoride quantification method that can allow assessing fungal cultures for their PFAS-defluorinating phenotypes.
全氟烷基和多氟烷基物质(PFASs)的大规模生产和处置引起了全球关注,需要进行调查以了解其生态影响。腐养真菌是生态系统中主要的养分回收者,而它们在转化PFAS中的作用仍未得到充分开发。特别是,缺乏适当的方法来快速测量真菌培养物释放的氟阴离子,以了解其脱氟能力和机制。在本研究中,我们系统地评估了三种在木材腐烂真菌培养条件下定量游离氟化物阴离子的常用方法。基于氟化物催化的二甲酚橙-锆(XO-Zr4+)动致变色反应和基于茜草精-氟化镧(Al-La3 +- f -)三元络合反应的两种分光光度测定方法成功地适用于高通量微孔装置,用于检测微摩尔水平的氟化物,但必需的真菌培养基成分对两种测定方法都存在显著干扰。第三种方法依靠电位器和氟离子选择电极(F-ISE),显示出很强的抗真菌营养物质、代谢物和PFAS干扰的能力,使其成为研究真菌deF的最合适方法。使用F-ISE,我们进一步演示了使用模型PFAS、4,4,4-三氟-3-(三氟甲基)crotonic酸和木腐真菌Trametes versicolor进行deF测试。总之,我们的研究确定了一种可靠的氟化物定量方法,可以评估真菌培养物的pfas -去氟表型。
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引用次数: 0
Fusarium graminearum and zearalenone in wheat: A water activity–temperature model 小麦赤霉病菌与玉米赤霉烯酮:水分活度-温度模型
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-11 DOI: 10.1016/j.funbio.2025.101572
B. Ingram , S. Marin , E. Kiaitsi , N. Magan , C. Verheecke-Vaessen , C. Cervini , F. Rubio-Lopez , E. Garcia-Cela
Zearalenone (ZEN) is a nonsteroidal estrogenic mycotoxin produced primarily by Fusarium graminearum, posing significant threats to agricultural grain production. When ZEN levels exceed regulatory limits, grains face rejection, and its harmful effects on the female reproductive system raise health concerns. Despite its importance, there is a lack of information on the ecophysiological conditions that promote F. graminearum colonisation and ZEN production in wheat grains. This study aimed to develop and validate predictive models for the growth of F.graminearum and ZEN accumulation in wheat. For this purpose, two strains isolated from wheat were inoculated in agar wheat-based medium supplemented with glycerol to adjust the water activity (aw) to five different values of 0.88, 0.91, 0.94, 0.97 and 0.99. The cultures were incubated at 4, 6, 8.5, 15, 20, 25, 30 and 35 °C, the colony growth was measured daily, and ZEN accumulation assessed at day 10, 20 and 30. To analyse the growth kinetics of F. graminearum, the fungal growth rate (μ) and lag time (λ) were calculated, applying the Cardinal/Rosso, Davey, and Gibson models. These techniques, commonly used in secondary modelling, were enhanced through variable transformation, with the square root transformation yielding optimal results in the Cardinal models. The outcome showed probabilistic model accuracy for growth ranging 65–79 % and ZEN production ranging 45–77 % on internal and external data set. Optimum temperature for ZEN production was 25–30 °C in media and wheat. In wheat, a higher aW was required for both growing (0.92 aw) and ZEN production compared to media (0.90 aw). Probabilities of growth over 80 % were predicted in the range of 0.90–0.95 aw at 16–34 °C after 30 days. In conclusion, to avoid mycotoxin contamination in wheat an aw < 0.89 should be maintained, and temperatures in the range 18–31 °C should be avoided (P < 0.5). The integration of predictive models into decision support systems could assist farmers in identifying pre-harvest contamination risks and in optimising harvesting and drying practices to minimise post-harvest contamination. This study highlights the importance of understanding the ecophysiological profiles of mycotoxigenic species like F. graminearum to mitigate contamination risks and optimise storage conditions in wheat.
玉米赤霉烯酮(ZEN)是一种主要由禾谷镰刀菌(Fusarium graminearum)产生的非甾体雌性真菌毒素,对农业粮食生产构成重大威胁。当ZEN水平超过规定限制时,谷物面临排斥,其对女性生殖系统的有害影响引起了健康问题。尽管它很重要,但关于促进F. graminearum定植和ZEN在小麦籽粒中产生的生态生理条件的信息缺乏。本研究旨在建立和验证小麦禾粒镰刀菌生长和ZEN积累的预测模型。为此,从小麦中分离出的两株菌株接种在添加甘油的琼脂小麦培养基中,调节水分活度(aw)至0.88、0.91、0.94、0.97和0.99五个不同值。在4、6、8.5、15、20、25、30和35℃培养,每天测量菌落生长,并在第10、20和30天评估ZEN积累。采用Cardinal/Rosso、Davey和Gibson模型,计算了F. graminearum的生长速率(μ)和滞后时间(λ)。这些通常用于二次建模的技术,通过变量变换得到增强,在基数模型中使用平方根变换产生最佳结果。结果显示,在内部和外部数据集上,增长的概率模型精度为65 - 79%,ZEN产量为45 - 77%。培养基和小麦生产ZEN的最适温度为25 ~ 30℃。在小麦中,与培养基(0.90 aW)相比,生长(0.92 aW)和ZEN产量都需要更高的aW。在16-34°C条件下,30天后,在0.90-0.95瓦范围内,预计生长概率超过80%。综上所述,为了避免小麦和玉米中的霉菌毒素污染;应保持0.89,并应避免温度在18-31°C范围内(P <;0.5)。将预测模型集成到决策支持系统中可以帮助农民识别收获前的污染风险,并优化收获和干燥做法,以尽量减少收获后的污染。这项研究强调了了解真菌毒素产生物种(如F. graminearum)的生态生理特征对减轻小麦污染风险和优化储存条件的重要性。
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引用次数: 0
Physiological stress tolerance responses of the dung decomposer fungus Mucor circinelloides 粪便分解者真菌毛霉的生理抗逆性响应
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-10 DOI: 10.1016/j.funbio.2025.101575
Mavis A. Acheampong , Breno Pupin , Luciana P. Dias , Maiara P. Santos , Luana O. Bernardes , Michele S. Pinheiro , Paulo C. Ferreira , Aram Mikaelyan , Humberto R. Medina , Alene Alder-Rangel , Drauzio E.N. Rangel
The Mucor circinelloides complex, a group of dung-dwelling fungi, is essential for nutrient cycling and organic matter breakdown. Despite their ecological significance, variations in germination rates and stress tolerance among isolates are not well understood. This study examined four isolates—Cicarelli, Doc Beaver, Papulsa, and Zaina—to assess their germination on various media, including potato dextrose agar (PDA), Czapek (CZA), Sabouraud dextrose agar (SDA), Emerson (EM), and minimal media (MM). The results showed notable differences in germination rates, with CZA and EM promoting the fastest growth. The study also analysed sporangiospore tolerance to UV-B radiation and high temperatures (47 °C), with findings highlighting the role of growth media in stress resistance. Sporangiospores from Cicarelli, Doc Beaver, and Papulsa grown on PDA exhibited greater UV-B tolerance than those on CZA. Conversely, sporangiospores produced on CZA were more heat tolerant than those on PDA. The 12-h survival curve for the Zaina isolate reinforced these findings, showing similar trends in UV-B resilience and heat tolerance. This research demonstrates how growth media influence the environmental stress responses in M. circinelloides, providing insights into the adaptive potential of these fungi.
环状毛霉复合体是一组居住在粪便中的真菌,对养分循环和有机物分解至关重要。尽管具有重要的生态意义,但不同菌株之间的发芽率和胁迫耐受性的差异尚不清楚。本研究检测了4个分离株cicarelli、Doc Beaver、Papulsa和zaina,以评估它们在不同培养基上的萌发情况,包括马铃薯葡萄糖琼脂(PDA)、Czapek (CZA)、Sabouraud葡萄糖琼脂(SDA)、Emerson (EM)和minimal培养基(MM)。结果表明,种子发芽率差异显著,CZA和EM对种子生长的促进作用最大。该研究还分析了孢子对UV-B辐射和高温(47°C)的耐受性,研究结果突出了生长介质在抗逆性中的作用。在PDA上生长的Cicarelli、Doc Beaver和Papulsa孢子对UV-B的耐受性优于CZA。相反,在CZA上产生的孢子管孢子比在PDA上产生的更耐热。Zaina分离物的12小时存活曲线强化了这些发现,显示出类似的UV-B抗逆性和耐热性趋势。本研究展示了生长介质如何影响环孢霉的环境胁迫反应,为这些真菌的适应潜力提供了见解。
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引用次数: 0
Differential global gene transcription of Saccharomyces cerevisiae by zinc sulfate addition under acetic acid stress and identification of novel zinc and stress-responsive genes related to cell wall function 醋酸胁迫下添加硫酸锌对酿酒酵母整体基因转录的影响及与细胞壁功能相关的锌和胁迫应答基因的鉴定
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-09 DOI: 10.1016/j.funbio.2025.101573
Ming-Ming Zhang , Bing Yuan , Yu-Zhen Li , Xiao-Lu Wang , Verawat Champreda , Drauzio Eduardo Naretto Rangel , Xin-Qing Zhao
Zinc sulfate is an important micronutrient for cell metabolism and stress protection. Acetic acid is a common inhibitor present in lignocellulosic hydrolysate, and the addition of zinc sulfate allows yeast cells to better cope with acetic acid stress. In-depth understanding of how zinc sulfate leads to changes in global gene transcription benefits efficient cellulosic ethanol production using robust yeast strains. Here, comparative transcriptomic analyses were performed using budding yeast Saccharomyces cerevisiae grown with and without zinc sulfate supplementation under acetic acid stress. Analysis showed enrichment of functions related to cell wall organization in the differentially expressed genes. Furthermore, we proved that deletion of two zinc-responsive genes, including TPS2 related to trehalose biosynthesis and CHS5 involved in protein export and chitin biosynthesis, respectively, impaired yeast growth under acetic acid stress. Meanwhile, weakened cell wall integrity of S. cerevisiae was observed by TPS2 deletion. Furthermore, overexpression of TPS2 and CHS5 exerted a positive effect on yeast growth under acetic acid stress. These results reveal a novel connection between zinc sulfate-mediated metabolic regulation and cell wall integrity, as well as provide a novel strategy for the development of robust yeast strains for sustainable production of fuel ethanol and bio-based chemicals using lignocellulosic biomass.
硫酸锌是细胞代谢和应激保护的重要微量营养素。醋酸是木质纤维素水解物中常见的抑制剂,添加硫酸锌可以使酵母细胞更好地应对醋酸胁迫。深入了解硫酸锌如何导致全球基因转录的变化,有利于使用健壮的酵母菌株高效地生产纤维素乙醇。本研究采用醋酸胁迫下添加和不添加硫酸锌的出芽酵母酿酒酵母进行转录组学比较分析。分析显示,差异表达基因中细胞壁组织相关功能的富集。此外,我们证明了两个锌响应基因的缺失,包括与海藻糖生物合成相关的TPS2和分别参与蛋白质输出和几丁质生物合成的CHS5,在醋酸胁迫下会损害酵母的生长。同时,通过TPS2缺失观察到酿酒酵母细胞壁完整性减弱。此外,TPS2和CHS5的过表达对醋酸胁迫下酵母生长有积极影响。这些结果揭示了硫酸锌介导的代谢调节与细胞壁完整性之间的新联系,并为利用木质纤维素生物质可持续生产燃料乙醇和生物基化学品的健壮酵母菌株的开发提供了新的策略。
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引用次数: 0
Responses of intestinal fungal community of Entomobrya proxima (Collembola: Entomobryinae) to fertilizer application 邻虫蛾肠道真菌群落对施肥的响应
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-09 DOI: 10.1016/j.funbio.2025.101585
Xinyue Yang, Gang Li, Weiming Xiu
Soil collembolans play a key role in maintaining soil health, with their intestinal fungal community contributing to host physiology through specialized metabolic functions. Despite their ecological importance, how fertilizers affect these fungal community remains unclear. This study investigated the response of the intestinal fungal community in Entomobrya proxima Folsom (E. proxima), a dominant collembolan species in North China farmlands, to organic and inorganic fertilizer application using high-throughput sequencing and qPCR technology. The treatments included control group (CG) with no fertilizer, three different rates organic fertilizer treatments at 1 % (Organic fertilizer treatment 1, O1), 6 % (Organic fertilizer treatment 2, O2) and 10 % (Organic fertilizer treatment 3, O3) and inorganic fertilizer treatments at 1 % (Inorganic fertilizer treatment 1, I1), 4 % (Inorganic fertilizer treatment 2, I2) and 6 % (Inorganic fertilizer treatment 3, I3). The results showed significant variations in intestinal fungal community abundance, with O1 and I3 showing markedly higher levels than CG. Fertilizer application generally reduced the Chao1 (used to characterize species richness) (except I2) and Shannon (used to characterize species diversity and evenness) indices of intestinal fungal community, though it had no notable effect on overall community structure. Ascomycota emerged as the dominant phylum within the fungal community. Organic fertilizer application specifically modified the relative abundance of Microascus and Gibberella, whereas inorganic fertilizer significantly affected Scopulariopsis proportion. Saprotrophy was identified as the primary trophic mode, though increasing inorganic fertilizer application led to a gradual rise in pathotroph-saprotroph-symbiotroph proportion. Functional analysis indicated that dung saprotrophs and undefined saprotrophs predominated, with organic fertilizer reducing animal pathogen abundance while inorganic fertilizer enhanced it proportionally with rates. The microfungus exhibited a clear growth advantage in terms of morphological characteristics. Community assembly was primarily governed by stochastic processes, with drift being the key driver. Compared to CG, dispersal limitation played a more significant role under O1 and I2, while homogeneous and heterogeneous selection became more influential under O2 and O3, respectively. Furthermore, the niche width observed under O1 was significantly broader than that of CG. These findings demonstrated that fertilizer types and rates significantly altered the abundance, diversity, composition, trophic mode, functions and assembly mechanism of intestinal fungal community of E. proxima. In addition, organic fertilizer induced more pronounced changes than inorganic fertilizer, which will highlight previously overlooked impacts of agricultural practices on soil fauna.
土壤藻类在维护土壤健康方面发挥着关键作用,它们的肠道真菌群落通过专门的代谢功能为宿主的生理做出贡献。尽管它们具有重要的生态意义,但肥料如何影响这些真菌群落仍不清楚。本研究利用高通量测序和 qPCR 技术,研究了华北农田中的优势禾本科昆虫 Entomobrya proxima Folsom(E. proxima)的肠道真菌群落对施用有机肥和无机肥的反应。处理包括不施肥的对照组(CG),1%(有机肥处理1,O1)、6%(有机肥处理2,O2)和10%(有机肥处理3,O3)三种不同比例的有机肥处理,以及1%(无机肥处理1,I1)、4%(无机肥处理2,I2)和6%(无机肥处理3,I3)的无机肥处理。结果表明,肠道真菌群落丰度变化很大,O1 和 I3 明显高于 CG。施肥普遍降低了肠道真菌群落的 Chao1 指数(用于表征物种丰富度)(I2 除外)和香农指数(用于表征物种多样性和均匀度),但对整体群落结构没有明显影响。子囊菌门是真菌群落中的主要门类。有机肥料的施用特别改变了小袋菌和吉贝菌的相对丰度,而无机肥料则显著影响了拟囊菌的比例。虽然无机肥料施用量的增加会导致病原菌-半知菌-共生菌比例的逐渐上升,但腐生菌被认为是主要的营养模式。功能分析表明,粪便嗜食者和未定义的嗜食者占主导地位,有机肥降低了动物病原体的丰度,而无机肥料则按比例提高了动物病原体的丰度。从形态特征来看,微真菌具有明显的生长优势。群落组装主要受随机过程的控制,漂移是主要驱动因素。与CG相比,分散限制在O1和I2条件下起着更重要的作用,而在O2和O3条件下,同质选择和异质选择的影响更大。此外,在 O1 条件下观察到的生态位宽度明显大于 CG 条件下的生态位宽度。这些研究结果表明,肥料类型和施肥量极大地改变了E. proxima肠道真菌群落的丰度、多样性、组成、营养模式、功能和组装机制。此外,有机肥料比无机肥料引起的变化更明显,这将凸显农业实践对土壤动物群落的影响以前被忽视了。
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引用次数: 0
Leading developments in basic research on aspergillosis and mucormycosis 在曲霉病和毛霉病的基础研究方面处于领先地位
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-08 DOI: 10.1016/j.funbio.2025.101574
Argha Sarkar , Drauzio E.N. Rangel , Nir Osherov
This editorial presents an overview of notable contributions in basic research on aspergillosis and mucormycosis published between 2022 and 2024. Basic research in aspergillosis saw major advances in the field of genomics brought about by inexpensive whole-genome sequencing of hundreds of isolates. This has deepened our understanding of Aspergillus fumigatus population structure, gene diversity, and the evolution of azole antifungal resistance. Basic research in mucormycosis saw interesting developments in our understanding of the interactions between Rhizopus microsporus and endosymbiotic bacteria that protect it against predatory soil amoeba and increase its virulence in models of infection.
这篇社论概述了2022年至2024年间发表的有关曲霉菌病和粘孢子菌病基础研究的重要成果。曲霉菌病的基础研究在基因组学领域取得了重大进展,对数百个分离菌株进行了廉价的全基因组测序。这加深了我们对烟曲霉菌群结构、基因多样性和唑类抗真菌耐药性进化的了解。在粘孢子虫病的基础研究中,我们对小孢子根瘤菌与内生细菌之间的相互作用有了有趣的了解,这种相互作用保护小孢子根瘤菌免受掠夺性土壤变形虫的侵害,并增强了其在感染模型中的毒力。
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引用次数: 0
Biochemistry of microsclerotia differentiation in entomopathogenic fungi: from stress to colour, and implications for insect biocontrol 昆虫病原真菌微核分化的生物化学:从胁迫到颜色,以及对昆虫生物防治的启示
IF 2.9 3区 生物学 Q2 MYCOLOGY Pub Date : 2025-04-08 DOI: 10.1016/j.funbio.2025.101576
Carla Huarte-Bonnet , Flávia R.S. Paixão , Nicolás Pedrini
Microsclerotia (MS) are compact, pigmented propagules of entomopathogenic fungi that are resistant to desiccation and capable of producing infective conidia, positioning them as promising agents for biological control. The transition from conidia to microsclerotia in liquid media is triggered by oxidative stress and involves intricate signalling pathways that induce a range of cellular and molecular changes, including the activation of antioxidant defence systems, iron signalling, peroxisome biogenesis, and pigmentation. The biochemical processes influenced by MS-specific culture media are crucial for the development of fungal structures that exhibit thermotolerance, resilience, and high conidiogenesis. This review delves into these processes, examining the dynamics of aggregation, the role of reactive oxygen species in metabolic regulation, and the stress responses that drive melanin biosynthesis and, ultimately, MS maturation. Furthermore, a comprehensive overview of the bioinsecticidal activity of MS against arthropod pests, as reported in the literature, is also presented.
微菌丝体(Microsclerotia, MS)是一种致密、着色的昆虫病原真菌繁殖体,具有抗干燥和产生感染性分生孢子的能力,是一种很有前景的生物防治剂。液体培养基中分生孢子向微核的转变是由氧化应激触发的,涉及复杂的信号通路,诱导一系列细胞和分子变化,包括抗氧化防御系统的激活、铁信号传导、过氧化物酶体的生物生成和色素沉着。受ms特异性培养基影响的生化过程对真菌结构的发育至关重要,这些结构具有耐热性、弹性和高分生率。这篇综述深入研究了这些过程,研究了聚集的动力学,活性氧在代谢调节中的作用,以及驱动黑色素生物合成和最终MS成熟的应激反应。此外,还介绍了文献报道的MS对节肢动物害虫的生物杀虫活性的全面概述。
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引用次数: 0
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Fungal biology
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